Cucsa.218750 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGATCCCAAATATGCCTATCCCTACCCACCTCCTCAAGGTATGTTGAGCTAGCTATGTTCAGGTTGGTAATTCCGTTGTTACGTTTTGTTTGATTTAGTAATTTGGGGTGGTGTGGATTTATTTGCAGGAGGATATTATCAAGGGCCACCAGTGATGGCGCCACCGCAGTACGCCGCCCCACCGCCAAGACGACAACCGGGTTTCTTGGAGGGATGGTATGCCAAAAAGCTTCTTCTTTTTGTTGATAATTAAACTCTCTCTTTAATTGTTCTGGTTTTGCTTGCATATATCAAAACTGAAGGTTTGAATTGAGAGTGTTAGGATGATCTAAAGAAAATTTATATCTGTACTACCGTGATAAAAGATAGAACTTGAACATGCTGCCTTTGATTTAGTTTCTTGACATCTTTCTTTCTCGGGTGCTAAACATATCGAAGTGACGAGATCGTCTATGAAGTTTGAACTACATCTTAGGTTTGGATTCTATGTTTTCTTTAGTGTGGCTTAACAGAGGGTTTCACTTTGTGTTTGCAGCCTTGCAGCTCTATGCTGCTGCTGTCTCCTTGATGAATGCTGCTGTGACCCTTCCATTATCTTTCTTACTTGATGCTATGAGAGAATTCATTGCCTTTGTAGCTGTAAATTGCCTCATCTCTTATCTCTTTTCTTTTCTTATTTTGTGAGTGTGGTTTTATTTTGTGTAAACTTGGAAAGAACATTGATTGGTGTGCAGAATAAAAGCTGCTTTGCTGTAAAGTATATTA ATGAGTGATCCCAAATATGCCTATCCCTACCCACCTCCTCAAGGAGGATATTATCAAGGGCCACCAGTGATGGCGCCACCGCAGTACGCCGCCCCACCGCCAAGACGACAACCGGGTTTCTTGGAGGGATGCCTTGCAGCTCTATGCTGCTGCTGTCTCCTTGATGAATGCTGCTGTGACCCTTCCATTATCTTTCTTACTTGATGCTATGAGAGAATTCATTGCCTTTGTAGCTGTAAATTGCCTCATCTCTTATCTCTTTTCTTTTCTTATTTTGTGAGTGTGGTTTTATTTTGTGTAAACTTGGAAAGAACATTGATTGGTGTGCAGAATAAAAGCTGCTTTGCTGTAAAGTATATTA ATGAGTGATCCCAAATATGCCTATCCCTACCCACCTCCTCAAGGAGGATATTATCAAGGGCCACCAGTGATGGCGCCACCGCAGTACGCCGCCCCACCGCCAAGACGACAACCGGGTTTCTTGGAGGGATGCCTTGCAGCTCTATGCTGCTGCTGTCTCCTTGATGAATGCTGCTGTGACCCTTCCATTATCTTTCTTACTTGA MSDPKYAYPYPPPQGGYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLLDECCCDPSIIFLT*
BLAST of Cucsa.218750 vs. Swiss-Prot
Match: CYT1A_ARATH (Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thaliana GN=At2g41420 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.8e-11 Identity = 38/65 (58.46%), Postives = 39/65 (60.00%), Query Frame = 1
BLAST of Cucsa.218750 vs. Swiss-Prot
Match: CYT1B_ARATH (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana GN=At3g57160 PE=3 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 2.5e-08 Identity = 36/79 (45.57%), Postives = 40/79 (50.63%), Query Frame = 1
BLAST of Cucsa.218750 vs. TrEMBL
Match: B9SMJ5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0230320 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.2e-30 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 1
BLAST of Cucsa.218750 vs. TrEMBL
Match: A0A0D2NVV1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G036100 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.1e-30 Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 1
BLAST of Cucsa.218750 vs. TrEMBL
Match: V7CN31_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G143000g PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.1e-30 Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 1
BLAST of Cucsa.218750 vs. TrEMBL
Match: A0A0B0N6W8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_33724 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 6.0e-30 Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 1
BLAST of Cucsa.218750 vs. TrEMBL
Match: D7T5D4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0415g00070 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 6.0e-30 Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 1
BLAST of Cucsa.218750 vs. TAIR10
Match: AT4G33660.1 (AT4G33660.1 unknown protein) HSP 1 Score: 102.4 bits (254), Expect = 1.1e-22 Identity = 50/74 (67.57%), Postives = 53/74 (71.62%), Query Frame = 1
BLAST of Cucsa.218750 vs. TAIR10
Match: AT2G41420.1 (AT2G41420.1 proline-rich family protein) HSP 1 Score: 69.3 bits (168), Expect = 1.0e-12 Identity = 38/65 (58.46%), Postives = 39/65 (60.00%), Query Frame = 1
BLAST of Cucsa.218750 vs. TAIR10
Match: AT5G67600.1 (AT5G67600.1 unknown protein) HSP 1 Score: 67.4 bits (163), Expect = 3.9e-12 Identity = 36/63 (57.14%), Postives = 39/63 (61.90%), Query Frame = 1
BLAST of Cucsa.218750 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein) HSP 1 Score: 58.9 bits (141), Expect = 1.4e-09 Identity = 34/86 (39.53%), Postives = 39/86 (45.35%), Query Frame = 1
BLAST of Cucsa.218750 vs. TAIR10
Match: AT2G32190.1 (AT2G32190.1 unknown protein) HSP 1 Score: 55.1 bits (131), Expect = 2.0e-08 Identity = 27/59 (45.76%), Postives = 33/59 (55.93%), Query Frame = 1
BLAST of Cucsa.218750 vs. NCBI nr
Match: gi|223533390|gb|EEF35140.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 139.8 bits (351), Expect = 1.7e-30 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 1
BLAST of Cucsa.218750 vs. NCBI nr
Match: gi|719995883|ref|XP_010254642.1| (PREDICTED: uncharacterized protein LOC104595564 [Nelumbo nucifera]) HSP 1 Score: 139.4 bits (350), Expect = 2.3e-30 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 1
BLAST of Cucsa.218750 vs. NCBI nr
Match: gi|763750765|gb|KJB18153.1| (hypothetical protein B456_003G036100 [Gossypium raimondii]) HSP 1 Score: 139.0 bits (349), Expect = 3.0e-30 Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 1
BLAST of Cucsa.218750 vs. NCBI nr
Match: gi|593790566|ref|XP_007158322.1| (hypothetical protein PHAVU_002G143000g [Phaseolus vulgaris]) HSP 1 Score: 139.0 bits (349), Expect = 3.0e-30 Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 1
BLAST of Cucsa.218750 vs. NCBI nr
Match: gi|296084629|emb|CBI25717.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 137.5 bits (345), Expect = 8.7e-30 Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |