Cucsa.240660 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGGGTCAATCTTTTTTTtCTTTCTTTTCTTCACCGTCTTCCTCTATTACACTCCGAGATCAGACGCTGCCTTTGAGCCATTGATAATACATTTCAAAGCTTCTTCCCCACTGAAACCCCTTTTCATTATTTTCCCACAATTTTTTCTCAATTTCCCTGTTTCTGTGTTCTCAGATTGGCGCAATTTCTGTTTTTCTTACGGAACACAAAAATTCTCCCATTATTTAGTAGCGATTATCTTAATTTCTTTTTTTTTtACAAATAACCAATACCCAGATCTGGGTTTTTCATTTGTTTCACTCGTTAATCCTGTTGACCAACATTTGACGATTGATTTAACCCCAAAACTACGTAGCAGTGTCCATTGGCTACTTTATTGGGAACCCTTTTGTTCTTTTGGGTGACCCTTTTGAATTCTCTTTCTCGTCCTGTCAAATTTGGGGGAAAaTCTTTAGTTTGATCGATTAATGGCGGCTTCGAGGAATGTGGGGATGAGGGATGAGGAGAAACTGAAGGAAGATGACTCTCCGACGGCCAAGAAGCCTAAATTTGAAAGGTTTCCATTGACAAAGTGGGAGCTAGCGGCTGCTCTCGGCATCTTCCTTCTCTGCTCCACTGGCCTTGTTTGTGTGTACTTGACAATGCCCTCTGCAGAATACCAGAGCGTTAAGCTCCCACGAACACTTTCGGATCTTCGTGTGCTTAAGTATGTGTTATTCTCTTCGGCCTCTTTTCGTTTAGGAGACATATTACGACATTTTATTGTCTTTTCTCCCCTTGTGCCGTTTAGTATTTTTTAAATCAGTGTTGATTTGTTATGAACTTGGAAGGCAAGCGTTGATTGAGGGTTGCTTTTTTCATCATTTCTTTTATTGTCTGTGGAACAGAATGGGGATGGACATGGTTTGCTGAAGTCACTTTTGAGTATTGAAGGAAGTCGATATCCAAACGGTTATGGGGATCCTGAGGGTGGAATTATGTATAATAGGCTCAGCACCTGTTGGTTGGAGTTGGTTTTGGACTAAAACCAATGCCTACCACTGACATATCGGTTGGTTTTGGTCGGTTGGATTAGTTTCCTGAGTTCTTTTGAACACCCCTAATGTTTGCACTTCTGAAGATGTGGCTTTCTTGCCTACTCAGAATGGATGAGGAACATCTTATAGGTTATTTGTGTGAAATATGATTAAAGGATTTACATAACGTATCATCTTAAGCTTTTGGTTTTGGGAGTAGTTTAATGTGGTAATAGAGTTAGGGGTCCTAAGTCTGAATCGCTCAATCTTTCTTCCCAAATTAATATTGAAAAATGCTTGTTGGGTTTTGTAGTTTATCAAAATGTTCAAGCGGATTATTGTTATCTGTTGGCATTTTGTTCCTGATCAATCTAATTTTTAATGCTTGATTGTTATTGTGCTTTATATCTCTTTTTAATTGTGTTCCAGGGATCTCTTTGCAAATTATGCCAAAAGTCATCCAGCACAATTCATTCTAGGTTATTGCTCTACCTACATATTCATGCAAACATTCATGATTCCTGGAACAATTTTCATGTCATTGCTTGCTGGAGCTCTATTTGGTGTTATCAGAGGCCTTCTATTAGTTGTCTTTAATGCAACGGCTGGGGCATCCTCTTGCTTTTTTCTCTCTAAGTTGATTGGAAGACCTTTAGTTTATTGGATGTGGCCTGAAAAGTTGAAATTGTTCCAGGCAGAGGTACTTATTTACTGTAATTTTTGTTTAAAATTCAATTGCATGGCAGCTCGCTAACCACATCTTATGTTGCTTTTAACTCTTGGCTTCGAGTATCCAGATAGCAAAGCATCGAGAAAAGCTACTCAATTATATGCTCTTTCTTAGGATAACACCAACATTACCAAACCTTTTTATCAACTTGGCTTCACCTATTGTTGACATCCCATTTCATGTTTtCTTCTTGGCAACTTTAATTGGCCTTGTTCCAGCATCCTACATCACAGTCAGAGTAAATTTCTCTCATTGTAGACTTTTAAATGTCTTGTTGGTTTCAGGATTTGTTTTCCCAGTTGTTTTTtGTTTTTCAGTTTTATTTATGTGTTTTTTAGACCGCTTTCCATGTAAATATTGTTGGAGAATACTTGAAATTGAGGAGCTTTTTTTACCCTTGAGAAAGATGGAATACTTGAAGTTTTAATATTGTGAATGCAGTGGAAAGATGGTTGTGTCGTGTCTGATGTATTGGTTGACCTTATCCCTTATATAACTTGGTAATTGAAAGGCATGACACTTATCACATCTTGGATTGTCTGTATATGGTGGTTCTTCACTGAAGACTATAAATCTTCACCTTTTCGTTGACGCAGTCTTTTTTTGTAATTTATTTGATCCATTTATTTATATATAATTTCTTCCCTGTACAAGCACCATATTTGGTGGAAATTTTCCTGACATGGTTACATATGCATGTAGCCTTTTTTtCTTATCTACTTGCAAGATCTTACATTTTCTGCAGTATTCTGTTTCTAAAGCATGTTGAAGAATATATGCTATGATTTGTTTTTCTTCTAGTAGTGAGTTGAAACATATGCAACGTCAAATGTATCTAAGAATATGTATGGGCTAATTAGCTAACTGTTAACTCGTTATCTTTGTTATCAGGCTGGACTTGCACTTGGAGAGCTGAAATCAGTCAAGGATTTATACGATTTCAAAACTTTGTCTGTACTTTTCTTTATTGGCTTTATCTCCATTCTACCTACACTTCTAAAGAGGAAGCGAGTATACGAATGACGGCAAATTTTCAGGGCTCCGTCATTTCTGCCTGAGCCATGTCTATGGATGGCTGCTATTACAGGTCTTTGTATTATGATTTTTTCAGTCTCCTCTAAGTATAATTCTAGAAGTTTTGGAAGGAAAAATTTTCCCCACATTATTTGTACTTATTTCATCTTATGTGCCACCATGGAGTTAGTTGTCTGTTCCAGATTATTTAGTATAGTATAACATCGACCATTTTACAATAGTAGGGGCCTTTTGGCCCACCAACTTCTTTAGTTTTAACTCTCTTTCTCTACGTTTCACTTTTATAAAGAAACTACTTCAAGCACGAACTTCTTAATTCCAGGCTTATTAGCTCTATCCTGTGGGTCAAACCACCCCTTAAGATTTATTACTAGTCAGTAGTCACGAAAGTACTACCTTGGAAGAAATGGCATTTTGTTCGTCTCCTTCGAAGTAAATCTTAACCTTCATTCTGAAAATACTATTTTACCACAATGATGATAACAAAATTCAGTGCTGAAATATGTCATCCGTTTGCATTTGCATTGCACAACACATAGAGCATCGTTTTTGGTCAGATTTGACATTTTGAGTCGCATTTTGTCTAATGTTCTCTGTTGCTTAGTCATCTTATATACCAACTACCTTTTGTTTTCTTGGTTTGTACAGATTGATATTGGTTTCAAATGCTCTGATTGATGATAATACTATACTAGCTGTGGCAATACCGCGTCGATTCAGACGCAAACTGTACCATCAAGCTGTTGTATAGCTCGGATGATACATTCAGAAGATGATTATAGGCAGTTGTTTGGAGGCTTTAAAAaGAAAAAaTAGGTGAAGATATTTTAAATTCACATTAGGAGCTCACTGATTACAATCAATATAGGTTATTTACATTTTATCATAATTTTTTGTTGCATCGTGTATTGAAAACGCATACAGGATCTAAACAGGTTA AGAGGGTCAATCTTTTTTTTCTTTCTTTTCTTCACCGTCTTCCTCTATTACACTCCGAGATCAGACGCTGCCTTTGAGCCATTGATAATACATTTCAAAGCTTCTTCCCCACTGAAACCCCTTTTCATTATTTTCCCACAATTTTTTCTCAATTTCCCTGTTTCTGTGTTCTCAGATTGGCGCAATTTCTGTTTTTCTTACGGAACACAAAAATTCTCCCATTATTTAGTAGCGATTATCTTAATTTCTTTTTTTTTTACAAATAACCAATACCCAGATCTGGGTTTTTCATTTGTTTCACTCGTTAATCCTGTTGACCAACATTTGACGATTGATTTAACCCCAAAACTACGTAGCAGTGTCCATTGGCTACTTTATTGGGAACCCTTTTGTTCTTTTGGGTGACCCTTTTGAATTCTCTTTCTCGTCCTGTCAAATTTGGGGGAAAATCTTTAGTTTGATCGATTAATGGCGGCTTCGAGGAATGTGGGGATGAGGGATGAGGAGAAACTGAAGGAAGATGACTCTCCGACGGCCAAGAAGCCTAAATTTGAAAGGTTTCCATTGACAAAGTGGGAGCTAGCGGCTGCTCTCGGCATCTTCCTTCTCTGCTCCACTGGCCTTGTTTGTGTGTACTTGACAATGCCCTCTGCAGAATACCAGAGCGTTAAGCTCCCACGAACACTTTCGGATCTTCGTGTGCTTAAGGATCTCTTTGCAAATTATGCCAAAAGTCATCCAGCACAATTCATTCTAGGTTATTGCTCTACCTACATATTCATGCAAACATTCATGATTCCTGGAACAATTTTCATGTCATTGCTTGCTGGAGCTCTATTTGGTGTTATCAGAGGCCTTCTATTAGTTGTCTTTAATGCAACGGCTGGGGCATCCTCTTGCTTTTTTCTCTCTAAGTTGATTGGAAGACCTTTAGTTTATTGGATGTGGCCTGAAAAGTTGAAATTGTTCCAGGCAGAGATAGCAAAGCATCGAGAAAAGCTACTCAATTATATGCTCTTTCTTAGGATAACACCAACATTACCAAACCTTTTTATCAACTTGGCTTCACCTATTGTTGACATCCCATTTCATGTTTTCTTCTTGGCAACTTTAATTGGCCTTGTTCCAGCATCCTACATCACAGTCAGAGCTGGACTTGCACTTGGAGAGCTGAAATCAGTCAAGGATTTATACGATTTCAAAACTTTGTCTGTACTTTTCTTTATTGGCTTTATCTCCATTCTACCTACACTTCTAAAGAGGAAGCGAGTATACGAATGACGGCAAATTTTCAGGGCTCCGTCATTTCTGCCTGAGCCATGTCTATGGATGGCTGCTATTACAGATTGATATTGGTTTCAAATGCTCTGATTGATGATAATACTATACTAGCTGTGGCAATACCGCGTCGATTCAGACGCAAACTGTACCATCAAGCTGTTGTATAGCTCGGATGATACATTCAGAAGATGATTATAGGCAGTTGTTTGGAGGCTTTAAAAAGAAAAAATAGGTGAAGATATTTTAAATTCACATTAGGAGCTCACTGATTACAATCAATATAGGTTATTTACATTTTATCATAATTTTTTGTTGCATCGTGTATTGAAAACGCATACAGGATCTAAACAGGTTA ATGGCGGCTTCGAGGAATGTGGGGATGAGGGATGAGGAGAAACTGAAGGAAGATGACTCTCCGACGGCCAAGAAGCCTAAATTTGAAAGGTTTCCATTGACAAAGTGGGAGCTAGCGGCTGCTCTCGGCATCTTCCTTCTCTGCTCCACTGGCCTTGTTTGTGTGTACTTGACAATGCCCTCTGCAGAATACCAGAGCGTTAAGCTCCCACGAACACTTTCGGATCTTCGTGTGCTTAAGGATCTCTTTGCAAATTATGCCAAAAGTCATCCAGCACAATTCATTCTAGGTTATTGCTCTACCTACATATTCATGCAAACATTCATGATTCCTGGAACAATTTTCATGTCATTGCTTGCTGGAGCTCTATTTGGTGTTATCAGAGGCCTTCTATTAGTTGTCTTTAATGCAACGGCTGGGGCATCCTCTTGCTTTTTTCTCTCTAAGTTGATTGGAAGACCTTTAGTTTATTGGATGTGGCCTGAAAAGTTGAAATTGTTCCAGGCAGAGATAGCAAAGCATCGAGAAAAGCTACTCAATTATATGCTCTTTCTTAGGATAACACCAACATTACCAAACCTTTTTATCAACTTGGCTTCACCTATTGTTGACATCCCATTTCATGTTTtCTTCTTGGCAACTTTAATTGGCCTTGTTCCAGCATCCTACATCACAGTCAGAGCTGGACTTGCACTTGGAGAGCTGAAATCAGTCAAGGATTTATACGATTTCAAAACTTTGTCTGTACTTTTCTTTATTGGCTTTATCTCCATTCTACCTACACTTCTAAAGAGGAAGCGAGTATACGAATGA MAASRNVGMRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLLCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRVLKDLFANYAKSHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKLFQAEIAKHREKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGELKSVKDLYDFKTLSVLFFIGFISILPTLLKRKRVYE*
BLAST of Cucsa.240660 vs. Swiss-Prot
Match: Y4958_ARATH (Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 PE=1 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 3.0e-113 Identity = 206/287 (71.78%), Postives = 237/287 (82.58%), Query Frame = 1
BLAST of Cucsa.240660 vs. Swiss-Prot
Match: TM41_DICDI (Transmembrane protein 41 homolog OS=Dictyostelium discoideum GN=DDB_G0275543 PE=3 SV=2) HSP 1 Score: 191.0 bits (484), Expect = 1.6e-47 Identity = 94/238 (39.50%), Postives = 153/238 (64.29%), Query Frame = 1
BLAST of Cucsa.240660 vs. Swiss-Prot
Match: TM41B_CHICK (Transmembrane protein 41B OS=Gallus gallus GN=TMEM41B PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.0e-44 Identity = 88/232 (37.93%), Postives = 142/232 (61.21%), Query Frame = 1
BLAST of Cucsa.240660 vs. Swiss-Prot
Match: TM41B_DANRE (Transmembrane protein 41B OS=Danio rerio GN=tmem41b PE=2 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 3.8e-44 Identity = 98/275 (35.64%), Postives = 159/275 (57.82%), Query Frame = 1
BLAST of Cucsa.240660 vs. Swiss-Prot
Match: TM41B_HUMAN (Transmembrane protein 41B OS=Homo sapiens GN=TMEM41B PE=1 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 3.8e-44 Identity = 87/235 (37.02%), Postives = 143/235 (60.85%), Query Frame = 1
BLAST of Cucsa.240660 vs. TrEMBL
Match: A0A0A0K623_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G273650 PE=4 SV=1) HSP 1 Score: 533.5 bits (1373), Expect = 1.5e-148 Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 1
BLAST of Cucsa.240660 vs. TrEMBL
Match: B9IQJ1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s11320g PE=4 SV=2) HSP 1 Score: 454.9 bits (1169), Expect = 6.8e-125 Identity = 221/266 (83.08%), Postives = 245/266 (92.11%), Query Frame = 1
BLAST of Cucsa.240660 vs. TrEMBL
Match: V7BCT1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G089500g PE=4 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 9.8e-124 Identity = 222/271 (81.92%), Postives = 247/271 (91.14%), Query Frame = 1
BLAST of Cucsa.240660 vs. TrEMBL
Match: U5FSV4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s11730g PE=4 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 1.7e-123 Identity = 216/262 (82.44%), Postives = 243/262 (92.75%), Query Frame = 1
BLAST of Cucsa.240660 vs. TrEMBL
Match: I1NHA4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G175400 PE=4 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 1.7e-123 Identity = 222/271 (81.92%), Postives = 246/271 (90.77%), Query Frame = 1
BLAST of Cucsa.240660 vs. TAIR10
Match: AT4G09580.1 (AT4G09580.1 SNARE associated Golgi protein family) HSP 1 Score: 409.5 bits (1051), Expect = 1.7e-114 Identity = 206/287 (71.78%), Postives = 237/287 (82.58%), Query Frame = 1
BLAST of Cucsa.240660 vs. TAIR10
Match: AT1G71940.2 (AT1G71940.2 SNARE associated Golgi protein family) HSP 1 Score: 384.8 bits (987), Expect = 4.4e-107 Identity = 182/240 (75.83%), Postives = 218/240 (90.83%), Query Frame = 1
BLAST of Cucsa.240660 vs. TAIR10
Match: AT4G17790.1 (AT4G17790.1 SNARE associated Golgi protein family) HSP 1 Score: 317.4 bits (812), Expect = 8.6e-87 Identity = 146/237 (61.60%), Postives = 193/237 (81.43%), Query Frame = 1
BLAST of Cucsa.240660 vs. NCBI nr
Match: gi|449463384|ref|XP_004149414.1| (PREDICTED: uncharacterized membrane protein At4g09580 [Cucumis sativus]) HSP 1 Score: 533.5 bits (1373), Expect = 2.2e-148 Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 1
BLAST of Cucsa.240660 vs. NCBI nr
Match: gi|659124036|ref|XP_008461958.1| (PREDICTED: uncharacterized membrane protein At4g09580-like [Cucumis melo]) HSP 1 Score: 532.3 bits (1370), Expect = 4.8e-148 Identity = 268/270 (99.26%), Postives = 269/270 (99.63%), Query Frame = 1
BLAST of Cucsa.240660 vs. NCBI nr
Match: gi|743915644|ref|XP_011001781.1| (PREDICTED: uncharacterized membrane protein At4g09580-like [Populus euphratica]) HSP 1 Score: 455.7 bits (1171), Expect = 5.7e-125 Identity = 221/261 (84.67%), Postives = 243/261 (93.10%), Query Frame = 1
BLAST of Cucsa.240660 vs. NCBI nr
Match: gi|566240668|ref|XP_002325990.2| (hypothetical protein POPTR_0019s11320g [Populus trichocarpa]) HSP 1 Score: 454.9 bits (1169), Expect = 9.8e-125 Identity = 221/266 (83.08%), Postives = 245/266 (92.11%), Query Frame = 1
BLAST of Cucsa.240660 vs. NCBI nr
Match: gi|743922164|ref|XP_011005160.1| (PREDICTED: uncharacterized membrane protein At4g09580-like [Populus euphratica]) HSP 1 Score: 451.8 bits (1161), Expect = 8.3e-124 Identity = 216/262 (82.44%), Postives = 243/262 (92.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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