Cucsa.239640 (gene) Cucumber (Gy14) v1

NameCucsa.239640
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionKRR1 small subunit processome component
Locationscaffold02046 : 486786 .. 491633 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTAGGTCACGCAGGTCAAGTTCACGCCGCCTCTCACCCTCTCGTCTCGGCCTATCATCTCACGCCGTCGTCGCTGTTCAATCGTCTCTCCTTCTCAGTCTCCGGCGGTCATCTCCGATCGTCTCCACTTCTCAGAAGTCTCCGATTGTCGCTCGCGCTTGGCTCTCCCTCACCATTGCGTTGTTGTGTTGCCGCTGGCTACGATACCTTGTTGTGTACAACTCATCCTCGAGGACAGACCAATCGGATTATTTTCTCAAGGTAAATAATTTCGTTTCTACATTGCTGTGAGTGAGGATATATTTTTGCTCCACTTAGAAGTTTTGGATGACATTTATGACCATACTTGAACAAGATCTATTCTATAGATTGGACATCTTATCCTCCTCGAGTTCTTAGAATTTTTGGATGCGTTTTGACTTTGCTTTGGTAGTTCTATCATTTATGGGAGATTGGGGAAAAACCTTAAAACTTATATTTTCCTTGTTCGTTTGTCTTCAAAATTTACATATAAGCACTCTTATTTTCACTTAACATCATACAATCCGACAACCAATATGTCCCCCAACCCGTTTACGCCCCTACTTCACATAATCACTATAAACCCCATGTTTTATTCTTCACATAATCACTCATATATATAATAGTGTGTTGATTTCTTTGCCACTTAAATGGGTCAATCCCATTGATATTAATGGAGTTTTCTCTCCATTTTCCTAAGAGAAGAAACCATGATACATATGGACCTAGGAAAGTGCGTAACTTGGCTTGGCTTGGCTTGGTTGTATGGGTTACAAGCCCAAACTACCAATTCAATGTTAACCTTTGAATCAATTAGTCCCTCCATTCGAATTTCATTCTAAAACATACGCGAACATAGATACAAATCATTAGTACAACTTTATACTTTCCCTAAAATTTAGAATCCTGTCAAATCCTACCTGTTTGGGAGTTGGAGGGCAACTTCTTGCTTTGTTTTTTGCACCCTAACACCGTAACACGGCAGAATCAATTTGAGTTCTCCCACATTCAGGGGTTAATGGGAAAATGGGGTAGATTTTGAAAATAATTAGGAAAAAAaGGATTCTTTAGAAATACATTAGAGAAAATGGGTGATCTTTTTTTTTtttGAATTTTTTACAGAGGGCGTCCGTTGAAGAGACGGAATCCACCCCGTTAGCTTCTTTGCTTTTTTTTTTtCCAACTTATTTTTCTAATTTTGATCGATTTCTTTCTTCCTAACTTTTTtATATAAATTTTTTCCTTTtCCTTTTAAATTGTAATTTATTTTAGTATTGAAATTCTCAGATATTATTTTCTGTGATAAAATGTATTTTGTATTTTtAAAATATTGTGTCTAGTTTATTTCTAGGTTCTAAAATGATATTTtCAATAAAAAAaTGATTATCTTTGAGAAAATTCCGTTTCAATTTGGTTTCAAGATTTCATAAAAaTtAAAAAAAAAaaaGAAAGGAAAGAACCAAACGCGTATTAATTGTGTAAGGTTTTCCAGAATTTTCATCTAGGTTTAGCTCCTTCCCATTGCTTCTCACGGTTGGTTTTCCTGAATAATCTTACACAGTCCAGTTATGGAGGACATAGAGCAACAACACCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGTGTACAGAGGTAAGGAGTTTTATGTTTTTACGTTTTTAAATTTTATCTTCCCAGGATTATATTGGAATAAATGTTCGCCTACCCAAATTGTTAGTGGCAGTAGTAGCAACAAGGTTTTGATTTATAACTTTATGAATTTTGGTAATCTTTATGGTGTGAAAACGTTCAGCACAATTTTTTTtCTTCAATATGCTTGTTTTTGCCTTAACTTAAAGATATTTCTGCTATACAATTGGATTAGTCAGATTCCAATTCTTAGAGGTTTCGATTTTTCCATTTTCAGAAAAATATTTGCGAGATACATGGCCAGTTGTGAAGTCTGCACTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGGTAAGAGTCCATAAACTCCTATACAAAAATGAAAAAGTTTATATAACCTAATGAAGGAATGGCTTCGGTTCTGTTGTTTGAGATATTTCGTAACCAGTTGTAATTCTCACTTCATGTGTTCTGATCTCCCACGTTTGGTCAGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGTTAAACCATGATTTGATTTATTTTATGTTATTTGTTCTTACATGGTAGTTTGAGTCTTTCTTTCACCAATCACGTTAATTGGTATCTTGAATTGTGTTTTTCTGACCATGTTTTTTGTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTGCGCAAGAAGGTCAGTATATTTTACTACATTTTTTTAATTCCAGATTGATTTTATATTCTTTTTCTTTCAAGGCATTTAACTAAGAACTTCTCCATAGTTGATACTTGTAATCCTTTATCCTTGAACATGCTCCAATGTCTGAAGTTCGTCCTATATTCAAGAACTCTATATTTATGCTAACCTACAGAGTTAGCATTTAATCACCTTGCATATGCTATAAGCCTAAGTCTGAAGTTCTTCCTAAATTCAAGAAGTCTACATGGCTTATTATTTTACTGAAAACTGGGAACATTTGGACATAAATTGAAATGTAGATTTTTATTCATTTGATTTGAAGTTGGAAGCCAGTCTGCCATGTTAGAGACTAAGTTTCAGTGTTTTTGTGTGTGTATATGTATCACTATCCATAATGTTAGTAAGTCTGTATTGTGTTACGTAATAATTCTTATGAGGACTACCATTTTTCATGCCAATTAGGATCTTTTGCCATCCTTTCATTTTTTATTATCTGCTTTAGAAAAGCTTGAAATTTGACTTTGACCTGACCTTGATTATGATGCAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGTTCATATAGCTTTTTTGATTGATTTCCAAGCCTACTATGTTTTTCTTACTTTGATAAAGATATCTTAATTTAGGTTTCTTAGATGGAAAATTGTGATTGTCACTTGGTCTACGTTTATATTTTATTTCTTCTCTCTTATCTTTTAATTGTTAATCTTGCACAGGCCCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGTAAGTATATTTTCTTTTGCTTCTTTCCTATCATCTCTTTCAGTTTTTCCTTTTCTGTAGTATTAATTTCGTTCTTGTTACTGGCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGGTCTCTGAGTCTAATTACTGCACATCCTTTTTTGTTATCCCACAATAGCTCTCTGCGTAACTTGGTATATCATGCAGATTCTCATGATGAGGAAAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGTATGCCATTTAGACGTGTACTTATTTGCTGATTTTATTTTGCTAGAACCATGTATTTGTTTTTtACATAAGCGTTCTTTTTATTAGGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCAAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGGTGCTCTAGCTGCCTTTCTATTCCTTGAGGCGCAATTTGTCTATATTTATATTTCAAAAAGCATTTAGGAAAATTATGACAATATAATACATAATAGTTATGATGATCTATTCTTAAAATCATAAAAATAAATGTTGCAAAAAAAGAAaTATGCGACAACATACTAGATACCGTATTTAATAAAAGATAAACTATTCAAGATTTAGGAAGTGCCGACAGTTCATGAAAACATTATTTTATTGTCATCATGACAGTTCTATAGAGGTTAAACGCTGACATATTGTGCATTCTAATTTTTTCTCAATGCATTCATTTAAAGAAGAGTTTTTGACATGCATTTGCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCAGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGACAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGTATACATTGTTTGGCTTCTTGATTCAGCTTATCCAATATGTCAAACATTTTCATTCTTTTTACTACCGTATGTGCTCTAATGCGTTCAGTGATAATTGTTTTACCTCAATTCAGGAGGCACCGAAGCAGGATACAAAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCTAAATCCTTGAAGGTATGGGATTGTATGTGGGGGCTATATGTATATAGCCGTGGATGCGTCAGGGTTTTTTTTtAACTGGAATTGGTTCAATTTGTTTGATAAATTTGTTGCAATTTATATGATCTCGTTGCTTTGCAGGAAAAGGCTAAGGCATTTGGAAAACGAAAAGCTGCGGAAACTATCAATCCGGAAGCTTATATTGCATCATCCAGCGATCGGCCACTTTTCAAGAAGAGATCCAAGACATCGTCGTAGAAGTTGGTAAGTATACTGTGAGGGGAGC

mRNA sequence

GTTAGGTCACGCAGGTCAAGTTCACGCCGCCTCTCACCCTCTCGTCTCGGCCTATCATCTCACGCCGTCGTCGCTGTTCAATCGTCTCTCCTTCTCAGTCTCCGGCGGTCATCTCCGATCGTCTCCACTTCTCAGAAGTCTCCGATTGTCGCTCGCGCTTGGCTCTCCCTCACCATTGCGTTGTTGTGTTGCCGCTGGCTACGATACCTTGTTGTGTACAACTCATCCTCGAGGACAGACCAATCGGATTATTTTCTCAAGTCCAGTTATGGAGGACATAGAGCAACAACACCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGTGTACAGAGAAAAATATTTGCGAGATACATGGCCAGTTGTGAAGTCTGCACTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTGCGCAAGAAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGCCCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGATTCTCATGATGAGGAAAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCAAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCAGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGACAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGAGGCACCGAAGCAGGATACAAAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCTAAATCCTTGAAGGAAAAGGCTAAGGCATTTGGAAAACGAAAAGCTGCGGAAACTATCAATCCGGAAGCTTATATTGCATCATCCAGCGATCGGCCACTTTTCAAGAAGAGATCCAAGACATCGTCGTAGAAGTTGGTAAGTATACTGTGAGGGGAGC

Coding sequence (CDS)

ATGGAGGACATAGAGCAACAACACCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAGTTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGTGTACAGAGAAAAATATTTGCGAGATACATGGCCAGTTGTGAAGTCTGCACTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTGCGCAAGAAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGCCCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGATTCTCATGATGAGGAAAGAGCTTGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCAAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCAGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGACAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGAGGCACCGAAGCAGGATACAAAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCTAAATCCTTGAAGGAAAAGGCTAAGGCATTTGGAAAACGAAAAGCTGCGGAAACTATCAATCCGGAAGCTTATATTGCATCATCCAGCGATCGGCCACTTTTCAAGAAGAGATCCAAGACATCGTCGTAG

Protein sequence

MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAAFVPPKEAPKQDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEAYIASSSDRPLFKKRSKTSS*
BLAST of Cucsa.239640 vs. Swiss-Prot
Match: KRR1_SCHPO (KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mis3 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 6.0e-104
Identity = 187/326 (57.36%), Postives = 250/326 (76.69%), Query Frame = 1

Query: 1   MEDIEQQHQNKT---KHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLF 60
           M ++E   +N     K+K ++ + KPWD D +ID WK+E F    ++   LE SSF+TLF
Sbjct: 1   MTEVESSTENNVIVNKNK-RYRRDKPWDTD-DIDHWKIEPFTKDDSKESFLEESSFATLF 60

Query: 61  PVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLS 120
           P YREKYLR+ WP V  AL +FGI   L+L+EGSMTV TTRKT DPY I+ ARDLIKLL+
Sbjct: 61  PKYREKYLREVWPHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLA 120

Query: 121 RSVPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYIL 180
           RSVP PQA+KI+ D + CDIIKIGN++R KERFVKRR+ L+G N  TLKALE+LT CYIL
Sbjct: 121 RSVPFPQAVKIMQDGVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYIL 180

Query: 181 VQGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFL 240
           VQG TVA MG +KGLK+VRR+VE+CM N +HP+Y+IK LM+++ELA DP LANE+WDRFL
Sbjct: 181 VQGTTVAVMGGYKGLKEVRRIVEDCMHN-IHPIYHIKELMIKRELAKDPTLANESWDRFL 240

Query: 241 PKFKKKTV-KQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQE 300
           P+FKK+ V ++K  K +  K+YTPFPP Q PS++D+++E+GEYFL +++K  KK  +K+E
Sbjct: 241 PQFKKRNVARRKPAKIRETKEYTPFPPAQPPSKLDLEIESGEYFLKKEEKERKKRAEKKE 300

Query: 301 KQAEKTADNKRKREAAFVPPKEAPKQ 323
           +Q EK  + +++R  AF+PP+E+ K+
Sbjct: 301 QQKEKKKEKEKERMKAFIPPEESSKK 323

BLAST of Cucsa.239640 vs. Swiss-Prot
Match: KRR1_YEASZ (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Zymaflore VL3) GN=KRR1 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.6e-99
Identity = 181/306 (59.15%), Postives = 233/306 (76.14%), Query Frame = 1

Query: 18  HDKPKPWDEDPNIDRWKVEKFDPSWNEAGM--LEVSSFSTLFPVYREKYLRDTWPVVKSA 77
           H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 78  LKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 137
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 138 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 197
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 198 RRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 257
           RRVVE+CM N +HP+Y+IK LM+++ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 258 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAA 317
             KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+  + + +R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 318 FVPPKE 319
           F+ P+E
Sbjct: 305 FIAPEE 308

BLAST of Cucsa.239640 vs. Swiss-Prot
Match: KRR1_YEASV (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain VIN 13) GN=KRR1 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.6e-99
Identity = 181/306 (59.15%), Postives = 233/306 (76.14%), Query Frame = 1

Query: 18  HDKPKPWDEDPNIDRWKVEKFDPSWNEAGM--LEVSSFSTLFPVYREKYLRDTWPVVKSA 77
           H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 78  LKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 137
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 138 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 197
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 198 RRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 257
           RRVVE+CM N +HP+Y+IK LM+++ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 258 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAA 317
             KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+  + + +R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 318 FVPPKE 319
           F+ P+E
Sbjct: 305 FIAPEE 308

BLAST of Cucsa.239640 vs. Swiss-Prot
Match: KRR1_YEAST (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRR1 PE=1 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.6e-99
Identity = 181/306 (59.15%), Postives = 233/306 (76.14%), Query Frame = 1

Query: 18  HDKPKPWDEDPNIDRWKVEKFDPSWNEAGM--LEVSSFSTLFPVYREKYLRDTWPVVKSA 77
           H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 78  LKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 137
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 138 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 197
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 198 RRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 257
           RRVVE+CM N +HP+Y+IK LM+++ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 258 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAA 317
             KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+  + + +R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 318 FVPPKE 319
           F+ P+E
Sbjct: 305 FIAPEE 308

BLAST of Cucsa.239640 vs. Swiss-Prot
Match: KRR1_YEAS8 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=KRR1 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.6e-99
Identity = 181/306 (59.15%), Postives = 233/306 (76.14%), Query Frame = 1

Query: 18  HDKPKPWDEDPNIDRWKVEKFDPSWNEAGM--LEVSSFSTLFPVYREKYLRDTWPVVKSA 77
           H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 78  LKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 137
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 138 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQV 197
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+V
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 198 RRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTV---KQKKVKS 257
           RRVVE+CM N +HP+Y+IK LM+++ELA  P LANE+W RFLP FKK+ V   K KK+++
Sbjct: 185 RRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRN 244

Query: 258 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAA 317
             KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+  + + +R   
Sbjct: 245 VEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKD 304

Query: 318 FVPPKE 319
           F+ P+E
Sbjct: 305 FIAPEE 308

BLAST of Cucsa.239640 vs. TrEMBL
Match: A0A0A0K7G6_CUCSA (KRR1 small subunit processome component OS=Cucumis sativus GN=Csa_7G237820 PE=3 SV=1)

HSP 1 Score: 763.8 bits (1971), Expect = 9.6e-218
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 1

Query: 1   MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60
           MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY
Sbjct: 1   MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60

Query: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120
           REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV
Sbjct: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120

Query: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180
           PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG
Sbjct: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180

Query: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF 240
           NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF
Sbjct: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF 240

Query: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300
           KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Sbjct: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300

Query: 301 KTADNKRKREAAFVPPKEAPKQDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEA 360
           KTADNKRKREAAFVPPKEAPKQDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEA
Sbjct: 301 KTADNKRKREAAFVPPKEAPKQDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDRPLFKKRSKTSS 380
           YIASSSDRPLFKKRSKTSS
Sbjct: 361 YIASSSDRPLFKKRSKTSS 379

BLAST of Cucsa.239640 vs. TrEMBL
Match: A0A067DWS9_CITSI (KRR1 small subunit processome component OS=Citrus sinensis GN=CISIN_1g017169mg PE=3 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 9.8e-170
Identity = 296/365 (81.10%), Postives = 328/365 (89.86%), Query Frame = 1

Query: 13  KHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVV 72
           KHKGKHDKPKPWDEDPNID WKVEKFDP WNE GMLEVSSFSTLFP YREKYL++ WP+V
Sbjct: 12  KHKGKHDKPKPWDEDPNIDHWKVEKFDPFWNEGGMLEVSSFSTLFPQYREKYLQEAWPMV 71

Query: 73  KSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDE 132
           K ALKE+G+  ELNL+EGSMTVSTTRKTRDPYIIVKARDLI+LLSRSVPAPQAIKILDDE
Sbjct: 72  KGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDDE 131

Query: 133 MQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL 192
           MQCDIIKIGNLVR KERFVKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL
Sbjct: 132 MQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL 191

Query: 193 KQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKS 252
           KQVRR+VE+CM NKMHPVY+IKILM++KEL  DPALANENWDRFLPKFKKK VKQKKVKS
Sbjct: 192 KQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKVKS 251

Query: 253 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAA 312
           K KK YTPFPPP QPS+ID  LE+GEYFL+E+KK +KKWQ+KQEKQAEKTA+NKRKR+AA
Sbjct: 252 KEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRKRDAA 311

Query: 313 FVPPKEAPKQDTKPDGDK-NDIAEMAKSLKEKAKAFGKRKAAETINPEAYIASSSDRPLF 372
           F+PP+E  +Q++    DK ND+A MAKSLKEKAK   K+K AE INPE YIA+S ++P  
Sbjct: 312 FIPPEEPSRQNSCEAEDKTNDVAAMAKSLKEKAKKLRKQKFAENINPEEYIAASGEKPSK 371

Query: 373 KKRSK 377
           KK+SK
Sbjct: 372 KKKSK 376

BLAST of Cucsa.239640 vs. TrEMBL
Match: V4TWL6_9ROSI (KRR1 small subunit processome component OS=Citrus clementina GN=CICLE_v10020638mg PE=3 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 9.8e-170
Identity = 296/365 (81.10%), Postives = 328/365 (89.86%), Query Frame = 1

Query: 13  KHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVV 72
           KHKGKHDKPKPWDEDPNID WKVEKFDP WNE GMLEVSSFSTLFP YREKYL++ WP+V
Sbjct: 12  KHKGKHDKPKPWDEDPNIDHWKVEKFDPFWNEGGMLEVSSFSTLFPQYREKYLQEAWPMV 71

Query: 73  KSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDE 132
           K ALKE+G+  ELNL+EGSMTVSTTRKTRDPYIIVKARDLI+LLSRSVPAPQAIKILDDE
Sbjct: 72  KGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDDE 131

Query: 133 MQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL 192
           MQCDIIKIGNLVR KERFVKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL
Sbjct: 132 MQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL 191

Query: 193 KQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKS 252
           KQVRR+VE+CM NKMHPVY+IKILM++KEL  DPALANENWDRFLPKFKKK VKQKKVKS
Sbjct: 192 KQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKVKS 251

Query: 253 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAA 312
           K KK YTPFPPP QPS+ID  LE+GEYFL+E+KK +KKWQ+KQEKQAEKTA+NKRKR+AA
Sbjct: 252 KEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRKRDAA 311

Query: 313 FVPPKEAPKQDTKPDGDK-NDIAEMAKSLKEKAKAFGKRKAAETINPEAYIASSSDRPLF 372
           F+PP+E  +Q++    DK ND+A MAKSLKEKAK   K+K AE INPE YIA+S ++P  
Sbjct: 312 FIPPEEPSRQNSCEAEDKTNDVAAMAKSLKEKAKKLRKQKFAENINPEEYIAASGEKPSK 371

Query: 373 KKRSK 377
           KK+SK
Sbjct: 372 KKKSK 376

BLAST of Cucsa.239640 vs. TrEMBL
Match: A0A059BPA0_EUCGR (KRR1 small subunit processome component OS=Eucalyptus grandis GN=EUGRSUZ_F01461 PE=3 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 4.8e-169
Identity = 292/380 (76.84%), Postives = 339/380 (89.21%), Query Frame = 1

Query: 2   EDIEQQHQ-NKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 61
           E+ EQQ Q  K K KGKHDKPKPWDEDPNID WK+EKF+PSWNE GMLEVSSFSTLFP Y
Sbjct: 4   EEGEQQLQAKKGKTKGKHDKPKPWDEDPNIDHWKIEKFEPSWNEGGMLEVSSFSTLFPQY 63

Query: 62  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 121
           REKYL++ WP+VKSALKE+G+  ELNL+EGSM VSTTRKTRDPYII+KARDLIKLLSRSV
Sbjct: 64  REKYLQEAWPLVKSALKEYGVACELNLVEGSMAVSTTRKTRDPYIIIKARDLIKLLSRSV 123

Query: 122 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 181
           PAPQAIKILDDE+QCDIIKIGNLVR KERFVKRR+ LVGPNSSTLKALEI+TGCYILVQG
Sbjct: 124 PAPQAIKILDDEVQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEIVTGCYILVQG 183

Query: 182 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF 241
           NTVAAMGSFKGLKQVRR+VE+C+ NKMHP+Y+IK+LM++KEL  DPALANENWDRFLPKF
Sbjct: 184 NTVAAMGSFKGLKQVRRIVEDCIQNKMHPLYHIKVLMVKKELERDPALANENWDRFLPKF 243

Query: 242 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 301
           KKK VKQKKVKSK KK YTPFPPPQ PS+ID+QLE+GEYFL++K+KS K+W++KQEKQAE
Sbjct: 244 KKKNVKQKKVKSKEKKPYTPFPPPQPPSKIDLQLESGEYFLSDKRKSEKQWREKQEKQAE 303

Query: 302 KTADNKRKREAAFVPPKEAPKQDT-KPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPE 361
           KTA+NKRKREAAF+PP+E  K+D+ +  GD+ D+A +AKSLK+K K FGK+K+ E INP+
Sbjct: 304 KTAENKRKREAAFMPPEELVKKDSAQAGGDQTDVAAIAKSLKKKVKDFGKQKSIENINPQ 363

Query: 362 AYIASSSDRPLFKKRSKTSS 380
            YIASS ++P  KK  ++ S
Sbjct: 364 TYIASSGEQPSRKKSKRSKS 383

BLAST of Cucsa.239640 vs. TrEMBL
Match: F6H683_VITVI (KRR1 small subunit processome component OS=Vitis vinifera GN=VIT_03s0091g00320 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 1.4e-168
Identity = 294/378 (77.78%), Postives = 332/378 (87.83%), Query Frame = 1

Query: 3   DIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYRE 62
           ++E + + KTKHKGKHDKPKPWD DP+ID WKV+KFDPSWNE GMLEVSSFSTLFP YRE
Sbjct: 7   EVEVERKEKTKHKGKHDKPKPWD-DPSIDHWKVDKFDPSWNEGGMLEVSSFSTLFPQYRE 66

Query: 63  KYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPA 122
           KYL++ WP V+ ALKEFG+  ELNL+EG MTVSTTRKTRDPYII+KARDLIKLLSRSVPA
Sbjct: 67  KYLQEAWPTVRGALKEFGVKSELNLVEGCMTVSTTRKTRDPYIIMKARDLIKLLSRSVPA 126

Query: 123 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 182
           PQAIKIL+DEMQCDIIKIG+LVR KERFVKRR+ LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 127 PQAIKILNDEMQCDIIKIGSLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNT 186

Query: 183 VAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKK 242
           VAAMGSFKGLKQVRRVVE+C+ NKMHPVY+IK LMM++ELA+DPAL NENWDRFLPKFKK
Sbjct: 187 VAAMGSFKGLKQVRRVVEDCIQNKMHPVYHIKTLMMKRELASDPALENENWDRFLPKFKK 246

Query: 243 KTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKT 302
           K VKQKKVKSK KK YTPFPPPQ PS++D+QLE+GEYFL+++KK AKKWQ K EKQAEKT
Sbjct: 247 KNVKQKKVKSKEKKPYTPFPPPQPPSKVDLQLESGEYFLSDQKKFAKKWQQKLEKQAEKT 306

Query: 303 ADNKRKREAAFVPPKEAPKQD-TKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEAY 362
           A+NKRKREAAFVPP E   QD +K   DKND+A MA SLK+KAK FGK+K+ E +NPE Y
Sbjct: 307 AENKRKREAAFVPPMEPMVQDPSKSADDKNDVAAMAMSLKKKAKEFGKQKSLENVNPETY 366

Query: 363 IASSSDRPLFKKRSKTSS 380
           IA+S + P  KKR  + S
Sbjct: 367 IAASGEAPSKKKRKHSKS 383

BLAST of Cucsa.239640 vs. TAIR10
Match: AT5G08420.1 (AT5G08420.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 541.6 bits (1394), Expect = 3.9e-154
Identity = 268/384 (69.79%), Postives = 317/384 (82.55%), Query Frame = 1

Query: 1   MEDIEQQHQN---KTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLF 60
           +E+I  + QN   + K KGKH+KPKPWD+DPNIDRW +EKFDP+WN  GM E S+FSTLF
Sbjct: 4   VEEIAHEEQNIEKREKKKGKHEKPKPWDDDPNIDRWTIEKFDPAWNPTGMTETSTFSTLF 63

Query: 61  PVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLS 120
           P YREKYL++ WP V+SALKE+G+  +LNL+EGSMTVSTTRKTRDPYIIVKARDLIKLLS
Sbjct: 64  PQYREKYLQECWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLS 123

Query: 121 RSVPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYIL 180
           RSVPAPQAIKIL+DE+QCDIIKIGNLVR KERFVKRR+ LVGPNSSTLKALEILT CYIL
Sbjct: 124 RSVPAPQAIKILEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILTNCYIL 183

Query: 181 VQGNTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFL 240
           VQG+TVAAMG FKGLKQ+RR+VE+C+ N MHPVY+IK LMM+KEL  DPALANE+WDRFL
Sbjct: 184 VQGSTVAAMGPFKGLKQLRRIVEDCVQNIMHPVYHIKTLMMKKELEKDPALANESWDRFL 243

Query: 241 PKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEK 300
           P F+KK VKQKK KSK KK YTPFPPPQ PS+ID+QLE+GEYF+++KKKS KKWQ+KQEK
Sbjct: 244 PTFRKKNVKQKKPKSKEKKPYTPFPPPQPPSKIDMQLESGEYFMSDKKKSEKKWQEKQEK 303

Query: 301 QAEKTADNKRKREAAFVPPKEAPKQDT---KPDGDKNDIAEMAKSLKEKAKAFGK-RKAA 360
           Q+EK+ +NKRKR+A+F+PP+E    ++   K +  KNDI E+  SLK K K   K +K  
Sbjct: 304 QSEKSTENKRKRDASFLPPEEPMNNNSNANKSEDGKNDITELTNSLKSKTKELKKQKKTH 363

Query: 361 ETINPEAYIAS-SSDRPLFKKRSK 377
           E +N E YIA  SS      K+SK
Sbjct: 364 ERVNAEEYIAGPSSSADKSSKKSK 387

BLAST of Cucsa.239640 vs. NCBI nr
Match: gi|778725976|ref|XP_004139889.2| (PREDICTED: KRR1 small subunit processome component homolog [Cucumis sativus])

HSP 1 Score: 763.8 bits (1971), Expect = 1.4e-217
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 1

Query: 1   MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60
           MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY
Sbjct: 1   MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60

Query: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120
           REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV
Sbjct: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120

Query: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180
           PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG
Sbjct: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180

Query: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF 240
           NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF
Sbjct: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF 240

Query: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300
           KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Sbjct: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300

Query: 301 KTADNKRKREAAFVPPKEAPKQDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEA 360
           KTADNKRKREAAFVPPKEAPKQDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEA
Sbjct: 301 KTADNKRKREAAFVPPKEAPKQDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDRPLFKKRSKTSS 380
           YIASSSDRPLFKKRSKTSS
Sbjct: 361 YIASSSDRPLFKKRSKTSS 379

BLAST of Cucsa.239640 vs. NCBI nr
Match: gi|659092569|ref|XP_008447125.1| (PREDICTED: KRR1 small subunit processome component homolog [Cucumis melo])

HSP 1 Score: 741.1 bits (1912), Expect = 9.6e-211
Identity = 372/380 (97.89%), Postives = 376/380 (98.95%), Query Frame = 1

Query: 1   MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60
           MEDIEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY
Sbjct: 1   MEDIEQQ-QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60

Query: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120
           REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV
Sbjct: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120

Query: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180
           PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG
Sbjct: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180

Query: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF 240
           NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMM+KELANDPALANENWDRFLPKF
Sbjct: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKF 240

Query: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300
           KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Sbjct: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300

Query: 301 KTADNKRKREAAFVPPKEAPK-QDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPE 360
           KTA+NKRKREAAFVPP EAPK QDT+PDGDKNDIAEMAK LKEKAKAFGKRKAAETINPE
Sbjct: 301 KTAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPE 360

Query: 361 AYIASSSDRPLFKKRSKTSS 380
           AYIASSSD+PLFKKRSKTSS
Sbjct: 361 AYIASSSDQPLFKKRSKTSS 379

BLAST of Cucsa.239640 vs. NCBI nr
Match: gi|1021549219|ref|XP_016166009.1| (PREDICTED: KRR1 small subunit processome component homolog [Arachis ipaensis])

HSP 1 Score: 609.0 bits (1569), Expect = 5.7e-171
Identity = 299/368 (81.25%), Postives = 326/368 (88.59%), Query Frame = 1

Query: 13  KHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVV 72
           K KGKHDKPKPWDEDPNID WKVEKFDPSWNE GMLEVSSFSTLFP YREKYL++ WP+V
Sbjct: 24  KRKGKHDKPKPWDEDPNIDHWKVEKFDPSWNEGGMLEVSSFSTLFPQYREKYLQEAWPLV 83

Query: 73  KSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDE 132
           KSALKEFGI  ELNL+EGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDE
Sbjct: 84  KSALKEFGISCELNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDE 143

Query: 133 MQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL 192
           +QCDIIKI  LVR KERFVKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL
Sbjct: 144 VQCDIIKISGLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL 203

Query: 193 KQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKS 252
           KQVRR+VEECM+NKMHPVYNIK+LM++KEL  DPALA ENWDRFLPKFKKK V+QKKVKS
Sbjct: 204 KQVRRIVEECMLNKMHPVYNIKVLMLKKELEKDPALAQENWDRFLPKFKKKNVQQKKVKS 263

Query: 253 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAA 312
           K KK YTPFPPPQQPS++DI+LETGEYFL+ KKKSAKKWQ+KQEKQAEKTA+NKRKRE A
Sbjct: 264 KEKKPYTPFPPPQQPSKVDIELETGEYFLSAKKKSAKKWQEKQEKQAEKTAENKRKREEA 323

Query: 313 FVPPKEAPK-QDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEAYIASSSDRPLF 372
           F+PPKE  K  D   D + N++A+MAKSLK+KAK  GKRK+ E IN E YI  SS++P  
Sbjct: 324 FIPPKEPAKLVDKSEDANNNNVADMAKSLKQKAKKLGKRKSEENINAETYIIGSSEQPSG 383

Query: 373 KKRSKTSS 380
           KK  K  S
Sbjct: 384 KKSKKQKS 391

BLAST of Cucsa.239640 vs. NCBI nr
Match: gi|568848510|ref|XP_006478051.1| (PREDICTED: KRR1 small subunit processome component homolog [Citrus sinensis])

HSP 1 Score: 605.5 bits (1560), Expect = 6.3e-170
Identity = 296/365 (81.10%), Postives = 328/365 (89.86%), Query Frame = 1

Query: 13  KHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVV 72
           KHKGKHDKPKPWDEDPNID WKVEKFDP WNE GMLEVSSFSTLFP YREKYL++ WP+V
Sbjct: 12  KHKGKHDKPKPWDEDPNIDHWKVEKFDPFWNEGGMLEVSSFSTLFPQYREKYLQEAWPMV 71

Query: 73  KSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDE 132
           K ALKE+G+  ELNL+EGSMTVSTTRKTRDPYIIVKARDLI+LLSRSVPAPQAIKILDDE
Sbjct: 72  KGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDDE 131

Query: 133 MQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL 192
           MQCDIIKIGNLVR KERFVKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL
Sbjct: 132 MQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL 191

Query: 193 KQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKS 252
           KQVRR+VE+CM NKMHPVY+IKILM++KEL  DPALANENWDRFLPKFKKK VKQKKVKS
Sbjct: 192 KQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKVKS 251

Query: 253 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAA 312
           K KK YTPFPPP QPS+ID  LE+GEYFL+E+KK +KKWQ+KQEKQAEKTA+NKRKR+AA
Sbjct: 252 KEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRKRDAA 311

Query: 313 FVPPKEAPKQDTKPDGDK-NDIAEMAKSLKEKAKAFGKRKAAETINPEAYIASSSDRPLF 372
           F+PP+E  +Q++    DK ND+A MAKSLKEKAK   K+K AE INPE YIA+S ++P  
Sbjct: 312 FIPPEEPSRQNSSEAEDKTNDVAAMAKSLKEKAKKLRKQKFAENINPEEYIAASGEKPSK 371

Query: 373 KKRSK 377
           KK+SK
Sbjct: 372 KKKSK 376

BLAST of Cucsa.239640 vs. NCBI nr
Match: gi|1012202270|ref|XP_015973528.1| (PREDICTED: KRR1 small subunit processome component homolog [Arachis duranensis])

HSP 1 Score: 605.1 bits (1559), Expect = 8.2e-170
Identity = 297/368 (80.71%), Postives = 325/368 (88.32%), Query Frame = 1

Query: 13  KHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVV 72
           K KGKHDKPKPWDEDP+ID WKVEKFDPSWNE GMLEVSSFSTLFP YREKYL++ WP+V
Sbjct: 24  KRKGKHDKPKPWDEDPHIDHWKVEKFDPSWNEGGMLEVSSFSTLFPQYREKYLQEAWPLV 83

Query: 73  KSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDE 132
           KSALKEFGI  ELNL+EGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDE
Sbjct: 84  KSALKEFGISCELNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDE 143

Query: 133 MQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL 192
           +QCDIIKI  LVR KERFVKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL
Sbjct: 144 VQCDIIKISGLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGL 203

Query: 193 KQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKFKKKTVKQKKVKS 252
           KQVRR+VEECM+NKMHPVYNIK+LM++KEL  DPALA ENWDRFLPKFKKK V+QKKVKS
Sbjct: 204 KQVRRIVEECMLNKMHPVYNIKVLMLKKELEKDPALAQENWDRFLPKFKKKNVQQKKVKS 263

Query: 253 KPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTADNKRKREAA 312
           K KK YTPFPPPQQPS++DI+LETGEYFL+ KKKSAKKWQ+KQEKQAEKTA+NKRKRE A
Sbjct: 264 KEKKPYTPFPPPQQPSKVDIELETGEYFLSAKKKSAKKWQEKQEKQAEKTAENKRKREEA 323

Query: 313 FVPPKEAPKQ-DTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPEAYIASSSDRPLF 372
           F+PPKE  K  D   D + N++A+MAKSLK+KAK  G RK+ E IN E YI  SS++P  
Sbjct: 324 FIPPKEPAKPVDKSEDANNNNVADMAKSLKQKAKKLGMRKSEENINAETYIIGSSEQPSG 383

Query: 373 KKRSKTSS 380
           KK  K  S
Sbjct: 384 KKSKKQKS 391

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KRR1_SCHPO6.0e-10457.36KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (st... [more]
KRR1_YEASZ7.6e-9959.15KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Zyma... [more]
KRR1_YEASV7.6e-9959.15KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain VIN ... [more]
KRR1_YEAST7.6e-9959.15KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain ATCC... [more]
KRR1_YEAS87.6e-9959.15KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalv... [more]
Match NameE-valueIdentityDescription
A0A0A0K7G6_CUCSA9.6e-218100.00KRR1 small subunit processome component OS=Cucumis sativus GN=Csa_7G237820 PE=3 ... [more]
A0A067DWS9_CITSI9.8e-17081.10KRR1 small subunit processome component OS=Citrus sinensis GN=CISIN_1g017169mg P... [more]
V4TWL6_9ROSI9.8e-17081.10KRR1 small subunit processome component OS=Citrus clementina GN=CICLE_v10020638m... [more]
A0A059BPA0_EUCGR4.8e-16976.84KRR1 small subunit processome component OS=Eucalyptus grandis GN=EUGRSUZ_F01461 ... [more]
F6H683_VITVI1.4e-16877.78KRR1 small subunit processome component OS=Vitis vinifera GN=VIT_03s0091g00320 P... [more]
Match NameE-valueIdentityDescription
AT5G08420.13.9e-15469.79 RNA-binding KH domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|778725976|ref|XP_004139889.2|1.4e-217100.00PREDICTED: KRR1 small subunit processome component homolog [Cucumis sativus][more]
gi|659092569|ref|XP_008447125.1|9.6e-21197.89PREDICTED: KRR1 small subunit processome component homolog [Cucumis melo][more]
gi|1021549219|ref|XP_016166009.1|5.7e-17181.25PREDICTED: KRR1 small subunit processome component homolog [Arachis ipaensis][more]
gi|568848510|ref|XP_006478051.1|6.3e-17081.10PREDICTED: KRR1 small subunit processome component homolog [Citrus sinensis][more]
gi|1012202270|ref|XP_015973528.1|8.2e-17080.71PREDICTED: KRR1 small subunit processome component homolog [Arachis duranensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004088KH_dom_type_1
IPR024166rRNA_assembly_KRR1
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006364 rRNA processing
biological_process GO:0008150 biological_process
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0005730 nucleolus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.239640.1Cucsa.239640.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004088K Homology domain, type 1GENE3DG3DSA:3.30.1370.10coord: 132..208
score: 1.
IPR004088K Homology domain, type 1unknownSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 132..236
score: 2.89
IPR024166Ribosomal RNA assembly KRR1PIRPIRSF006515KRR1coord: 1..354
score: 1.9E
IPR024166Ribosomal RNA assembly KRR1PANTHERPTHR12581HIV-1 REV BINDING PROTEIN 2, 3coord: 4..379
score: 9.6E
NoneNo IPR availablePANTHERPTHR12581:SF0KRR1 SMALL SUBUNIT PROCESSOME COMPONENT HOMOLOGcoord: 4..379
score: 9.6E

The following gene(s) are paralogous to this gene:

None