Cucsa.218680 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.218680
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionZinc finger-like protein
Locationscaffold01658 : 685342 .. 685949 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGAAGGAGGCAACAGTACATTTGCAACAGCTTTACTTAGTGAACACATAAGTTCACATCATCCCTTGCCAACTTTGCAACTTCCTGTCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGGTTACTTTTTCGGGAGTTTCAAATTTATAGAGCCATCATCAACATTGAACTTGTGGTTGACGAAATAATAAAACATTGGGTTAAAAAAGTAGATGAAGAGAATAGTACTTCTCAGGTGTTTGAAGAGATTTATCCTCTCGAAATTACGATAGAGTTGTTGGTTTATCAAATGATTCATGCAATAGACCAACCACATGAAATTATGATGGATCAACCACAAGTGATGATGGTTCCAACAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAAAGTGGAAAACGAAGAAATAGTGAAATTTGGCGACAACAAAAGCATTAATTGTGTTATCTGTTTGGAAGAGATTAGTAAAGAGAAGAAAGGAAGTGAGGCAGTGGTGTTACAGATGCCATGCTTGCATATGTTTCATGAAGAATGCATAAGGAAGTGGTTGAAGAGAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAACAATTGA

mRNA sequence

GTGAAGGAGGCAACAGTACATTTGCAACAGCTTTACTTAGTGAACACATAAGTTCACATCATCCCTTGCCAACTTTGCAACTTCCTGTCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGGTTACTTTTTCGGGAGTTTCAAATTTATAGAGCCATCATCAACATTGAACTTGTGGTTGACGAAATAATAAAACATTGGGTTAAAAAAGTAGATGAAGAGAATAGTACTTCTCAGGTGTTTGAAGAGATTTATCCTCTCGAAATTACGATAGAGTTGTTGGTTTATCAAATGATTCATGCAATAGACCAACCACATGAAATTATGATGGATCAACCACAAGTGATGATGGTTCCAACAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAAAGTGGAAAACGAAGAAATAGTGAAATTTGGCGACAACAAAAGCATTAATTGTGTTATCTGTTTGGAAGAGATTAGTAAAGAGAAGAAAGGAAGTGAGGCAGTGGTGTTACAGATGCCATGCTTGCATATGTTTCATGAAGAATGCATAAGGAAGTGGTTGAAGAGAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAACAATTGA

Coding sequence (CDS)

GTGAAGGAGGCAACAGTACATTTGCAACAGCTTTACTTAGTGAACACATAAGTTCACATCATCCCTTGCCAACTTTGCAACTTCCTGTCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGGTTACTTTTTCGGGAGTTTCAAATTTATAGAGCCATCATCAACATTGAACTTGTGGTTGACGAAATAATAAAACATTGGGTTAAAAAAGTAGATGAAGAGAATAGTACTTCTCAGGTGTTTGAAGAGATTTATCCTCTCGAAATTACGATAGAGTTGTTGGTTTATCAAATGATTCATGCAATAGACCAACCACATGAAATTATGATGGATCAACCACAAGTGATGATGGTTCCAACAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAAAGTGGAAAACGAAGAAATAGTGAAATTTGGCGACAACAAAAGCATTAATTGTGTTATCTGTTTGGAAGAGATTAGTAAAGAGAAGAAAGGAAGTGAGGCAGTGGTGTTACAGATGCCATGCTTGCATATGTTTCATGAAGAATGCATAAGGAAGTGGTTGAAGAGAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAACAATTGA

Protein sequence

EGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN*
Homology
[Close]
BLAST of Cucsa.218680 vs. Swiss-Prot
Match: HRD1_CAEBR (E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae GN=sel-11 PE=3 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 3.3e-08
Identity = 32/99 (32.32%), Postives = 50/99 (50.51%), Query Frame = 1 

Query: 96  YQMIHAIDQPHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEI 155
           YQ + A+   H+  +D   V++   + +AM S    V N+E+          C+IC EE+
Sbjct: 250 YQSVRAL---HKAFLD---VILSRRAINAMNSQFPVVSNDELSAM----DATCIICREEM 309

Query: 156 SKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCR 195
           + E         ++PC H+FH  C+R W +R   CPTCR
Sbjct: 310 TVESSPK-----RLPCSHVFHAHCLRSWFQRQQTCPTCR 333

[Close]
BLAST of Cucsa.218680 vs. Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.3e-08
Identity = 27/93 (29.03%), Postives = 49/93 (52.69%), Query Frame = 1 

Query: 109 MMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQ 168
           ++D    +  P +++ +ES+ + V             + C +CL E  +E+      V++
Sbjct: 55  LVDWEHHLPPPAAKAVVESLPRTVIRSS------KAELKCPVCLLEFEEEE-----TVIE 114

Query: 169 MPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 202
           MPC H+FH  CI  WL +++ CP CR  +PT++
Sbjct: 115 MPCHHLFHSNCILPWLSKTNSCPLCRHELPTDD 136

[Close]
BLAST of Cucsa.218680 vs. Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.3e-08
Identity = 27/93 (29.03%), Postives = 49/93 (52.69%), Query Frame = 1 

Query: 109 MMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQ 168
           ++D    +  P +++ +ES+ + V +           + C +CL E   E+      V++
Sbjct: 55  LVDWEHHLPPPAAKAVVESLPRTVISSA------KADLKCPVCLLEFEAEE-----TVIE 114

Query: 169 MPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 202
           MPC H+FH  CI  WL +++ CP CR  +PT++
Sbjct: 115 MPCHHLFHSNCILPWLSKTNSCPLCRHELPTDD 136

[Close]
BLAST of Cucsa.218680 vs. Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.5e-08
Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 1 

Query: 119 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 178
           P S+SA+ES+ +     EI         NC +C E        +E    +MPC H+FH++
Sbjct: 174 PASKSAIESLPRV----EISDCHIGSEANCAVCTEIFE-----TETEAREMPCKHLFHDD 233

Query: 179 CIRKWLKRSHYCPTCRFSMPT 200
           CI  WL   + CP CRF +P+
Sbjct: 234 CIVPWLSIRNSCPVCRFELPS 245

[Close]
BLAST of Cucsa.218680 vs. Swiss-Prot
Match: RN181_DROME (E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster GN=CG7694 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 28/86 (32.56%), Postives = 48/86 (55.81%), Query Frame = 1 

Query: 116 MMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMF 175
           M +   E++  ++L+ +   EIVK  +   + C +C E   + +K        +PC H F
Sbjct: 39  MEIEVPEASKRAILE-LPVHEIVKSDEGGDLECSVCKEPAEEGQK-----YRILPCKHEF 98

Query: 176 HEECIRKWLKRSHYCPTCRFSMPTNN 202
           HEECI  WLK+++ CP CR+ + T++
Sbjct: 99  HEECILLWLKKTNSCPLCRYELETDD 118

[Close]
BLAST of Cucsa.218680 vs. TrEMBL
Match: A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 8.4e-112
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

Query: 1   EGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVV 60
           EGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVV
Sbjct: 67  EGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVV 126

Query: 61  DEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPT 120
           DEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPT
Sbjct: 127 DEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPT 186

Query: 121 SESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECI 180
           SESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECI
Sbjct: 187 SESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECI 246

Query: 181 RKWLKRSHYCPTCRFSMPTNN 202
           RKWLKRSHYCPTCRFSMPTNN
Sbjct: 247 RKWLKRSHYCPTCRFSMPTNN 267

[Close]
BLAST of Cucsa.218680 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.7e-83
Identity = 155/199 (77.89%), Postives = 176/199 (88.44%), Query Frame = 1 

Query: 4   NSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEI 63
           ++TFAT  LSEHI +H P P LQLPVSIFKHGDKTLKRLLF++FQ++RAIINIELV D+I
Sbjct: 57  DTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELVTDQI 116

Query: 64  IKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSE 123
           IKHWVKKV D++ + S VFEEIYPLEITIE+LV QMI A+DQP E + DQPQV MVPTS+
Sbjct: 117 IKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETI-DQPQVRMVPTSD 176

Query: 124 SAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRK 183
           SAM+SMLK+VENEEI+K GD KSI+CVICLE+ISKE+KGSE VVLQMPCLHMFHEECIRK
Sbjct: 177 SAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRK 236

Query: 184 WLKRSHYCPTCRFSMPTNN 202
           WLK SHYCPTCRFSM  NN
Sbjct: 237 WLKTSHYCPTCRFSMTINN 254

[Close]
BLAST of Cucsa.218680 vs. TrEMBL
Match: A0A0A0K493_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067540 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.0e-81
Identity = 150/197 (76.14%), Postives = 171/197 (86.80%), Query Frame = 1 

Query: 6   TFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEIIK 65
           TFA+ L+ EHI SHHP PT QLPVS+F+HG++TLKRLLF++FQI+R IINI+LV DEII+
Sbjct: 69  TFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQLVADEIIE 128

Query: 66  HWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSESA 125
           HWVKK  D EN++  + EEIYPLEITIELL+ +MIHAIDQP E + DQPQV MVP SESA
Sbjct: 129 HWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETI-DQPQVTMVPASESA 188

Query: 126 MESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWL 185
           MESMLK+VE EEIVK G++KSINCVICLEEISK+ KGSE VVLQMPCLHMFHEECIR WL
Sbjct: 189 MESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEECIRTWL 248

Query: 186 KRSHYCPTCRFSMPTNN 202
           K SHYCPTCRFSMP NN
Sbjct: 249 KTSHYCPTCRFSMPINN 264

[Close]
BLAST of Cucsa.218680 vs. TrEMBL
Match: E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 4.1e-74
Identity = 142/205 (69.27%), Postives = 171/205 (83.41%), Query Frame = 1 

Query: 1   EGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVV 60
           EGGN   +T L+ EHI S H   T QLP+SIFKHGDKTLKR+LFREF++Y  IINIEL+ 
Sbjct: 65  EGGNG-HSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIELLA 124

Query: 61  DEIIKHWVKKV----DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVM 120
           +EIIKHWV+KV    D+EN+++ +F++IYPLEI I LLV +MI A+ QP   M+DQP  +
Sbjct: 125 NEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMIDQP--L 184

Query: 121 MVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFH 180
           MVPTS+SA+ESMLK+VENEEI+K GD++SINCV+CLEEISKE+KGSE  VLQMPCLHMFH
Sbjct: 185 MVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFH 244

Query: 181 EECIRKWLKRSHYCPTCRFSMPTNN 202
           EECIRKWLK SHYCPTCRFSMP +N
Sbjct: 245 EECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]
BLAST of Cucsa.218680 vs. TrEMBL
Match: E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-70
Identity = 142/200 (71.00%), Postives = 167/200 (83.50%), Query Frame = 1 

Query: 5   STFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEII 64
           STFAT LLSEHI S    P LQLP+SIFK GDKTLKRLLF++FQ++R I+N+ELVVDEII
Sbjct: 69  STFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNVELVVDEII 128

Query: 65  KHWVKKVDEEN-STSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ-VMMVPTSE 124
           KHW++KV+E+  + S+VF EIYPLEI IELLV +MI AI       +DQPQ VMMVPTS+
Sbjct: 129 KHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAI-------IDQPQEVMMVPTSD 188

Query: 125 SAMESMLKKVE-NEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIR 184
           +AMESMLK+VE NEE++K GD+ SI+CVICLE+I KE+K S  VVLQMPCLHMFHEECIR
Sbjct: 189 NAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIR 248

Query: 185 KWLKRSHYCPTCRFSMPTNN 202
           KWLK SH+CPTCRFSMP NN
Sbjct: 249 KWLKTSHFCPTCRFSMPINN 260

[Close]
BLAST of Cucsa.218680 vs. TAIR10
Match: AT1G14200.1 (AT1G14200.1 RING/U-box superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 4.4e-11
Identity = 41/127 (32.28%), Postives = 60/127 (47.24%), Query Frame = 1 

Query: 72  DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSESAMESMLKK 131
           D++ ST Q      PL        + MI +     +   D  +    P  +S +E+M + 
Sbjct: 42  DDQGSTDQTTRRGDPLSPR-----FVMIGSRSGLDDFFSDGGKQGRSPALKSEVENMPRV 101

Query: 132 VENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCP 191
           V  E+  K+G +    C ICL+E SK       V  +MPC H FH +C+ +WL R   CP
Sbjct: 102 VIGEDKEKYGGS----CAICLDEWSKGD-----VAAEMPCKHKFHSKCVEEWLGRHATCP 154

Query: 192 TCRFSMP 199
            CR+ MP
Sbjct: 162 MCRYEMP 154

[Close]
BLAST of Cucsa.218680 vs. TAIR10
Match: AT1G18770.1 (AT1G18770.1 RING/U-box superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 3.7e-10
Identity = 28/80 (35.00%), Postives = 46/80 (57.50%), Query Frame = 1 

Query: 119 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 178
           P S+  ++S+ +K+        G+     C+ICLEE S+ ++     V+ +PC H F +E
Sbjct: 34  PASKLVVKSLARKIYKMTTSSTGEM----CIICLEEFSEGRR-----VVTLPCGHDFDDE 93

Query: 179 CIRKWLKRSHYCPTCRFSMP 199
           C+ KW + +H CP CRF +P
Sbjct: 94  CVLKWFETNHSCPLCRFKLP 104

[Close]
BLAST of Cucsa.218680 vs. TAIR10
Match: AT5G37250.1 (AT5G37250.1 RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 28/93 (30.11%), Postives = 45/93 (48.39%), Query Frame = 1 

Query: 102 IDQPHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKG 161
           ++   ++M     V    T +  +E      +  E+   GD +   C ICLE+ S+    
Sbjct: 96  VEVTRDVMFSSIAVRSTDTFQRLLEE-----QTMELTDLGDEEETTCSICLEDFSESH-- 155

Query: 162 SEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCR 195
            + ++L   C H+FH+ CI +WLKR   CP CR
Sbjct: 156 DDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCR 181

[Close]
BLAST of Cucsa.218680 vs. TAIR10
Match: AT5G59550.1 (AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 58.5 bits (140), Expect = 5.4e-09
Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 1 

Query: 119 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 178
           P S+SA+ES+ +     EI         NC +C E        +E    +MPC H+FH++
Sbjct: 174 PASKSAIESLPRV----EISDCHIGSEANCAVCTEIFE-----TETEAREMPCKHLFHDD 233

Query: 179 CIRKWLKRSHYCPTCRFSMPT 200
           CI  WL   + CP CRF +P+
Sbjct: 234 CIVPWLSIRNSCPVCRFELPS 245

[Close]
BLAST of Cucsa.218680 vs. TAIR10
Match: AT1G26800.1 (AT1G26800.1 RING/U-box superfamily protein)

HSP 1 Score: 57.8 bits (138), Expect = 9.2e-09
Identity = 27/53 (50.94%), Postives = 30/53 (56.60%), Query Frame = 1 

Query: 148 CVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTN 201
           CVICLEE       SE  V +MPC H FH  CI KWL     CP CR+ MP +
Sbjct: 113 CVICLEEWK-----SEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]
BLAST of Cucsa.218680 vs. NCBI nr
Match: gi|700188568|gb|KGN43801.1| (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 1.2e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

Query: 1   EGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVV 60
           EGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVV
Sbjct: 67  EGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVV 126

Query: 61  DEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPT 120
           DEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPT
Sbjct: 127 DEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPT 186

Query: 121 SESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECI 180
           SESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECI
Sbjct: 187 SESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECI 246

Query: 181 RKWLKRSHYCPTCRFSMPTNN 202
           RKWLKRSHYCPTCRFSMPTNN
Sbjct: 247 RKWLKRSHYCPTCRFSMPTNN 267

[Close]
BLAST of Cucsa.218680 vs. NCBI nr
Match: gi|700188567|gb|KGN43800.1| (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 315.8 bits (808), Expect = 5.3e-83
Identity = 155/199 (77.89%), Postives = 176/199 (88.44%), Query Frame = 1 

Query: 4   NSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEI 63
           ++TFAT  LSEHI +H P P LQLPVSIFKHGDKTLKRLLF++FQ++RAIINIELV D+I
Sbjct: 57  DTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIELVTDQI 116

Query: 64  IKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSE 123
           IKHWVKKV D++ + S VFEEIYPLEITIE+LV QMI A+DQP E + DQPQV MVPTS+
Sbjct: 117 IKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETI-DQPQVRMVPTSD 176

Query: 124 SAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRK 183
           SAM+SMLK+VENEEI+K GD KSI+CVICLE+ISKE+KGSE VVLQMPCLHMFHEECIRK
Sbjct: 177 SAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFHEECIRK 236

Query: 184 WLKRSHYCPTCRFSMPTNN 202
           WLK SHYCPTCRFSM  NN
Sbjct: 237 WLKTSHYCPTCRFSMTINN 254

[Close]
BLAST of Cucsa.218680 vs. NCBI nr
Match: gi|778730182|ref|XP_011659721.1| (PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 2.9e-81
Identity = 150/197 (76.14%), Postives = 171/197 (86.80%), Query Frame = 1 

Query: 6   TFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEIIK 65
           TFA+ L+ EHI SHHP PT QLPVS+F+HG++TLKRLLF++FQI+R IINI+LV DEII+
Sbjct: 69  TFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQLVADEIIE 128

Query: 66  HWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSESA 125
           HWVKK  D EN++  + EEIYPLEITIELL+ +MIHAIDQP E + DQPQV MVP SESA
Sbjct: 129 HWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETI-DQPQVTMVPASESA 188

Query: 126 MESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWL 185
           MESMLK+VE EEIVK G++KSINCVICLEEISK+ KGSE VVLQMPCLHMFHEECIR WL
Sbjct: 189 MESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEECIRTWL 248

Query: 186 KRSHYCPTCRFSMPTNN 202
           K SHYCPTCRFSMP NN
Sbjct: 249 KTSHYCPTCRFSMPINN 264

[Close]
BLAST of Cucsa.218680 vs. NCBI nr
Match: gi|659111003|ref|XP_008455525.1| (PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo])

HSP 1 Score: 285.8 bits (730), Expect = 5.9e-74
Identity = 142/205 (69.27%), Postives = 171/205 (83.41%), Query Frame = 1 

Query: 1   EGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVV 60
           EGGN   +T L+ EHI S H   T QLP+SIFKHGDKTLKR+LFREF++Y  IINIEL+ 
Sbjct: 65  EGGNG-HSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIINIELLA 124

Query: 61  DEIIKHWVKKV----DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVM 120
           +EIIKHWV+KV    D+EN+++ +F++IYPLEI I LLV +MI A+ QP   M+DQP  +
Sbjct: 125 NEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMIDQP--L 184

Query: 121 MVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFH 180
           MVPTS+SA+ESMLK+VENEEI+K GD++SINCV+CLEEISKE+KGSE  VLQMPCLHMFH
Sbjct: 185 MVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCLHMFH 244

Query: 181 EECIRKWLKRSHYCPTCRFSMPTNN 202
           EECIRKWLK SHYCPTCRFSMP +N
Sbjct: 245 EECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]
BLAST of Cucsa.218680 vs. NCBI nr
Match: gi|659111005|ref|XP_008455526.1| (PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 1.8e-70
Identity = 142/200 (71.00%), Postives = 167/200 (83.50%), Query Frame = 1 

Query: 5   STFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEII 64
           STFAT LLSEHI S    P LQLP+SIFK GDKTLKRLLF++FQ++R I+N+ELVVDEII
Sbjct: 69  STFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNVELVVDEII 128

Query: 65  KHWVKKVDEEN-STSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ-VMMVPTSE 124
           KHW++KV+E+  + S+VF EIYPLEI IELLV +MI AI       +DQPQ VMMVPTS+
Sbjct: 129 KHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAI-------IDQPQEVMMVPTSD 188

Query: 125 SAMESMLKKVE-NEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIR 184
           +AMESMLK+VE NEE++K GD+ SI+CVICLE+I KE+K S  VVLQMPCLHMFHEECIR
Sbjct: 189 NAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMPCLHMFHEECIR 248

Query: 185 KWLKRSHYCPTCRFSMPTNN 202
           KWLK SH+CPTCRFSMP NN
Sbjct: 249 KWLKTSHFCPTCRFSMPINN 260

The following BLAST results are available for this feature:
BLAST of Cucsa.218680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HRD1_CAEBR3.3e-0832.32E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae GN=sel-11 PE=3 SV=2[more]
RN181_RAT4.3e-0829.03E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1[more]
RN181_MOUSE7.3e-0829.03E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1[more]
RDUF2_ARATH9.5e-0835.80E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1[more]
RN181_DROME1.2e-0732.56E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster GN=CG7694 ... [more]
BLAST of Cucsa.218680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7L0_CUCSA8.4e-112100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1[more]
A0A0A0K2A1_CUCSA3.7e-8377.89Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1[more]
A0A0A0K493_CUCSA2.0e-8176.14Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067540 PE=4 SV=1[more]
E5GCQ3_CUCME4.1e-7469.27Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E5GCQ4_CUCME1.2e-7071.00Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of Cucsa.218680 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14200.14.4e-1132.28 RING/U-box superfamily protein[more]
AT1G18770.13.7e-1035.00 RING/U-box superfamily protein[more]
AT5G37250.11.1e-0930.11 RING/U-box superfamily protein[more]
AT5G59550.15.4e-0935.80 zinc finger (C3HC4-type RING finger) family protein[more]
AT1G26800.19.2e-0950.94 RING/U-box superfamily protein[more]
BLAST of Cucsa.218680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188568|gb|KGN43801.1|1.2e-111100.00hypothetical protein Csa_7G067560 [Cucumis sativus][more]
gi|700188567|gb|KGN43800.1|5.3e-8377.89hypothetical protein Csa_7G067550 [Cucumis sativus][more]
gi|778730182|ref|XP_011659721.1|2.9e-8176.14PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus][more]
gi|659111003|ref|XP_008455525.1|5.9e-7469.27PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo][more]
gi|659111005|ref|XP_008455526.1|1.8e-7071.00PREDICTED: uncharacterized protein LOC103495678 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.218680.1Cucsa.218680.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 147..194
score: 6.8
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 148..193
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 148..194
score: 13
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 147..194
score: 0.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 144..195
score: 6.3
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 81..201
score: 1.7
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 131..198
score: 7.57

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.218680Cucumber (Chinese Long) v3cgycucB342
Cucsa.218680Watermelon (97103) v2cgywmbB393
Cucsa.218680Watermelon (97103) v2cgywmbB395
Cucsa.218680Watermelon (97103) v2cgywmbB399
Cucsa.218680Wax gourdcgywgoB443
Cucsa.218680Wax gourdcgywgoB445
Cucsa.218680Wax gourdcgywgoB450
Cucsa.218680Cucumber (Gy14) v1cgycgyB119
Cucsa.218680Cucurbita maxima (Rimu)cgycmaB0620
Cucsa.218680Cucurbita maxima (Rimu)cgycmaB0622
Cucsa.218680Cucurbita maxima (Rimu)cgycmaB0624
Cucsa.218680Cucurbita maxima (Rimu)cgycmaB0627
Cucsa.218680Cucurbita maxima (Rimu)cgycmaB0629
Cucsa.218680Cucurbita moschata (Rifu)cgycmoB0623
Cucsa.218680Cucurbita moschata (Rifu)cgycmoB0624
Cucsa.218680Cucurbita moschata (Rifu)cgycmoB0627
Cucsa.218680Cucurbita moschata (Rifu)cgycmoB0629
Cucsa.218680Cucurbita moschata (Rifu)cgycmoB0632
Cucsa.218680Wild cucumber (PI 183967)cgycpiB335
Cucsa.218680Wild cucumber (PI 183967)cgycpiB336
Cucsa.218680Cucumber (Chinese Long) v2cgycuB322
Cucsa.218680Melon (DHL92) v3.5.1cgymeB379
Cucsa.218680Melon (DHL92) v3.5.1cgymeB380
Cucsa.218680Melon (DHL92) v3.5.1cgymeB383
Cucsa.218680Watermelon (Charleston Gray)cgywcgB391
Cucsa.218680Watermelon (Charleston Gray)cgywcgB393
Cucsa.218680Watermelon (Charleston Gray)cgywcgB396
Cucsa.218680Watermelon (Charleston Gray)cgywcgB399
Cucsa.218680Watermelon (97103) v1cgywmB415
Cucsa.218680Watermelon (97103) v1cgywmB421
Cucsa.218680Watermelon (97103) v1cgywmB422
Cucsa.218680Cucurbita pepo (Zucchini)cgycpeB0594
Cucsa.218680Cucurbita pepo (Zucchini)cgycpeB0596
Cucsa.218680Cucurbita pepo (Zucchini)cgycpeB0599
Cucsa.218680Cucurbita pepo (Zucchini)cgycpeB0601
Cucsa.218680Cucurbita pepo (Zucchini)cgycpeB0602
Cucsa.218680Bottle gourd (USVL1VR-Ls)cgylsiB364
Cucsa.218680Bottle gourd (USVL1VR-Ls)cgylsiB366
Cucsa.218680Bottle gourd (USVL1VR-Ls)cgylsiB367
Cucsa.218680Melon (DHL92) v3.6.1cgymedB377
Cucsa.218680Melon (DHL92) v3.6.1cgymedB381
Cucsa.218680Silver-seed gourdcarcgyB0221
Cucsa.218680Silver-seed gourdcarcgyB0338
Cucsa.218680Silver-seed gourdcarcgyB0435
Cucsa.218680Silver-seed gourdcarcgyB0524
Cucsa.218680Silver-seed gourdcarcgyB0824
Cucsa.218680Silver-seed gourdcarcgyB0825