Cucsa.218510 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATGGCAACCCACCAAACAAAATTTTCAATACTATCAAATATCAACTAAATTAGCTCACATAAAAATGACGATTGGTATTGGTGGAGGAATTGGTATTGGCATTGGCGTTCCTGGTATCAAAGTATCGATCGGTGGAGGCATCGGTATCGGAAGTAGAAAGGGGGGgTGCAAGAGTCATGATCCTTCAAAAAAATGGAGTCAAGTTCCCAATGCGCAAGCAGATCAAGTTATTATAAATGTTGCTAACTTTGCAGTGGCAGCGTTCAACCAAAAATATGGAAATAAGCTTGTGTTTCATGCAGTTTTGGAAGCTTGGGTTGTTGTTCTTCCTGATGGCAAAAAAGAGTATAGTATTGAATTAGTAGCAAAAGACTGTTTGAATCGTTGCCTCTACTTTCATGCTATTGTGATTGAAATAGTTGGCGTTCCCCCTGGCTGGAATCTTTTTTCTTTCACCCAAATCAGCGACTAAATTAAAAGAAAAGTTATATGTATAATCGAAGTTCATACTTATGTGTGAGAAGTACACAATAATAAATCTTATATGATATTGTACTGCTCTACTTTCTTTAACTATCTGTTATAGAATAATAATGGAGGCCAAACGATGTTTTTAGTCCCAAACCC ATGCAATGGCAACCCACCAAACAAAATTTTCAATACTATCAAATATCAACTAAATTAGCTCACATAAAAATGACGATTGGTATTGGTGGAGGAATTGGTATTGGCATTGGCGTTCCTGGTATCAAAGTATCGATCGGTGGAGGCATCGGTATCGGAAGTAGAAAGGGGGGGTGCAAGAGTCATGATCCTTCAAAAAAATGGAGTCAAGTTCCCAATGCGCAAGCAGATCAAGTTATTATAAATGTTGCTAACTTTGCAGTGGCAGCGTTCAACCAAAAATATGGAAATAAGCTTGTGTTTCATGCAGTTTTGGAAGCTTGGGTTGTTGTTCTTCCTGATGGCAAAAAAGAGTATAGTATTGAATTAGTAGCAAAAGACTGTTTGAATCGTTGCCTCTACTTTCATGCTATTGTGATTGAAATAGTTGGCGTTCCCCCTGGCTGGAATCTTTTTTCTTTCACCCAAATCAGCGACTAAATTAAAAGAAAAGTTATATGTATAATCGAAGTTCATACTTATGTGTGAGAAGTACACAATAATAAATCTTATATGATATTGTACTGCTCTACTTTCTTTAACTATCTGTTATAGAATAATAATGGAGGCCAAACGATGTTTTTAGTCCCAAACCC ATGCAATGGCAACCCACCAAACAAAATTTTCAATACTATCAAATATCAACTAAATTAGCTCACATAAAAATGACGATTGGTATTGGTGGAGGAATTGGTATTGGCATTGGCGTTCCTGGTATCAAAGTATCGATCGGTGGAGGCATCGGTATCGGAAGTAGAAAGGGGGGgTGCAAGAGTCATGATCCTTCAAAAAAATGGAGTCAAGTTCCCAATGCGCAAGCAGATCAAGTTATTATAAATGTTGCTAACTTTGCAGTGGCAGCGTTCAACCAAAAATATGGAAATAAGCTTGTGTTTCATGCAGTTTTGGAAGCTTGGGTTGTTGTTCTTCCTGATGGCAAAAAAGAGTATAGTATTGAATTAGTAGCAAAAGACTGTTTGAATCGTTGCCTCTACTTTCATGCTATTGTGATTGAAATAGTTGGCGTTCCCCCTGGCTGGAATCTTTTTTCTTTCACCCAAATCAGCGACTAA MQWQPTKQNFQYYQISTKLAHIKMTIGIGGGIGIGIGVPGIKVSIGGGIGIGSRKGGCKSHDPSKKWSQVPNAQADQVIINVANFAVAAFNQKYGNKLVFHAVLEAWVVVLPDGKKEYSIELVAKDCLNRCLYFHAIVIEIVGVPPGWNLFSFTQISD*
BLAST of Cucsa.218510 vs. TrEMBL
Match: A0A0A0K477_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067390 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 5.6e-87 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1
BLAST of Cucsa.218510 vs. TrEMBL
Match: E5GCR5_CUCME (Phloem filament protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 9.4e-50 Identity = 96/133 (72.18%), Postives = 109/133 (81.95%), Query Frame = 1
BLAST of Cucsa.218510 vs. TrEMBL
Match: E5GCR6_CUCME (Phloem filament protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.1e-34 Identity = 83/136 (61.03%), Postives = 97/136 (71.32%), Query Frame = 1
BLAST of Cucsa.218510 vs. TrEMBL
Match: A0A0A0K281_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067350 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 6.8e-32 Identity = 78/137 (56.93%), Postives = 96/137 (70.07%), Query Frame = 1
BLAST of Cucsa.218510 vs. TrEMBL
Match: A0A0A0K660_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_7G067370 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.6e-28 Identity = 76/134 (56.72%), Postives = 86/134 (64.18%), Query Frame = 1
BLAST of Cucsa.218510 vs. NCBI nr
Match: gi|778724618|ref|XP_011658840.1| (PREDICTED: uncharacterized protein LOC105436098 [Cucumis sativus]) HSP 1 Score: 328.2 bits (840), Expect = 8.1e-87 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1
BLAST of Cucsa.218510 vs. NCBI nr
Match: gi|659110227|ref|XP_008455116.1| (PREDICTED: uncharacterized protein LOC103495368 [Cucumis melo]) HSP 1 Score: 224.2 bits (570), Expect = 1.6e-55 Identity = 109/158 (68.99%), Postives = 123/158 (77.85%), Query Frame = 1
BLAST of Cucsa.218510 vs. NCBI nr
Match: gi|307136458|gb|ADN34263.1| (phloem filament protein [Cucumis melo subsp. melo]) HSP 1 Score: 204.5 bits (519), Expect = 1.4e-49 Identity = 96/133 (72.18%), Postives = 109/133 (81.95%), Query Frame = 1
BLAST of Cucsa.218510 vs. NCBI nr
Match: gi|307136459|gb|ADN34264.1| (phloem filament protein [Cucumis melo subsp. melo]) HSP 1 Score: 154.5 bits (389), Expect = 1.6e-34 Identity = 83/136 (61.03%), Postives = 97/136 (71.32%), Query Frame = 1
BLAST of Cucsa.218510 vs. NCBI nr
Match: gi|778724610|ref|XP_011658838.1| (PREDICTED: uncharacterized protein LOC105436096 [Cucumis sativus]) HSP 1 Score: 145.2 bits (365), Expect = 9.7e-32 Identity = 78/137 (56.93%), Postives = 96/137 (70.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |