Cucsa.234200 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.234200
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPre-mRNA-splicing factor syf2
Locationscaffold01999 : 160377 .. 163748 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTGGTAGAGAAAAGAGTATAATTATTTATAATTTTGGGAGGGATCTTGTGCAATTCTTCTCCCTTCTTCCCAAAACGCGAAGAGGAATCTATTCCCTTCTTCTCCTTCTTCTTCTTCCTCTTCCTCTTCCTCCTCCTCCTCCTCCTCTTCTACGTGTTCTAACCCAAGCGGAAAAACCTAGGCTTCAGGTACTGTTCTGTAGCTCTCTTTTAGCACCACTCGTTCTTTTATTACTTTTCTCATAGTTTCCTATGCTTGCTTTTCCTTGAATTTCTGTTTTGCATCGCAAGATTTGACTGGAAGTAGCGATTGTTTTCATGCTGCTATTTCTGTTTTTTTTtCTTGCTTGTTCGCTTTCCGGGAATACGAACAATAAAAAGGATTGTTGTTTCCCCCACTTTTTGGGTCTGTTTTTCTGGATGTTTTAGTGGACTCAATCCTGTGTTATGTTGCTGTTCTTCGCTTCTTTTCCCCGGAAGTTGAATTGTTCTAGTTGGTGCAGGAATTTATTTTGGAACATATAAAGGCATATGTAAAAGAATCAATTTTCCATCGAATAATTGCGTTGGTTCGATAAATTCGGTTGATTTAACAAGATTCAGTTGGAAATTTGAATGTTTTTTTTttCTTGTTTGATTGATCATGTAATGCGACCATTGCATTCAATGATGCCCTTTTACGGTTGTTTTGTTTATGGGTTTAAGAGCCCATAATCCTTTTATAAGATTTTTGAGCTCCATTTAATTGTGTCTCTATTTGCAGTGTATTATTGGAGTAAGATAAGTTGTTGCAGAGATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTGAATTGAAAGCCCGGAGTCAGAAAAACGAGCCAGGTTTTGTAGCATACTGCAATGTCTTTGCAGTTACCTTGAGCATCATAACTTTCTCTAATTGTCATCACTGCTTACCCTTTTATCGAATTATTAACGCCCTCTTCGATTTACTTACTTCTTCAAAATTGGCTCTATAAATTGCTTAATCGTCTTTGATTCCCTCCACCCTTCAGTTTTCTGATTATGTCATTAGTTACCTTTTCCTTCTCATTTAATTTTTTCTTGTGAATTGCGATCACAGTTCCCACTTCATCAGAAACTGTACAAGCTGGTCGAAGTAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGATGAAGAAGGGCACAGTGATGGTGATCTTGACAAATTTAGTGGCGAGGAAAATGTGGAAGGAGACTTCACAAAGCTCACGGGGAGGAAGAAGAAATTGTTTGAAATTAGGCTTAAGATGGTAATTTTCTATAATTTTTTtAAAAAaTAACGATCAATTATTATTGAGTAGTCATTGACTTAGGAATGGTGGATGCAGAATGAGGCTCGGAAAGCTAATCAAACAGCAATTGCTGCTGAGAAAAAGAAAaTGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCAGAAAACAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGGTGAGTCTCTATTCTTTTGTGCACATGGGCTCTTTTGAATACATGCAACTGCACCTATAATTCCCTTTGACATAAAATTATACTATGCTGATTTTAGCTTTGTGTGTATAGACAGATGCATCTTTTAGTAATTTGATAAGGAACCCTATTATACTGGTTGATGATGGAAACATGATCTGATTCTAGGATATAGATATTATGTGGTGAGATGTCTAGGATACGTATGCATACTCCTGCACTAATTGGTGTGAACTCTTGCCATTGCTGATATCTTCTTTCTTATTCATGTAGTATGGTTTTTCATAGCTATAGTCCTCCATGTTTCTCTCTGGTACAGAGCCAATTAAATTGATGGTTTAATTTTGATTTGTATCATATTCCAATGTAATTACTTTTCTTTAGGGATGGGGGATGGCTTGGGTATAAAGTTTACTTAACTGGTTGTATTTGACCTATTTCTTGCACTATGTTAACACTTGTATTACAAAAAGGTTAAACTACGTTTGTTTTGACAGTCTTTAACCAGAAAACGTTGTATAATGCATACAAAAAGAGGACGAAGAATGTAAATATTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAGTATGGAAAGGTAATATTAGTTCCACTGTATAATTTCCAGTCTCGACCGTAGATGCAATTACTAGATTTCTTAGGATGTAGCTTTCCCCTCTACACTGCAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAAGACCGAGATGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCCTTACCTGATTAAGGTATTGTTTAGAAGTGGCTCTGGTTCATAAGTCAAGTTAGTTCCTTCATGCAACTTTTTCTCTCTCCATATGCTTGATGCATGTTTTCCTCCTTTTATTGTTTTTtACTCCCTGCTAAGGAAGACGTTCTTCTACGTACGTGCAACCTAAATGCACCCATATTCATGTATCTCTTTCAATCTCAAAGTGAAAAAGTACTTTTAAAAAaGAAATTTTTGTGATGTGGCAACTTGGAATTAGGCACTTGGGTGGGTGGGCTGCGAAAAGATGGTGCAACCAAGTGTTTTACTCCTTTTtACCCTTGCTCCCCTTTCTCTGTTGTAACAAAGTGTATCTGTTTGGCTGAAATTATGTTTTTTTTTtAATTtCTAACCATGGTTTCCTTTGCTTGATTGAATTTTATATTCTTTTtCGTTTTGTGTAGGATTTTCAAGGAAGATCGGAATTCTAGTAGTTGGGAGTATCTAAAGCCTTTCTTCTTTAGTTTCGAAAAGAAGTTATTTCTGTAAAAGATTTCTGGCAAAGCTACATAATTCTCCTTTTAAGTGAAGAGAAAATTGTAAGGTCACATGTCTTAGATTGCAATGTACCATGTAGCAATATATTTGACAATAGCAACTTACTTTGATTGTGTTTCTTTCATTGTGAATACCTTTGTTTCAACAAGTACGAATTAACCCAAACAAAGGATATCATTTTTTC

mRNA sequence

AGTGGTAGAGAAAAGAGTATAATTATTTATAATTTTGGGAGGGATCTTGTGCAATTCTTCTCCCTTCTTCCCAAAACGCGAAGAGGAATCTATTCCcttcttctccttcttcttcttcctcttcctcttcctcctcctcctcctcctcttctACGTGTTCTAACCCAAGCGGAAAAACCTAGGCTTCAGTGTATTATTGGAGTAAGATAAGTTGTTGCAGAGATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTGAATTGAAAGCCCGGAGTCAGAAAAACGAGCCAGTTCCCACTTCATCAGAAACTGTACAAGCTGGTCGAAGTAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGATGAAGAAGGGCACAGTGATGGTGATCTTGACAAATTTAGTGGCGAGGAAAATGTGGAAGGAGACTTCACAAAGCTCACGGGGAGGAAGAAGAAATTGTTTGAAATTAGGCTTAAGATGAATGAGGCTCGGAAAGCTAATCAAACAGCAATTGCTGCTGAGAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCAGAAAACAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACGTTGTATAATGCATACAAAAAGAGGACGAAGAATGTAAATATTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAGTATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAAGACCGAGATGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCCTTACCTGATTAAGGTATTGTTTAGAAGTGGCTCTGGTTCATAAGTCAAGATTTTCAAGGAAGATCGGAATTCTAGTAGTTGGGAGTATCTAAAGCCTTTCTTCTTTAGTTTCGAAAAGAAGTTATTTCTGTAAAAGATTTCTGGCAAAGCTACATAATTCTCCTTTTAAGTGAAGAGAAAATTGTAAGGTCACATGTCTTAGATTGCAATGTACCATGTAGCAATATATTTGACAATAGCAACTTACTTTGATTGTGTTTCTTTCATTGTGAATACCTTTGTTTCAACAAGTACGAATTAACCCAAACAAAGGATATCATTTTTTC

Coding sequence (CDS)

ATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTGAATTGAAAGCCCGGAGTCAGAAAAACGAGCCAGTTCCCACTTCATCAGAAACTGTACAAGCTGGTCGAAGTAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGATGAAGAAGGGCACAGTGATGGTGATCTTGACAAATTTAGTGGCGAGGAAAATGTGGAAGGAGACTTCACAAAGCTCACGGGGAGGAAGAAGAAATTGTTTGAAATTAGGCTTAAGATGAATGAGGCTCGGAAAGCTAATCAAACAGCAATTGCTGCTGAGAAAAAGAAAaTGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCAGAAAACAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACGTTGTATAATGCATACAAAAAGAGGACGAAGAATGTAAATATTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAGTATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAAGACCGAGATGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCCTTACCTGATTAA

Protein sequence

MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD*
Homology
[Close]
BLAST of Cucsa.234200 vs. Swiss-Prot
Match: SYF2_XENLA (Pre-mRNA-splicing factor syf2 OS=Xenopus laevis GN=syf2 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.3e-31
Identity = 85/218 (38.99%), Postives = 124/218 (56.88%), Query Frame = 1 

Query: 99  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGK 158
           K   R +K  E+ LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +
Sbjct: 26  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKNEEKK--R 85

Query: 159 LLDANGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNID 218
              ANG+D  +A +L+ + E AE   +K ++     G+  +    L   Y++ TK +  D
Sbjct: 86  ECAANGVDFERAKLLEISAEDAERWERKKKRKNPDLGFSDYAAAQL-RQYQRLTKQIKPD 145

Query: 219 LEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHED 278
           +EEY   KE   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++D
Sbjct: 146 MEEYEMEKEKQGELFYPTSDSLYHGTHVPSQSGIDRMVTDLEKQIEKREKYSRRRAYNDD 205

Query: 279 KDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
            DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 206 ADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 240

[Close]
BLAST of Cucsa.234200 vs. Swiss-Prot
Match: SYF2_XENTR (Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis GN=syf2 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.6e-31
Identity = 84/218 (38.53%), Postives = 124/218 (56.88%), Query Frame = 1 

Query: 99  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGK 158
           K   R +K  E+ LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +
Sbjct: 35  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKEEEKK--R 94

Query: 159 LLDANGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNID 218
              ANG+D  +A +L+ + E AE   +K ++     G+  +    L   Y++ TK +  D
Sbjct: 95  ECAANGVDYERAKLLEISAEDAERWERKKKRKNPDLGFSDYAAAQL-RQYQRLTKQIKPD 154

Query: 219 LEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHED 278
           +EEY   K+   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++D
Sbjct: 155 MEEYEMEKQKQGEMFYPTSESLYHGTHIPSQSGIDRMVTDLEKQIEKREKYSRRRAYNDD 214

Query: 279 KDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
            DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 215 ADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]
BLAST of Cucsa.234200 vs. Swiss-Prot
Match: SYF2_DANRE (Pre-mRNA-splicing factor syf2 OS=Danio rerio GN=syf2 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.0e-29
Identity = 81/215 (37.67%), Postives = 123/215 (57.21%), Query Frame = 1 

Query: 103 RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSE---SRGISKQKWLEDRKKKIGKLLD 162
           R +K  E+  K NEARK N   +  E K+++ PS     +   + + L D+KKK      
Sbjct: 28  RLRKFRELHFKRNEARKLNHQEVVEEDKRLKLPSNWEAKKARLEYELLVDQKKK-ECAER 87

Query: 163 ANGLDMTKAYMLDTQEAAENKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEY 222
               D  K   +  ++A   + KK +++P P G+  + +  L   Y++ TK +  D+E Y
Sbjct: 88  GEDYDRVKLLEISAEDAERWERKKKKRNPDP-GFSGYAEAQL-RQYQRLTKQIKPDMENY 147

Query: 223 NKMKES-DPEFYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDI 282
            K KE    +F+  ++SL YG     S+D I+ MV +++ + EKR  +SRRR +++D DI
Sbjct: 148 EKQKEECGEDFHPTSNSLIYGTHVP-SKDSINRMVDDVEKQIEKRAKYSRRRAYNDDADI 207

Query: 283 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 208 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 238

[Close]
BLAST of Cucsa.234200 vs. Swiss-Prot
Match: SYF2_RAT (Pre-mRNA-splicing factor SYF2 OS=Rattus norvegicus GN=Syf2 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.0e-29
Identity = 83/215 (38.60%), Postives = 125/215 (58.14%), Query Frame = 1 

Query: 103 RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 162
           R +K  E+ LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 163 NGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEY 222
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQL-RQYHRLTKQIKPDMESY 151

Query: 223 NKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDI 282
            + +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 283 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]
BLAST of Cucsa.234200 vs. Swiss-Prot
Match: SYF2_MOUSE (Pre-mRNA-splicing factor SYF2 OS=Mus musculus GN=Syf2 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.0e-29
Identity = 83/215 (38.60%), Postives = 125/215 (58.14%), Query Frame = 1 

Query: 103 RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 162
           R +K  E+ LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 163 NGLDMTKAYMLD-TQEAAENKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEY 222
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQL-RQYHRLTKQIKPDMESY 151

Query: 223 NKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDI 282
            + +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 283 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]
BLAST of Cucsa.234200 vs. TrEMBL
Match: A0A0A0LJ81_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270830 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 1.9e-182
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of Cucsa.234200 vs. TrEMBL
Match: M5VKL0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009052mg PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 2.5e-139
Identity = 247/315 (78.41%), Postives = 273/315 (86.67%), Query Frame = 1 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCF VIAE KAR  +N+     SE VQA   SG S+ 
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFTVIAEAKARMDQNQ-----SEDVQASGGSGKSNS 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
              ++ E +H+EKPD E H+D   D    EEN+EGDFTK TGRKKKL+E+R+KMN+ARK 
Sbjct: 61  EAAEQEEYVHNEKPDSEEHADDGDDH--PEENMEGDFTKFTGRKKKLWELRMKMNKARKD 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180
           NQT I AEKK++EPP ESRGISKQKWLE+RKK+IGKLLDAN LDM  AYMLDTQE AE K
Sbjct: 121 NQTDITAEKKRLEPPQESRGISKQKWLEERKKRIGKLLDANNLDMKSAYMLDTQEMAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAP GWDVFNQKTLY+AYKKRTKN+ IDLEEYN+MKE+DPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPAGWDVFNQKTLYDAYKKRTKNIEIDLEEYNRMKEADPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKID MVKELKDR+EK+KSFSRRR+FH++KDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDKMVKELKDREEKKKSFSRRRRFHDEKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 308

[Close]
BLAST of Cucsa.234200 vs. TrEMBL
Match: A0A067FL15_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021740mg PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 9.7e-139
Identity = 247/313 (78.91%), Postives = 272/313 (86.90%), Query Frame = 1 

Query: 3   DEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVP 62
           +E RVHPDC NASNPYHEC +YCF+ IAE K R  ++E      E VQA  SSG S+ + 
Sbjct: 2   EERRVHPDCINASNPYHECVDYCFRKIAEAKVRMVEDE-----REAVQASGSSGQSNTLA 61

Query: 63  PDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKANQ 122
            D  EDLH E P  E  SD D DK   EE+VEGDFTKLTGR+KKLFE+RLKMNEARKANQ
Sbjct: 62  SDVAEDLHHENPKLEAGSDSDNDK-PAEEDVEGDFTKLTGRQKKLFELRLKMNEARKANQ 121

Query: 123 TAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYK 182
           TA+ AEKK+MEPP ESRGISKQKWLE+RK+KIGKLLDANGLDMTKA+MLDTQEAAE KYK
Sbjct: 122 TAMVAEKKRMEPPQESRGISKQKWLEERKRKIGKLLDANGLDMTKAFMLDTQEAAEAKYK 181

Query: 183 KWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAP 242
           KWEKDPAP+GWDVFNQK LY+AYKKRTKNV +DLEEYNKMKE+DPEFYR+ASSLQYGK+P
Sbjct: 182 KWEKDPAPFGWDVFNQKALYDAYKKRTKNVEVDLEEYNKMKEADPEFYRDASSLQYGKSP 241

Query: 243 KISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLE 302
           KISEDKID MVKELKDR+EKR SFSRRR+FHE+KDIDSINDRNEHFNKKIERAFG+YTLE
Sbjct: 242 KISEDKIDRMVKELKDREEKRNSFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTLE 301

Query: 303 IKNNLERGTALPD 316
           IKNNLERGTALPD
Sbjct: 302 IKNNLERGTALPD 308

[Close]
BLAST of Cucsa.234200 vs. TrEMBL
Match: V4S615_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028903mg PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.3e-138
Identity = 247/313 (78.91%), Postives = 272/313 (86.90%), Query Frame = 1 

Query: 3   DEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVP 62
           +E RVHPDC NASNPYHEC +YCF+ IAE K R  ++E      E VQA  SSG S+ + 
Sbjct: 2   EERRVHPDCINASNPYHECVDYCFRKIAEAKVRMFEDE-----REAVQASGSSGQSNTLA 61

Query: 63  PDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKANQ 122
            D  EDLH E P  E  SD D DK   EE+VEGDFTKLTGR+KKLFE+RLKMNEARKANQ
Sbjct: 62  SDVAEDLHHENPKLEAGSDSDNDK-PAEEDVEGDFTKLTGRQKKLFELRLKMNEARKANQ 121

Query: 123 TAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYK 182
           TA+ AEKK+MEPP ESRGISKQKWLE+RK+KIGKLLDANGLDMTKA+MLDTQEAAE KYK
Sbjct: 122 TAMVAEKKRMEPPQESRGISKQKWLEERKRKIGKLLDANGLDMTKAFMLDTQEAAEAKYK 181

Query: 183 KWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAP 242
           KWEKDPAP+GWDVFNQK LY+AYKKRTKNV +DLEEYNKMKE+DPEFYR+ASSLQYGK+P
Sbjct: 182 KWEKDPAPFGWDVFNQKALYDAYKKRTKNVEVDLEEYNKMKEADPEFYRDASSLQYGKSP 241

Query: 243 KISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLE 302
           KISEDKID MVKELKDR+EKR SFSRRR+FHE+KDIDSINDRNEHFNKKIERAFG+YTLE
Sbjct: 242 KISEDKIDRMVKELKDREEKRNSFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTLE 301

Query: 303 IKNNLERGTALPD 316
           IKNNLERGTALPD
Sbjct: 302 IKNNLERGTALPD 308

[Close]
BLAST of Cucsa.234200 vs. TrEMBL
Match: M5VXJ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009052mg PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 3.7e-138
Identity = 245/315 (77.78%), Postives = 271/315 (86.03%), Query Frame = 1 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCF VIAE KAR  +N+        VQA   SG S+ 
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFTVIAEAKARMDQNQ------SDVQASGGSGKSNS 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
              ++ E +H+EKPD E H+D   D    EEN+EGDFTK TGRKKKL+E+R+KMN+ARK 
Sbjct: 61  EAAEQEEYVHNEKPDSEEHADDGDDH--PEENMEGDFTKFTGRKKKLWELRMKMNKARKD 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180
           NQT I AEKK++EPP ESRGISKQKWLE+RKK+IGKLLDAN LDM  AYMLDTQE AE K
Sbjct: 121 NQTDITAEKKRLEPPQESRGISKQKWLEERKKRIGKLLDANNLDMKSAYMLDTQEMAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAP GWDVFNQKTLY+AYKKRTKN+ IDLEEYN+MKE+DPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPAGWDVFNQKTLYDAYKKRTKNIEIDLEEYNRMKEADPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKID MVKELKDR+EK+KSFSRRR+FH++KDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDKMVKELKDREEKKKSFSRRRRFHDEKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 307

[Close]
BLAST of Cucsa.234200 vs. TAIR10
Match: AT2G16860.1 (AT2G16860.1 GCIP-interacting family protein)

HSP 1 Score: 439.5 bits (1129), Expect = 1.7e-123
Identity = 219/315 (69.52%), Postives = 256/315 (81.27%), Query Frame = 1 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           M  E RVHPDC NASNPYHEC EYCFK IAE KAR +K              +++G +  
Sbjct: 1   MVSERRVHPDCINASNPYHECVEYCFKKIAEAKARFEK--------------QNTGLAK- 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           V     E L D++ +E+   + + ++ + E  V  D T+LTGR+KKLFE+RLKMNEARK+
Sbjct: 61  VHEQTREPLDDKRIEEDSSEEEEEEEDNQEPQV--DVTQLTGRQKKLFELRLKMNEARKS 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180
           NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAE+K
Sbjct: 121 NQTDVGSEKKKMEAPTETKGISKQKWLEGRKKKIGKLLDANGLDMTQAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEK+P P GWDVFNQKTLYNAYKKRTKN+ +DLEEYN+M+ +DPEFYREASSLQYGK
Sbjct: 181 YKKWEKEPTPAGWDVFNQKTLYNAYKKRTKNIQVDLEEYNRMRAADPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APK S+DKID M KEL DR++KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+YT
Sbjct: 241 APKTSQDKIDKMAKELLDREQKRQEFSRRRKFREEKDIDSINDRNEHFNKKIERAFGKYT 298

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 298

[Close]
BLAST of Cucsa.234200 vs. NCBI nr
Match: gi|778669761|ref|XP_011649295.1| (PREDICTED: pre-mRNA-splicing factor syf2 [Cucumis sativus])

HSP 1 Score: 646.4 bits (1666), Expect = 2.7e-182
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of Cucsa.234200 vs. NCBI nr
Match: gi|659115727|ref|XP_008457705.1| (PREDICTED: pre-mRNA-splicing factor syf2 [Cucumis melo])

HSP 1 Score: 635.2 bits (1637), Expect = 6.2e-179
Identity = 309/315 (98.10%), Postives = 313/315 (99.37%), Query Frame = 1 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEE VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]
BLAST of Cucsa.234200 vs. NCBI nr
Match: gi|595793463|ref|XP_007200480.1| (hypothetical protein PRUPE_ppa009052mg [Prunus persica])

HSP 1 Score: 503.1 bits (1294), Expect = 3.7e-139
Identity = 247/315 (78.41%), Postives = 273/315 (86.67%), Query Frame = 1 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCF VIAE KAR  +N+     SE VQA   SG S+ 
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFTVIAEAKARMDQNQ-----SEDVQASGGSGKSNS 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
              ++ E +H+EKPD E H+D   D    EEN+EGDFTK TGRKKKL+E+R+KMN+ARK 
Sbjct: 61  EAAEQEEYVHNEKPDSEEHADDGDDH--PEENMEGDFTKFTGRKKKLWELRMKMNKARKD 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180
           NQT I AEKK++EPP ESRGISKQKWLE+RKK+IGKLLDAN LDM  AYMLDTQE AE K
Sbjct: 121 NQTDITAEKKRLEPPQESRGISKQKWLEERKKRIGKLLDANNLDMKSAYMLDTQEMAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAP GWDVFNQKTLY+AYKKRTKN+ IDLEEYN+MKE+DPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPAGWDVFNQKTLYDAYKKRTKNIEIDLEEYNRMKEADPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKID MVKELKDR+EK+KSFSRRR+FH++KDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDKMVKELKDREEKKKSFSRRRRFHDEKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 308

[Close]
BLAST of Cucsa.234200 vs. NCBI nr
Match: gi|568866771|ref|XP_006486722.1| (PREDICTED: pre-mRNA-splicing factor syf2 [Citrus sinensis])

HSP 1 Score: 502.3 bits (1292), Expect = 6.2e-139
Identity = 248/313 (79.23%), Postives = 272/313 (86.90%), Query Frame = 1 

Query: 3   DEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSFVP 62
           +E RVHPDC NASNPYHEC +YCF+ IAE K R  ++E      E VQA  SSG S+ + 
Sbjct: 2   EERRVHPDCINASNPYHECVDYCFRKIAEAKVRMVEDE-----REAVQASGSSGQSNTLA 61

Query: 63  PDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKANQ 122
            D  EDLHDE P  E  SD D DK   EE+VEGDFTKLTGR+KKLFE+RLKMNEARKANQ
Sbjct: 62  SDVAEDLHDENPKLEAGSDSDNDK-PAEEDVEGDFTKLTGRQKKLFELRLKMNEARKANQ 121

Query: 123 TAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYK 182
           TA+ AEKK+MEPP ESRGISKQKWLE+RK+KIGKLLDANGLDMTKA+MLDTQEAAE KYK
Sbjct: 122 TAMVAEKKRMEPPQESRGISKQKWLEERKRKIGKLLDANGLDMTKAFMLDTQEAAEAKYK 181

Query: 183 KWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAP 242
           KWEKDPAP GWDVFNQK LY+AYKKRTKNV +DLEEYNKMKE+DPEFYR+ASSLQYGK+P
Sbjct: 182 KWEKDPAPVGWDVFNQKALYDAYKKRTKNVEVDLEEYNKMKEADPEFYRDASSLQYGKSP 241

Query: 243 KISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLE 302
           KISEDKID MVKELKDR+EKR SFSRRR+FHE+KDIDSINDRNEHFNKKIERAFG+YTLE
Sbjct: 242 KISEDKIDRMVKELKDREEKRNSFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTLE 301

Query: 303 IKNNLERGTALPD 316
           IKNNLERGTALPD
Sbjct: 302 IKNNLERGTALPD 308

[Close]
BLAST of Cucsa.234200 vs. NCBI nr
Match: gi|764535191|ref|XP_011458676.1| (PREDICTED: pre-mRNA-splicing factor syf2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 501.5 bits (1290), Expect = 1.1e-138
Identity = 244/315 (77.46%), Postives = 269/315 (85.40%), Query Frame = 1 

Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIAE KAR  +++     SE+VQ    SG S  
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAETKARMDQSQ-----SESVQVSGGSGKSKV 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
               + EDL      +E   DGD      EEN+EGDFTK TGRKK+L+E+R+KMN+ARKA
Sbjct: 61  EAAQQVEDLDRPSETDEHAGDGDEFPVEEEENMEGDFTKFTGRKKRLWELRMKMNKARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180
           NQT IAAEKK+MEPP ESRGISKQKWLE+RKK+IGKLLDANGLDM  AYMLDTQE AE K
Sbjct: 121 NQTDIAAEKKRMEPPQESRGISKQKWLEERKKRIGKLLDANGLDMKSAYMLDTQEMAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKN+ +DLEEYNKMKE DPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNIEVDLEEYNKMKEEDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKID MVKELKD++EK+K FSRRR+FH++KDIDSINDRNEHFNKKIERAFG+YT
Sbjct: 241 APKISEDKIDKMVKELKDQEEKKKKFSRRRRFHDEKDIDSINDRNEHFNKKIERAFGKYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 310

The following BLAST results are available for this feature:
BLAST of Cucsa.234200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SYF2_XENLA3.3e-3138.99Pre-mRNA-splicing factor syf2 OS=Xenopus laevis GN=syf2 PE=2 SV=1[more]
SYF2_XENTR9.6e-3138.53Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis GN=syf2 PE=2 SV=1[more]
SYF2_DANRE9.0e-2937.67Pre-mRNA-splicing factor syf2 OS=Danio rerio GN=syf2 PE=2 SV=1[more]
SYF2_RAT9.0e-2938.60Pre-mRNA-splicing factor SYF2 OS=Rattus norvegicus GN=Syf2 PE=2 SV=1[more]
SYF2_MOUSE9.0e-2938.60Pre-mRNA-splicing factor SYF2 OS=Mus musculus GN=Syf2 PE=2 SV=1[more]
BLAST of Cucsa.234200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJ81_CUCSA1.9e-182100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270830 PE=4 SV=1[more]
M5VKL0_PRUPE2.5e-13978.41Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009052mg PE=4 SV=1[more]
A0A067FL15_CITSI9.7e-13978.91Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021740mg PE=4 SV=1[more]
V4S615_9ROSI1.3e-13878.91Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028903mg PE=4 SV=1[more]
M5VXJ8_PRUPE3.7e-13877.78Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009052mg PE=4 SV=1[more]
BLAST of Cucsa.234200 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G16860.11.7e-12369.52 GCIP-interacting family protein[more]
BLAST of Cucsa.234200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778669761|ref|XP_011649295.1|2.7e-182100.00PREDICTED: pre-mRNA-splicing factor syf2 [Cucumis sativus][more]
gi|659115727|ref|XP_008457705.1|6.2e-17998.10PREDICTED: pre-mRNA-splicing factor syf2 [Cucumis melo][more]
gi|595793463|ref|XP_007200480.1|3.7e-13978.41hypothetical protein PRUPE_ppa009052mg [Prunus persica][more]
gi|568866771|ref|XP_006486722.1|6.2e-13979.23PREDICTED: pre-mRNA-splicing factor syf2 [Citrus sinensis][more]
gi|764535191|ref|XP_011458676.1|1.1e-13877.46PREDICTED: pre-mRNA-splicing factor syf2 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013260mRNA_splic_SYF2
IPR013260mRNA_splic_SYF2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.234200.1Cucsa.234200.1mRNA
Cucsa.234200.2Cucsa.234200.2mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013260mRNA splicing factor SYF2PANTHERPTHR13264GCIP-INTERACTING PROTEIN P29coord: 1..313
score: 3.6E
IPR013260mRNA splicing factor SYF2PFAMPF08231SYF2coord: 161..308
score: 2.2
NoneNo IPR availablePANTHERPTHR13264:SF5PRE-MRNA-SPLICING FACTOR SYF2coord: 1..313
score: 3.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.234200Cla020271Watermelon (97103) v1cgywmB437
Cucsa.234200Csa2G270830Cucumber (Chinese Long) v2cgycuB330
Cucsa.234200MELO3C020824Melon (DHL92) v3.5.1cgymeB393
Cucsa.234200CSPI02G13630Wild cucumber (PI 183967)cgycpiB345
Cucsa.234200CmaCh02G002650Cucurbita maxima (Rimu)cgycmaB0647
Cucsa.234200CmoCh02G002610Cucurbita moschata (Rifu)cgycmoB0648
Cucsa.234200Cp4.1LG05g13620Cucurbita pepo (Zucchini)cgycpeB0617
Cucsa.234200MELO3C020824.2Melon (DHL92) v3.6.1cgymedB392
Cucsa.234200CsaV3_2G016150Cucumber (Chinese Long) v3cgycucB351
Cucsa.234200Bhi10G001450Wax gourdcgywgoB463
Cucsa.234200Carg05182Silver-seed gourdcarcgyB0922
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.234200Melon (DHL92) v3.6.1cgymedB393
Cucsa.234200Silver-seed gourdcarcgyB0369
Cucsa.234200Silver-seed gourdcarcgyB0410
Cucsa.234200Silver-seed gourdcarcgyB1135
Cucsa.234200Cucumber (Chinese Long) v3cgycucB352
Cucsa.234200Watermelon (97103) v2cgywmbB410
Cucsa.234200Watermelon (97103) v2cgywmbB411
Cucsa.234200Wax gourdcgywgoB462
Cucsa.234200Cucumber (Gy14) v1cgycgyB121
Cucsa.234200Cucurbita maxima (Rimu)cgycmaB0644
Cucsa.234200Cucurbita maxima (Rimu)cgycmaB0645
Cucsa.234200Cucurbita maxima (Rimu)cgycmaB0646
Cucsa.234200Cucurbita moschata (Rifu)cgycmoB0645
Cucsa.234200Cucurbita moschata (Rifu)cgycmoB0646
Cucsa.234200Cucurbita moschata (Rifu)cgycmoB0647
Cucsa.234200Wild cucumber (PI 183967)cgycpiB346
Cucsa.234200Cucumber (Chinese Long) v2cgycuB331
Cucsa.234200Melon (DHL92) v3.5.1cgymeB394
Cucsa.234200Watermelon (Charleston Gray)cgywcgB408
Cucsa.234200Watermelon (Charleston Gray)cgywcgB409
Cucsa.234200Watermelon (97103) v1cgywmB436
Cucsa.234200Cucurbita pepo (Zucchini)cgycpeB0615
Cucsa.234200Cucurbita pepo (Zucchini)cgycpeB0616
Cucsa.234200Bottle gourd (USVL1VR-Ls)cgylsiB380
Cucsa.234200Bottle gourd (USVL1VR-Ls)cgylsiB381