Cucsa.239640 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTAGGTCACGCAGGTCAAGTTCACGCCGCCTCTCACCCTCTCGTCTCGGCCTATCATCTCACGCCGTCGTCGCTGTTCAATCGTCTCTCCTTCTCAGTCTCCGGCGGTCATCTCCGATCGTCTCCACTTCTCAGAAGTCTCCGATTGTCGCTCGCGCTTGGCTCTCCCTCACCATTGCGTTGTTGTGTTGCCGCTGGCTACGATACCTTGTTGTGTACAACTCATCCTCGAGGACAGACCAATCGGATTATTTTCTCAAGGTAAATAATTTCGTTTCTACATTGCTGTGAGTGAGGATATATTTTTGCTCCACTTAGAAGTTTTGGATGACATTTATGACCATACTTGAACAAGATCTATTCTATAGATTGGACATCTTATCCTCCTCGAGTTCTTAGAATTTTTGGATGCGTTTTGACTTTGCTTTGGTAGTTCTATCATTTATGGGAGATTGGGGAAAAACCTTAAAACTTATATTTTCCTTGTTCGTTTGTCTTCAAAATTTACATATAAGCACTCTTATTTTCACTTAACATCATACAATCCGACAACCAATATGTCCCCCAACCCGTTTACGCCCCTACTTCACATAATCACTATAAACCCCATGTTTTATTCTTCACATAATCACTCATATATATAATAGTGTGTTGATTTCTTTGCCACTTAAATGGGTCAATCCCATTGATATTAATGGAGTTTTCTCTCCATTTTCCTAAGAGAAGAAACCATGATACATATGGACCTAGGAAAGTGCGTAACTTGGCTTGGCTTGGCTTGGTTGTATGGGTTACAAGCCCAAACTACCAATTCAATGTTAACCTTTGAATCAATTAGTCCCTCCATTCGAATTTCATTCTAAAACATACGCGAACATAGATACAAATCATTAGTACAACTTTATACTTTCCCTAAAATTTAGAATCCTGTCAAATCCTACCTGTTTGGGAGTTGGAGGGCAACTTCTTGCTTTGTTTTTTGCACCCTAACACCGTAACACGGCAGAATCAATTTGAGTTCTCCCACATTCAGGGGTTAATGGGAAAATGGGGTAGATTTTGAAAATAATTAGGAAAAAAaGGATTCTTTAGAAATACATTAGAGAAAATGGGTGATCTTTTTTTTTtttGAATTTTTTACAGAGGGCGTCCGTTGAAGAGACGGAATCCACCCCGTTAGCTTCTTTGCTTTTTTTTTTtCCAACTTATTTTTCTAATTTTGATCGATTTCTTTCTTCCTAACTTTTTtATATAAATTTTTTCCTTTtCCTTTTAAATTGTAATTTATTTTAGTATTGAAATTCTCAGATATTATTTTCTGTGATAAAATGTATTTTGTATTTTtAAAATATTGTGTCTAGTTTATTTCTAGGTTCTAAAATGATATTTtCAATAAAAAAaTGATTATCTTTGAGAAAATTCCGTTTCAATTTGGTTTCAAGATTTCATAAAAaTtAAAAAAAAAaaaGAAAGGAAAGAACCAAACGCGTATTAATTGTGTAAGGTTTTCCAGAATTTTCATCTAGGTTTAGCTCCTTCCCATTGCTTCTCACGGTTGGTTTTCCTGAATAATCTTACACAGTCCAGTTATGGAGGACATAGAGCAACAACACCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGTGTACAGAGGTAAGGAGTTTTATGTTTTTACGTTTTTAAATTTTATCTTCCCAGGATTATATTGGAATAAATGTTCGCCTACCCAAATTGTTAGTGGCAGTAGTAGCAACAAGGTTTTGATTTATAACTTTATGAATTTTGGTAATCTTTATGGTGTGAAAACGTTCAGCACAATTTTTTTtCTTCAATATGCTTGTTTTTGCCTTAACTTAAAGATATTTCTGCTATACAATTGGATTAGTCAGATTCCAATTCTTAGAGGTTTCGATTTTTCCATTTTCAGAAAAATATTTGCGAGATACATGGCCAGTTGTGAAGTCTGCACTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGGTAAGAGTCCATAAACTCCTATACAAAAATGAAAAAGTTTATATAACCTAATGAAGGAATGGCTTCGGTTCTGTTGTTTGAGATATTTCGTAACCAGTTGTAATTCTCACTTCATGTGTTCTGATCTCCCACGTTTGGTCAGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGTTAAACCATGATTTGATTTATTTTATGTTATTTGTTCTTACATGGTAGTTTGAGTCTTTCTTTCACCAATCACGTTAATTGGTATCTTGAATTGTGTTTTTCTGACCATGTTTTTTGTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTGCGCAAGAAGGTCAGTATATTTTACTACATTTTTTTAATTCCAGATTGATTTTATATTCTTTTTCTTTCAAGGCATTTAACTAAGAACTTCTCCATAGTTGATACTTGTAATCCTTTATCCTTGAACATGCTCCAATGTCTGAAGTTCGTCCTATATTCAAGAACTCTATATTTATGCTAACCTACAGAGTTAGCATTTAATCACCTTGCATATGCTATAAGCCTAAGTCTGAAGTTCTTCCTAAATTCAAGAAGTCTACATGGCTTATTATTTTACTGAAAACTGGGAACATTTGGACATAAATTGAAATGTAGATTTTTATTCATTTGATTTGAAGTTGGAAGCCAGTCTGCCATGTTAGAGACTAAGTTTCAGTGTTTTTGTGTGTGTATATGTATCACTATCCATAATGTTAGTAAGTCTGTATTGTGTTACGTAATAATTCTTATGAGGACTACCATTTTTCATGCCAATTAGGATCTTTTGCCATCCTTTCATTTTTTATTATCTGCTTTAGAAAAGCTTGAAATTTGACTTTGACCTGACCTTGATTATGATGCAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGTTCATATAGCTTTTTTGATTGATTTCCAAGCCTACTATGTTTTTCTTACTTTGATAAAGATATCTTAATTTAGGTTTCTTAGATGGAAAATTGTGATTGTCACTTGGTCTACGTTTATATTTTATTTCTTCTCTCTTATCTTTTAATTGTTAATCTTGCACAGGCCCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGTAAGTATATTTTCTTTTGCTTCTTTCCTATCATCTCTTTCAGTTTTTCCTTTTCTGTAGTATTAATTTCGTTCTTGTTACTGGCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGGTCTCTGAGTCTAATTACTGCACATCCTTTTTTGTTATCCCACAATAGCTCTCTGCGTAACTTGGTATATCATGCAGATTCTCATGATGAGGAAAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGTATGCCATTTAGACGTGTACTTATTTGCTGATTTTATTTTGCTAGAACCATGTATTTGTTTTTtACATAAGCGTTCTTTTTATTAGGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCAAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGGTGCTCTAGCTGCCTTTCTATTCCTTGAGGCGCAATTTGTCTATATTTATATTTCAAAAAGCATTTAGGAAAATTATGACAATATAATACATAATAGTTATGATGATCTATTCTTAAAATCATAAAAATAAATGTTGCAAAAAAAGAAaTATGCGACAACATACTAGATACCGTATTTAATAAAAGATAAACTATTCAAGATTTAGGAAGTGCCGACAGTTCATGAAAACATTATTTTATTGTCATCATGACAGTTCTATAGAGGTTAAACGCTGACATATTGTGCATTCTAATTTTTTCTCAATGCATTCATTTAAAGAAGAGTTTTTGACATGCATTTGCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCAGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGACAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGTATACATTGTTTGGCTTCTTGATTCAGCTTATCCAATATGTCAAACATTTTCATTCTTTTTACTACCGTATGTGCTCTAATGCGTTCAGTGATAATTGTTTTACCTCAATTCAGGAGGCACCGAAGCAGGATACAAAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCTAAATCCTTGAAGGTATGGGATTGTATGTGGGGGCTATATGTATATAGCCGTGGATGCGTCAGGGTTTTTTTTtAACTGGAATTGGTTCAATTTGTTTGATAAATTTGTTGCAATTTATATGATCTCGTTGCTTTGCAGGAAAAGGCTAAGGCATTTGGAAAACGAAAAGCTGCGGAAACTATCAATCCGGAAGCTTATATTGCATCATCCAGCGATCGGCCACTTTTCAAGAAGAGATCCAAGACATCGTCGTAGAAGTTGGTAAGTATACTGTGAGGGGAGC GTTAGGTCACGCAGGTCAAGTTCACGCCGCCTCTCACCCTCTCGTCTCGGCCTATCATCTCACGCCGTCGTCGCTGTTCAATCGTCTCTCCTTCTCAGTCTCCGGCGGTCATCTCCGATCGTCTCCACTTCTCAGAAGTCTCCGATTGTCGCTCGCGCTTGGCTCTCCCTCACCATTGCGTTGTTGTGTTGCCGCTGGCTACGATACCTTGTTGTGTACAACTCATCCTCGAGGACAGACCAATCGGATTATTTTCTCAAGTCCAGTTATGGAGGACATAGAGCAACAACACCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGTGTACAGAGAAAAATATTTGCGAGATACATGGCCAGTTGTGAAGTCTGCACTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTGCGCAAGAAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGCCCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGATTCTCATGATGAGGAAAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCAAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCAGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGACAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGAGGCACCGAAGCAGGATACAAAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCTAAATCCTTGAAGGAAAAGGCTAAGGCATTTGGAAAACGAAAAGCTGCGGAAACTATCAATCCGGAAGCTTATATTGCATCATCCAGCGATCGGCCACTTTTCAAGAAGAGATCCAAGACATCGTCGTAGAAGTTGGTAAGTATACTGTGAGGGGAGC ATGGAGGACATAGAGCAACAACACCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGTGTACAGAGAAAAATATTTGCGAGATACATGGCCAGTTGTGAAGTCTGCACTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTGCGCAAGAAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGCCCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGATTCTCATGATGAGGAAAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCAAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCAGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGACAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGAGGCACCGAAGCAGGATACAAAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCTAAATCCTTGAAGGAAAAGGCTAAGGCATTTGGAAAACGAAAAGCTGCGGAAACTATCAATCCGGAAGCTTATATTGCATCATCCAGCGATCGGCCACTTTTCAAGAAGAGATCCAAGACATCGTCGTAG MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAAFVPPKEAPKQDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEAYIASSSDRPLFKKRSKTSS*
BLAST of Cucsa.239640 vs. Swiss-Prot
Match: KRR1_SCHPO (KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mis3 PE=3 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 6.0e-104 Identity = 187/326 (57.36%), Postives = 250/326 (76.69%), Query Frame = 1
BLAST of Cucsa.239640 vs. Swiss-Prot
Match: KRR1_YEASZ (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Zymaflore VL3) GN=KRR1 PE=3 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 7.6e-99 Identity = 181/306 (59.15%), Postives = 233/306 (76.14%), Query Frame = 1
BLAST of Cucsa.239640 vs. Swiss-Prot
Match: KRR1_YEASV (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain VIN 13) GN=KRR1 PE=3 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 7.6e-99 Identity = 181/306 (59.15%), Postives = 233/306 (76.14%), Query Frame = 1
BLAST of Cucsa.239640 vs. Swiss-Prot
Match: KRR1_YEAST (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRR1 PE=1 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 7.6e-99 Identity = 181/306 (59.15%), Postives = 233/306 (76.14%), Query Frame = 1
BLAST of Cucsa.239640 vs. Swiss-Prot
Match: KRR1_YEAS8 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=KRR1 PE=3 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 7.6e-99 Identity = 181/306 (59.15%), Postives = 233/306 (76.14%), Query Frame = 1
BLAST of Cucsa.239640 vs. TrEMBL
Match: A0A0A0K7G6_CUCSA (KRR1 small subunit processome component OS=Cucumis sativus GN=Csa_7G237820 PE=3 SV=1) HSP 1 Score: 763.8 bits (1971), Expect = 9.6e-218 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 1
BLAST of Cucsa.239640 vs. TrEMBL
Match: A0A067DWS9_CITSI (KRR1 small subunit processome component OS=Citrus sinensis GN=CISIN_1g017169mg PE=3 SV=1) HSP 1 Score: 604.4 bits (1557), Expect = 9.8e-170 Identity = 296/365 (81.10%), Postives = 328/365 (89.86%), Query Frame = 1
BLAST of Cucsa.239640 vs. TrEMBL
Match: V4TWL6_9ROSI (KRR1 small subunit processome component OS=Citrus clementina GN=CICLE_v10020638mg PE=3 SV=1) HSP 1 Score: 604.4 bits (1557), Expect = 9.8e-170 Identity = 296/365 (81.10%), Postives = 328/365 (89.86%), Query Frame = 1
BLAST of Cucsa.239640 vs. TrEMBL
Match: A0A059BPA0_EUCGR (KRR1 small subunit processome component OS=Eucalyptus grandis GN=EUGRSUZ_F01461 PE=3 SV=1) HSP 1 Score: 602.1 bits (1551), Expect = 4.8e-169 Identity = 292/380 (76.84%), Postives = 339/380 (89.21%), Query Frame = 1
BLAST of Cucsa.239640 vs. TrEMBL
Match: F6H683_VITVI (KRR1 small subunit processome component OS=Vitis vinifera GN=VIT_03s0091g00320 PE=3 SV=1) HSP 1 Score: 600.5 bits (1547), Expect = 1.4e-168 Identity = 294/378 (77.78%), Postives = 332/378 (87.83%), Query Frame = 1
BLAST of Cucsa.239640 vs. TAIR10
Match: AT5G08420.1 (AT5G08420.1 RNA-binding KH domain-containing protein) HSP 1 Score: 541.6 bits (1394), Expect = 3.9e-154 Identity = 268/384 (69.79%), Postives = 317/384 (82.55%), Query Frame = 1
BLAST of Cucsa.239640 vs. NCBI nr
Match: gi|778725976|ref|XP_004139889.2| (PREDICTED: KRR1 small subunit processome component homolog [Cucumis sativus]) HSP 1 Score: 763.8 bits (1971), Expect = 1.4e-217 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 1
BLAST of Cucsa.239640 vs. NCBI nr
Match: gi|659092569|ref|XP_008447125.1| (PREDICTED: KRR1 small subunit processome component homolog [Cucumis melo]) HSP 1 Score: 741.1 bits (1912), Expect = 9.6e-211 Identity = 372/380 (97.89%), Postives = 376/380 (98.95%), Query Frame = 1
BLAST of Cucsa.239640 vs. NCBI nr
Match: gi|1021549219|ref|XP_016166009.1| (PREDICTED: KRR1 small subunit processome component homolog [Arachis ipaensis]) HSP 1 Score: 609.0 bits (1569), Expect = 5.7e-171 Identity = 299/368 (81.25%), Postives = 326/368 (88.59%), Query Frame = 1
BLAST of Cucsa.239640 vs. NCBI nr
Match: gi|568848510|ref|XP_006478051.1| (PREDICTED: KRR1 small subunit processome component homolog [Citrus sinensis]) HSP 1 Score: 605.5 bits (1560), Expect = 6.3e-170 Identity = 296/365 (81.10%), Postives = 328/365 (89.86%), Query Frame = 1
BLAST of Cucsa.239640 vs. NCBI nr
Match: gi|1012202270|ref|XP_015973528.1| (PREDICTED: KRR1 small subunit processome component homolog [Arachis duranensis]) HSP 1 Score: 605.1 bits (1559), Expect = 8.2e-170 Identity = 297/368 (80.71%), Postives = 325/368 (88.32%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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