Cucsa.231850 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.231850
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionThioredoxin
Locationscaffold01989 : 50815 .. 51797 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGAAGAAGGTCAAGTTATTGCATGCCATAAGCAATCTGAATGGGAAGCTCTATTGGCTAAAGCTAAGGAATCTGGAAAATTGGTATAATTTCTTTTGATCTTTCACTTCATTTTCTACATTATCGTCTCAATTGATTCCCGTAGAATTTTCGAATTTTACGTCCTGTTCTTCCTTTTTCCTCTTAGGTGATTGTTTTCATTGTCTTGGTATATAAGTCGTGATGGATTCGCTAGGaTTTCTGATCTCTTATGCTAGTTTATATATTCGATTTATCTAGATTGAATGGTCTTGTGTTGAAATTGATGAGTCTTTTGATCGATTTGTATTCCTTATGATTTCTCAATCCTTCTCTGTTACGCTTTTTGTTAATTAACTCGAACCTTGATTGTGCTATTTTGCGTTAAGCGAACTCTCAGTGATTCTGTATTACTGTTTCTGTTCATTTCTTTGTTCTTgATGTTTCTAGAGTTTTTTCTTGATAGGTTGTGGTGGATTTTACTGCTTCCTGGTGCGGCCCATGCCGTACAATTGCTCCATATTTCTCCGAATTGGCTAAGAATCATTCCGGTGTTATGTTCATTAAAGTGGACGTCGATGAATTGAATGTAACATATTTAACCTTTTTGATTATATCAAAATTTCAATCGTTCTCGTACAAGATAATGTTGCAGTAGTCTCAAGAGAGATTCGTGTTTTCTTTTtGTTTTGATTCCTCTTTTCCTTCCCTAAACAATGGATTCTGTTTCTCTCTGTAGGCTATCGCTAGCGAGTGGAAGATTACTGCAATGCCGACGTTTGTCTTCGTGAAAGGAGGAGAAACAGTTCACAAGATTGTTGGTGCTGATAGAGCGGCACTGTTGAAGAAAATAGAAGAGCTTAAAACTTCAACAACAGCTGCTGCTACTTCTACTGCTTAGAGGAACGTACCCTTATTCTTATTATTATCAGTATGGTGTAATGTTGATTCTGGTTTCTAG

mRNA sequence

ATGGGTGAAGAAGGTCAAGTTATTGCATGCCATAAGCAATCTGAATGGGAAGCTCTATTGGCTAAAGCTAAGGAATCTGGAAAATTGGTTGTGGTGGATTTTACTGCTTCCTGGTGCGGCCCATGCCGTACAATTGCTCCATATTTCTCCGAATTGGCTAAGAATCATTCCGGTGTTATGTTCATTAAAGTGGACGTCGATGAATTGAATGCTATCGCTAGCGAGTGGAAGATTACTGCAATGCCGACGTTTGTCTTCGTGAAAGGAGGAGAAACAGTTCACAAGATTGTTGGTGCTGATAGAGCGGCACTGTTGAAGAAAATAGAAGAGCTTAAAACTTCAACAACAGCTGCTGCTACTTCTACTGCTTAGAGGAACGTACCCTTATTCTTATTATTATCAGTATGGTGTAATGTTGATTCTGGTTTCTAG

Coding sequence (CDS)

ATGGGTGAAGAAGGTCAAGTTATTGCATGCCATAAGCAATCTGAATGGGAAGCTCTATTGGCTAAAGCTAAGGAATCTGGAAAATTGGTTGTGGTGGATTTTACTGCTTCCTGGTGCGGCCCATGCCGTACAATTGCTCCATATTTCTCCGAATTGGCTAAGAATCATTCCGGTGTTATGTTCATTAAAGTGGACGTCGATGAATTGAATGCTATCGCTAGCGAGTGGAAGATTACTGCAATGCCGACGTTTGTCTTCGTGAAAGGAGGAGAAACAGTTCACAAGATTGTTGGTGCTGATAGAGCGGCACTGTTGAAGAAAATAGAAGAGCTTAAAACTTCAACAACAGCTGCTGCTACTTCTACTGCTTAG

Protein sequence

MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVMFIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAATSTA*
Homology
[Close]
BLAST of Cucsa.231850 vs. Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.3e-31
Identity = 65/108 (60.19%), Postives = 77/108 (71.30%), Query Frame = 1 

Query: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60
           M EE QVIACH   EW     KAK+SGKL+V+DFTASWCGPCR I PY SELAK    V 
Sbjct: 1   MAEEAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVA 60

Query: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKI 109
           F KVDVD+L  +A E+K+ AMP+FV +K G+ V +IVGA +  LL KI
Sbjct: 61  FFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKI 108

[Close]
BLAST of Cucsa.231850 vs. Swiss-Prot
Match: TRXH3_ARATH (Thioredoxin H3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-31
Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 1 

Query: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60
           M  EG+VIACH   +W   L  A ES KL+V+DFTA+WC PCR IAP F++LAK H  V+
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAA 119
           F KVDVDELN +A E+K+ AMPTF+F+K GE    +VGA +  ++  +E+ KT   AA
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAAA 118

[Close]
BLAST of Cucsa.231850 vs. Swiss-Prot
Match: TRXH1_ORYSJ (Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30
Identity = 62/119 (52.10%), Postives = 86/119 (72.27%), Query Frame = 1 

Query: 3   EEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVMFI 62
           EEG VIACH + E++A + KAKE+GK+V++DFTASWCGPCR IAP F+E AK   G +F+
Sbjct: 4   EEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFL 63

Query: 63  KVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAATS 122
           KVDVDEL  +A ++ + AMPTF+F+K G    K+VGA +  L   I +   +T A+A++
Sbjct: 64  KVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASASA 122

[Close]
BLAST of Cucsa.231850 vs. Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30
Identity = 62/119 (52.10%), Postives = 86/119 (72.27%), Query Frame = 1 

Query: 3   EEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVMFI 62
           EEG VIACH + E++A + KAKE+GK+V++DFTASWCGPCR IAP F+E AK   G +F+
Sbjct: 4   EEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFL 63

Query: 63  KVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAATS 122
           KVDVDEL  +A ++ + AMPTF+F+K G    K+VGA +  L   I +   +T A+A++
Sbjct: 64  KVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASASA 122

[Close]
BLAST of Cucsa.231850 vs. Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-30
Identity = 67/116 (57.76%), Postives = 81/116 (69.83%), Query Frame = 1 

Query: 3   EEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNH-SGVMF 62
           EEGQVI CH    W   L KAKES KL+V+DFTASWC PCR IAP F++LAK   S  +F
Sbjct: 4   EEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIF 63

Query: 63  IKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTA 118
            KVDVDEL ++A E+ + AMPTFVF+K GE V K+VGA++  L  KI +    TTA
Sbjct: 64  FKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGVTTA 119

[Close]
BLAST of Cucsa.231850 vs. TrEMBL
Match: A0A0A0LRK2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G362490 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 9.9e-63
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1 

Query: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60
           MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM
Sbjct: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60

Query: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAAT 120
           FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAAT
Sbjct: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAAT 120

Query: 121 STA 124
           STA
Sbjct: 121 STA 123

[Close]
BLAST of Cucsa.231850 vs. TrEMBL
Match: K7NBX3_SIRGR (Thioredoxin H OS=Siraitia grosvenorii PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.7e-41
Identity = 84/123 (68.29%), Postives = 99/123 (80.49%), Query Frame = 1 

Query: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60
           M EEGQVI CHK +EW+  + K KESGKL+VVDFTASWCGPCR IAP F+ELAKN+  V+
Sbjct: 1   MAEEGQVIPCHKVAEWKEQIEKGKESGKLIVVDFTASWCGPCRAIAPLFTELAKNNPNVI 60

Query: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAAT 120
           F+KVDVDELN +ASEW+I AMPTFVF+K G+ +HKIVGAD+  L  K+EE K S  A AT
Sbjct: 61  FLKVDVDELNTVASEWEINAMPTFVFLKEGKVLHKIVGADKVGLASKLEEYKNS--APAT 120

Query: 121 STA 124
           STA
Sbjct: 121 STA 121

[Close]
BLAST of Cucsa.231850 vs. TrEMBL
Match: C5XB72_SORBI (Thioredoxin OS=Sorghum bicolor GN=Sb02g004850 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.4e-31
Identity = 69/115 (60.00%), Postives = 88/115 (76.52%), Query Frame = 1 

Query: 3   EEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVMFI 62
           EEG VIACH ++E++A +AKAKE+GKLVV+DFTASWCGPCR IAP F E AK ++  +F+
Sbjct: 4   EEGVVIACHTKAEFDAQMAKAKEAGKLVVIDFTASWCGPCRAIAPLFVEHAKKYTQAVFL 63

Query: 63  KVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTA 118
           KVDVDEL  + +E+KI AMPTF F+K GETV  IVGA +  LL  I++   S +A
Sbjct: 64  KVDVDELKEVTAEYKIEAMPTFHFIKNGETVETIVGARKDELLALIQKHTASASA 118

[Close]
BLAST of Cucsa.231850 vs. TrEMBL
Match: Q00P17_EUCGR (Thioredoxin h OS=Eucalyptus grandis PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.5e-31
Identity = 64/104 (61.54%), Postives = 78/104 (75.00%), Query Frame = 1 

Query: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60
           M EEGQVI+CH    W   +AK+ ES KLVVVDFTASWCGPCR IAP+ +ELAK    V+
Sbjct: 1   MAEEGQVISCHSAESWSEQIAKSNESDKLVVVDFTASWCGPCRFIAPFLAELAKRFPNVL 60

Query: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAAL 105
           F+KVDVDEL  +A EW + AMPTF+FVKGG+ V ++VGA +  L
Sbjct: 61  FLKVDVDELKTVAQEWAVEAMPTFMFVKGGKIVDRVVGAQKDQL 104

[Close]
BLAST of Cucsa.231850 vs. TrEMBL
Match: A0A059AS55_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02383 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.5e-31
Identity = 64/104 (61.54%), Postives = 78/104 (75.00%), Query Frame = 1 

Query: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60
           M EEGQVI+CH    W   +AK+ ES KLVVVDFTASWCGPCR IAP+ +ELAK    V+
Sbjct: 1   MAEEGQVISCHSAESWSEQIAKSNESDKLVVVDFTASWCGPCRFIAPFLAELAKKFPNVL 60

Query: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAAL 105
           F+KVDVDEL  +A EW + AMPTF+FVKGG+ V ++VGA +  L
Sbjct: 61  FLKVDVDELKTVAQEWAVEAMPTFMFVKGGKIVDRVVGAQKDQL 104

[Close]
BLAST of Cucsa.231850 vs. TAIR10
Match: AT5G42980.1 (AT5G42980.1 thioredoxin 3)

HSP 1 Score: 136.0 bits (341), Expect = 1.6e-32
Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 1 

Query: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60
           M  EG+VIACH   +W   L  A ES KL+V+DFTA+WC PCR IAP F++LAK H  V+
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAA 119
           F KVDVDELN +A E+K+ AMPTF+F+K GE    +VGA +  ++  +E+ KT   AA
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAAA 118

[Close]
BLAST of Cucsa.231850 vs. TAIR10
Match: AT1G19730.1 (AT1G19730.1 Thioredoxin superfamily protein)

HSP 1 Score: 133.7 bits (335), Expect = 8.1e-32
Identity = 67/116 (57.76%), Postives = 81/116 (69.83%), Query Frame = 1 

Query: 3   EEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNH-SGVMF 62
           EEGQVI CH    W   L KAKES KL+V+DFTASWC PCR IAP F++LAK   S  +F
Sbjct: 4   EEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIF 63

Query: 63  IKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTA 118
            KVDVDEL ++A E+ + AMPTFVF+K GE V K+VGA++  L  KI +    TTA
Sbjct: 64  FKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGVTTA 119

[Close]
BLAST of Cucsa.231850 vs. TAIR10
Match: AT3G51030.1 (AT3G51030.1 thioredoxin H-type 1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-31
Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 1 

Query: 3   EEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVMFI 62
           EEGQVIACH    W   L KA ES  LVVVDFTASWCGPCR IAP+F++LAK    V+F+
Sbjct: 4   EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFL 63

Query: 63  KVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKI 109
           KVD DEL ++AS+W I AMPTF+F+K G+ + K+VGA +  L   I
Sbjct: 64  KVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

[Close]
BLAST of Cucsa.231850 vs. TAIR10
Match: AT1G45145.1 (AT1G45145.1 thioredoxin H-type 5)

HSP 1 Score: 125.9 bits (315), Expect = 1.7e-29
Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 1 

Query: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60
           M  EG+VIACH    W   +  A ES KL+V+DFTASWC PCR IAP F+E+AK  + V+
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKI 109
           F K+DVDEL A+A E+K+ AMPTFVF+K G  + ++VGA +  + +K+
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKL 108

[Close]
BLAST of Cucsa.231850 vs. TAIR10
Match: AT3G17880.1 (AT3G17880.1 tetraticopeptide domain-containing thioredoxin)

HSP 1 Score: 118.6 bits (296), Expect = 2.7e-27
Identity = 51/111 (45.95%), Postives = 82/111 (73.87%), Query Frame = 1 

Query: 4   EGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVMFIK 63
           +G+VI+ H  SE EA    AK++ +L+++ FTA+WCGPCR ++P +S LA  HS V+F+K
Sbjct: 269 DGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLK 328

Query: 64  VDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTS 115
           VD+D+ N +A+ W I+++PTF F++ G+ V K+VGAD+ +L +KI +  +S
Sbjct: 329 VDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIAQHSSS 379

[Close]
BLAST of Cucsa.231850 vs. NCBI nr
Match: gi|449469939|ref|XP_004152676.1| (PREDICTED: thioredoxin H-type [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-62
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1 

Query: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60
           MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM
Sbjct: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60

Query: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAAT 120
           FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAAT
Sbjct: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAAT 120

Query: 121 STA 124
           STA
Sbjct: 121 STA 123

[Close]
BLAST of Cucsa.231850 vs. NCBI nr
Match: gi|659088023|ref|XP_008444759.1| (PREDICTED: thioredoxin H1-like [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 1.6e-58
Identity = 117/123 (95.12%), Postives = 120/123 (97.56%), Query Frame = 1 

Query: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60
           MGEEGQVIACHKQSEW+ALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNH GVM
Sbjct: 1   MGEEGQVIACHKQSEWDALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHPGVM 60

Query: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAAT 120
           F+KVDVDELNAIASEWKI AMPTFVFVKGGET+HKIVGADRAALLKKIEELKTS TAAAT
Sbjct: 61  FLKVDVDELNAIASEWKINAMPTFVFVKGGETLHKIVGADRAALLKKIEELKTS-TAAAT 120

Query: 121 STA 124
           STA
Sbjct: 121 STA 122

[Close]
BLAST of Cucsa.231850 vs. NCBI nr
Match: gi|343466203|gb|AEM42995.1| (thioredoxin H [Siraitia grosvenorii])

HSP 1 Score: 175.6 bits (444), Expect = 5.2e-41
Identity = 84/123 (68.29%), Postives = 99/123 (80.49%), Query Frame = 1 

Query: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60
           M EEGQVI CHK +EW+  + K KESGKL+VVDFTASWCGPCR IAP F+ELAKN+  V+
Sbjct: 1   MAEEGQVIPCHKVAEWKEQIEKGKESGKLIVVDFTASWCGPCRAIAPLFTELAKNNPNVI 60

Query: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAAT 120
           F+KVDVDELN +ASEW+I AMPTFVF+K G+ +HKIVGAD+  L  K+EE K S  A AT
Sbjct: 61  FLKVDVDELNTVASEWEINAMPTFVFLKEGKVLHKIVGADKVGLASKLEEYKNS--APAT 120

Query: 121 STA 124
           STA
Sbjct: 121 STA 121

[Close]
BLAST of Cucsa.231850 vs. NCBI nr
Match: gi|729367028|ref|XP_010547452.1| (PREDICTED: thioredoxin H1 [Tarenaya hassleriana])

HSP 1 Score: 145.2 bits (365), Expect = 7.6e-32
Identity = 69/107 (64.49%), Postives = 82/107 (76.64%), Query Frame = 1 

Query: 2   GEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVMF 61
           GEEGQVIACH    W   L KA +S  LVVVDFTASWCGPCR I+P+FSELAK   GVMF
Sbjct: 3   GEEGQVIACHTVESWTDHLQKANDSNTLVVVDFTASWCGPCRFISPFFSELAKKLPGVMF 62

Query: 62  IKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKI 109
           +KVDVDEL ++AS+W I AMPTF+F+KGG+ V K+VGA +  L + I
Sbjct: 63  LKVDVDELKSVASDWAIEAMPTFMFLKGGKIVDKVVGAKKDELQQTI 109

[Close]
BLAST of Cucsa.231850 vs. NCBI nr
Match: gi|992276007|gb|KXG34557.1| (hypothetical protein SORBI_002G057900 [Sorghum bicolor])

HSP 1 Score: 142.5 bits (358), Expect = 4.9e-31
Identity = 69/115 (60.00%), Postives = 88/115 (76.52%), Query Frame = 1 

Query: 3   EEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVMFI 62
           EEG VIACH ++E++A +AKAKE+GKLVV+DFTASWCGPCR IAP F E AK ++  +F+
Sbjct: 42  EEGVVIACHTKAEFDAQMAKAKEAGKLVVIDFTASWCGPCRAIAPLFVEHAKKYTQAVFL 101

Query: 63  KVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTA 118
           KVDVDEL  + +E+KI AMPTF F+K GETV  IVGA +  LL  I++   S +A
Sbjct: 102 KVDVDELKEVTAEYKIEAMPTFHFIKNGETVETIVGARKDELLALIQKHTASASA 156

The following BLAST results are available for this feature:
BLAST of Cucsa.231850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRXH_FAGES1.3e-3160.19Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1[more]
TRXH3_ARATH2.9e-3153.39Thioredoxin H3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1[more]
TRXH1_ORYSJ1.1e-3052.10Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1[more]
TRXH_ORYSI1.1e-3052.10Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1[more]
TRXH4_ARATH1.4e-3057.76Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2[more]
BLAST of Cucsa.231850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRK2_CUCSA9.9e-63100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G362490 PE=4 SV=1[more]
K7NBX3_SIRGR3.7e-4168.29Thioredoxin H OS=Siraitia grosvenorii PE=2 SV=1[more]
C5XB72_SORBI3.4e-3160.00Thioredoxin OS=Sorghum bicolor GN=Sb02g004850 PE=3 SV=1[more]
Q00P17_EUCGR4.5e-3161.54Thioredoxin h OS=Eucalyptus grandis PE=2 SV=1[more]
A0A059AS55_EUCGR4.5e-3161.54Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02383 PE=4 SV=1[more]
BLAST of Cucsa.231850 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G42980.11.6e-3253.39 thioredoxin 3[more]
AT1G19730.18.1e-3257.76 Thioredoxin superfamily protein[more]
AT3G51030.11.1e-3159.43 thioredoxin H-type 1[more]
AT1G45145.11.7e-2952.78 thioredoxin H-type 5[more]
AT3G17880.12.7e-2745.95 tetraticopeptide domain-containing thioredoxin[more]
BLAST of Cucsa.231850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469939|ref|XP_004152676.1|1.4e-62100.00PREDICTED: thioredoxin H-type [Cucumis sativus][more]
gi|659088023|ref|XP_008444759.1|1.6e-5895.12PREDICTED: thioredoxin H1-like [Cucumis melo][more]
gi|343466203|gb|AEM42995.1|5.2e-4168.29thioredoxin H [Siraitia grosvenorii][more]
gi|729367028|ref|XP_010547452.1|7.6e-3264.49PREDICTED: thioredoxin H1 [Tarenaya hassleriana][more]
gi|992276007|gb|KXG34557.1|4.9e-3160.00hypothetical protein SORBI_002G057900 [Sorghum bicolor][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.231850.1Cucsa.231850.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 3..117
score: 2.2
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 7..111
score: 2.6
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 5..113
score: 1.06
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 8..109
score: 1.2
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 1..113
score: 14
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 31..49
scor
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 38..47
score: 1.1E-6coord: 30..38
score: 1.1E-6coord: 77..88
score: 1.
NoneNo IPR availablePANTHERPTHR10438:SF274THIOREDOXIN H1coord: 3..117
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.231850Cla020798Watermelon (97103) v1cgywmB434
Cucsa.231850Csa3G865340Cucumber (Chinese Long) v2cgycuB327
Cucsa.231850MELO3C003791Melon (DHL92) v3.5.1cgymeB390
Cucsa.231850ClCG05G018670Watermelon (Charleston Gray)cgywcgB406
Cucsa.231850CSPI03G43060Wild cucumber (PI 183967)cgycpiB342
Cucsa.231850CmaCh05G002720Cucurbita maxima (Rimu)cgycmaB0642
Cucsa.231850Lsi01G006340Bottle gourd (USVL1VR-Ls)cgylsiB375
Cucsa.231850Carg04024Silver-seed gourdcarcgyB1094
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.231850Melon (DHL92) v3.6.1cgymedB387
Cucsa.231850Melon (DHL92) v3.6.1cgymedB388
Cucsa.231850Melon (DHL92) v3.6.1cgymedB391
Cucsa.231850Silver-seed gourdcarcgyB0124
Cucsa.231850Silver-seed gourdcarcgyB0222
Cucsa.231850Silver-seed gourdcarcgyB1065
Cucsa.231850Cucumber (Chinese Long) v3cgycucB347
Cucsa.231850Cucumber (Chinese Long) v3cgycucB348
Cucsa.231850Watermelon (97103) v2cgywmbB407
Cucsa.231850Watermelon (97103) v2cgywmbB408
Cucsa.231850Watermelon (97103) v2cgywmbB409
Cucsa.231850Wax gourdcgywgoB459
Cucsa.231850Cucumber (Gy14) v1cgycgyB120
Cucsa.231850Cucurbita maxima (Rimu)cgycmaB0637
Cucsa.231850Cucurbita maxima (Rimu)cgycmaB0638
Cucsa.231850Cucurbita maxima (Rimu)cgycmaB0639
Cucsa.231850Cucurbita maxima (Rimu)cgycmaB0640
Cucsa.231850Cucurbita moschata (Rifu)cgycmoB0640
Cucsa.231850Cucurbita moschata (Rifu)cgycmoB0641
Cucsa.231850Cucurbita moschata (Rifu)cgycmoB0642
Cucsa.231850Cucurbita moschata (Rifu)cgycmoB0643
Cucsa.231850Wild cucumber (PI 183967)cgycpiB341
Cucsa.231850Cucumber (Chinese Long) v2cgycuB326
Cucsa.231850Melon (DHL92) v3.5.1cgymeB389
Cucsa.231850Watermelon (Charleston Gray)cgywcgB407
Cucsa.231850Watermelon (97103) v1cgywmB433
Cucsa.231850Cucurbita pepo (Zucchini)cgycpeB0610
Cucsa.231850Cucurbita pepo (Zucchini)cgycpeB0611
Cucsa.231850Cucurbita pepo (Zucchini)cgycpeB0612
Cucsa.231850Cucurbita pepo (Zucchini)cgycpeB0613
Cucsa.231850Cucurbita pepo (Zucchini)cgycpeB0614
Cucsa.231850Bottle gourd (USVL1VR-Ls)cgylsiB377
Cucsa.231850Bottle gourd (USVL1VR-Ls)cgylsiB379