Cucsa.240810 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.TGGTTAATGGCTTCTTTTGGGCTAGAAAGCCTGTTGTTGTTAATAATGATGGAGAAGCGCGTAAATCGACATCACTTGGTGTAAGAGATTCCTTCATTGTTACTATCTTATGTTATTTCCATTATCTACTAGCTGTTGATCAGTCTGTAACTTGTTCATATTATTTTCATGAATTTTTGCTATTGAATTCTTGGATTACATATATTATTGTGCCTACTTGCAGATTATTCCCTTGGGAACAGGTTCGGATTTTGCAAGAACATTTGGTTGGTAAGTGCACATTACTGCATTGTGCTTTTGTACGATGTGAGACTTTCAATTATCACTTCCTCCATGGGGTTAAGCAAACTTGGTTAACATTCTTTTAATTAGGAATAACAATCCTTTTGAAGCTGTGGACCATATAGCCAAAGGTATCCTTGTTTCACTCTTTTGTCTTCCCCTCTAATTTTTCTGTCGATGAAGTACTGTAAATGGCTCTGTTTGTTTACACAAACATTGCATTACCATTGGTAGTTCATGTAAGATATTCTGCTGGGTTGAGGAACCGAATTGATGTTGAAGTTGTCAATGAAGATAATGGGGAGAATCATTACTTTACAAATGTTGCAGACATTCATTTGTAAGGTTAATCTAAACAGTATCATTGATGCTAACCGACAAACTATGCTAAGTCAAGACATCTAATTATCTTATTGCATGGATCTTTTTGCAGAAGTGCAAAGGCTGGTTCTTATGCTGCTAGATACAAGAAATTTGGAAACTTATGCTATGTGATTGGTGCTTTGCAAGGCTTTATGGGACACCAAATTAGAGATTTTAAGACTAAGGTCAGCGTATAG TGGTTAATGGCTTCTTTTGGGCTAGAAAGCCTGTTGTTGTTAATAATGATGGAGAAGCGCGTAAATCGACATCACTTGGTATTATTCCCTTGGGAACAGGTTCGGATTTTGCAAGAACATTTGGTTGGAATAACAATCCTTTTGAAGCTGTGGACCATATAGCCAAAGTTCATGTAAGATATTCTGCTGGGTTGAGGAACCGAATTGATGTTGAAGTTGTCAATGAAGATAATGGGGAGAATCATTACTTTACAAATGTTGCAGACATTCATTTAAGTGCAAAGGCTGGTTCTTATGCTGCTAGATACAAGAAATTTGGAAACTTATGCTATGTGATTGGTGCTTTGCAAGGCTTTATGGGACACCAAATTAGAGATTTTAAGACTAAGGTCAGCGTATAG TGGTTAATGGCTTCTTTTGGGCTAGAAAGCCTGTTGTTGTTAATAATGATGGAGAAGCGCGTAAATCGACATCACTTGGTATTATTCCCTTGGGAACAGGTTCGGATTTTGCAAGAACATTTGGTTGGAATAACAATCCTTTTGAAGCTGTGGACCATATAGCCAAAGTTCATGTAAGATATTCTGCTGGGTTGAGGAACCGAATTGATGTTGAAGTTGTCAATGAAGATAATGGGGAGAATCATTACTTTACAAATGTTGCAGACATTCATTTAAGTGCAAAGGCTGGTTCTTATGCTGCTAGATACAAGAAATTTGGAAACTTATGCTATGTGATTGGTGCTTTGCAAGGCTTTATGGGACACCAAATTAGAGATTTTAAGACTAAGGTCAGCGTATAG VNGFFWARKPVVVNNDGEARKSTSLGIIPLGTGSDFARTFGWNNNPFEAVDHIAKVHVRYSAGLRNRIDVEVVNEDNGENHYFTNVADIHLSAKAGSYAARYKKFGNLCYVIGALQGFMGHQIRDFKTKVSV*
BLAST of Cucsa.240810 vs. Swiss-Prot
Match: LCKB2_ARATH (Sphingoid long-chain bases kinase 2, mitochondrial OS=Arabidopsis thaliana GN=LCKB2 PE=2 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 1.5e-41 Identity = 83/131 (63.36%), Postives = 104/131 (79.39%), Query Frame = 1
BLAST of Cucsa.240810 vs. TrEMBL
Match: A0A0A0K3Y3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G280850 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.2e-53 Identity = 106/120 (88.33%), Postives = 108/120 (90.00%), Query Frame = 1
BLAST of Cucsa.240810 vs. TrEMBL
Match: M5WZY9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007544mg PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 1.8e-41 Identity = 87/131 (66.41%), Postives = 104/131 (79.39%), Query Frame = 1
BLAST of Cucsa.240810 vs. TrEMBL
Match: B9RDX3_RICCO (Bmru protein, putative OS=Ricinus communis GN=RCOM_1616380 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.5e-40 Identity = 86/130 (66.15%), Postives = 101/130 (77.69%), Query Frame = 1
BLAST of Cucsa.240810 vs. TrEMBL
Match: A0A078CD69_BRANA (BnaA05g05360D protein OS=Brassica napus GN=BnaA05g05360D PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 5.7e-40 Identity = 85/131 (64.89%), Postives = 101/131 (77.10%), Query Frame = 1
BLAST of Cucsa.240810 vs. TrEMBL
Match: A0A067JX76_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14342 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 7.4e-40 Identity = 84/131 (64.12%), Postives = 102/131 (77.86%), Query Frame = 1
BLAST of Cucsa.240810 vs. TAIR10
Match: AT2G46090.1 (AT2G46090.1 Diacylglycerol kinase family protein) HSP 1 Score: 170.2 bits (430), Expect = 8.3e-43 Identity = 83/131 (63.36%), Postives = 104/131 (79.39%), Query Frame = 1
BLAST of Cucsa.240810 vs. NCBI nr
Match: gi|659116624|ref|XP_008458170.1| (PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial isoform X1 [Cucumis melo]) HSP 1 Score: 244.2 bits (622), Expect = 1.3e-61 Identity = 119/130 (91.54%), Postives = 121/130 (93.08%), Query Frame = 1
BLAST of Cucsa.240810 vs. NCBI nr
Match: gi|659116626|ref|XP_008458171.1| (PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial isoform X2 [Cucumis melo]) HSP 1 Score: 223.4 bits (568), Expect = 2.4e-55 Identity = 112/130 (86.15%), Postives = 114/130 (87.69%), Query Frame = 1
BLAST of Cucsa.240810 vs. NCBI nr
Match: gi|778730292|ref|XP_011659752.1| (PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial-like [Cucumis sativus]) HSP 1 Score: 217.2 bits (552), Expect = 1.7e-53 Identity = 106/120 (88.33%), Postives = 108/120 (90.00%), Query Frame = 1
BLAST of Cucsa.240810 vs. NCBI nr
Match: gi|700189172|gb|KGN44405.1| (hypothetical protein Csa_7G280850 [Cucumis sativus]) HSP 1 Score: 217.2 bits (552), Expect = 1.7e-53 Identity = 106/120 (88.33%), Postives = 108/120 (90.00%), Query Frame = 1
BLAST of Cucsa.240810 vs. NCBI nr
Match: gi|645254327|ref|XP_008232990.1| (PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial [Prunus mume]) HSP 1 Score: 176.8 bits (447), Expect = 2.5e-41 Identity = 87/131 (66.41%), Postives = 104/131 (79.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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