Cucsa.213690 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCAGTATTTATTTATAAACTCTCCCGGTGGATCGGTAATACCCGGAGTAGGTCTTTTTGATACTATGCAATTTGTGTCACCAGATGTCCATACAATATGTATTGGATTAGCCGCTTCAATGGGATCTTTTATTCTAGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCCTCACGCTCGGCTACATTTCTTTTATTTTATTTTGGTGAATTTATAA ATCAGTATTTATTTATAAACTCTCCCGGTGGATCGGTAATACCCGGAGTAGGTCTTTTTGATACTATGCAATTTGTGTCACCAGATGTCCATACAATATGTATTGGATTAGCCGCTTCAATGGGATCTTTTATTCTAGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCCTCACGCTCGGCTACATTTCTTTTATTTTATTTTGGTGAATTTATAA ATCAGTATTTATTTATAAACTCTCCCGGTGGATCGGTAATACCCGGAGTAGGTCTTTTTGATACTATGCAATTTGTGTCACCAGATGTCCATACAATATGTATTGGATTAGCCGCTTCAATGGGATCTTTTATTCTAGTCGGAGGAGAAATTACCAAACGTCTAGCATTCCCTCACGCTCGGCTACATTTCTTTTATTTTATTTTGGTGAATTTATAA QYLFINSPGGSVIPGVGLFDTMQFVSPDVHTICIGLAASMGSFILVGGEITKRLAFPHARLHFFYFILVNL*
BLAST of Cucsa.213690 vs. Swiss-Prot
Match: CLPP_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=clpP PE=3 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 3.9e-28 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.213690 vs. Swiss-Prot
Match: CLPP_CALFG (ATP-dependent Clp protease proteolytic subunit OS=Calycanthus floridus var. glaucus GN=clpP PE=3 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 5.2e-25 Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 1
BLAST of Cucsa.213690 vs. Swiss-Prot
Match: CLPP_ACOGR (ATP-dependent Clp protease proteolytic subunit OS=Acorus gramineus GN=clpP PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 6.8e-25 Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 1
BLAST of Cucsa.213690 vs. Swiss-Prot
Match: CLPP_ACOCL (ATP-dependent Clp protease proteolytic subunit OS=Acorus calamus GN=clpP PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 6.8e-25 Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 1
BLAST of Cucsa.213690 vs. Swiss-Prot
Match: CLPP_TOBAC (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana tabacum GN=clpP PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.5e-24 Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 1
BLAST of Cucsa.213690 vs. TrEMBL
Match: W8E152_9ROSI (ATP-dependent Clp protease proteolytic subunit OS=Cucumis hystrix GN=clpP PE=3 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 4.3e-26 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.213690 vs. TrEMBL
Match: H2FD39_9ASPA (ATP-dependent Clp protease proteolytic subunit OS=Beaucarnea hookeri GN=clpP PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 2.0e-23 Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 1
BLAST of Cucsa.213690 vs. TrEMBL
Match: A0A0D3LZ42_9ASPA (ATP-dependent Clp protease proteolytic subunit OS=Cypripedium formosanum GN=clpP PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 2.6e-23 Identity = 53/61 (86.89%), Postives = 58/61 (95.08%), Query Frame = 1
BLAST of Cucsa.213690 vs. TrEMBL
Match: A0A161GBB7_9LILI (Clp protease proteolytic subunit (Fragment) OS=Campynema lineare GN=clpP PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 4.4e-23 Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 1
BLAST of Cucsa.213690 vs. TrEMBL
Match: U5LTP3_9LILI (ATP-dependent Clp protease proteolytic subunit OS=Veratrum patulum GN=clpP PE=3 SV=2) HSP 1 Score: 114.8 bits (286), Expect = 4.4e-23 Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 1
BLAST of Cucsa.213690 vs. TAIR10
Match: ATCG00670.1 (ATCG00670.1 plastid-encoded CLP P) HSP 1 Score: 98.6 bits (244), Expect = 1.7e-21 Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
BLAST of Cucsa.213690 vs. TAIR10
Match: AT1G02560.1 (AT1G02560.1 nuclear encoded CLP protease 5) HSP 1 Score: 74.7 bits (182), Expect = 2.6e-14 Identity = 31/59 (52.54%), Postives = 46/59 (77.97%), Query Frame = 1
BLAST of Cucsa.213690 vs. TAIR10
Match: AT1G66670.1 (AT1G66670.1 CLP protease proteolytic subunit 3) HSP 1 Score: 69.7 bits (169), Expect = 8.3e-13 Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 1
BLAST of Cucsa.213690 vs. TAIR10
Match: AT5G23140.1 (AT5G23140.1 nuclear-encoded CLP protease P7) HSP 1 Score: 60.5 bits (145), Expect = 5.0e-10 Identity = 25/58 (43.10%), Postives = 40/58 (68.97%), Query Frame = 1
BLAST of Cucsa.213690 vs. TAIR10
Match: AT5G45390.1 (AT5G45390.1 CLP protease P4) HSP 1 Score: 58.5 bits (140), Expect = 1.9e-09 Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 1
BLAST of Cucsa.213690 vs. NCBI nr
Match: gi|122202884|sp|Q2QD64.1|CLPP_CUCSA (RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp) HSP 1 Score: 124.8 bits (312), Expect = 6.2e-26 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.213690 vs. NCBI nr
Match: gi|590000439|ref|YP_009004068.1| (clp protease proteolytic subunit [Cucumis hystrix]) HSP 1 Score: 124.8 bits (312), Expect = 6.2e-26 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.213690 vs. NCBI nr
Match: gi|334903533|gb|AEH25783.1| (clpp protease [synthetic construct]) HSP 1 Score: 124.8 bits (312), Expect = 6.2e-26 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.213690 vs. NCBI nr
Match: gi|68164829|ref|YP_247625.1| (ATP-dependent Clp protease proteolytic subunit [Cucumis sativus]) HSP 1 Score: 123.6 bits (309), Expect = 1.4e-25 Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 1
BLAST of Cucsa.213690 vs. NCBI nr
Match: gi|372485872|gb|AEX96572.1| (clp protease proteolytic subunit (chloroplast) [Beaucarnea hookeri]) HSP 1 Score: 115.9 bits (289), Expect = 2.9e-23 Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |