Cucsa.235560 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.235560
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Transmembrane protein, putative
Location	scaffold02012 : 83774 .. 84829 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGCTTGAGAGAGATGCAGGGAACTTCCAAGGTGATATTGGGAGCTACACTGATAATGGTGGTTAGTCTTGCCATTGTATTAGGCCTCATTCTTGTGTTGCTTGCCGAGCTCTACTGTTCTCTCTTACTCCGCCGTCGTAGGCTTCGAGTTGCCCCGCCCACCACCACTTCCTCCAACTTGCCTGGTGACCTCGTCGCAACTGCCACCAACATTTCCCAGTCTCTGCCTTCAGCTCATCGCAGGGACAACAACCGATCAGCTATTTCTCTTAGCAGCTTGTATGCTCATGGGGTTCTTAGTGCTCCCAGAAACTTTCTTTTCCCTACTGTCCCTTGTGTAAAAGACAACAATGTAGATGATGTAGCTGAACCTGAAGCCAAGAGCCAAAGCTCTCAACTTCATCGGATTATCGACATTGACACCCTTGAATCATCCCTTAGCCCTCGTCCAATCGGCCTCATTTCCACTCCATCCCTCCCATCATCGCCCATTATATCAGCCTCACCTGATGTGTCCATTTTGAAAGCATGTGCTCAGAGTAAATTAAGCCCTGCCATTGCTTGTAATGACAGTTCTTCCAATGGCAGTGACCATTTCATGTACATTTCAAACCCCATCTATGATAATGATGCAATCAGGCCAAGCAGAGGAGAGAACACCCCATTTGAAACACCTAACTCCTCTCCCTCAAGATTGGAAAGATGTAGTTCTTCAGAGGAAGATGAGATTGTAGCATCTCTTTCAAGTACAATCCATTCACTCCCCAATACGCCTCCTTTAACGCCGATGAAGAAGCTCCCGGCCGAGGCTTGCTCGGTTACATTGAGAGATGCCAGGTCTCTGGGGAATTCTGGAAGTGATTCTAACACCCACAATGGTTTGTCATCTTCCTCCTCTGGTTCTCCCTGTACCTCACCTTCATGGTGAATGCAATTCAATGGCTGAAGTTTAGATTTAGTGTCATATCAGAGCTATCTTTACAGCTTTGTCGTTAACTTTCTATGGTGGGTATGTATTGAATGTGGTGATGAAGAAGAAAGTAGTGAGTTTCTG

mRNA sequence

GAAAGCTTGAGAGAGATGCAGGGAACTTCCAAGGTGATATTGGGAGCTACACTGATAATGGTGGTTAGTCTTGCCATTGTATTAGGCCTCATTCTTGTGTTGCTTGCCGAGCTCTACTGTTCTCTCTTACTCCGCCGTCGTAGGCTTCGAGTTGCCCCGCCCACCACCACTTCCTCCAACTTGCCTGGTGACCTCGTCGCAACTGCCACCAACATTTCCCAGTCTCTGCCTTCAGCTCATCGCAGGGACAACAACCGATCAGCTATTTCTCTTAGCAGCTTGTATGCTCATGGGGTTCTTAGTGCTCCCAGAAACTTTCTTTTCCCTACTGTCCCTTGTGTAAAAGACAACAATGTAGATGATGTAGCTGAACCTGAAGCCAAGAGCCAAAGCTCTCAACTTCATCGGATTATCGACATTGACACCCTTGAATCATCCCTTAGCCCTCGTCCAATCGGCCTCATTTCCACTCCATCCCTCCCATCATCGCCCATTATATCAGCCTCACCTGATGTGTCCATTTTGAAAGCATGTGCTCAGAGTAAATTAAGCCCTGCCATTGCTTGTAATGACAGTTCTTCCAATGGCAGTGACCATTTCATGTACATTTCAAACCCCATCTATGATAATGATGCAATCAGGCCAAGCAGAGGAGAGAACACCCCATTTGAAACACCTAACTCCTCTCCCTCAAGATTGGAAAGATGTAGTTCTTCAGAGGAAGATGAGATTGTAGCATCTCTTTCAAGTACAATCCATTCACTCCCCAATACGCCTCCTTTAACGCCGATGAAGAAGCTCCCGGCCGAGGCTTGCTCGGTTACATTGAGAGATGCCAGGTCTCTGGGGAATTCTGGAAGTGATTCTAACACCCACAATGGTTTGTCATCTTCCTCCTCTGGTTCTCCCTGTACCTCACCTTCATGGTGAATGCAATTCAATGGCTGAAGTTTAGATTTAGTGTCATATCAGAGCTATCTTTACAGCTTTGTCGTTAACTTTCTATGGTGGGTATGTATTGAATGTGGTGATGAAGAAGAAAGTAGTGAGTTTCTG

Coding sequence (CDS)

ATGCAGGGAACTTCCAAGGTGATATTGGGAGCTACACTGATAATGGTGGTTAGTCTTGCCATTGTATTAGGCCTCATTCTTGTGTTGCTTGCCGAGCTCTACTGTTCTCTCTTACTCCGCCGTCGTAGGCTTCGAGTTGCCCCGCCCACCACCACTTCCTCCAACTTGCCTGGTGACCTCGTCGCAACTGCCACCAACATTTCCCAGTCTCTGCCTTCAGCTCATCGCAGGGACAACAACCGATCAGCTATTTCTCTTAGCAGCTTGTATGCTCATGGGGTTCTTAGTGCTCCCAGAAACTTTCTTTTCCCTACTGTCCCTTGTGTAAAAGACAACAATGTAGATGATGTAGCTGAACCTGAAGCCAAGAGCCAAAGCTCTCAACTTCATCGGATTATCGACATTGACACCCTTGAATCATCCCTTAGCCCTCGTCCAATCGGCCTCATTTCCACTCCATCCCTCCCATCATCGCCCATTATATCAGCCTCACCTGATGTGTCCATTTTGAAAGCATGTGCTCAGAGTAAATTAAGCCCTGCCATTGCTTGTAATGACAGTTCTTCCAATGGCAGTGACCATTTCATGTACATTTCAAACCCCATCTATGATAATGATGCAATCAGGCCAAGCAGAGGAGAGAACACCCCATTTGAAACACCTAACTCCTCTCCCTCAAGATTGGAAAGATGTAGTTCTTCAGAGGAAGATGAGATTGTAGCATCTCTTTCAAGTACAATCCATTCACTCCCCAATACGCCTCCTTTAACGCCGATGAAGAAGCTCCCGGCCGAGGCTTGCTCGGTTACATTGAGAGATGCCAGGTCTCTGGGGAATTCTGGAAGTGATTCTAACACCCACAATGGTTTGTCATCTTCCTCCTCTGGTTCTCCCTGTACCTCACCTTCATGGTGA

Protein sequence

MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDLVATATNISQSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEPEAKSQSSQLHRIIDIDTLESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKLSPAIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERCSSSEEDEIVASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCTSPSW*

Homology

[Close]

BLAST of Cucsa.235560 vs. TrEMBL
Match: A0A0A0LWW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G366990 PE=4 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 4.8e-167
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1


Query: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDL 60
           MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDL
Sbjct: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDL 60

Query: 61  VATATNISQSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120
           VATATNISQSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP
Sbjct: 61  VATATNISQSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120

Query: 121 EAKSQSSQLHRIIDIDTLESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKLSP 180
           EAKSQSSQLHRIIDIDTLESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKLSP
Sbjct: 121 EAKSQSSQLHRIIDIDTLESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKLSP 180

Query: 181 AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERCSSSEEDEIV 240
           AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERCSSSEEDEIV
Sbjct: 181 AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERCSSSEEDEIV 240

Query: 241 ASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT 300
           ASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT
Sbjct: 241 ASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT 300

Query: 301 SPSW 305
           SPSW
Sbjct: 301 SPSW 304

[Close]

BLAST of Cucsa.235560 vs. TrEMBL
Match: U5FHE2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s05840g PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.6e-75
Identity = 171/308 (55.52%), Postives = 211/308 (68.51%), Query Frame = 1


Query: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDL 60
           M+G+SK+I+GATL MVVSLAIVL L+LVLLAELYCSLLLRRR+LR    TTTS+      
Sbjct: 1   MKGSSKIIMGATLAMVVSLAIVLALVLVLLAELYCSLLLRRRQLRSTSNTTTSAT----- 60

Query: 61  VATATNISQSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120
             T +  + SL  + +  N   ++ LSS YA GVL AP++FLFP V   K+N        
Sbjct: 61  TTTTSTTNTSLSQSPQPQNQPPSLPLSSYYAQGVLRAPKSFLFPAVSPNKENK-----SA 120

Query: 121 EAKSQSSQLHRIIDIDT--LESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKL 180
           E + + SQLHR++++ T  L   LSP+ IGLI+  S PS+  +S+   V       +S  
Sbjct: 121 ETRKEHSQLHRVLEVHTQVLNPGLSPQQIGLINI-SPPSTAFVSSPHQVEENPVQIRS-- 180

Query: 181 SPAIACNDSSSNG-SDHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERC-SSSEE 240
             + ACN     G  +H +YISNPIYDNDA RPS  + TP+ETP+SSPSRLE C SSS E
Sbjct: 181 --SNACNVRECAGCGEHLVYISNPIYDNDASRPSTVD-TPYETPDSSPSRLETCGSSSGE 240

Query: 241 DEIVASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSG 300
           +EI     S  HS+P TPPLTPMKKLPA+ACSV+LRDARSLG SGSDS ++NGLSSSSSG
Sbjct: 241 EEIALPSPSAPHSVPGTPPLTPMKKLPAKACSVSLRDARSLGTSGSDSVSNNGLSSSSSG 292

Query: 301 SPCTSPSW 305
           SPCTSPSW
Sbjct: 301 SPCTSPSW 292

[Close]

BLAST of Cucsa.235560 vs. TrEMBL
Match: B9RKS5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1053120 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 8.3e-71
Identity = 182/317 (57.41%), Postives = 211/317 (66.56%), Query Frame = 1


Query: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDL 60
           M+  SKVI+GATL+MVVSLAIVLGL+LVLLAELYC+LLLRRR+LR+     TSSN P   
Sbjct: 1   MKEASKVIMGATLVMVVSLAIVLGLVLVLLAELYCTLLLRRRQLRI-----TSSN-PTTT 60

Query: 61  VATATNISQSLPSA------HRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNV 120
            ATAT IS S P+A      H    N SA S  S YA G+L APR+  FP     K+N  
Sbjct: 61  TATATIISAS-PAANASSPEHSLPQNHSA-SPHSYYAPGILQAPRSLFFPAAS-YKENKA 120

Query: 121 DDVAEPEAKSQSSQLHRIIDIDTLESSLSPRPIGLISTPSLPSSPIISASPDVSILKACA 180
                 E K+Q SQLH I+D+ T E + SP+ IGL+ T   PSS  ++  P   I +   
Sbjct: 121 -----AETKNQLSQLHHILDVHTQELNTSPQRIGLVKTS--PSSTSLATLPH-QIREIPI 180

Query: 181 QSKLSPAIACNDSSSNGS--DHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLER-- 240
           Q   + A   ND +  G   + F+YISNPIYDNDA RPSR E TPFETP+SSPSRLE   
Sbjct: 181 QISSANA---NDKACIGGVGESFVYISNPIYDNDASRPSRVE-TPFETPDSSPSRLETGG 240

Query: 241 ---CSSSEEDEIVASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTH 300
               SSS E+EI     S+  SLP TPPLTPMKKLPAEACSV+LRDARSLG SGSDS + 
Sbjct: 241 SSSSSSSGEEEIAQPSPSSPRSLPLTPPLTPMKKLPAEACSVSLRDARSLGTSGSDSVSI 296

Query: 301 NGLSSSSSGSPCTSPSW 305
           NGLSSSSSGSPCTSPSW
Sbjct: 301 NGLSSSSSGSPCTSPSW 296

[Close]

BLAST of Cucsa.235560 vs. TrEMBL
Match: V4UEA5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010509mg PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.2e-70
Identity = 173/309 (55.99%), Postives = 203/309 (65.70%), Query Frame = 1


Query: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDL 60
           M+G SKVI+GATLIMVVSLAIVLGL+LVLL ELYCSLLLRRRRLR               
Sbjct: 1   MKGASKVIVGATLIMVVSLAIVLGLVLVLLIELYCSLLLRRRRLR--------------- 60

Query: 61  VATATNISQSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120
             T TNIS SLP+   +   +SA  LSS YA GVL APR+ LFP V   K+  V      
Sbjct: 61  -NTTTNISSSLPT---QTQEQSASPLSSFYAQGVLDAPRSLLFPDVSS-KETKV------ 120

Query: 121 EAKSQSSQLHR-IIDIDTLESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKLS 180
           E K+QS Q H  ++DI T E + SP  +G+IS  S P+  I S  P          +++ 
Sbjct: 121 EMKNQSFQPHHSVLDIHTQEPNTSPHCLGIISQSSPPTPFITSPWPTQD-----TAAQVG 180

Query: 181 PAIACNDSSSNGS---DHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERCS-SSE 240
              A ND +  GS   +HF+YISNPIYDNDA R S  + TPFETP++SPSRLE    SS 
Sbjct: 181 SNSARNDKARGGSIGGEHFVYISNPIYDNDASRLSMAD-TPFETPDTSPSRLESGGGSSS 240

Query: 241 EDEIVASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSS 300
           EDEI  +  S+   +PNTPPLTPMKKLPAEACSV+LRDARSLG SGSDS ++NG SSSSS
Sbjct: 241 EDEIAPASPSSPQPVPNTPPLTPMKKLPAEACSVSLRDARSLGTSGSDSVSNNGHSSSSS 277

Query: 301 GSPCTSPSW 305
           GS CTSPSW
Sbjct: 301 GSACTSPSW 277

[Close]

BLAST of Cucsa.235560 vs. TrEMBL
Match: A0A067E738_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023809mg PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.4e-70
Identity = 172/309 (55.66%), Postives = 203/309 (65.70%), Query Frame = 1


Query: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDL 60
           M+G SKVI+GATLIMVVSLAIVLGL+LVLL ELYCSLLLRRRRLR               
Sbjct: 1   MKGASKVIVGATLIMVVSLAIVLGLVLVLLIELYCSLLLRRRRLR--------------- 60

Query: 61  VATATNISQSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120
             T TNIS SLP+   +   +SA  LSS YA GVL APR+ LFP V   K+  V      
Sbjct: 61  -NTTTNISSSLPT---QTQEQSASPLSSFYAQGVLDAPRSLLFPDVSS-KETKV------ 120

Query: 121 EAKSQSSQLHR-IIDIDTLESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKLS 180
           E K+QS Q H  +++I T E + SP  +G+IS  S P+  I S  P          +++ 
Sbjct: 121 EMKNQSFQPHHSVLEIHTQEPNTSPHCLGIISQSSPPTPFITSPRPTQD-----TAAQVG 180

Query: 181 PAIACNDSSSNGS---DHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERCS-SSE 240
              A ND +  GS   +HF+YISNPIYDNDA R S  + TPFETP++SPSRLE    SS 
Sbjct: 181 SNSARNDKARGGSIGGEHFVYISNPIYDNDASRLSMAD-TPFETPDTSPSRLESGGGSSS 240

Query: 241 EDEIVASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSS 300
           EDEI  +  S+   +PNTPPLTPMKKLPAEACSV+LRDARSLG SGSDS ++NG SSSSS
Sbjct: 241 EDEIAPASPSSPQPVPNTPPLTPMKKLPAEACSVSLRDARSLGTSGSDSVSNNGHSSSSS 277

Query: 301 GSPCTSPSW 305
           GS CTSPSW
Sbjct: 301 GSACTSPSW 277

[Close]

BLAST of Cucsa.235560 vs. TAIR10
Match: AT3G29300.1 (AT3G29300.1 unknown protein)

HSP 1 Score: 91.7 bits (226), Expect = 8.6e-19
Identity = 71/170 (41.76%), Postives = 87/170 (51.18%), Query Frame = 1


Query: 140 SSLSPRPI--GLISTPSLPS---SPIISASPDVSILKACAQSKLSPAIACNDSSSNGSDH 199
           +S SP P+  G+I TP+       P + AS D           L      NDS     D+
Sbjct: 75  NSSSPNPLYTGVIQTPTKTHYNHEPYLQASLD-----------LIQETIVNDSV----DN 134

Query: 200 FMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERCSSSEEDEIVASLSSTIHSLPNTP 259
           F+YISNP+Y NDA   +    TPFETP SSPSRLE   SS            I    +TP
Sbjct: 135 FIYISNPMYSNDA---TSKPTTPFETPESSPSRLETGESSSSSSGEEDNDHIIEV--STP 194

Query: 260 PLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCTSPSW 305
            LTPMK LP +ACSV+L++  +   S S+SN        SSGSP TSPSW
Sbjct: 195 TLTPMKDLPEKACSVSLKNVET---SASESN--------SSGSPYTSPSW 213

HSP 2 Score: 65.9 bits (159), Expect = 5.1e-11
Identity = 62/199 (31.16%), Postives = 92/199 (46.23%), Query Frame = 1


Query: 9   LGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRV--APPTTTSSNLPGDLVATATN 68
           + ATL+MVVSL +VL L+LVLLAELYCSLLLRRRR      P TTT S        T T 
Sbjct: 1   MAATLVMVVSLVMVLSLVLVLLAELYCSLLLRRRRHNSLNLPITTTVST----AARTTTT 60

Query: 69  ISQSLPSAHRRDNNRSAISLSS---LYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEPEAK 128
           ++Q++ +    + + S I+ SS   LY  GV+  P    +               EP  +
Sbjct: 61  LNQAISTTSNDNTSPSNINSSSPNPLYT-GVIQTPTKTHYN-------------HEPYLQ 120

Query: 129 SQSSQLHRIIDIDTLESSL-SPRPIGLISTPSLPSSPIISASPDVSILKACAQSKLSPAI 188
           +    +   I  D++++ +    P+      S P++P  +     S L+    S  S   
Sbjct: 121 ASLDLIQETIVNDSVDNFIYISNPMYSNDATSKPTTPFETPESSPSRLETGESSSSS--- 174

Query: 189 ACNDSSSNGSDHFMYISNP 202
               S    +DH + +S P
Sbjct: 181 ----SGEEDNDHIIEVSTP 174

[Close]

BLAST of Cucsa.235560 vs. NCBI nr
Match: gi|778660534|ref|XP_011656402.1| (PREDICTED: uncharacterized protein LOC105435738 [Cucumis sativus])

HSP 1 Score: 595.1 bits (1533), Expect = 6.8e-167
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1


Query: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDL 60
           MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDL
Sbjct: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDL 60

Query: 61  VATATNISQSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120
           VATATNISQSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP
Sbjct: 61  VATATNISQSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120

Query: 121 EAKSQSSQLHRIIDIDTLESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKLSP 180
           EAKSQSSQLHRIIDIDTLESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKLSP
Sbjct: 121 EAKSQSSQLHRIIDIDTLESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKLSP 180

Query: 181 AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERCSSSEEDEIV 240
           AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERCSSSEEDEIV
Sbjct: 181 AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERCSSSEEDEIV 240

Query: 241 ASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT 300
           ASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT
Sbjct: 241 ASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT 300

Query: 301 SPSW 305
           SPSW
Sbjct: 301 SPSW 304

[Close]

BLAST of Cucsa.235560 vs. NCBI nr
Match: gi|659126816|ref|XP_008463381.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 572.4 bits (1474), Expect = 4.7e-160
Identity = 295/304 (97.04%), Postives = 298/304 (98.03%), Query Frame = 1


Query: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDL 60
           MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNL GD 
Sbjct: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLSGDP 60

Query: 61  VATATNISQSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120
           VATATNISQSLPSA R DNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP
Sbjct: 61  VATATNISQSLPSAPRGDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120

Query: 121 EAKSQSSQLHRIIDIDTLESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKLSP 180
           EAKSQ+SQLHRIIDIDTLESSLSPR IGLISTPSLPSSPIISASPDVSILKACAQSKLSP
Sbjct: 121 EAKSQNSQLHRIIDIDTLESSLSPRRIGLISTPSLPSSPIISASPDVSILKACAQSKLSP 180

Query: 181 AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERCSSSEEDEIV 240
           AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRG+NTPFETP+SSPSRLERCSSSEEDEIV
Sbjct: 181 AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGDNTPFETPSSSPSRLERCSSSEEDEIV 240

Query: 241 ASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT 300
           AS SSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT
Sbjct: 241 ASPSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT 300

Query: 301 SPSW 305
           SPSW
Sbjct: 301 SPSW 304

[Close]

BLAST of Cucsa.235560 vs. NCBI nr
Match: gi|566214404|ref|XP_006371897.1| (hypothetical protein POPTR_0018s05840g [Populus trichocarpa])

HSP 1 Score: 289.3 bits (739), Expect = 8.0e-75
Identity = 171/308 (55.52%), Postives = 211/308 (68.51%), Query Frame = 1


Query: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDL 60
           M+G+SK+I+GATL MVVSLAIVL L+LVLLAELYCSLLLRRR+LR    TTTS+      
Sbjct: 1   MKGSSKIIMGATLAMVVSLAIVLALVLVLLAELYCSLLLRRRQLRSTSNTTTSAT----- 60

Query: 61  VATATNISQSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120
             T +  + SL  + +  N   ++ LSS YA GVL AP++FLFP V   K+N        
Sbjct: 61  TTTTSTTNTSLSQSPQPQNQPPSLPLSSYYAQGVLRAPKSFLFPAVSPNKENK-----SA 120

Query: 121 EAKSQSSQLHRIIDIDT--LESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKL 180
           E + + SQLHR++++ T  L   LSP+ IGLI+  S PS+  +S+   V       +S  
Sbjct: 121 ETRKEHSQLHRVLEVHTQVLNPGLSPQQIGLINI-SPPSTAFVSSPHQVEENPVQIRS-- 180

Query: 181 SPAIACNDSSSNG-SDHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERC-SSSEE 240
             + ACN     G  +H +YISNPIYDNDA RPS  + TP+ETP+SSPSRLE C SSS E
Sbjct: 181 --SNACNVRECAGCGEHLVYISNPIYDNDASRPSTVD-TPYETPDSSPSRLETCGSSSGE 240

Query: 241 DEIVASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSG 300
           +EI     S  HS+P TPPLTPMKKLPA+ACSV+LRDARSLG SGSDS ++NGLSSSSSG
Sbjct: 241 EEIALPSPSAPHSVPGTPPLTPMKKLPAKACSVSLRDARSLGTSGSDSVSNNGLSSSSSG 292

Query: 301 SPCTSPSW 305
           SPCTSPSW
Sbjct: 301 SPCTSPSW 292

[Close]

BLAST of Cucsa.235560 vs. NCBI nr
Match: gi|743900321|ref|XP_011043456.1| (PREDICTED: uncharacterized protein LOC105138919 [Populus euphratica])

HSP 1 Score: 282.3 bits (721), Expect = 9.8e-73
Identity = 171/300 (57.00%), Postives = 208/300 (69.33%), Query Frame = 1


Query: 9   LGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLPGDLVATATNIS 68
           +GATL MVVSLAIVL L+LVLLAELYCSLLLRRR+LR    TTTS+        T T++S
Sbjct: 1   MGATLAMVVSLAIVLALVLVLLAELYCSLLLRRRQLRSTSNTTTSATST-TTSTTNTSLS 60

Query: 69  QSLPSAHRRDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEPEAKSQSSQ 128
           QS P  H +     ++  SS YA GVL APR+FLFP V    +N +      E + + SQ
Sbjct: 61  QS-PQPHHQP---PSLPPSSYYAQGVLRAPRSFLFPAVSPSTENKL-----AETRKERSQ 120

Query: 129 LHRIIDIDT--LESSLSPRPIGLISTPSLPSSPIISASPDVSILKACAQSKLSPAIACND 188
           LHR+I++ T  L   LSP+ IGLI+  S PS+ ++S+   V  +    +S    + ACND
Sbjct: 121 LHRVIEVHTQELNPGLSPQQIGLINI-SPPSTALVSSPHQVDEIPVQIRS----SNACND 180

Query: 189 SSSNG-SDHFMYISNPIYDNDAIRPSRGENTPFETPNSSPSRLERC-SSSEEDEIVASLS 248
               G  +H +YISNPIYDNDA RPSR + TP+ETP+SSPSRLE C SSS E+EI     
Sbjct: 181 RECAGCGEHLVYISNPIYDNDASRPSRVD-TPYETPDSSPSRLETCGSSSGEEEIALPSP 240

Query: 249 STIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCTSPSW 305
           S  HS+P TPPLTPMKKLPA+ACSV+LRDARSLG SGSDS ++NGLSSSSSGSPCTSPSW
Sbjct: 241 SAPHSVPGTPPLTPMKKLPAKACSVSLRDARSLGTSGSDSVSNNGLSSSSSGSPCTSPSW 284

[Close]

BLAST of Cucsa.235560 vs. NCBI nr
Match: gi|1009160484|ref|XP_015898376.1| (PREDICTED: uncharacterized protein LOC107431868 [Ziziphus jujuba])

HSP 1 Score: 280.4 bits (716), Expect = 3.7e-72
Identity = 173/322 (53.73%), Postives = 212/322 (65.84%), Query Frame = 1


Query: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNL-PGD 60
           M+GTSKVI+GATL+MVVSLA+VLGLILVLLAELYCSLLLRRR LR+   + T+S   P  
Sbjct: 1   MKGTSKVIMGATLVMVVSLAMVLGLILVLLAELYCSLLLRRRELRITTTSNTNSPATPAA 60

Query: 61  LVATATNISQSLPSAHRRDNNRSAIS-LSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVA 120
             AT T ++ S PS   +  ++SA   LSS Y+ GVL APR+FLFP + C +D+      
Sbjct: 61  PSATETALNTSSPSYPTQPQDQSAGQPLSSFYSQGVLRAPRSFLFPAISCKEDS------ 120

Query: 121 EPEAKSQSSQLHRIIDIDTLESSLSPRPIGLISTPSLPSSPIISASPDVS---------- 180
             E K Q  QL ++IDI   E +LSP  IG+ISTPS   S  ++ASP V+          
Sbjct: 121 -VETKKQHCQLDQVIDIPKQEPNLSPCRIGIISTPSPSIS--LAASPQVTGEEKEEADGG 180

Query: 181 ---ILKACAQSKLSPAIACNDSSSNGS---DHFMYISNPIYDNDAIRPSRGENTPFETPN 240
                    ++     I  N+ S  G    +HF+YISNPIYDND  R S G NTPFETP+
Sbjct: 181 SNITRDEKEEAGCGSNIPRNEKSCGGGGVGEHFVYISNPIYDNDGTRFS-GVNTPFETPD 240

Query: 241 SSPSRLERCSSSEEDEIVASLSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGS 300
           SSPSRLE   SS  ++ V+  S +  S   TPPLTPMKKLPAEA S++LR+ARSL  SGS
Sbjct: 241 SSPSRLEMAGSSSGEDEVSQPSPSSPSSILTPPLTPMKKLPAEASSISLRNARSLATSGS 300

Query: 301 DSNTHNGLSSSSSGSPCTSPSW 305
           +SNT+NGLSSSSSGSPCTSPSW
Sbjct: 301 ESNTNNGLSSSSSGSPCTSPSW 312

The following BLAST results are available for this feature:

BLAST of Cucsa.235560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWW9_CUCSA	4.8e-167	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G366990 PE=4 SV=1	[more]
U5FHE2_POPTR	5.6e-75	55.52	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s05840g PE=4 SV=1	[more]
B9RKS5_RICCO	8.3e-71	57.41	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1053120 PE=4 SV=1	[more]
V4UEA5_9ROSI	3.2e-70	55.99	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010509mg PE=4 SV=1	[more]
A0A067E738_CITSI	5.4e-70	55.66	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023809mg PE=4 SV=1	[more]

BLAST of Cucsa.235560 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G29300.1	8.6e-19	41.76	unknown protein	[more]

BLAST of Cucsa.235560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778660534\|ref\|XP_011656402.1\|	6.8e-167	100.00	PREDICTED: uncharacterized protein LOC105435738 [Cucumis sativus]	[more]
gi\|659126816\|ref\|XP_008463381.1\|	4.7e-160	97.04	PREDICTED: putative protein TPRXL [Cucumis melo]	[more]
gi\|566214404\|ref\|XP_006371897.1\|	8.0e-75	55.52	hypothetical protein POPTR_0018s05840g [Populus trichocarpa]	[more]
gi\|743900321\|ref\|XP_011043456.1\|	9.8e-73	57.00	PREDICTED: uncharacterized protein LOC105138919 [Populus euphratica]	[more]
gi\|1009160484\|ref\|XP_015898376.1\|	3.7e-72	53.73	PREDICTED: uncharacterized protein LOC107431868 [Ziziphus jujuba]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.235560.1	Cucsa.235560.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.235560	Cla010628	Watermelon (97103) v1	cgywmB439
Cucsa.235560	Csa1G366990	Cucumber (Chinese Long) v2	cgycuB333
Cucsa.235560	MELO3C025334	Melon (DHL92) v3.5.1	cgymeB396
Cucsa.235560	CSPI01G19230	Wild cucumber (PI 183967)	cgycpiB348
Cucsa.235560	CmaCh10G006070	Cucurbita maxima (Rimu)	cgycmaB0648
Cucsa.235560	CmaCh11G006030	Cucurbita maxima (Rimu)	cgycmaB0649
Cucsa.235560	CmoCh10G006470	Cucurbita moschata (Rifu)	cgycmoB0649
Cucsa.235560	CmoCh11G006070	Cucurbita moschata (Rifu)	cgycmoB0650
Cucsa.235560	Lsi06G008830	Bottle gourd (USVL1VR-Ls)	cgylsiB382
Cucsa.235560	MELO3C025334.2	Melon (DHL92) v3.6.1	cgymedB394
Cucsa.235560	CsaV3_1G030510	Cucumber (Chinese Long) v3	cgycucB353
Cucsa.235560	Cla97C06G118220	Watermelon (97103) v2	cgywmbB413
Cucsa.235560	Bhi02G000934	Wax gourd	cgywgoB465
Cucsa.235560	Carg09861	Silver-seed gourd	carcgyB0157
Cucsa.235560	Carg12189	Silver-seed gourd	carcgyB0042

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.235560	Wild cucumber (PI 183967)	cgycpiB349
Cucsa.235560	Cucurbita pepo (Zucchini)	cgycpeB0618
Cucsa.235560	Cucurbita pepo (Zucchini)	cgycpeB0619