Cucsa.235640 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.235640
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	scaffold02012 : 217399 .. 220565 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTATTGTCGATGCTGATGTTGTAAATCTTGCCACACAACAGAGCAGTTGGGTGATTGATAGTGGTGCATCAGTTCATGCTACTTCGAAGAGGGAATTTTTTGCATCCTATACTTCTGGTGATTTTGGCAGTGTTAGGATGGGTAATGACAAATCAGCAAATACAATTGGCATCATAGATGTACACTTGAAGAATGAAAATGGTTCTAGGCTGATTTTGAAAAACGTGAAACATATTCCTTATATTCGCATGAACTTGATTTCTACAGGTAAGCTTGATGACAAGGGTTTCTGCAATACCTTTGACAATGGCATATGGAAGCTTACTAAAGGTTCAATGGATATAGCAAAGGGACAAAAATTATCTTCACTGTACTACATGGATGCAAAAATCATAGATTTTGATATAAATACAATGAATGATGAAGCAAATGTTAAGCTTTGGCATAAGAGACTTAGTCATATAAGTGAGAAGGGTTTAAAGATTTTAACAAAAAAAAATCATCTTCCTGATCCAAAGAGTACACCTCTAAAACGGTGTCCTCATTGTCTGGCAGGAAAGCAGACAAGAGTTACCTTTAAATCATCCCAGCATTCAAGGAAGCCAAATGTACTAGAGTTGGTATATTCTGATGTGTGTGGTCCCATGAAAACAAAGTCTCTTGGGGGTGCTTTATATTTTATGACATTTACTGATGATCATTCAAGGAAAATATGAGTTTACACCTTGAAGACTAAAGATCAAGTGTTGCAAGCATTTAAACAGTTTCATGCCTTCGTTGAGAAAGAAACTTGTGAAAATCTCAAGTGTGTTAGAACTGATAATGGAGGTGAGTATTATGGACCTTTTGATGAATATTGTAGAAATCATGACATTCGACATTAAAAGACACCTCCTAAGACACCGTAGTTAAATGGGATAGCTGAAAAATTGAACAGAACATTGGTTGAGAGAGTGAGATGCTTATTATTTGAATCACAGTTGCCACAGTCCTTCTAAGGCAAAACTTTAAATACAGTTGTACATGTTTTGAATTTCACACCATGTGTTCCATTGGGATCGAAAGTTCCAAACAGAATATGGTCAGGTAAGGATATATCTTATAGTCACCTATGTGTCTTTGGTTGTAAAGCTTTTGTTCATGTACCTAAAGATGACATATCAAAGTTTGATGCAAAAACTAAAGCATGTGTGTTTCTTGGTTATGGCCAAGATGAGTTTGGTTATAAATTATATGATCCAGTTAAGAAAAAACTTATAAGAAGTCGAGATGTTGTATTTGTTGAAGACCAAACAATAGCAGACATTGAGAAAATAGCTAAACATAGTGATAATCTAATTGATTTGAGTTCAACCTCTTTGACACAGTCTTCTACACAAATAGAAGATGAGGTTCAAAATAGACAACTTTTTTTACACAAGTGAGAGTTCTGAGCAGGTTTGGACAGAGGATAGAGTTGAAGAACAGTTAGCTGAAACAATTGTTCCTACAGATGTTTCACTCAGGAGATCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAATATGAAGAACATACCTCAAAGACATGTTAAAAAGCAAGATTGGTTGTCAAAGGGTTCAATCAGAAGAAAGGTATCGACTTTGATGAAATTTTTGCTCCAGTTGTCAAGATGTCCTCCATACGTGTTGTTCTGGGTTTGGCAGCCAGTCTTGTCTTAGAGGTTGAGCAGATGGACGTTAAGACTGCTTTTCTTCATGGGGATTTAGACAAAGAAATCTATATGAGAACAACCAGAGGATTTTGAGTAGAAAGGAAAAGAGCATCTGGTGTGTAAATTGAAGAAAAGTCTCTATGGGTTGAAACAGGCACCGAGAAAGTGGTACAAGAAGTTTGAGTCAATTATGGGGGAGCAAGGCTATAGAAAAACTACTTCTGATCACTATGTTTTTTTCCATAAATTTTTTGATGATGATTTTGTTATATTATTACTCTATGATGATGATGATTTTGATTGTTGGCAGGAATGTTTCGAGAATTGATAACTTGAAGAAACAATTGAGCAAATCCTTTGCCATGAAGGATTTGGGGCCAGCAAAGAAAGTTCTTGGAATTCAAATAGTTCAAGACAAAGCATCCAAGGAGTTATACATGTCACCAGAGCAATACATAGAAAGTACTTGAACGTTTCAAGATGAGTCAAGCAAAATCAGTTAGTTCTCCTTTACCCAGTCACTTCAAACTTATCAGTAAACAGAGCCCTTCTACATATAAAGAGAAGGAGGATATGAATAAGGTCCCATATGCTTCAGCAGTTGGAAGCCTAATGTAGTATGTCATGGTATGTACTAGACCTGATATTTCTCATGTTATTGGTGTTGTTAGTCGTTATATGTATAATCCAGGAAAACAACATTGGGAGGCAGTCAAGTGCATCATGAGATATTTGAGAGGTACTTCCAGTTTGAAGCTCACATTTGGGAATGGAAAGCCAATACTTGCAGGTATAATGATTCAGATATGGCAGGGGACTTAGACAGCAAAAGTCTACTTCTGGTTACTTGATGACATTTGCAGGTGGTGCAGTGTTTTGGCAGTCAAGGTTGCAGAAATGTGTTGCCCTTTCTACAACTGAAGCAGAGTATATTGCAGTAGTAGAAACATGTAAAGAGATGTTGTGGATGAAGCGCTTTGTACAAAAGCTTGGCTTCAAGCAACAACGATATGTGATATATTGTGACAATATATTGATAAGAATGCTTTCCTTTGTACAAAAGCTTGGTAAGAATGCTTCATTTCATTCCAGAACAAAGCATATTGATGTGAGATATCAATGGCTTAAAGATGCTTTAAATGATGAATTGTTTGAGCTTGAGAAGATACACACTAATCATAATGAATTTGATATGTTGACAAAGAATCTACCAAGATCGAAGCTTGAGTTTTGTCGTTCCACAGTGGGAATGACAAATTCATCCTCAAAATGA

mRNA sequence

aagtattgtcgatgctgatgttgtaaatcttgccacacaacagagcagttgggtgattgatagtggtgcatcagttcatgctacttcgaagagggaattttttgcatcctatacttctggtgattttggcagtgttaggatgggtaatgacaaatcagcaaatacaattggcatcatagatgtacacttgaagaatgaaaatggttctaggctgattttgaaaaacgtgaaacatattccttatattcgcatgaacttgatttctacaggtaagcttgatgacaagggtttctgcaatacctttgacaatggcatatggaagcttactaaaggttcaatggatatagcaaagggacaaaaattatcttcactgtactacatggatgcaaaaatcatagattttgatataaatacaatgaatgatgaagcaaatgttaagctttggcataagagacttagtcatataagtgagaagggtttaaagattttaacaaaaaaaaatcatcttcctgatccaaagagtacacctctaaaacggtgtcctcattgtctggcaggaaagcagacaagagttacctttaaatcatcccagcattcaaggaagccaaatgtactagagttggtatattctgatgtgtgtggtcccatgaaaacaaagtctcttggggtttacaccttgaagactaaagatcaagtgttgcaagcatttaaacagtttcatgccttcgttgagaaagaaacttgtgaaaatctcaagtgtgttagaactgataatggaggcaaaactttaaatacagttgtacatgttttgaatttcacaccatgtgttccattgggatcgaaagttccaaacagaatatggtcaggtaaggatatatcttatagtcacctatgtgtctttggttgtaaagcttttgttcatgtacctaaagatgacatatcaaagtttgatgcaaaaactaaagcatgtgtgtttcttggttatggccaagatgagtttggttataaattatatgatccagttaagaaaaaacttataagaagtcgagatgttgtatttgttgaagaccaaacaatagcagacattgagaaaatagctaaacatagtgataatctaattgatttgagttcaacctctttgacacagtcttctacacaaatagaagatgaggttcaaaatagacaactttttttacacaaattggttgtcaaagggttcaatcagaagaaaggtatcgactttgatgaaatttttgctccagttgtcaagatgtcctccatacgtgttgttctgggtttggcagccagtcttgtcttagaggttgagcagatggacaaaggaaaagagcatctggtgtgtaaattgaagaaaagtctctatgggttgaaacaggcaccgagaaagtggtacaagaagtttgaGTCAATTATGGGGGAGCAAGGCTATAGAAAAACTACTTCTGATCACTATGTTTTTTTCCATAAATTTTTTGATGATGATTTTaaagtacttgaacgtttcaagatgagtcaagcaaaatcagttagttctcctttacccagtcacttcaaacttatcagtaaacagagcccttctacatataaagagaaggaggatatgaataagtatgtcatggtatgtactagacctgatatttctcatgttattggtgttgttagtcgttatatgtataatccaggaaaacaacattgggaggcagtcaagtgcatcatgagatatttgagaggtacttccagtttgaagctcacatttgggaatggaaagccaatacttgcagGTGGTGCAGTGTTTTGGCAGTCAAGGTTGCAGAAATGTGTTGCCCTTTCTACAACTGAAGCAGAGTATATTGCAGTAGTAGAAACATGTAAAGAGATGTTGTGGATGAAGCGCTTTGTACAAAAGCTTGGCTTCAAGCAACAACGATATGTGATATATTGTGACAATATATTGATAAGAATGCTTTCCTTTGTACAAAAGCTTGGTAAGAATGCTTCATTTCATTCCAGAACAAAGCATATTGATGTGAGATATCAATGGCTTAAAGATGCTTTAAATGATGAATTGTTTGAGCTTGAGAAGATACACACTAATCATAATGAATTTGATATGTTGACAAAGAATCTACCAAGATCGAAGCTTGAGTTTTGTCGTTCCACAGTGGGAATGACAAATTCATCCTCAAAATGA

Coding sequence (CDS)

AAGTATTGTCGATGCTGATGTTGTAAATCTTGCCACACAACAGAGCAGTTGGGTGATTGATAGTGGTGCATCAGTTCATGCTACTTCGAAGAGGGAATTTTTTGCATCCTATACTTCTGGTGATTTTGGCAGTGTTAGGATGGGTAATGACAAATCAGCAAATACAATTGGCATCATAGATGTACACTTGAAGAATGAAAATGGTTCTAGGCTGATTTTGAAAAACGTGAAACATATTCCTTATATTCGCATGAACTTGATTTCTACAGGTAAGCTTGATGACAAGGGTTTCTGCAATACCTTTGACAATGGCATATGGAAGCTTACTAAAGGTTCAATGGATATAGCAAAGGGACAAAAATTATCTTCACTGTACTACATGGATGCAAAAATCATAGATTTTGATATAAATACAATGAATGATGAAGCAAATGTTAAGCTTTGGCATAAGAGACTTAGTCATATAAGTGAGAAGGGTTTAAAGATTTTAACAAAAAAAAATCATCTTCCTGATCCAAAGAGTACACCTCTAAAACGGTGTCCTCATTGTCTGGCAGGAAAGCAGACAAGAGTTACCTTTAAATCATCCCAGCATTCAAGGAAGCCAAATGTACTAGAGTTGGTATATTCTGATGTGTGTGGTCCCATGAAAACAAAGTCTCTTGGGGTTTACACCTTGAAGACTAAAGATCAAGTGTTGCAAGCATTTAAACAGTTTCATGCCTTCGTTGAGAAAGAAACTTGTGAAAATCTCAAGTGTGTTAGAACTGATAATGGAGGCAAAACTTTAAATACAGTTGTACATGTTTTGAATTTCACACCATGTGTTCCATTGGGATCGAAAGTTCCAAACAGAATATGGTCAGGTAAGGATATATCTTATAGTCACCTATGTGTCTTTGGTTGTAAAGCTTTTGTTCATGTACCTAAAGATGACATATCAAAGTTTGATGCAAAAACTAAAGCATGTGTGTTTCTTGGTTATGGCCAAGATGAGTTTGGTTATAAATTATATGATCCAGTTAAGAAAAAACTTATAAGAAGTCGAGATGTTGTATTTGTTGAAGACCAAACAATAGCAGACATTGAGAAAATAGCTAAACATAGTGATAATCTAATTGATTTGAGTTCAACCTCTTTGACACAGTCTTCTACACAAATAGAAGATGAGGTTCAAAATAGACAACTTTTTTTACACAAATTGGTTGTCAAAGGGTTCAATCAGAAGAAAGGTATCGACTTTGATGAAATTTTTGCTCCAGTTGTCAAGATGTCCTCCATACGTGTTGTTCTGGGTTTGGCAGCCAGTCTTGTCTTAGAGGTTGAGCAGATGGACAAAGGAAAAGAGCATCTGGTGTGTAAATTGAAGAAAAGTCTCTATGGGTTGAAACAGGCACCGAGAAAGTGGTACAAGAAGTTTGAGTCAATTATGGGGGAGCAAGGCTATAGAAAAACTACTTCTGATCACTATGTTTTTTTCCATAAATTTTTTGATGATGATTTTAAAGTACTTGAACGTTTCAAGATGAGTCAAGCAAAATCAGTTAGTTCTCCTTTACCCAGTCACTTCAAACTTATCAGTAAACAGAGCCCTTCTACATATAAAGAGAAGGAGGATATGAATAAGTATGTCATGGTATGTACTAGACCTGATATTTCTCATGTTATTGGTGTTGTTAGTCGTTATATGTATAATCCAGGAAAACAACATTGGGAGGCAGTCAAGTGCATCATGAGATATTTGAGAGGTACTTCCAGTTTGAAGCTCACATTTGGGAATGGAAAGCCAATACTTGCAGGTGGTGCAGTGTTTTGGCAGTCAAGGTTGCAGAAATGTGTTGCCCTTTCTACAACTGAAGCAGAGTATATTGCAGTAGTAGAAACATGTAAAGAGATGTTGTGGATGAAGCGCTTTGTACAAAAGCTTGGCTTCAAGCAACAACGATATGTGATATATTGTGACAATATATTGATAAGAATGCTTTCCTTTGTACAAAAGCTTGGTAAGAATGCTTCATTTCATTCCAGAACAAAGCATATTGATGTGAGATATCAATGGCTTAAAGATGCTTTAAATGATGAATTGTTTGAGCTTGAGAAGATACACACTAATCATAATGAATTTGATATGTTGACAAAGAATCTACCAAGATCGAAGCTTGAGTTTTGTCGTTCCACAGTGGGAATGACAAATTCATCCTCAAAATGA

Protein sequence

SIVDADVVNLATQQSSWVIDSGASVHATSKREFFASYTSGDFGSVRMGNDKSANTIGIIDVHLKNENGSRLILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKLSSLYYMDAKIIDFDINTMNDEANVKLWHKRLSHISEKGLKILTKKNHLPDPKSTPLKRCPHCLAGKQTRVTFKSSQHSRKPNVLELVYSDVCGPMKTKSLGVYTLKTKDQVLQAFKQFHAFVEKETCENLKCVRTDNGGKTLNTVVHVLNFTPCVPLGSKVPNRIWSGKDISYSHLCVFGCKAFVHVPKDDISKFDAKTKACVFLGYGQDEFGYKLYDPVKKKLIRSRDVVFVEDQTIADIEKIAKHSDNLIDLSSTSLTQSSTQIEDEVQNRQLFLHKLVVKGFNQKKGIDFDEIFAPVVKMSSIRVVLGLAASLVLEVEQMDKGKEHLVCKLKKSLYGLKQAPRKWYKKFESIMGEQGYRKTTSDHYVFFHKFFDDDFKVLERFKMSQAKSVSSPLPSHFKLISKQSPSTYKEKEDMNKYVMVCTRPDISHVIGVVSRYMYNPGKQHWEAVKCIMRYLRGTSSLKLTFGNGKPILAGGAVFWQSRLQKCVALSTTEAEYIAVVETCKEMLWMKRFVQKLGFKQQRYVIYCDNILIRMLSFVQKLGKNASFHSRTKHIDVRYQWLKDALNDELFELEKIHTNHNEFDMLTKNLPRSKLEFCRSTVGMTNSSSK*

Homology

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BLAST of Cucsa.235640 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.4e-69
Identity = 154/335 (45.97%), Postives = 200/335 (59.70%), Query Frame = 1


Query: 437  LVLEVEQM-----DKGKEHLVCKLKKSLYGLKQAPRKWYKKFESIMGEQGYRKTTSDH-Y 496
            L+L V+ M     DKG   L+ KLK  L   K    K     + I+G +  R+ TS   +
Sbjct: 1005 LLLYVDDMLIVGKDKG---LIAKLKGDLS--KSFDMKDLGPAQQILGMKIVRERTSRKLW 1064

Query: 497  VFFHKFFDDDFKVLERFKMSQAKSVSSPLPSHFKLISKQSPSTYKEKEDMNK-------- 556
            +   K+ +   +VLERF M  AK VS+PL  H KL  K  P+T +EK +M K        
Sbjct: 1065 LSQEKYIE---RVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVG 1124

Query: 557  ---YVMVCTRPDISHVIGVVSRYMYNPGKQHWEAVKCIMRYLRGTSSLKLTFGNGKPIL- 616
               Y MVCTRPDI+H +GVVSR++ NPGK+HWEAVK I+RYLRGT+   L FG   PIL 
Sbjct: 1125 SLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILK 1184

Query: 617  ------------------------AGGAVFWQSRLQKCVALSTTEAEYIAVVETCKEMLW 676
                                    +GGA+ WQS+LQKCVALSTTEAEYIA  ET KEM+W
Sbjct: 1185 GYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIW 1244

Query: 677  MKRFVQKLGFKQQRYVIYCDNILIRMLSFVQKLGKNASFHSRTKHIDVRYQWLKDALNDE 730
            +KRF+Q+LG  Q+ YV+YCD+           L KN+ +H+RTKHIDVRY W+++ ++DE
Sbjct: 1245 LKRFLQELGLHQKEYVVYCDS------QSAIDLSKNSMYHARTKHIDVRYHWIREMVDDE 1304

HSP 2 Score: 250.8 bits (639), Expect = 4.8e-65
Identity = 130/275 (47.27%), Postives = 181/275 (65.82%), Query Frame = 1


Query: 4   DADVVNLATQQSSWVIDSGASVHATSKREFFASYTSGDFGSVRMGNDKSANTIGIIDVHL 63
           + + ++L+  +S WV+D+ AS HAT  R+ F  Y +GDFG+V+MGN   +   GI D+ +
Sbjct: 281 EEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICI 340

Query: 64  KNENGSRLILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKLSS 123
           K   G  L+LK+V+H+P +RMNLIS   LD  G+ + F N  W+LTKGS+ IAKG    +
Sbjct: 341 KTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGT 400

Query: 124 LYYMDAKIIDFDINTMNDEANVKLWHKRLSHISEKGLKILTKKNHLPDPKSTPLKRCPHC 183
           LY  +A+I   ++N   DE +V LWHKR+ H+SEKGL+IL KK+ +   K T +K C +C
Sbjct: 401 LYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYC 460

Query: 184 LAGKQTRVTFKSSQHSRKPNVLELVYSDVCGPMKTKSLG-----------------VYTL 243
           L GKQ RV+F++S   RK N+L+LVYSDVCGPM+ +S+G                 VY L
Sbjct: 461 LFGKQHRVSFQTSS-ERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYIL 520

Query: 244 KTKDQVLQAFKQFHAFVEKETCENLKCVRTDNGGK 262
           KTKDQV Q F++FHA VE+ET   LK +R+DNGG+
Sbjct: 521 KTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGE 554

HSP 3 Score: 138.3 bits (347), Expect = 3.4e-31
Identity = 68/159 (42.77%), Postives = 106/159 (66.67%), Query Frame = 1


Query: 260 GKTLNTVVHVLNFTPCVPLGSKVPNRIWSGKDISYSHLCVFGCKAFVHVPKDDISKFDAK 319
           G+ + T  +++N +P VPL  ++P R+W+ K++SYSHL VFGC+AF HVPK+  +K D K
Sbjct: 611 GEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDK 670

Query: 320 TKACVFLGYGQDEFGYKLYDPVKKKLIRSRDVVFVEDQ--TIADIEKIAKHS--DNLIDL 379
           +  C+F+GYG +EFGY+L+DPVKKK+IRSRDVVF E +  T AD+ +  K+    N + +
Sbjct: 671 SIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTI 730

Query: 380 SSTSLTQSSTQ-IEDEVQNRQLFLHKLVVKGFNQKKGID 414
            STS   +S +   DEV  +     +++ +G    +G++
Sbjct: 731 PSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVE 769

HSP 4 Score: 135.6 bits (340), Expect = 2.2e-30
Identity = 72/129 (55.81%), Postives = 87/129 (67.44%), Query Frame = 1


Query: 400  KLVVKGFNQKKGIDFDEIFAPVVKMSSIRVVLGLAASLVLEVEQMD-------------- 459
            +LVVKGF QKKGIDFDEIF+PVVKM+SIR +L LAASL LEVEQ+D              
Sbjct: 877  RLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEI 936

Query: 460  ----------KGKEHLVCKLKKSLYGLKQAPRKWYKKFESIMGEQGYRKTTSDHYVFFHK 505
                       GK+H+VCKL KSLYGLKQAPR+WY KF+S M  Q Y KT SD  V+F +
Sbjct: 937  YMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKR 996

[Close]

BLAST of Cucsa.235640 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 118.2 bits (295), Expect = 3.7e-25
Identity = 75/262 (28.63%), Postives = 127/262 (48.47%), Query Frame = 1


Query: 502  KVLERFKMSQAKSVSSPLPS--HFKLISKQSPSTYKEKEDMN--KYVMVCTRPDISHVIG 561
            K+L +F M    +VS+PLPS  +++L++         +  +    Y+M+CTRPD++  + 
Sbjct: 1145 KILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVN 1204

Query: 562  VVSRYMYNPGKQHWEAVKCIMRYLRGTSSLKLTF-----------GNGKPILAGGAV--- 621
            ++SRY      + W+ +K ++RYL+GT  +KL F           G      AG  +   
Sbjct: 1205 ILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRK 1264

Query: 622  ---------------FWQSRLQKCVALSTTEAEYIAVVETCKEMLWMKRFVQKLGFKQQR 681
                            W ++ Q  VA S+TEAEY+A+ E  +E LW+K  +  +  K + 
Sbjct: 1265 STTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLEN 1324

Query: 682  YV-IYCDNILIRMLSFVQKLGKNASFHSRTKHIDVRYQWLKDALNDELFELEKIHTNHNE 730
             + IY DN           +  N S H R KHID++Y + ++ + + +  LE I T +  
Sbjct: 1325 PIKIYEDN------QGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQL 1384

HSP 2 Score: 73.2 bits (178), Expect = 1.4e-11
Identity = 44/126 (34.92%), Postives = 66/126 (52.38%), Query Frame = 1


Query: 389  DEVQNRQLFLHKLVVKGFNQKKGIDFDEIFAPVVKMSSIRVVLGLAASLVLEVEQMDKG- 448
            +E+ N   +  +LV +GF QK  ID++E FAPV ++SS R +L L     L+V QMD   
Sbjct: 946  NELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKT 1005

Query: 449  -------KEHL--------------VCKLKKSLYGLKQAPRKWYKKFESIMGEQGYRKTT 493
                   KE +              VCKL K++YGLKQA R W++ FE  + E  +  ++
Sbjct: 1006 AFLNGTLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSS 1065

HSP 3 Score: 61.2 bits (147), Expect = 5.4e-08
Identity = 37/102 (36.27%), Postives = 55/102 (53.92%), Query Frame = 1


Query: 260 GKTLNTVVHVLNFTPCVPL--GSKVPNRIWSGKDISYSHLCVFGCKAFVHVPKDDISKFD 319
           G+ + T  +++N  P   L   SK P  +W  K     HL VFG   +VH+ K+   KFD
Sbjct: 611 GEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHI-KNKQGKFD 670

Query: 320 AKTKACVFLGYGQDEFGYKLYDPVKKKLIRSRDVVFVEDQTI 360
            K+   +F+GY  +  G+KL+D V +K I +RDVV  E   +
Sbjct: 671 DKSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDETNMV 709

[Close]

BLAST of Cucsa.235640 vs. Swiss-Prot
Match: M300_ARATH (Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana GN=AtMg00300 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.2e-14
Identity = 45/114 (39.47%), Postives = 66/114 (57.89%), Query Frame = 1


Query: 104 GIWKLTKGSMDIAKGQKLSSLYYMDAKIIDFDIN---TMNDEANVKLWHKRLSHISEKGL 163
           G+ K+ KG   I KG +  SLY +   +   + N   T  DE   +LWH RL+H+S++G+
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDET--RLWHSRLAHMSQRGM 86

Query: 164 KILTKKNHLPDPKSTPLKRCPHCLAGKQTRVTFKSSQHSRKPNVLELVYSDVCG 215
           ++L KK  L   K + LK C  C+ GK  RV F + QH+ K N L+ V+SD+ G
Sbjct: 87  ELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTK-NPLDYVHSDLWG 137

[Close]

BLAST of Cucsa.235640 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-07
Identity = 42/164 (25.61%), Postives = 71/164 (43.29%), Query Frame = 1


Query: 502 KVLERFKMSQAKSVSSPLPSHFKLISKQSPSTYKEKEDMNKYV-----MVCTRPDISHVI 561
           ++L    M   K +S+PLP   KL S  S + Y +  D    V     +  TRPDIS+ +
Sbjct: 64  QILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 123

Query: 562 GVVSRYMYNPGKQHWEAVKCIMRYLRGT--------------------------SSLKLT 621
            +V + M+ P    ++ +K ++RY++GT                          +S + +
Sbjct: 124 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 183

Query: 622 FGNGKPILAGGAVFWQSRLQKCVALSTTEAEYIAVVETCKEMLW 635
                  L    + W ++ Q  V+ S+TE EY A+  T  E+ W
Sbjct: 184 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cucsa.235640 vs. TrEMBL
Match: A5C9D7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007304 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 5.9e-139
Identity = 264/472 (55.93%), Postives = 310/472 (65.68%), Query Frame = 1


Query: 2   IVDADVVNLATQQSSWVIDSGASVHATSKREFFASYTSGDFGSVRMGNDKSANTIGIIDV 61
           + D+DVVN A Q+S WVID GAS+HAT +++FF SYTSGDFGSVRMGND SA  IG+ DV
Sbjct: 256 VYDSDVVNFACQESXWVIDXGASIHATPQKDFFTSYTSGDFGSVRMGNDGSAKAIGMGDV 315

Query: 62  HLKNENGSRLILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKL 121
            L+  NG+ L LKNVKHIP IRMNLISTGKLDD+GFCNTF +  WKLT+GSM IAKG K 
Sbjct: 316 RLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQWKLTRGSMVIAKGNKS 375

Query: 122 SSLYYMDAKIIDFDINTMNDEANVKLWHKRLSHISEKGLKILTKKNHLPDPKSTPLKRCP 181
           SSLY M A++ID  IN ++D++  +LWH +L H+SEKGL IL KKN L   K   LKRC 
Sbjct: 376 SSLYLMQARVIDSSINAVDDDSTFELWHNKLGHMSEKGLMILAKKNLLXGMKKGSLKRCA 435

Query: 182 HCLAGKQTRVTFKSSQHSRKPNVLELVYSDVCGPMKTKSLG-----------------VY 241
           HCLAGKQTRV FK+  H+RKP +L+LVYSDV GPMKTK+LG                 VY
Sbjct: 436 HCLAGKQTRVAFKTLHHTRKPGMLDLVYSDVYGPMKTKTLGGSLYFVTFIDDHSRKIWVY 495

Query: 242 TLKTKDQVLQAFKQFHAFVEKETCENLKCVRTDNG------------------------- 301
           TLKTKDQVL  FKQFHA VE+++ E LKC+RTDNG                         
Sbjct: 496 TLKTKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHGFRHQKTPPKT 555

Query: 302 --------------------------------GKTLNTVVHVLNFTPCVPLGSKVPNRIW 361
                                           G+ LNT+VHVLN TPCVPL   VP+RIW
Sbjct: 556 PQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTIVHVLNLTPCVPLEFDVPDRIW 615

Query: 362 SGKDISYSHLCVFGCKAFVHVPKDDISKFDAKTKACVFLGYGQDEFGYKLYDPVKKKLIR 396
           S  +ISY HL VFGCKAFVH+PKD+ SK DAKT+ CVF+GYGQDE GYK YD V+KKL R
Sbjct: 616 SNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQDELGYKFYDLVQKKLXR 675

[Close]

BLAST of Cucsa.235640 vs. TrEMBL
Match: A5C9D7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007304 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 3.3e-81
Identity = 161/270 (59.63%), Postives = 189/270 (70.00%), Query Frame = 1


Query: 502  KVLERFKMSQAKSVSSPLPSHFKLISKQSPSTYKEKEDMNK-----------YVMVCTRP 561
            KV  RF MS+ K VSSPL SHFKL S+ SPST KEKEDM +           Y MVCTRP
Sbjct: 1039 KVFARFNMSKFKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAIGSLMYAMVCTRP 1098

Query: 562  DISHVIGVVSRYMYNPGKQHWEAVKCIMRYLRGTSSLKLTFGNGKPIL------------ 621
            DI++ +GVVSR++ NPG+ HWEAVK IMRYLRGTS LKLTFG+GKPIL            
Sbjct: 1099 DIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDV 1158

Query: 622  -------------AGGAVFWQSRLQKCVALSTTEAEYIAVVETCKEMLWMKRFVQKLGFK 681
                         +GGAV WQSRLQKCVALSTTEAEYIA VE CKE+LWMK F+Q+LGFK
Sbjct: 1159 DNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYIAAVEACKELLWMKCFMQELGFK 1218

Query: 682  QQRYVIYCDNILIRMLSFVQKLGKNASFHSRTKHIDVRYQWLKDALNDELFELEKIHTNH 736
            QQRYV+YCDN           L KN+++H+R+KHIDVRY W++DALND LFE+EKIHT++
Sbjct: 1219 QQRYVVYCDN------QSAIHLSKNSTYHARSKHIDVRYHWMRDALNDNLFEIEKIHTDN 1278

HSP 2 Score: 109.4 bits (272), Expect = 1.9e-20
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 388 EDEVQNRQLFLHKLVVKGFNQKKGIDFDEIFAPVVKMSSIRVVLGLAASLVLEVEQMDKG 447
           ++E  ++  +  +LVVK    K+  D  EI    VK + +   L     +      + KG
Sbjct: 861 QEEHTSQPRYKARLVVKRVQSKESFDL-EIQQMDVKTAFLHGDLDKEIYMEQPEGFVLKG 920

Query: 448 KEHLVCKLKKSLYGLKQAPRKWYKKFESIMGEQGYRKTTSDHYVFFHKFFDDDFKVL 505
           KE  VCKLKKSLYGLKQAPR+WYKKFES+MGEQGYRKTTSDH VF  KF DDDF +L
Sbjct: 921 KEDYVCKLKKSLYGLKQAPRQWYKKFESVMGEQGYRKTTSDHCVFVQKFSDDDFVIL 976

HSP 3 Score: 470.7 bits (1210), Expect = 3.3e-129
Identity = 250/472 (52.97%), Postives = 302/472 (63.98%), Query Frame = 1


Query: 2   IVDADVVNLATQQSSWVIDSGASVHATSKREFFASYTSGDFGSVRMGNDKSANTIGIIDV 61
           + D+DVVN A Q++SWVIDSGAS+HAT +++FF SYT  DFGSVRMGND  A  IG+ DV
Sbjct: 30  VYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTFSDFGSVRMGNDGLAKAIGMGDV 89

Query: 62  HLKNENGSRLILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKL 121
            L+  NG+ L LKNVKHIP IRMNLIST KLDD+G CNTF +  WKLT+GSM I K  K 
Sbjct: 90  RLETSNGTMLTLKNVKHIPDIRMNLISTRKLDDEGLCNTFRDSQWKLTRGSMVITKENKS 149

Query: 122 SSLYYMDAKIIDFDINTMNDEANVKLWHKRLSHISEKGLKILTKKNHLPDPKSTPLKRCP 181
           SSLY M  ++ID  IN ++D++  KLWH RLSH+SEKGL I+ KKN L   K   LKRC 
Sbjct: 150 SSLYLMQVRVIDSSINAVDDDSTFKLWHNRLSHMSEKGLMIMAKKNLLSGMKKGSLKRCA 209

Query: 182 HCLAGKQTRVTFKSSQHSRKPNVLELVYSDVCGPMKTKSLG-----------------VY 241
           HCL GKQTRV FK+  H+RKP +L+LVYSDVCGPMKTK+LG                 VY
Sbjct: 210 HCLGGKQTRVAFKTLHHTRKPGMLDLVYSDVCGPMKTKTLGGSLYFVTFIDDHSRKIWVY 269

Query: 242 TLKTKDQVLQAFKQFHAFVEKETCENLKCVRTDNGGK----------------------- 301
           TLKTKDQVL  FKQFHA VE+++ E LKC++ DNGG+                       
Sbjct: 270 TLKTKDQVLDVFKQFHALVERQSGEKLKCIQIDNGGEYSSPFDEYCRQHGIRHQKTPPKT 329

Query: 302 -TLNTVVHVLNFT-----PCV----------------------------PLGSKVPNRIW 361
             LN +   +N T      C+                            PL   VP+RIW
Sbjct: 330 PQLNGLAESMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHLLNLTPCVPLEFDVPDRIW 389

Query: 362 SGKDISYSHLCVFGCKAFVHVPKDDISKFDAKTKACVFLGYGQDEFGYKLYDPVKKKLIR 396
           S  +I Y HL VFGCKAFVH+PKD+ISK DAKT+ CVF+GYG DE GY+ YDP++KKL+R
Sbjct: 390 SNNEICYDHLRVFGCKAFVHIPKDEISKLDAKTRPCVFIGYGHDELGYRFYDPMQKKLVR 449

[Close]

BLAST of Cucsa.235640 vs. TrEMBL
Match: A5B9T5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030853 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 8.7e-74
Identity = 181/391 (46.29%), Postives = 220/391 (56.27%), Query Frame = 1


Query: 388 EDEVQNRQLFLHKLVVKGFNQKKGIDFDEIFAPVVKMSSIRVVLGLAASLVLEVEQMDKG 447
           ++E  ++  +  +LVVKGFNQKK  +               + +      VL      KG
Sbjct: 615 QEEHTSQPRYKARLVVKGFNQKKDKE---------------IYMEQQEGFVL------KG 674

Query: 448 KEHLVCKLKKSLYGLKQAPR----------KWYKKF--------ESIMGEQGYRKTTSDH 507
           KE  V KLKKSLYGLKQAPR          +  K F        + I+G +  R   S  
Sbjct: 675 KEDYVSKLKKSLYGLKQAPRNVSRIDNLKKQLSKSFAMKDLGPVKRILGIRIERDRASKK 734

Query: 508 YVFFHKFFDDDFKVLERFKMSQAKSVSSPLPSHFKLISKQSPSTYKEKEDMNKYVMVCTR 567
                + + +  KVL RF MS+AK VSSPL SHFKL S+ SPST KEKEDM +       
Sbjct: 735 LCMLQEQYIE--KVLARFNMSKAKVVSSPLTSHFKLSSRHSPSTDKEKEDMRRVSYALAG 794

Query: 568 PDISHVIGVVSRYMYNPGKQHWEAVKCIMRYLRGTSSLKLTFGNGKPIL----------- 627
             + +V+               EAVK IMRYLRGTS LKLTFG GKPIL           
Sbjct: 795 GSLMYVM---------------EAVKWIMRYLRGTSKLKLTFGGGKPILVGYTDSDMAGD 854

Query: 628 --------------AGGAVFWQSRLQKCVALSTTEAEYIAVVETCKEMLWMKRFVQKLGF 687
                         +GGAV WQSRLQKCVALSTTEAEYIA  E CKE+LWMK F+Q+LGF
Sbjct: 855 VDNRRSTSGYLMTCSGGAVSWQSRLQKCVALSTTEAEYIAAAEACKELLWMKCFMQELGF 914

Query: 688 KQQRYVIYCDNILIRMLSFVQKLGKNASFHSRTKHIDVRYQWLKDALNDELFELEKIHTN 736
           KQQRYV+YCDN           L KN+++H+R+KHI VRY W++DALND L E+EKIHTN
Sbjct: 915 KQQRYVVYCDN------QSPIHLSKNSTYHARSKHIHVRYHWMRDALNDNLLEIEKIHTN 961

HSP 2 Score: 451.4 bits (1160), Expect = 2.0e-123
Identity = 235/415 (56.63%), Postives = 283/415 (68.19%), Query Frame = 1


Query: 2   IVDADVVNLATQQSSWVIDSGASVHATSKREFFASYTSGDFGSVRMGNDKSANTIGIIDV 61
           + D+DVVN A  ++SWVIDSGAS+HAT +++FF SYTS             A  IG+ DV
Sbjct: 241 VYDSDVVNFACXETSWVIDSGASIHATLRKDFFTSYTS-------------AKAIGMGDV 300

Query: 62  HLKNENGSRLILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKL 121
            L+  NG+ L LKNVKHIP IRMNLIST KLDD+GFCNTF +  W LT+GSM IAKG K 
Sbjct: 301 RLETSNGTMLTLKNVKHIPDIRMNLISTRKLDDEGFCNTFRDSQWNLTRGSMVIAKGNKS 360

Query: 122 SSLYYMDAKIIDFDINTMNDEANVKLWHKRLSHISEKGLKILTKKNHLPDPKSTPLKRCP 181
           SSLY M A++ID +IN ++D++  +LWH RL H+SEKGL IL KKN L   K   LKRC 
Sbjct: 361 SSLYLMQARVIDSNINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSGMKKGSLKRCA 420

Query: 182 HCLAGKQTRVTFKSSQHSRKPNVLELVYSDVCGPMKTKSLG-----------------VY 241
           HCLAGKQTRV FK+  H+RKP +L+LVYSDVCGPMKTK+L                  VY
Sbjct: 421 HCLAGKQTRVAFKTLHHTRKPGMLDLVYSDVCGPMKTKTLSESLYFVTFIDDHSRKIWVY 480

Query: 242 TLKTKDQVLQAFKQFHAFVEKETCENLKCVRTDNGGKTLNTVVHVLNFTPCVPLGSKVPN 301
           TLKTKDQVL  FKQFHA VE+++ E LKC+R DNGG+             C      VP+
Sbjct: 481 TLKTKDQVLDVFKQFHALVERQSGEKLKCIRIDNGGEYSGPFDEY-----CRQXEFDVPD 540

Query: 302 RIWSGKDISYSHLCVFGCKAFVHVPKDDISKFDAKTKACVFLGYGQDEFGYKLYDPVKKK 361
           RIWS  +ISY HL VFGCKAFVH+PK + SK DAKT+ CVF+GY QDE GY+ YDPV+KK
Sbjct: 541 RIWSNNEISYDHLRVFGCKAFVHIPKYERSKLDAKTRPCVFIGYDQDELGYRFYDPVQKK 600

Query: 362 LIRSRDVVFVEDQTIADIEKI----AKHSDNLIDLSSTSLTQSSTQIEDEVQNRQ 396
           L+RSRDVV +ED TI DI K     ++HS +LIDL    LT   TQ+EDE  + Q
Sbjct: 601 LVRSRDVVXMEDHTIQDIXKTNPMESQHSXDLIDLDPAPLTNLPTQVEDEAHDDQ 637

[Close]

BLAST of Cucsa.235640 vs. TrEMBL
Match: A5BAF2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027081 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.0e-79
Identity = 158/270 (58.52%), Postives = 186/270 (68.89%), Query Frame = 1


Query: 502  KVLERFKMSQAKSVSSPLPSHFKLISKQSPSTYKEKEDMNK-----------YVMVCTRP 561
            K+L RF MS+AK VSSPL SHFKL S+ +PST KEKEDM +           YVMVCTRP
Sbjct: 885  KMLARFNMSKAKVVSSPLASHFKLSSRHNPSTDKEKEDMRRVSYASAVGSLMYVMVCTRP 944

Query: 562  DISHVIGVVSRYMYNPGKQHWEAVKCIMRYLRGTSSLKLTFGNGKPIL------------ 621
            DI++ IGVV R++ NPG+ HWEAVK IMRYLRGTS LKLTFG GKPIL            
Sbjct: 945  DIAYAIGVVIRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGGGKPILVGYTDSDMAGDV 1004

Query: 622  -------------AGGAVFWQSRLQKCVALSTTEAEYIAVVETCKEMLWMKRFVQKLGFK 681
                         +GG V WQSR QKCVALSTTEAEYIA  E C E+LWMK F+Q+LGFK
Sbjct: 1005 DNRRSTLGYLMTFSGGTVSWQSRQQKCVALSTTEAEYIAAXEACNELLWMKCFMQELGFK 1064

Query: 682  QQRYVIYCDNILIRMLSFVQKLGKNASFHSRTKHIDVRYQWLKDALNDELFELEKIHTNH 736
            QQRYV+YCDN           L KN+++H+R+KHIDVRY W++DALND LFE+EKIHT++
Sbjct: 1065 QQRYVVYCDN------QSAIHLSKNSTYHARSKHIDVRYHWMRDALNDNLFEIEKIHTDN 1124

HSP 2 Score: 84.7 bits (208), Expect = 5.0e-13
Identity = 44/73 (60.27%), Postives = 55/73 (75.34%), Query Frame = 1


Query: 388 EDEVQNRQLFLHKLVVKGFNQKKGIDFDEIFAPVVKMSSIRVVLGLAASLVLEVEQMDKG 447
           ++E  ++  +  +L+VKGFNQKKG DFDEIF+PVVKMSSIRVVLGLAASL LE++QMD  
Sbjct: 733 QEEHTSQPXYKARLIVKGFNQKKGXDFDEIFSPVVKMSSIRVVLGLAASLDLEIQQMDVK 792

Query: 448 KEHLVCKLKKSLY 461
              L   L K +Y
Sbjct: 793 TAFLHGDLXKEIY 805

HSP 3 Score: 449.1 bits (1154), Expect = 1.0e-122
Identity = 240/442 (54.30%), Postives = 285/442 (64.48%), Query Frame = 1


Query: 32  EFFASYTSGDFGSVRMGNDKSANTIGIIDVHLKNENGSRLILKNVKHIPYIRMNLISTGK 91
           +FF SYTSGDFGSVRMGND SA  IG+ +V L+  NG+ L LKNVKHIP IRMNLISTGK
Sbjct: 189 DFFTSYTSGDFGSVRMGNDDSAKAIGMRNVRLETSNGTMLTLKNVKHIPDIRMNLISTGK 248

Query: 92  LDDKGFCNTFDNGIWKLTKGSMDIAKGQKLSSLYYMDAKIIDFDINTMNDEANVKLWHKR 151
           LDD+GF N F +  WKLT+GSM IAKG K SSLY M  ++ID  IN ++D++  +LWH R
Sbjct: 249 LDDEGFYNIFRDSQWKLTRGSMVIAKGNKSSSLYLMQTRVIDSSINAVDDDSTFELWHNR 308

Query: 152 LSHISEKGLKILTKKNHLPDPKSTPLKRCPHCLAGKQTRVTFKSSQHSRKPNVLELVYSD 211
           L H+SEKGL IL KKN L   K   LKRC HCLAGKQTRV FK+ +++RKP +L+LVYSD
Sbjct: 309 LGHMSEKGLMILAKKNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRYTRKPGMLDLVYSD 368

Query: 212 VCGPMKTKSLG-----------------VYTLKTKDQVLQAFKQFHAFVEKETCENLKCV 271
           VCGPMKTK+LG                 VYTLKTKDQVL  FKQFHA VE+++ E LKC+
Sbjct: 369 VCGPMKTKTLGGSLYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCI 428

Query: 272 RTDNGGK------------------------TLNTVVHVLNF------------------ 331
           RTDNGG+                         LN +   +N                   
Sbjct: 429 RTDNGGEYSSPFDEYCRQHGIRHQKTSPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRS 488

Query: 332 ---------------TPCVPLGSKVPNRIWSGKDISYSHLCVFGCKAFVHVPKDDISKFD 391
                          TPCVPL   VP+RIWS  +ISY HL VFGCKAFVH+PKD+ SK D
Sbjct: 489 FWGEALNTVVHVLNLTPCVPLEFDVPDRIWSKNEISYDHLRVFGCKAFVHIPKDERSKLD 548

Query: 392 AKTKACVFLGYGQDEFGYKLYDPVKKKLIRSRDVVFVEDQTIADIEKI----AKHSDNLI 396
           AKT+ CVF+GYGQDE GY+ YDPV+KKL+RSRDVVF+ED TI DIEK     ++HS +LI
Sbjct: 549 AKTRPCVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHSGDLI 608

[Close]

BLAST of Cucsa.235640 vs. TrEMBL
Match: A5C540_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024474 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 9.3e-84
Identity = 200/428 (46.73%), Postives = 237/428 (55.37%), Query Frame = 1


Query: 388  EDEVQNRQLFLHKLVVKGFNQKKGIDFDEIFAPVVKMSSIRVVLGLAASLVLEVEQMD-- 447
            ++E  ++  +  +LVVKGFNQKKGIDFDEIF PVVKMSSIRVVLGLAASL LE++QMD  
Sbjct: 764  QEEHTSQPRYKARLVVKGFNQKKGIDFDEIFFPVVKMSSIRVVLGLAASLDLEIQQMDVK 823

Query: 448  ----------------------KGKEHLVCKLKKSLYGLKQAPRKWY------------K 507
                                  KGKE  VCKLKKSLYGLKQAPR+W             K
Sbjct: 824  TAFLHGNLDKEIYMEQPEGFVLKGKEDYVCKLKKSLYGLKQAPRQWNVSRIDNLKKQLSK 883

Query: 508  KF--------ESIMGEQGYRKTTSDHYVFFHKFFDDDFKVLERFKMSQAKSVSSPLPSHF 567
             F        + I+G +  R   S       + + ++  VL RF MS+AK VSSPL SHF
Sbjct: 884  SFAMKDLGPVKRILGIRIERDRASKKLCMLQEQYIEN--VLARFNMSKAKVVSSPLASHF 943

Query: 568  KLISKQSPSTYKEKEDMNK-----------YVMVCTRPDISHVIGVVSRYMYNPGKQHWE 627
            KL S+ SPST KEKEDM +           Y MVCTRPDI++ IGVVSR++ NPG+ HWE
Sbjct: 944  KLSSRHSPSTDKEKEDMRRVPYASAVGSLMYAMVCTRPDIAYAIGVVSRFLSNPGRHHWE 1003

Query: 628  AVKCIMRYLRGTSSLKLTFGNGKPIL-------------------------AGGAVFWQS 687
            AVK IMRYLRGTS LKLTFG+GKPIL                         +GGAV WQS
Sbjct: 1004 AVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRRXTSGYLMTFSGGAVSWQS 1063

Query: 688  RLQKCVALSTTEAEYIAVVETCKEMLWMKRFVQKLGFKQQRYVIYCDNILIRMLSFVQKL 736
            RLQKCVALSTTEA+YIA  E CKE+LW K F+Q+LGFKQQRY +YCDN            
Sbjct: 1064 RLQKCVALSTTEAKYIATAEACKELLWXKCFMQELGFKQQRYXVYCDN------------ 1123

HSP 2 Score: 443.4 bits (1139), Expect = 5.6e-121
Identity = 240/468 (51.28%), Postives = 287/468 (61.32%), Query Frame = 1


Query: 2   IVDADVVNLATQQSSWVIDSGASVHATSKREFFASYTSGDFGSVRMGNDKSANTIGIIDV 61
           + D+DVVN A Q++SWVIDSGAS+HAT +++FF SYTSGDFGSVRMGND SA  IG+ DV
Sbjct: 143 VYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVRMGNDGSAKAIGMGDV 202

Query: 62  HLKNENGSRLILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKL 121
            L+  NG+ L LKNVKHIP IRMNLISTGKLDD+GF NTF +  WKLT+GSM IAKG K 
Sbjct: 203 RLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFXNTFRDSQWKLTRGSMXIAKGNKS 262

Query: 122 SSLYYMDAKIIDFDINTMNDEANVKLWHKRLSHISEKGLKILTKKNHLPDPKSTPLKRCP 181
           SSLY M A++ID  IN ++D++  +LWH RL H+SEKGL IL KKN L   K   LKRC 
Sbjct: 263 SSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSXMKKGSLKRCA 322

Query: 182 HCLAGKQTRVTFKSSQHSRKPNVLELVYSDVCGPMKTKSLG-----------------VY 241
           HCLAGK TRV FK+  H+RKP +L+LVY DVCGPMKTK+L                  VY
Sbjct: 323 HCLAGKXTRVAFKTLHHTRKPGMLDLVYFDVCGPMKTKTLXGSLYFVTFIDDHSRKIWVY 382

Query: 242 TLKTKDQVLQAFKQFHAFVEKETCENLKCVRTDNGG------------------------ 301
           TLK KDQVL  FKQFHA VE+++ E LKC+RTDNGG                        
Sbjct: 383 TLKXKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHGIRHQKTPPKT 442

Query: 302 -----------KTLNTVVHVL----------------------NFTPCVPLGSKVPNRIW 361
                      +TL   V  L                      N TPCVPL   VP+RIW
Sbjct: 443 PQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIW 502

Query: 362 SGKDISYSHLCVFGCKAFVHVPKDDISKFDAKTKACVFLGYGQDEFGYKLYDPVKKKLIR 396
           S  +ISY HL VFGCKAFVH+PKD+ SK DAKT+ CVF+GYGQDE GY+ YD V+KKL+ 
Sbjct: 503 SNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQDELGYRFYDSVQKKLV- 562

[Close]

BLAST of Cucsa.235640 vs. TAIR10
Match: ATMG00300.1 (ATMG00300.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 82.4 bits (202), Expect = 1.3e-15
Identity = 45/114 (39.47%), Postives = 66/114 (57.89%), Query Frame = 1


Query: 104 GIWKLTKGSMDIAKGQKLSSLYYMDAKIIDFDIN---TMNDEANVKLWHKRLSHISEKGL 163
           G+ K+ KG   I KG +  SLY +   +   + N   T  DE   +LWH RL+H+S++G+
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDET--RLWHSRLAHMSQRGM 86

Query: 164 KILTKKNHLPDPKSTPLKRCPHCLAGKQTRVTFKSSQHSRKPNVLELVYSDVCG 215
           ++L KK  L   K + LK C  C+ GK  RV F + QH+ K N L+ V+SD+ G
Sbjct: 87  ELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTK-NPLDYVHSDLWG 137

[Close]

BLAST of Cucsa.235640 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 72.8 bits (177), Expect = 1.0e-12
Identity = 41/121 (33.88%), Postives = 63/121 (52.07%), Query Frame = 1


Query: 400 KLVVKGFNQKKGIDFDEIFAPVVKMSSIRVVLGLAASLVLEVEQMDKGKEHL-------- 459
           +LV KG+ Q++GIDF E F+PV K++S++++L ++A     + Q+D     L        
Sbjct: 149 RLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEI 208

Query: 460 --------------------VCKLKKSLYGLKQAPRKWYKKFESIMGEQGYRKTTSDHYV 493
                               VC LKKS+YGLKQA R+W+ KF   +   G+ ++ SDH  
Sbjct: 209 YMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTY 268

HSP 2 Score: 63.2 bits (152), Expect = 7.9e-10
Identity = 45/161 (27.95%), Postives = 75/161 (46.58%), Query Frame = 1


Query: 548 TRPDISHVIGVVSRYMYNPGKQHWEAVKCIMRYLRGTSSLKLTFG--------------- 607
           TR DIS  +  +S++   P   H +AV  I+ Y++GT    L +                
Sbjct: 391 TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASF 450

Query: 608 ----------NGKPILAGGAVF-WQSRLQKCVALSTTEAEYIAVVETCKEMLWMKRFVQK 667
                     NG  +  G ++  W+S+ Q+ V+ S+ EAEY A+     EM+W+ +F ++
Sbjct: 451 QSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRE 510

Query: 668 LGFKQQR-YVIYCDNILIRMLSFVQKLGKNASFHSRTKHID 682
           L     +  +++CDN      +    +  NA FH RTKHI+
Sbjct: 511 LQLPLSKPTLLFCDN------TAAIHIATNAVFHERTKHIE 545

[Close]

BLAST of Cucsa.235640 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-08
Identity = 42/164 (25.61%), Postives = 71/164 (43.29%), Query Frame = 1


Query: 502 KVLERFKMSQAKSVSSPLPSHFKLISKQSPSTYKEKEDMNKYV-----MVCTRPDISHVI 561
           ++L    M   K +S+PLP   KL S  S + Y +  D    V     +  TRPDIS+ +
Sbjct: 64  QILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 123

Query: 562 GVVSRYMYNPGKQHWEAVKCIMRYLRGT--------------------------SSLKLT 621
            +V + M+ P    ++ +K ++RY++GT                          +S + +
Sbjct: 124 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 183

Query: 622 FGNGKPILAGGAVFWQSRLQKCVALSTTEAEYIAVVETCKEMLW 635
                  L    + W ++ Q  V+ S+TE EY A+  T  E+ W
Sbjct: 184 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cucsa.235640 vs. NCBI nr
Match: gi|147784778|emb|CAN75440.1| (hypothetical protein VITISV_007304 [Vitis vinifera])

HSP 1 Score: 503.1 bits (1294), Expect = 8.5e-139
Identity = 264/472 (55.93%), Postives = 310/472 (65.68%), Query Frame = 1


Query: 2   IVDADVVNLATQQSSWVIDSGASVHATSKREFFASYTSGDFGSVRMGNDKSANTIGIIDV 61
           + D+DVVN A Q+S WVID GAS+HAT +++FF SYTSGDFGSVRMGND SA  IG+ DV
Sbjct: 256 VYDSDVVNFACQESXWVIDXGASIHATPQKDFFTSYTSGDFGSVRMGNDGSAKAIGMGDV 315

Query: 62  HLKNENGSRLILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKL 121
            L+  NG+ L LKNVKHIP IRMNLISTGKLDD+GFCNTF +  WKLT+GSM IAKG K 
Sbjct: 316 RLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQWKLTRGSMVIAKGNKS 375

Query: 122 SSLYYMDAKIIDFDINTMNDEANVKLWHKRLSHISEKGLKILTKKNHLPDPKSTPLKRCP 181
           SSLY M A++ID  IN ++D++  +LWH +L H+SEKGL IL KKN L   K   LKRC 
Sbjct: 376 SSLYLMQARVIDSSINAVDDDSTFELWHNKLGHMSEKGLMILAKKNLLXGMKKGSLKRCA 435

Query: 182 HCLAGKQTRVTFKSSQHSRKPNVLELVYSDVCGPMKTKSLG-----------------VY 241
           HCLAGKQTRV FK+  H+RKP +L+LVYSDV GPMKTK+LG                 VY
Sbjct: 436 HCLAGKQTRVAFKTLHHTRKPGMLDLVYSDVYGPMKTKTLGGSLYFVTFIDDHSRKIWVY 495

Query: 242 TLKTKDQVLQAFKQFHAFVEKETCENLKCVRTDNG------------------------- 301
           TLKTKDQVL  FKQFHA VE+++ E LKC+RTDNG                         
Sbjct: 496 TLKTKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHGFRHQKTPPKT 555

Query: 302 --------------------------------GKTLNTVVHVLNFTPCVPLGSKVPNRIW 361
                                           G+ LNT+VHVLN TPCVPL   VP+RIW
Sbjct: 556 PQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTIVHVLNLTPCVPLEFDVPDRIW 615

Query: 362 SGKDISYSHLCVFGCKAFVHVPKDDISKFDAKTKACVFLGYGQDEFGYKLYDPVKKKLIR 396
           S  +ISY HL VFGCKAFVH+PKD+ SK DAKT+ CVF+GYGQDE GYK YD V+KKL R
Sbjct: 616 SNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQDELGYKFYDLVQKKLXR 675

[Close]

BLAST of Cucsa.235640 vs. NCBI nr
Match: gi|147784778|emb|CAN75440.1| (hypothetical protein VITISV_007304 [Vitis vinifera])

HSP 1 Score: 311.2 bits (796), Expect = 4.7e-81
Identity = 161/270 (59.63%), Postives = 189/270 (70.00%), Query Frame = 1


Query: 502  KVLERFKMSQAKSVSSPLPSHFKLISKQSPSTYKEKEDMNK-----------YVMVCTRP 561
            KV  RF MS+ K VSSPL SHFKL S+ SPST KEKEDM +           Y MVCTRP
Sbjct: 1039 KVFARFNMSKFKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAIGSLMYAMVCTRP 1098

Query: 562  DISHVIGVVSRYMYNPGKQHWEAVKCIMRYLRGTSSLKLTFGNGKPIL------------ 621
            DI++ +GVVSR++ NPG+ HWEAVK IMRYLRGTS LKLTFG+GKPIL            
Sbjct: 1099 DIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDV 1158

Query: 622  -------------AGGAVFWQSRLQKCVALSTTEAEYIAVVETCKEMLWMKRFVQKLGFK 681
                         +GGAV WQSRLQKCVALSTTEAEYIA VE CKE+LWMK F+Q+LGFK
Sbjct: 1159 DNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTEAEYIAAVEACKELLWMKCFMQELGFK 1218

Query: 682  QQRYVIYCDNILIRMLSFVQKLGKNASFHSRTKHIDVRYQWLKDALNDELFELEKIHTNH 736
            QQRYV+YCDN           L KN+++H+R+KHIDVRY W++DALND LFE+EKIHT++
Sbjct: 1219 QQRYVVYCDN------QSAIHLSKNSTYHARSKHIDVRYHWMRDALNDNLFEIEKIHTDN 1278

HSP 2 Score: 109.4 bits (272), Expect = 2.7e-20
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 1


Query: 388 EDEVQNRQLFLHKLVVKGFNQKKGIDFDEIFAPVVKMSSIRVVLGLAASLVLEVEQMDKG 447
           ++E  ++  +  +LVVK    K+  D  EI    VK + +   L     +      + KG
Sbjct: 861 QEEHTSQPRYKARLVVKRVQSKESFDL-EIQQMDVKTAFLHGDLDKEIYMEQPEGFVLKG 920

Query: 448 KEHLVCKLKKSLYGLKQAPRKWYKKFESIMGEQGYRKTTSDHYVFFHKFFDDDFKVL 505
           KE  VCKLKKSLYGLKQAPR+WYKKFES+MGEQGYRKTTSDH VF  KF DDDF +L
Sbjct: 921 KEDYVCKLKKSLYGLKQAPRQWYKKFESVMGEQGYRKTTSDHCVFVQKFSDDDFVIL 976

HSP 3 Score: 470.7 bits (1210), Expect = 4.7e-129
Identity = 250/472 (52.97%), Postives = 302/472 (63.98%), Query Frame = 1


Query: 2   IVDADVVNLATQQSSWVIDSGASVHATSKREFFASYTSGDFGSVRMGNDKSANTIGIIDV 61
           + D+DVVN A Q++SWVIDSGAS+HAT +++FF SYT  DFGSVRMGND  A  IG+ DV
Sbjct: 30  VYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTFSDFGSVRMGNDGLAKAIGMGDV 89

Query: 62  HLKNENGSRLILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKL 121
            L+  NG+ L LKNVKHIP IRMNLIST KLDD+G CNTF +  WKLT+GSM I K  K 
Sbjct: 90  RLETSNGTMLTLKNVKHIPDIRMNLISTRKLDDEGLCNTFRDSQWKLTRGSMVITKENKS 149

Query: 122 SSLYYMDAKIIDFDINTMNDEANVKLWHKRLSHISEKGLKILTKKNHLPDPKSTPLKRCP 181
           SSLY M  ++ID  IN ++D++  KLWH RLSH+SEKGL I+ KKN L   K   LKRC 
Sbjct: 150 SSLYLMQVRVIDSSINAVDDDSTFKLWHNRLSHMSEKGLMIMAKKNLLSGMKKGSLKRCA 209

Query: 182 HCLAGKQTRVTFKSSQHSRKPNVLELVYSDVCGPMKTKSLG-----------------VY 241
           HCL GKQTRV FK+  H+RKP +L+LVYSDVCGPMKTK+LG                 VY
Sbjct: 210 HCLGGKQTRVAFKTLHHTRKPGMLDLVYSDVCGPMKTKTLGGSLYFVTFIDDHSRKIWVY 269

Query: 242 TLKTKDQVLQAFKQFHAFVEKETCENLKCVRTDNGGK----------------------- 301
           TLKTKDQVL  FKQFHA VE+++ E LKC++ DNGG+                       
Sbjct: 270 TLKTKDQVLDVFKQFHALVERQSGEKLKCIQIDNGGEYSSPFDEYCRQHGIRHQKTPPKT 329

Query: 302 -TLNTVVHVLNFT-----PCV----------------------------PLGSKVPNRIW 361
             LN +   +N T      C+                            PL   VP+RIW
Sbjct: 330 PQLNGLAESMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHLLNLTPCVPLEFDVPDRIW 389

Query: 362 SGKDISYSHLCVFGCKAFVHVPKDDISKFDAKTKACVFLGYGQDEFGYKLYDPVKKKLIR 396
           S  +I Y HL VFGCKAFVH+PKD+ISK DAKT+ CVF+GYG DE GY+ YDP++KKL+R
Sbjct: 390 SNNEICYDHLRVFGCKAFVHIPKDEISKLDAKTRPCVFIGYGHDELGYRFYDPMQKKLVR 449

[Close]

BLAST of Cucsa.235640 vs. NCBI nr
Match: gi|147770163|emb|CAN65406.1| (hypothetical protein VITISV_030853 [Vitis vinifera])

HSP 1 Score: 286.6 bits (732), Expect = 1.3e-73
Identity = 181/391 (46.29%), Postives = 220/391 (56.27%), Query Frame = 1


Query: 388 EDEVQNRQLFLHKLVVKGFNQKKGIDFDEIFAPVVKMSSIRVVLGLAASLVLEVEQMDKG 447
           ++E  ++  +  +LVVKGFNQKK  +               + +      VL      KG
Sbjct: 615 QEEHTSQPRYKARLVVKGFNQKKDKE---------------IYMEQQEGFVL------KG 674

Query: 448 KEHLVCKLKKSLYGLKQAPR----------KWYKKF--------ESIMGEQGYRKTTSDH 507
           KE  V KLKKSLYGLKQAPR          +  K F        + I+G +  R   S  
Sbjct: 675 KEDYVSKLKKSLYGLKQAPRNVSRIDNLKKQLSKSFAMKDLGPVKRILGIRIERDRASKK 734

Query: 508 YVFFHKFFDDDFKVLERFKMSQAKSVSSPLPSHFKLISKQSPSTYKEKEDMNKYVMVCTR 567
                + + +  KVL RF MS+AK VSSPL SHFKL S+ SPST KEKEDM +       
Sbjct: 735 LCMLQEQYIE--KVLARFNMSKAKVVSSPLTSHFKLSSRHSPSTDKEKEDMRRVSYALAG 794

Query: 568 PDISHVIGVVSRYMYNPGKQHWEAVKCIMRYLRGTSSLKLTFGNGKPIL----------- 627
             + +V+               EAVK IMRYLRGTS LKLTFG GKPIL           
Sbjct: 795 GSLMYVM---------------EAVKWIMRYLRGTSKLKLTFGGGKPILVGYTDSDMAGD 854

Query: 628 --------------AGGAVFWQSRLQKCVALSTTEAEYIAVVETCKEMLWMKRFVQKLGF 687
                         +GGAV WQSRLQKCVALSTTEAEYIA  E CKE+LWMK F+Q+LGF
Sbjct: 855 VDNRRSTSGYLMTCSGGAVSWQSRLQKCVALSTTEAEYIAAAEACKELLWMKCFMQELGF 914

Query: 688 KQQRYVIYCDNILIRMLSFVQKLGKNASFHSRTKHIDVRYQWLKDALNDELFELEKIHTN 736
           KQQRYV+YCDN           L KN+++H+R+KHI VRY W++DALND L E+EKIHTN
Sbjct: 915 KQQRYVVYCDN------QSPIHLSKNSTYHARSKHIHVRYHWMRDALNDNLLEIEKIHTN 961

HSP 2 Score: 451.4 bits (1160), Expect = 2.9e-123
Identity = 235/415 (56.63%), Postives = 283/415 (68.19%), Query Frame = 1


Query: 2   IVDADVVNLATQQSSWVIDSGASVHATSKREFFASYTSGDFGSVRMGNDKSANTIGIIDV 61
           + D+DVVN A  ++SWVIDSGAS+HAT +++FF SYTS             A  IG+ DV
Sbjct: 241 VYDSDVVNFACXETSWVIDSGASIHATLRKDFFTSYTS-------------AKAIGMGDV 300

Query: 62  HLKNENGSRLILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKL 121
            L+  NG+ L LKNVKHIP IRMNLIST KLDD+GFCNTF +  W LT+GSM IAKG K 
Sbjct: 301 RLETSNGTMLTLKNVKHIPDIRMNLISTRKLDDEGFCNTFRDSQWNLTRGSMVIAKGNKS 360

Query: 122 SSLYYMDAKIIDFDINTMNDEANVKLWHKRLSHISEKGLKILTKKNHLPDPKSTPLKRCP 181
           SSLY M A++ID +IN ++D++  +LWH RL H+SEKGL IL KKN L   K   LKRC 
Sbjct: 361 SSLYLMQARVIDSNINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSGMKKGSLKRCA 420

Query: 182 HCLAGKQTRVTFKSSQHSRKPNVLELVYSDVCGPMKTKSLG-----------------VY 241
           HCLAGKQTRV FK+  H+RKP +L+LVYSDVCGPMKTK+L                  VY
Sbjct: 421 HCLAGKQTRVAFKTLHHTRKPGMLDLVYSDVCGPMKTKTLSESLYFVTFIDDHSRKIWVY 480

Query: 242 TLKTKDQVLQAFKQFHAFVEKETCENLKCVRTDNGGKTLNTVVHVLNFTPCVPLGSKVPN 301
           TLKTKDQVL  FKQFHA VE+++ E LKC+R DNGG+             C      VP+
Sbjct: 481 TLKTKDQVLDVFKQFHALVERQSGEKLKCIRIDNGGEYSGPFDEY-----CRQXEFDVPD 540

Query: 302 RIWSGKDISYSHLCVFGCKAFVHVPKDDISKFDAKTKACVFLGYGQDEFGYKLYDPVKKK 361
           RIWS  +ISY HL VFGCKAFVH+PK + SK DAKT+ CVF+GY QDE GY+ YDPV+KK
Sbjct: 541 RIWSNNEISYDHLRVFGCKAFVHIPKYERSKLDAKTRPCVFIGYDQDELGYRFYDPVQKK 600

Query: 362 LIRSRDVVFVEDQTIADIEKI----AKHSDNLIDLSSTSLTQSSTQIEDEVQNRQ 396
           L+RSRDVV +ED TI DI K     ++HS +LIDL    LT   TQ+EDE  + Q
Sbjct: 601 LVRSRDVVXMEDHTIQDIXKTNPMESQHSXDLIDLDPAPLTNLPTQVEDEAHDDQ 637

[Close]

BLAST of Cucsa.235640 vs. NCBI nr
Match: gi|147776056|emb|CAN69911.1| (hypothetical protein VITISV_027081 [Vitis vinifera])

HSP 1 Score: 304.3 bits (778), Expect = 5.8e-79
Identity = 158/270 (58.52%), Postives = 186/270 (68.89%), Query Frame = 1


Query: 502  KVLERFKMSQAKSVSSPLPSHFKLISKQSPSTYKEKEDMNK-----------YVMVCTRP 561
            K+L RF MS+AK VSSPL SHFKL S+ +PST KEKEDM +           YVMVCTRP
Sbjct: 885  KMLARFNMSKAKVVSSPLASHFKLSSRHNPSTDKEKEDMRRVSYASAVGSLMYVMVCTRP 944

Query: 562  DISHVIGVVSRYMYNPGKQHWEAVKCIMRYLRGTSSLKLTFGNGKPIL------------ 621
            DI++ IGVV R++ NPG+ HWEAVK IMRYLRGTS LKLTFG GKPIL            
Sbjct: 945  DIAYAIGVVIRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGGGKPILVGYTDSDMAGDV 1004

Query: 622  -------------AGGAVFWQSRLQKCVALSTTEAEYIAVVETCKEMLWMKRFVQKLGFK 681
                         +GG V WQSR QKCVALSTTEAEYIA  E C E+LWMK F+Q+LGFK
Sbjct: 1005 DNRRSTLGYLMTFSGGTVSWQSRQQKCVALSTTEAEYIAAXEACNELLWMKCFMQELGFK 1064

Query: 682  QQRYVIYCDNILIRMLSFVQKLGKNASFHSRTKHIDVRYQWLKDALNDELFELEKIHTNH 736
            QQRYV+YCDN           L KN+++H+R+KHIDVRY W++DALND LFE+EKIHT++
Sbjct: 1065 QQRYVVYCDN------QSAIHLSKNSTYHARSKHIDVRYHWMRDALNDNLFEIEKIHTDN 1124

HSP 2 Score: 84.7 bits (208), Expect = 7.2e-13
Identity = 44/73 (60.27%), Postives = 55/73 (75.34%), Query Frame = 1


Query: 388 EDEVQNRQLFLHKLVVKGFNQKKGIDFDEIFAPVVKMSSIRVVLGLAASLVLEVEQMDKG 447
           ++E  ++  +  +L+VKGFNQKKG DFDEIF+PVVKMSSIRVVLGLAASL LE++QMD  
Sbjct: 733 QEEHTSQPXYKARLIVKGFNQKKGXDFDEIFSPVVKMSSIRVVLGLAASLDLEIQQMDVK 792

Query: 448 KEHLVCKLKKSLY 461
              L   L K +Y
Sbjct: 793 TAFLHGDLXKEIY 805

HSP 3 Score: 449.1 bits (1154), Expect = 1.5e-122
Identity = 240/442 (54.30%), Postives = 285/442 (64.48%), Query Frame = 1


Query: 32  EFFASYTSGDFGSVRMGNDKSANTIGIIDVHLKNENGSRLILKNVKHIPYIRMNLISTGK 91
           +FF SYTSGDFGSVRMGND SA  IG+ +V L+  NG+ L LKNVKHIP IRMNLISTGK
Sbjct: 189 DFFTSYTSGDFGSVRMGNDDSAKAIGMRNVRLETSNGTMLTLKNVKHIPDIRMNLISTGK 248

Query: 92  LDDKGFCNTFDNGIWKLTKGSMDIAKGQKLSSLYYMDAKIIDFDINTMNDEANVKLWHKR 151
           LDD+GF N F +  WKLT+GSM IAKG K SSLY M  ++ID  IN ++D++  +LWH R
Sbjct: 249 LDDEGFYNIFRDSQWKLTRGSMVIAKGNKSSSLYLMQTRVIDSSINAVDDDSTFELWHNR 308

Query: 152 LSHISEKGLKILTKKNHLPDPKSTPLKRCPHCLAGKQTRVTFKSSQHSRKPNVLELVYSD 211
           L H+SEKGL IL KKN L   K   LKRC HCLAGKQTRV FK+ +++RKP +L+LVYSD
Sbjct: 309 LGHMSEKGLMILAKKNLLSGMKKGSLKRCAHCLAGKQTRVAFKTLRYTRKPGMLDLVYSD 368

Query: 212 VCGPMKTKSLG-----------------VYTLKTKDQVLQAFKQFHAFVEKETCENLKCV 271
           VCGPMKTK+LG                 VYTLKTKDQVL  FKQFHA VE+++ E LKC+
Sbjct: 369 VCGPMKTKTLGGSLYFVTFIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCI 428

Query: 272 RTDNGGK------------------------TLNTVVHVLNF------------------ 331
           RTDNGG+                         LN +   +N                   
Sbjct: 429 RTDNGGEYSSPFDEYCRQHGIRHQKTSPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRS 488

Query: 332 ---------------TPCVPLGSKVPNRIWSGKDISYSHLCVFGCKAFVHVPKDDISKFD 391
                          TPCVPL   VP+RIWS  +ISY HL VFGCKAFVH+PKD+ SK D
Sbjct: 489 FWGEALNTVVHVLNLTPCVPLEFDVPDRIWSKNEISYDHLRVFGCKAFVHIPKDERSKLD 548

Query: 392 AKTKACVFLGYGQDEFGYKLYDPVKKKLIRSRDVVFVEDQTIADIEKI----AKHSDNLI 396
           AKT+ CVF+GYGQDE GY+ YDPV+KKL+RSRDVVF+ED TI DIEK     ++HS +LI
Sbjct: 549 AKTRPCVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHSGDLI 608

[Close]

BLAST of Cucsa.235640 vs. NCBI nr
Match: gi|147836424|emb|CAN77602.1| (hypothetical protein VITISV_024474 [Vitis vinifera])

HSP 1 Score: 319.7 bits (818), Expect = 1.3e-83
Identity = 200/428 (46.73%), Postives = 237/428 (55.37%), Query Frame = 1


Query: 388  EDEVQNRQLFLHKLVVKGFNQKKGIDFDEIFAPVVKMSSIRVVLGLAASLVLEVEQMD-- 447
            ++E  ++  +  +LVVKGFNQKKGIDFDEIF PVVKMSSIRVVLGLAASL LE++QMD  
Sbjct: 764  QEEHTSQPRYKARLVVKGFNQKKGIDFDEIFFPVVKMSSIRVVLGLAASLDLEIQQMDVK 823

Query: 448  ----------------------KGKEHLVCKLKKSLYGLKQAPRKWY------------K 507
                                  KGKE  VCKLKKSLYGLKQAPR+W             K
Sbjct: 824  TAFLHGNLDKEIYMEQPEGFVLKGKEDYVCKLKKSLYGLKQAPRQWNVSRIDNLKKQLSK 883

Query: 508  KF--------ESIMGEQGYRKTTSDHYVFFHKFFDDDFKVLERFKMSQAKSVSSPLPSHF 567
             F        + I+G +  R   S       + + ++  VL RF MS+AK VSSPL SHF
Sbjct: 884  SFAMKDLGPVKRILGIRIERDRASKKLCMLQEQYIEN--VLARFNMSKAKVVSSPLASHF 943

Query: 568  KLISKQSPSTYKEKEDMNK-----------YVMVCTRPDISHVIGVVSRYMYNPGKQHWE 627
            KL S+ SPST KEKEDM +           Y MVCTRPDI++ IGVVSR++ NPG+ HWE
Sbjct: 944  KLSSRHSPSTDKEKEDMRRVPYASAVGSLMYAMVCTRPDIAYAIGVVSRFLSNPGRHHWE 1003

Query: 628  AVKCIMRYLRGTSSLKLTFGNGKPIL-------------------------AGGAVFWQS 687
            AVK IMRYLRGTS LKLTFG+GKPIL                         +GGAV WQS
Sbjct: 1004 AVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRRXTSGYLMTFSGGAVSWQS 1063

Query: 688  RLQKCVALSTTEAEYIAVVETCKEMLWMKRFVQKLGFKQQRYVIYCDNILIRMLSFVQKL 736
            RLQKCVALSTTEA+YIA  E CKE+LW K F+Q+LGFKQQRY +YCDN            
Sbjct: 1064 RLQKCVALSTTEAKYIATAEACKELLWXKCFMQELGFKQQRYXVYCDN------------ 1123

HSP 2 Score: 443.4 bits (1139), Expect = 8.0e-121
Identity = 240/468 (51.28%), Postives = 287/468 (61.32%), Query Frame = 1


Query: 2   IVDADVVNLATQQSSWVIDSGASVHATSKREFFASYTSGDFGSVRMGNDKSANTIGIIDV 61
           + D+DVVN A Q++SWVIDSGAS+HAT +++FF SYTSGDFGSVRMGND SA  IG+ DV
Sbjct: 143 VYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVRMGNDGSAKAIGMGDV 202

Query: 62  HLKNENGSRLILKNVKHIPYIRMNLISTGKLDDKGFCNTFDNGIWKLTKGSMDIAKGQKL 121
            L+  NG+ L LKNVKHIP IRMNLISTGKLDD+GF NTF +  WKLT+GSM IAKG K 
Sbjct: 203 RLETSNGTMLTLKNVKHIPDIRMNLISTGKLDDEGFXNTFRDSQWKLTRGSMXIAKGNKS 262

Query: 122 SSLYYMDAKIIDFDINTMNDEANVKLWHKRLSHISEKGLKILTKKNHLPDPKSTPLKRCP 181
           SSLY M A++ID  IN ++D++  +LWH RL H+SEKGL IL KKN L   K   LKRC 
Sbjct: 263 SSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSXMKKGSLKRCA 322

Query: 182 HCLAGKQTRVTFKSSQHSRKPNVLELVYSDVCGPMKTKSLG-----------------VY 241
           HCLAGK TRV FK+  H+RKP +L+LVY DVCGPMKTK+L                  VY
Sbjct: 323 HCLAGKXTRVAFKTLHHTRKPGMLDLVYFDVCGPMKTKTLXGSLYFVTFIDDHSRKIWVY 382

Query: 242 TLKTKDQVLQAFKQFHAFVEKETCENLKCVRTDNGG------------------------ 301
           TLK KDQVL  FKQFHA VE+++ E LKC+RTDNGG                        
Sbjct: 383 TLKXKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHGIRHQKTPPKT 442

Query: 302 -----------KTLNTVVHVL----------------------NFTPCVPLGSKVPNRIW 361
                      +TL   V  L                      N TPCVPL   VP+RIW
Sbjct: 443 PQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIW 502

Query: 362 SGKDISYSHLCVFGCKAFVHVPKDDISKFDAKTKACVFLGYGQDEFGYKLYDPVKKKLIR 396
           S  +ISY HL VFGCKAFVH+PKD+ SK DAKT+ CVF+GYGQDE GY+ YD V+KKL+ 
Sbjct: 503 SNNEISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQDELGYRFYDSVQKKLV- 562

The following BLAST results are available for this feature:

BLAST of Cucsa.235640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLX_TOBAC	5.4e-69	45.97	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
COPIA_DROME	3.7e-25	28.63	Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3	[more]
M300_ARATH	2.2e-14	39.47	Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana GN=AtMg0...	[more]
M810_ARATH	2.0e-07	25.61	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0...	[more]

BLAST of Cucsa.235640 vs. TrEMBL


Match Name	E-value	Identity	Description
A5C9D7_VITVI	5.9e-139	55.93	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007304 PE=4 SV=1	[more]
A5C9D7_VITVI	3.3e-81	59.63	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007304 PE=4 SV=1	[more]
A5B9T5_VITVI	8.7e-74	46.29	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030853 PE=4 SV=1	[more]
A5BAF2_VITVI	4.0e-79	58.52	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027081 PE=4 SV=1	[more]
A5C540_VITVI	9.3e-84	46.73	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024474 PE=4 SV=1	[more]

BLAST of Cucsa.235640 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00300.1	1.3e-15	39.47	ATMG00300.1 Gag-Pol-related retrotransposon family protein	[more]
AT4G23160.1	1.0e-12	33.88	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.1e-08	25.61	ATMG00810.1 DNA/RNA polymerases superfamily protein	[more]

BLAST of Cucsa.235640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147784778\|emb\|CAN75440.1\|	8.5e-139	55.93	hypothetical protein VITISV_007304 [Vitis vinifera]	[more]
gi\|147784778\|emb\|CAN75440.1\|	4.7e-81	59.63	hypothetical protein VITISV_007304 [Vitis vinifera]	[more]
gi\|147770163\|emb\|CAN65406.1\|	1.3e-73	46.29	hypothetical protein VITISV_030853 [Vitis vinifera]	[more]
gi\|147776056\|emb\|CAN69911.1\|	5.8e-79	58.52	hypothetical protein VITISV_027081 [Vitis vinifera]	[more]
gi\|147836424\|emb\|CAN77602.1\|	1.3e-83	46.73	hypothetical protein VITISV_024474 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013103	RVT_2
IPR025724	GAG-pre-integrase_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0090304	nucleic acid metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0043167	ion binding
molecular_function	GO:0097159	organic cyclic compound binding
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.235640.1	Cucsa.235640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 446..499 score: 1.2E-14coord: 398..445 score: 3.1
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 124..188 score: 3.1
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 17..649 score: 4.7E
None	No IPR available	PANTHER	PTHR11439:SF193	SUBFAMILY NOT NAMED	coord: 17..649 score: 4.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.235640	CSPI01G19390	Wild cucumber (PI 183967)	cgycpiB348

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.235640	Cucumber (Chinese Long) v3	cgycucB353
Cucsa.235640	Watermelon (97103) v2	cgywmbB412
Cucsa.235640	Wax gourd	cgywgoB465
Cucsa.235640	Cucurbita maxima (Rimu)	cgycmaB0648
Cucsa.235640	Cucurbita maxima (Rimu)	cgycmaB0649
Cucsa.235640	Cucurbita moschata (Rifu)	cgycmoB0649
Cucsa.235640	Cucurbita moschata (Rifu)	cgycmoB0650
Cucsa.235640	Wild cucumber (PI 183967)	cgycpiB349
Cucsa.235640	Cucumber (Chinese Long) v2	cgycuB333
Cucsa.235640	Melon (DHL92) v3.5.1	cgymeB396
Cucsa.235640	Watermelon (Charleston Gray)	cgywcgB411
Cucsa.235640	Watermelon (97103) v1	cgywmB438
Cucsa.235640	Cucurbita pepo (Zucchini)	cgycpeB0618
Cucsa.235640	Cucurbita pepo (Zucchini)	cgycpeB0619
Cucsa.235640	Bottle gourd (USVL1VR-Ls)	cgylsiB382
Cucsa.235640	Melon (DHL92) v3.6.1	cgymedB394
Cucsa.235640	Silver-seed gourd	carcgyB0042
Cucsa.235640	Silver-seed gourd	carcgyB0157