Cucsa.228010 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.228010
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Defensin-like protein 2
Location	scaffold01933 : 8643 .. 9308 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATACACACACAGCTTTAGTTTTAGAATTGAATTTTAATTATTATTCGAATATTATAAGAATGATGATGATGAACAAATCCTTGGTTCCAACGCTGCTAGTGCTGCTGCTCATCTTCTCTGCTTCAGGTAAATAATTAGTTTGTTAATTTTAGGGTTTAGTTTTTATAATAACTTAATATTAGTTTGAAATAATAATGATGATCATCATATGCAACGCAGAAGAGATGATGGGGGGTGGTGCTGAGGCTCGAATGTGCCAATCTCAGAGCCACCACTTCCACGGACCATGTGTACGTGACCACAACTGCGCTCTTGTCTGTCGCACCGAAGGCTTCTCAGGCGGTGAATGTATTGGTTTCCGCCGCCGCTGCTTCTGCACTCACCGTTGCTAGCTACCTACCTAATTTCTTTTTAATTCGCTATATGCTATGTCTTTTTTTTTTTTGTTTTTTTTGTTTATCATCTCCTTCCTCTGATCCTCTTCCTATCACTACTATATCATCACCTTTAATTTACCTTTCCATTTCATGAATAAACATAACTACTTCTTTATTGAAACTCCTAGCCTACCTAGCTTATAAGCTCTTAATTATTCTCAAGGTTAATTATATATTTCACTAAAGTAGTGTGTAATTAATCAAAATCTCTCAAGTGCATGAACTAA

mRNA sequence

TCATACACACACAGCTTTAGTTTTAGAATTGAATTTTAATTATTATTCGAATATTATAAGAATGATGATGATGAACAAATCCTTGGTTCCAACGCTGCTAGTGCTGCTGCTCATCTTCTCTGCTTCAGAAGAGATGATGGGGGGTGGTGCTGAGGCTCGAATGTGCCAATCTCAGAGCCACCACTTCCACGGACCATGTGTACGTGACCACAACTGCGCTCTTGTCTGTCGCACCGAAGGCTTCTCAGGCGGTGAATGTATTGGTTTCCGCCGCCGCTGCTTCTGCACTCACCGTTGCTAGCTACCTACCTAATTTCTTTTTAATTCGCTATATGCTATGTCTTTTTTTTTTTTGTTTTTTTTGTTTATCATCTCCTTCCTCTGATCCTCTTCCTATCACTACTATATCATCACCTTTAATTTACCTTTCCATTTCATGAATAAACATAACTACTTCTTTATTGAAACTCCTAGCCTACCTAGCTTATAAGCTCTTAATTATTCTCAAGGTTAATTATATATTTCACTAAAGTAGTGTGTAATTAATCAAAATCTCTCAAGTGCATGAACTAA

Coding sequence (CDS)

ATGATGATGATGAACAAATCCTTGGTTCCAACGCTGCTAGTGCTGCTGCTCATCTTCTCTGCTTCAGAAGAGATGATGGGGGGTGGTGCTGAGGCTCGAATGTGCCAATCTCAGAGCCACCACTTCCACGGACCATGTGTACGTGACCACAACTGCGCTCTTGTCTGTCGCACCGAAGGCTTCTCAGGCGGTGAATGTATTGGTTTCCGCCGCCGCTGCTTCTGCACTCACCGTTGCTAG

Protein sequence

MMMMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGFSGGECIGFRRRCFCTHRC*

Homology

[Close]

BLAST of Cucsa.228010 vs. Swiss-Prot
Match: DEF_PETIN (Defensin-like protein OS=Petunia integrifolia PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.1e-18
Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 1


Query: 8  LVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGFSGGECI 67
          L  T  ++ ++F ++E      AEAR C+SQSH FHG CVR+ NCA VC+TEGF GG C 
Sbjct: 7  LFATFFLIAMLFLSTEMGPMTSAEARTCESQSHRFHGTCVRESNCASVCQTEGFIGGNCR 66

Query: 68 GFRRRCFCTHRC 80
           FRRRCFCT  C
Sbjct: 67 AFRRRCFCTRNC 78

[Close]

BLAST of Cucsa.228010 vs. Swiss-Prot
Match: DEF06_ARATH (Defensin-like protein 6 OS=Arabidopsis thaliana GN=PDF2.5 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.9e-18
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 15 LLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGFSGGECIGFRRRCF 74
          LLL+  +S+E++GG  E R CQS+SHHF   C  +HNCA+VCR EGFSGG C GF RRC+
Sbjct: 11 LLLVLFSSQEIIGG--EGRTCQSKSHHFKYMCTSNHNCAIVCRNEGFSGGRCHGFHRRCY 70

Query: 75 CTHRC 80
          CT  C
Sbjct: 71 CTRLC 73

[Close]

BLAST of Cucsa.228010 vs. Swiss-Prot
Match: DEF01_ARATH (Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 9.9e-17
Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 1


Query: 2  MMMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGF 61
          M ++   +   L+L ++F A+  M     EAR C+S+SH F GPCV  HNCA VC  EGF
Sbjct: 1  MKLSVRFISAALLLFMVFIATG-MGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGF 60

Query: 62 SGGECIGFRRRCFCTHRC 80
           GG+C GFRRRC+CT  C
Sbjct: 61 GGGKCRGFRRRCYCTRHC 77

[Close]

BLAST of Cucsa.228010 vs. Swiss-Prot
Match: DEF1_VIGUN (Defensin-like protein 1 OS=Vigna unguiculata PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-16
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = 1


Query: 33 RMCQSQSHHFHGPCVRDHNCALVCRTEGFSGGECIGFRRRCFCTHRC 80
          R+C+SQSH F G C  DHNCALVCR EGFSGG C GFRRRCFCT +C
Sbjct: 1  RVCESQSHGFKGACTGDHNCALVCRNEGFSGGNCRGFRRRCFCTLKC 47

[Close]

BLAST of Cucsa.228010 vs. Swiss-Prot
Match: DEF_SOYBN (Defensin-like protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-16
Identity = 44/78 (56.41%), Postives = 51/78 (65.38%), Query Frame = 1


Query: 2  MMMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGF 61
          M M KS     L+LLL+F++   +     E R+C+SQSH FHG C RDHNCALVCR EGF
Sbjct: 1  MEMRKSCGFFFLLLLLVFASQVVVQ---TEGRVCESQSHGFHGLCNRDHNCALVCRNEGF 60

Query: 62 SGGECIGFRRRCFCTHRC 80
          SGG C    RRCFCT  C
Sbjct: 61 SGGRC-KRSRRCFCTRIC 74

[Close]

BLAST of Cucsa.228010 vs. TrEMBL
Match: A0A0A0LN65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G340400 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 9.0e-41
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1


Query: 1   MMMMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEG 60
           MMMMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEG
Sbjct: 29  MMMMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEG 88

Query: 61  FSGGECIGFRRRCFCTHRC 80
           FSGGECIGFRRRCFCTHRC
Sbjct: 89  FSGGECIGFRRRCFCTHRC 107

[Close]

BLAST of Cucsa.228010 vs. TrEMBL
Match: W5RNL9_CITLA (Defensin-like protein 2 OS=Citrullus lanatus GN=PDF2.2 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 9.9e-32
Identity = 64/78 (82.05%), Postives = 72/78 (92.31%), Query Frame = 1


Query: 3  MMNKSLVPTLLVLLLIFSASEEMMGGG-AEARMCQSQSHHFHGPCVRDHNCALVCRTEGF 62
          MMNKS +PTLL+LLLIFSASEEMMGGG AE R+C+SQSH FHGPC+RDHNCA+VCRTEGF
Sbjct: 1  MMNKSFLPTLLLLLLIFSASEEMMGGGRAEGRVCKSQSHSFHGPCMRDHNCAVVCRTEGF 60

Query: 63 SGGECIGFRRRCFCTHRC 80
          SGG+C+GFRRRCFCT  C
Sbjct: 61 SGGDCVGFRRRCFCTRLC 78

[Close]

BLAST of Cucsa.228010 vs. TrEMBL
Match: A0A0J8CII0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g084090 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.3e-20
Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 1


Query: 3  MMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTE-GF 62
          M  KS V  L +LLL+F AS+ ++   AEARMC+S SHHF GPC++DHNCA+VCRTE GF
Sbjct: 1  MERKSAV--LYILLLVFFASQGLVHQ-AEARMCESPSHHFEGPCMKDHNCAMVCRTEGGF 60

Query: 63 SGGECIGFRRRCFCTHRC 80
          SGG C+GFRRRCFCT  C
Sbjct: 61 SGGHCVGFRRRCFCTKGC 75

[Close]

BLAST of Cucsa.228010 vs. TrEMBL
Match: A0A103XBD3_CYNCS (Gamma Purothionin OS=Cynara cardunculus var. scolymus GN=Ccrd_025129 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 6.7e-20
Identity = 48/77 (62.34%), Postives = 56/77 (72.73%), Query Frame = 1


Query: 3  MMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGFS 62
          M  K++   L  LLL+F++S+     GAEARMCQSQSH +HG C  +HNCALVCR EGFS
Sbjct: 5  MATKTIAMLLFTLLLLFTSSQL----GAEARMCQSQSHKYHGACFHNHNCALVCRNEGFS 64

Query: 63 GGECIGFRRRCFCTHRC 80
          GG C GFRRRCFCT  C
Sbjct: 65 GGICRGFRRRCFCTRLC 77

[Close]

BLAST of Cucsa.228010 vs. TrEMBL
Match: M5XGS9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013508mg PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.5e-19
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 1


Query: 12  LLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGFSGGECIGFRR 71
           L++LL I  AS+EM+   +EAR+CQSQSH F GPC+R HNCALVCR EGFSGG C GFRR
Sbjct: 53  LVLLLFIVLASQEMVVP-SEARVCQSQSHGFRGPCIRHHNCALVCRNEGFSGGRCRGFRR 112

Query: 72  RCFCTHRC 80
           RCFCT  C
Sbjct: 113 RCFCTRLC 119

[Close]

BLAST of Cucsa.228010 vs. TAIR10
Match: AT5G63660.1 (AT5G63660.1 Scorpion toxin-like knottin superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 3.9e-19
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 15 LLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGFSGGECIGFRRRCF 74
          LLL+  +S+E++GG  E R CQS+SHHF   C  +HNCA+VCR EGFSGG C GF RRC+
Sbjct: 11 LLLVLFSSQEIIGG--EGRTCQSKSHHFKYMCTSNHNCAIVCRNEGFSGGRCHGFHRRCY 70

Query: 75 CTHRC 80
          CT  C
Sbjct: 71 CTRLC 73

[Close]

BLAST of Cucsa.228010 vs. TAIR10
Match: AT2G02130.1 (AT2G02130.1 low-molecular-weight cysteine-rich 68)

HSP 1 Score: 87.0 bits (214), Expect = 5.6e-18
Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 1


Query: 2  MMMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGF 61
          M ++   +   L+L ++F A+  M     EAR C+S+SH F GPCV  HNCA VC  EGF
Sbjct: 1  MKLSVRFISAALLLFMVFIATG-MGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGF 60

Query: 62 SGGECIGFRRRCFCTHRC 80
           GG+C GFRRRC+CT  C
Sbjct: 61 GGGKCRGFRRRCYCTRHC 77

[Close]

BLAST of Cucsa.228010 vs. TAIR10
Match: AT2G02100.1 (AT2G02100.1 low-molecular-weight cysteine-rich 69)

HSP 1 Score: 84.7 bits (208), Expect = 2.8e-17
Identity = 40/78 (51.28%), Postives = 49/78 (62.82%), Query Frame = 1


Query: 2  MMMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGF 61
          M ++  L+  +L++ +IF A+  M     EAR C+SQSH F G CV   NCA VC  EGF
Sbjct: 1  MKLSMRLISAVLIMFMIFVATG-MGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGF 60

Query: 62 SGGECIGFRRRCFCTHRC 80
           GG C GFRRRCFCT  C
Sbjct: 61 VGGNCRGFRRRCFCTRHC 77

[Close]

BLAST of Cucsa.228010 vs. TAIR10
Match: AT2G02120.1 (AT2G02120.1 Scorpion toxin-like knottin superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 3.1e-16
Identity = 40/78 (51.28%), Postives = 47/78 (60.26%), Query Frame = 1


Query: 2  MMMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGF 61
          M  +  L+  +L L++IF A+  M     EAR C SQS  F G CV D NC  VC  EGF
Sbjct: 1  MKFSMRLISAVLFLVMIFVATG-MGPVTVEARTCASQSQRFKGKCVSDTNCENVCHNEGF 60

Query: 62 SGGECIGFRRRCFCTHRC 80
           GG+C GFRRRCFCT  C
Sbjct: 61 PGGDCRGFRRRCFCTRNC 77

[Close]

BLAST of Cucsa.228010 vs. TAIR10
Match: AT1G61070.1 (AT1G61070.1 low-molecular-weight cysteine-rich 66)

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-14
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 1


Query: 15 LLLIFSASEEMMG-GGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGFSGGECIGFRRRC 74
          LLL+F     +MG    EAR C++ S+ F+GPC+   NCA VC  EGFS G+C GFRRRC
Sbjct: 11 LLLLFMILATVMGLVTVEARTCETSSNLFNGPCLSSSNCANVCHNEGFSDGDCRGFRRRC 70

Query: 75 FCTHRC 80
           CT  C
Sbjct: 71 LCTRPC 76

[Close]

BLAST of Cucsa.228010 vs. NCBI nr
Match: gi|700207128|gb|KGN62247.1| (hypothetical protein Csa_2G340400 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 1.3e-40
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1


Query: 1   MMMMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEG 60
           MMMMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEG
Sbjct: 29  MMMMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEG 88

Query: 61  FSGGECIGFRRRCFCTHRC 80
           FSGGECIGFRRRCFCTHRC
Sbjct: 89  FSGGECIGFRRRCFCTHRC 107

[Close]

BLAST of Cucsa.228010 vs. NCBI nr
Match: gi|558067066|gb|AHA50468.1| (defensin-like protein 2 [Citrullus lanatus])

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-31
Identity = 64/78 (82.05%), Postives = 72/78 (92.31%), Query Frame = 1


Query: 3  MMNKSLVPTLLVLLLIFSASEEMMGGG-AEARMCQSQSHHFHGPCVRDHNCALVCRTEGF 62
          MMNKS +PTLL+LLLIFSASEEMMGGG AE R+C+SQSH FHGPC+RDHNCA+VCRTEGF
Sbjct: 1  MMNKSFLPTLLLLLLIFSASEEMMGGGRAEGRVCKSQSHSFHGPCMRDHNCAVVCRTEGF 60

Query: 63 SGGECIGFRRRCFCTHRC 80
          SGG+C+GFRRRCFCT  C
Sbjct: 61 SGGDCVGFRRRCFCTRLC 78

[Close]

BLAST of Cucsa.228010 vs. NCBI nr
Match: gi|870862149|gb|KMT13372.1| (hypothetical protein BVRB_4g084090 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 105.9 bits (263), Expect = 3.3e-20
Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 1


Query: 3  MMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTE-GF 62
          M  KS V  L +LLL+F AS+ ++   AEARMC+S SHHF GPC++DHNCA+VCRTE GF
Sbjct: 1  MERKSAV--LYILLLVFFASQGLVHQ-AEARMCESPSHHFEGPCMKDHNCAMVCRTEGGF 60

Query: 63 SGGECIGFRRRCFCTHRC 80
          SGG C+GFRRRCFCT  C
Sbjct: 61 SGGHCVGFRRRCFCTKGC 75

[Close]

BLAST of Cucsa.228010 vs. NCBI nr
Match: gi|1000979199|ref|XP_015571070.1| (PREDICTED: defensin-like protein 1 [Ricinus communis])

HSP 1 Score: 105.5 bits (262), Expect = 4.3e-20
Identity = 48/78 (61.54%), Postives = 61/78 (78.21%), Query Frame = 1


Query: 3  MMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEG-F 62
          M  +SL   LL+L+++  + + ++    EAR+C+S+SHHFHGPC+RDHNCALVCRTEG F
Sbjct: 1  MEKRSLGLFLLMLIVLLGSQDVVLP--TEARVCESKSHHFHGPCLRDHNCALVCRTEGNF 60

Query: 63 SGGECIGFRRRCFCTHRC 80
          SGG C GFRRRCFCT RC
Sbjct: 61 SGGRCRGFRRRCFCTRRC 76

[Close]

BLAST of Cucsa.228010 vs. NCBI nr
Match: gi|502137225|ref|XP_004503014.1| (PREDICTED: defensin-like protein 1 isoform X1 [Cicer arietinum])

HSP 1 Score: 104.8 bits (260), Expect = 7.3e-20
Identity = 52/77 (67.53%), Postives = 55/77 (71.43%), Query Frame = 1


Query: 3  MMNKSLVPTLLVLLLIFSASEEMMGGGAEARMCQSQSHHFHGPCVRDHNCALVCRTEGFS 62
          M  KSL   LL+LL I  AS EM+   AE R+C SQSH F GPCV DHNCALVCR EGFS
Sbjct: 1  MERKSLA--LLILLFIAFASPEMVMKTAEGRVCASQSHAFKGPCVGDHNCALVCRNEGFS 60

Query: 63 GGECIGFRRRCFCTHRC 80
          GG C GFRRRCFCT  C
Sbjct: 61 GGNCQGFRRRCFCTKLC 75

The following BLAST results are available for this feature:

BLAST of Cucsa.228010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DEF_PETIN	3.1e-18	55.56	Defensin-like protein OS=Petunia integrifolia PE=2 SV=1	[more]
DEF06_ARATH	6.9e-18	60.00	Defensin-like protein 6 OS=Arabidopsis thaliana GN=PDF2.5 PE=3 SV=1	[more]
DEF01_ARATH	9.9e-17	50.00	Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3 PE=2 SV=1	[more]
DEF1_VIGUN	2.2e-16	74.47	Defensin-like protein 1 OS=Vigna unguiculata PE=1 SV=1	[more]
DEF_SOYBN	2.2e-16	56.41	Defensin-like protein OS=Glycine max PE=3 SV=1	[more]

BLAST of Cucsa.228010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN65_CUCSA	9.0e-41	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G340400 PE=3 SV=1	[more]
W5RNL9_CITLA	9.9e-32	82.05	Defensin-like protein 2 OS=Citrullus lanatus GN=PDF2.2 PE=2 SV=1	[more]
A0A0J8CII0_BETVU	2.3e-20	65.38	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g084090 PE=3 S...	[more]
A0A103XBD3_CYNCS	6.7e-20	62.34	Gamma Purothionin OS=Cynara cardunculus var. scolymus GN=Ccrd_025129 PE=3 SV=1	[more]
M5XGS9_PRUPE	2.5e-19	69.12	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013508mg PE=3 SV=1	[more]

BLAST of Cucsa.228010 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63660.1	3.9e-19	60.00	Scorpion toxin-like knottin superfamily protein	[more]
AT2G02130.1	5.6e-18	50.00	low-molecular-weight cysteine-rich 68	[more]
AT2G02100.1	2.8e-17	51.28	low-molecular-weight cysteine-rich 69	[more]
AT2G02120.1	3.1e-16	51.28	Scorpion toxin-like knottin superfamily protein	[more]
AT1G61070.1	1.7e-14	53.03	low-molecular-weight cysteine-rich 66	[more]

BLAST of Cucsa.228010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207128\|gb\|KGN62247.1\|	1.3e-40	100.00	hypothetical protein Csa_2G340400 [Cucumis sativus]	[more]
gi\|558067066\|gb\|AHA50468.1\|	1.4e-31	82.05	defensin-like protein 2 [Citrullus lanatus]	[more]
gi\|870862149\|gb\|KMT13372.1\|	3.3e-20	65.38	hypothetical protein BVRB_4g084090 [Beta vulgaris subsp. vulgaris]	[more]
gi\|1000979199\|ref\|XP_015571070.1\|	4.3e-20	61.54	PREDICTED: defensin-like protein 1 [Ricinus communis]	[more]
gi\|502137225\|ref\|XP_004503014.1\|	7.3e-20	67.53	PREDICTED: defensin-like protein 1 isoform X1 [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003614	Scorpion_toxin-like
IPR008176	Defensin_plant

Vocabulary: **Biological Process**
Term	Definition
GO:0006952	defense response

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.228010.1	Cucsa.228010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003614	Knottin, scorpion toxin-like	GENE3D	G3DSA:3.30.30.10		coord: 33..79 score: 3.5
IPR003614	Knottin, scorpion toxin-like	SMART	SM00505	gth_4	coord: 34..79 score: 1.7
IPR003614	Knottin, scorpion toxin-like	unknown	SSF57095	Scorpion toxin-like	coord: 33..79 score: 5.18
IPR008176	Defensin, plant	PRINTS	PR00288	PUROTHIONIN	coord: 34..49 score: 1.0E-7coord: 64..78 score: 1.
IPR008176	Defensin, plant	PROSITE	PS00940	GAMMA_THIONIN	coord: 33..56 scor
None	No IPR available	PANTHER	PTHR33147	FAMILY NOT NAMED	coord: 4..79 score: 4.6
None	No IPR available	PANTHER	PTHR33147:SF3	DEFENSIN-LIKE PROTEIN 6	coord: 4..79 score: 4.6
None	No IPR available	PFAM	PF00304	Gamma-thionin	coord: 33..79 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.228010	Cla007847	Watermelon (97103) v1	cgywmB430
Cucsa.228010	Csa2G340400	Cucumber (Chinese Long) v2	cgycuB324
Cucsa.228010	MELO3C023203	Melon (DHL92) v3.5.1	cgymeB387
Cucsa.228010	ClCG02G000130	Watermelon (Charleston Gray)	cgywcgB402
Cucsa.228010	CSPI02G16610	Wild cucumber (PI 183967)	cgycpiB339
Cucsa.228010	Lsi10G007770	Bottle gourd (USVL1VR-Ls)	cgylsiB372
Cucsa.228010	MELO3C023203.2	Melon (DHL92) v3.6.1	cgymedB385
Cucsa.228010	CsaV3_2G019810	Cucumber (Chinese Long) v3	cgycucB344
Cucsa.228010	Cla97C02G026360	Watermelon (97103) v2	cgywmbB404

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.228010	Wax gourd	cgywgoB455