Cucsa.207550 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.207550
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionZinc finger MYM-type protein 1
Locationscaffold01443 : 364051 .. 365139 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAATGAAGCTATTGCTAAATCCTTCAATAATAATGAAGAAAAATACAAGGACATTTTCACCATAATTGATAAAAAATGGGAGCTTCAGTTGCATTTTCCTCTGCATGCAGCGGAGTATTATTTAAACCTATCATTCTATAATTCGAATCCTAACATCCAGGAGGATGATGAAATAGTTAATGGACTATACTCATGCATAACGAAAATGGTTGCTTCATTAGAAGTACAAGACAAAATACTTGCGGAACTAAACAAGTATAAAAGAGTTGAAGCATTATTCGGACAACCTTTAGCAATCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGTGAGAATTTTTAGGTCTTACTTGTAGTGCTTCTGATGCGAGCGTAATTGGAGTGTGTTTGAACAAGTTACGTTTCATTTCCTTAAGTACATTGAGAATGAGAATCAAAATTTGTTGATTCACTAACAATGTAACTTTCTAATTTTTCAGCTTCATAGCAAGAAACAAAATAGGCTTGCTCAAAGTCGTTTGAATAATCTAGTGTTCATCAAATACAACAGAGCATTAAAACGTCGATACAACCTACGAGATATTGTTGATTCCATCTCCTTGAAAAACATTGATGATAGTAACAAATGGTTGATTGGAAGATTGGATGACAATTCTGAGGAGGAGGATGAGTTGGTATTTGACGATGATTCTTTAACGTGGGGTGATGTTTCAAGAGCTGTCGGAACAAAAGAACCATCATTTTATTCTAGAGCAAAGACTAATGTTTCATGTTCATCCTCTTTTACCACGCAACGCAAACAAGTAAATTTGGATGACTTCGATTTGGAAGAAGAAGATACTGATTGGTATATGTGTAACAAAGGAGTAAAATGA

mRNA sequence

AGAATGAAGCTATTGCTAAATCCTTCAATAATAATGAAGAAAAATACAAGGACATTTTCACCATAATTGATAAAAAATGGGAGCTTCAGTTGCATTTTCCTCTGCATGCAGCGGAGTATTATTTAAACCTATCATTCTATAATTCGAATCCTAACATCCAGGAGGATGATGAAATAGTTAATGGACTATACTCATGCATAACGAAAATGGTTGCTTCATTAGAAGTACAAGACAAAATACTTGCGgaactaaacaagtataaaagacgtaattggagtgtgtttgaacaacttcatagcaagaaacaaaataggcttgctcaaagtcgtttgaataatctagtgttcatcaaatacaacagagcattaaaacgtcgatacaacctacgagatattgttgattccatctccttgaaaaacattgatgatagtaacaaatggttgattggaagattggatgacaattctgaggaggaggatgagttggtatttgacgatgattctttaacgtggggtgatgtttcaagagctgtcggaacaaaagaaccatcattttattctagagcaaagactaatgtttcatgttcatcctcttttaccacgcaacgcaaacaagtaaatttggatgacttcgatttggaagaagaagatactgattggtatatgtgtaacaaaggagtaaaatga

Coding sequence (CDS)

AGAATGAAGCTATTGCTAAATCCTTCAATAATAATGAAGAAAAATACAAGGACATTTTCACCATAATTGATAAAAAATGGGAGCTTCAGTTGCATTTTCCTCTGCATGCAGCGGAGTATTATTTAAACCTATCATTCTATAATTCGAATCCTAACATCCAGGAGGATGATGAAATAGTTAATGGACTATACTCATGCATAACGAAAATGGTTGCTTCATTAGAAGTACAAGACAAAATACTTGCGGAACTAAACAAGTATAAAAGACGTAATTGGAGTGTGTTTGAACAACTTCATAGCAAGAAACAAAATAGGCTTGCTCAAAGTCGTTTGAATAATCTAGTGTTCATCAAATACAACAGAGCATTAAAACGTCGATACAACCTACGAGATATTGTTGATTCCATCTCCTTGAAAAACATTGATGATAGTAACAAATGGTTGATTGGAAGATTGGATGACAATTCTGAGGAGGAGGATGAGTTGGTATTTGACGATGATTCTTTAACGTGGGGTGATGTTTCAAGAGCTGTCGGAACAAAAGAACCATCATTTTATTCTAGAGCAAAGACTAATGTTTCATGTTCATCCTCTTTTACCACGCAACGCAAACAAGTAAATTTGGATGACTTCGATTTGGAAGAAGAAGATACTGATTGGTATATGTGTAACAAAGGAGTAAAATGA

Protein sequence

NEAIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLNLSFYNSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELNKYKRRNWSVFEQLHSKKQNRLAQSRLNNLVFIKYNRALKRRYNLRDIVDSISLKNIDDSNKWLIGRLDDNSEEEDELVFDDDSLTWGDVSRAVGTKEPSFYSRAKTNVSCSSSFTTQRKQVNLDDFDLEEEDTDWYMCNKGVK*
Homology
[Close]
BLAST of Cucsa.207550 vs. TrEMBL
Match: A5BSH6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025296 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 9.0e-54
Identity = 117/266 (43.98%), Postives = 156/266 (58.65%), Query Frame = 1 

Query: 2   EAIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLNLSFYNSNPNIQEDDEIVNG 61
           + I +SFN NEEKYK+IF +IDK+WE+QLH PLHAA Y+LN  F+   P I+ D +I++ 
Sbjct: 323 DTIVRSFNGNEEKYKEIFNVIDKRWEIQLHRPLHAARYFLNPEFFYDKPEIEHDAKIMSD 382

Query: 62  LYSCITKMVASLEVQDKILAELNKYK-----------------------RRNWSVFEQLH 121
           LY CI ++      Q+K++AE   Y                        +RNWS+FE +H
Sbjct: 383 LYKCILRLTREPAKQEKVVAEWAVYGASAPNLQKLIMKVLNLTCSALGCKRNWSIFENIH 442

Query: 122 SKKQNRLAQSRLNNLVFIKYNRALKRRYNLRDIVDSISLKNIDDSNKWLIGRLDDNSEE- 181
           SK++NRL    LN+LV+IKYNRALKRRYN  + +D ISLK+I DSN+WLIGR+ D     
Sbjct: 443 SKRRNRLDHQHLNDLVYIKYNRALKRRYNECNTIDPISLKDIGDSNEWLIGRMKDEDSHG 502

Query: 182 --EDELVFDDDSLTWGDVSRAVGTKEPSFYSRAKTNVS----------CSSSFTTQRKQV 226
             +D+ VFDDD LTWGDV+RA G +E  F +RA+   S           SSS T     +
Sbjct: 503 GAQDDFVFDDDHLTWGDVARATGAEEARFDTRARAKASSSIIPPTRGIASSSRTLPSHSL 562

[Close]
BLAST of Cucsa.207550 vs. TrEMBL
Match: A5C1A1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008052 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.8e-52
Identity = 103/219 (47.03%), Postives = 142/219 (64.84%), Query Frame = 1 

Query: 2   EAIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLNLSFYNSNPNIQEDDEIVNG 61
           + I + FN NEEKYK++F IIDK+WE+QLH PLHA  Y+LN  F+   P I+ D EI++ 
Sbjct: 186 DTIVRIFNGNEEKYKEVFNIIDKRWEIQLHRPLHATWYFLNPKFFYDKPEIESDAEIMSD 245

Query: 62  LYSCITKMVASLEVQDKILAELNKYKR----------------------RNWSVFEQLHS 121
           LY CI ++      Q+K++AE++ Y                        RNWS+FE +HS
Sbjct: 246 LYKCILRLTRDPAKQEKVVAEVSLYTNAQGLFRNELDVKTMKVKTPGCERNWSIFENIHS 305

Query: 122 KKQNRLAQSRLNNLVFIKYNRALKRRYNLRDIVDSISLKNIDDSNKWLIGRLDDNSEE-- 181
           K++NRL   R N+LV+IKYN+ALKRRYN R+ +D ISLK+IDD N+WLIGR+ D      
Sbjct: 306 KRRNRLDHQRFNDLVYIKYNQALKRRYNERNTIDPISLKDIDDINEWLIGRMKDEDSHGG 365

Query: 182 -EDELVFDDDSLTWGDVSRAVGTKEPSFYSRAKTNVSCS 196
            +++ VFDDD+LTWGDV+RA G +E  F S+A+   + S
Sbjct: 366 AQNDFVFDDDNLTWGDVARATGAEEAKFDSKARARENSS 404

[Close]
BLAST of Cucsa.207550 vs. TrEMBL
Match: A5AEN2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030478 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 6.5e-52
Identity = 108/247 (43.72%), Postives = 152/247 (61.54%), Query Frame = 1 

Query: 2   EAIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLNLSFYNSNPNIQEDDEIVNG 61
           + +  SFN NEEKYK+IF IIDK+WE+QL+ PLHA  Y+LN  F+   P I+ + EI++ 
Sbjct: 249 DTVVTSFNGNEEKYKEIFNIIDKRWEIQLYRPLHAVGYFLNPEFFYDKPEIEXNAEIMSD 308

Query: 62  LYSCITKMVASLEVQDKILAELNKYKRR----------------------NWSVFEQLHS 121
           LY CI ++   L  Q+K++A+++ +                         NWS+F  +HS
Sbjct: 309 LYKCILRLTRDLAKQEKVVAKMSLFTNAQGLFGNELAVRTRKTRALGCEWNWSIFXNIHS 368

Query: 122 KKQNRLAQSRLNNLVFIKYNRALKRRYNLRDIVDSISLKNIDDSNKWLIGRLDDNSEE-- 181
           K++NRL   RLN+LV+IKYNRALKRRYN R+ +D ISLK+IDDSN+WLIGR++D      
Sbjct: 369 KRRNRLDHQRLNDLVYIKYNRALKRRYNERNTIDRISLKDIDDSNEWLIGRMEDEDSHGG 428

Query: 182 -EDELVFDDDSLTWGDVSRAVGTKEPSFYSRAKTNVSCSSSFTTQRKQV-----NLDDFD 219
            +D+ VFDDD+LTWGDV+ A   +E  F +RA+     SSS     +++      L    
Sbjct: 429 AQDDFVFDDDNLTWGDVAIATRAEEARFDTRARAKARPSSSIIPPTRRIASSSRTLPSHS 488

[Close]
BLAST of Cucsa.207550 vs. TrEMBL
Match: A5BQ63_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009577 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.1e-50
Identity = 113/246 (45.93%), Postives = 148/246 (60.16%), Query Frame = 1 

Query: 2   EAIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLNLSFYNSNPNIQEDDEIVNG 61
           + I +SFN NEEKYK+IF IIDK+ E+QLH PLHA  Y+LN  F+   P I  D EI+  
Sbjct: 418 DTIVRSFNGNEEKYKEIFNIIDKRXEIQLHRPLHAVGYFLNPEFFYDKPEIXHDAEIMTE 477

Query: 62  LYSCITKMVASLEVQDKILAELNKYK---RRNWSVFEQLHSKKQNRLAQSRLNNLVFIKY 121
            ++       +L+     +  L        RNWS+FE +HSK++NRL   RLN+LV+IKY
Sbjct: 478 WWAAYGASXPNLQKFAMKVLNLTCXASGCERNWSIFENIHSKRRNRLDHQRLNDLVYIKY 537

Query: 122 NRALKRRYNLRDIVDSISLKNIDDSNKWLIGRLDDNSEE---EDELVFDDDSLTWGDVSR 181
           NRALKRRYN R+ +D ISLK+IDDSN+WLIGR++D       +D  VFDDD+LTWGDV+R
Sbjct: 538 NRALKRRYNERNTIDPISLKDIDDSNEWLIGRMEDEDSHGGAQDNFVFDDDNLTWGDVAR 597

Query: 182 AVGTKEPSFYSRAKTNVS----------CSSSFTTQRKQVNLDDFD------LEEEDTDW 226
           A G +E  F +RA+   S           SSS T     +  +D D       +EED + 
Sbjct: 598 AAGAEEARFDTRARARASSSIIPPTRGIASSSRTLPSHSLIDEDEDGGMVDSADEEDGEG 657

[Close]
BLAST of Cucsa.207550 vs. TrEMBL
Match: A5ATT7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005541 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48
Identity = 100/197 (50.76%), Postives = 133/197 (67.51%), Query Frame = 1 

Query: 2   EAIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLNLSFYNSNPNIQEDDEIVNG 61
           + I  SFN NEEKYK+IF IIDK+WE+QLH PLHAA Y+LN  F+   P I+ D EI++ 
Sbjct: 205 DTIVXSFNGNEEKYKEIFNIIDKRWEIQLHRPLHAAGYFLNPEFFYDKPEIEHDVEIMSD 264

Query: 62  LYSCITKMVASLEVQDKILAELNKYKRRNWSVFEQLHSKKQNRLAQSRLNNLVFIKYNRA 121
           LY CI ++      Q+K++AE              +HSK++NRL   RLN+LV+IKYN+A
Sbjct: 265 LYKCILRLTRDPXKQEKVVAE--------------IHSKRRNRLDHQRLNDLVYIKYNQA 324

Query: 122 LKRRYNLRDIVDSISLKNIDDSNKWLIGRLDDNSEE---EDELVFDDDSLTWGDVSRAVG 181
           LKRRYN  + +  ISLK+IDDSN+WLIGR++D       +D+ VFDDD+LTWGDV+RA  
Sbjct: 325 LKRRYNEXNTIGPISLKDIDDSNEWLIGRMEDXDSHGGAQDDFVFDDDNLTWGDVARATR 384

Query: 182 TKEPSFYSRAKTNVSCS 196
            +E  F +RA+   S S
Sbjct: 385 AEEXXFDTRARARASSS 387

[Close]
BLAST of Cucsa.207550 vs. TAIR10
Match: AT5G33406.1 (AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related)

HSP 1 Score: 118.2 bits (295), Expect = 6.4e-27
Identity = 52/102 (50.98%), Postives = 73/102 (71.57%), Query Frame = 1 

Query: 89  RNWSVFEQLHSKKQNRLAQSRLNNLVFIKYNRALKRRYNLRDIVDSISLKNIDDSNKWLI 148
           RNW VF+ LH+K++NRL Q RLN+++F+KYNRAL+RRY   D  D I L  ID  N+WL 
Sbjct: 247 RNWGVFQLLHTKRRNRLTQCRLNDMIFVKYNRALQRRYKRNDTFDPILLNEIDQCNEWLT 306

Query: 149 GRLDDNSE--EEDELVFDDDSLTWGDVSRAVGTKEPSFYSRA 189
           GR+++NS   E D+LVF++D LTW +V  A G  +P + +R+
Sbjct: 307 GRMEENSSDTENDDLVFENDDLTWAEVGEAAGANDPYYATRS 348


HSP 2 Score: 89.4 bits (220), Expect = 3.2e-18
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1 

Query: 2   EAIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLNLSFYNSNPNIQEDDEIVNG 61
           E I KSF   EE YK  F IID++W++QLH PLHAA YYLN  F+   P+    +E++ G
Sbjct: 109 ETIMKSFTYKEENYKMAFEIIDRRWDIQLHRPLHAAGYYLNPEFHYGQPDDIGYEEVLGG 168

Query: 62  LYSCITKMVASLEVQDKILAELNKYKR 89
              C+ ++V  +E QDKI+ EL+ +K+
Sbjct: 169 FLGCLGRLVPKIETQDKIITELDAFKK 195

[Close]
BLAST of Cucsa.207550 vs. TAIR10
Match: AT3G13030.1 (AT3G13030.1 hAT transposon superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 3.4e-12
Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = 1 

Query: 2   EAIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLN-LSFYNSNPNIQEDDEIVN 61
           E+IA+ FN+  + YK ++ +ID  W   LH PLHAA Y+LN  +FY++N ++  D E+V 
Sbjct: 356 ESIAREFNHKPQFYKPLWDVIDDVWNKHLHNPLHAAGYFLNPTAFYSTNFHL--DIEVVT 415

Query: 62  GLYSCITKMVASLEVQDKILAELNKYK 88
           GL S +  MV    VQ KI  +++ Y+
Sbjct: 416 GLISSLIHMVEDCHVQFKISTQIDMYR 440

[Close]
BLAST of Cucsa.207550 vs. TAIR10
Match: AT3G13020.1 (AT3G13020.1 hAT transposon superfamily protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-08
Identity = 32/86 (37.21%), Postives = 54/86 (62.79%), Query Frame = 1 

Query: 3   AIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLN-LSFYNSNPNIQEDDEIVNG 62
           +I K FN+ ++ Y  ++ +ID  W   LH PLHAA YYLN  SFY+++ ++  D E+ +G
Sbjct: 431 SIKKEFNDEKKHYLTLWDVIDDVWNKHLHNPLHAAGYYLNPTSFYSTDFHL--DPEVSSG 490

Query: 63  LYSCITKMVASLEVQDKILAELNKYK 88
           L   +  +  + E Q KI ++L++Y+
Sbjct: 491 LTHSLVHV--AKEGQIKIASQLDRYR 512

[Close]
BLAST of Cucsa.207550 vs. TAIR10
Match: AT3G22220.1 (AT3G22220.1 hAT transposon superfamily)

HSP 1 Score: 48.5 bits (114), Expect = 6.3e-06
Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 1 

Query: 2   EAIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLNLSFYNSNPNIQED--DEIV 61
           EAI  +  + EE Y   + IID+ W   L  PL+AA +YLN  F+ S   I E+   EI 
Sbjct: 502 EAIKTNLAHREE-YIVYWKIIDRWW---LQQPLYAAGFYLNPKFFYS---IDEEMRSEIH 561

Query: 62  NGLYSCITKMVASLEVQDKILAELNKYK 88
             +  CI K+V  + +QD ++ ++N YK
Sbjct: 562 LAVVDCIEKLVPDVNIQDIVIKDINSYK 582


HSP 2 Score: 37.0 bits (84), Expect = 1.9e-02
Identity = 21/62 (33.87%), Postives = 35/62 (56.45%), Query Frame = 1 

Query: 89  RNWSVFEQLHSKKQNRLAQSRLNNLVFIKYNRALKR---RYNLRDIVDSISLKNIDDSNK 148
           RN +   Q++  K N + + RLN+LVF++YN  L+R     +  D VD +S  N++    
Sbjct: 636 RNLTSISQIYESK-NSIERQRLNDLVFVQYNMRLRRIGSESSGDDTVDPLSHSNMEVLED 695

[Close]
BLAST of Cucsa.207550 vs. NCBI nr
Match: gi|659131242|ref|XP_008465583.1| (PREDICTED: uncharacterized protein LOC103503220 [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 4.7e-72
Identity = 164/282 (58.16%), Postives = 189/282 (67.02%), Query Frame = 1 

Query: 2   EAIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLNLSFYNSNPNIQEDDEIVNG 61
           EAIA SFNNNEEKYKDIFTIID++WELQLH PLHAA YYLN SFY SN +IQEDDEIVNG
Sbjct: 124 EAIANSFNNNEEKYKDIFTIIDRRWELQLHRPLHAAGYYLNPSFYYSNLSIQEDDEIVNG 183

Query: 62  LYSCITKMVASLEVQDKILAELNKYKRRNWSVFEQLHSKKQNRLA---------QSRLNN 121
           LYSCITKMVASL+VQDKILA+L+KYKR      + L  +++++++         QS  N 
Sbjct: 184 LYSCITKMVASLDVQDKILAQLSKYKRAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNL 243

Query: 122 LVFI--------------------------KYNRALKRR----------------YNLRD 181
             F                           K NR  + R                YNLRD
Sbjct: 244 QKFAMRILDLTCSAFGCKRNWSVFEQLHSKKRNRLAQSRLNDLMFIKYNISLKRRYNLRD 303

Query: 182 IVDSISLKNIDDSNKWLIGRLDDNSEEEDELVFDDDSLTWGDVSRAVGTKEPSFYSRAK- 227
           IVD ISL++IDDSN+WLIGRLDD+S EEDELVFDDD+LTWG+VSRA G KEP+FYSRA+ 
Sbjct: 304 IVDPISLRDIDDSNEWLIGRLDDDS-EEDELVFDDDTLTWGNVSRAAGAKEPTFYSRARA 363

[Close]
BLAST of Cucsa.207550 vs. NCBI nr
Match: gi|778708160|ref|XP_011656133.1| (PREDICTED: uncharacterized protein LOC105435633 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 1.9e-60
Identity = 122/144 (84.72%), Postives = 131/144 (90.97%), Query Frame = 1 

Query: 88  RRNWSVFEQLHSKKQNRLAQSRLNNLVFIKYNRALKRRYNLRDIVDSISLKNIDDSNKWL 147
           +RNWSVFEQLHSKK+NRLAQSRLN+LVFIKYNRALKRRYNLRDIVD ISLK+IDDSN+WL
Sbjct: 143 KRNWSVFEQLHSKKRNRLAQSRLNDLVFIKYNRALKRRYNLRDIVDPISLKDIDDSNEWL 202

Query: 148 IGRLDDNSEEEDELVFDDDSLTWGDVSRAVGTKEPSFYSRA-----KTNVSCSSSFTTQR 207
           IGRLDD+SEE+DELVF+DDSLTWGDVSRAVG KEPSFYSRA     KT VSCSSS TTQR
Sbjct: 203 IGRLDDDSEEDDELVFNDDSLTWGDVSRAVGAKEPSFYSRASTSKPKTIVSCSSSSTTQR 262

Query: 208 KQVNLDDFDLEEEDTDWYMCNKGV 227
           KQVNLDDFDLEEEDTD Y  N+ V
Sbjct: 263 KQVNLDDFDLEEEDTDGYKSNERV 286

[Close]
BLAST of Cucsa.207550 vs. NCBI nr
Match: gi|778708160|ref|XP_011656133.1| (PREDICTED: uncharacterized protein LOC105435633 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 2.9e-37
Identity = 81/105 (77.14%), Postives = 92/105 (87.62%), Query Frame = 1 

Query: 2   EAIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLNLSFYNSNPNIQEDDEIVNG 61
           EAIAKSFNNNEEKYKDIFTIIDK+WELQLH PLHAA YYLNLSFY  NPNIQ+DDEIVNG
Sbjct: 6   EAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNLSFYYLNPNIQKDDEIVNG 65

Query: 62  LYSCITKMVASLEVQDKILAELNKYKRRNWSVFEQLHSKKQNRLA 107
           LYSCITKMVASLEVQDKILAEL+KYKR      + L  +++++++
Sbjct: 66  LYSCITKMVASLEVQDKILAELSKYKRAEALFGQPLAIRQRDKIS 110


HSP 2 Score: 223.8 bits (569), Expect = 3.1e-55
Identity = 113/145 (77.93%), Postives = 128/145 (88.28%), Query Frame = 1 

Query: 88  RRNWSVFEQLHSKKQNRLAQSRLNNLVFIKYNRALKRRYNLRDIVDSISLKNIDDSNKWL 147
           +RNWSVFEQLH+KK+NRLAQSRLN+LVFIKYNRALKRRY+LRDIVD ISL++I+DSN+WL
Sbjct: 33  KRNWSVFEQLHNKKRNRLAQSRLNDLVFIKYNRALKRRYSLRDIVDPISLRDINDSNEWL 92

Query: 148 IGRLDDNSEEEDELVFDDDSLTWGDVSRAVGTKEPSFYSRAK----TNVSCSSSFTTQR- 207
           IGRLDD+SEEEDELVFDDD+LTWGDVSRA   KEP+FYSRA+    TNVSCSSS TTQ  
Sbjct: 93  IGRLDDDSEEEDELVFDDDTLTWGDVSRAAEAKEPTFYSRARVSEATNVSCSSSSTTQST 152

Query: 208 -KQVNLDDFDLEEEDTDWYMCNKGV 227
            KQ+NLDD D EEEDTD Y  N+GV
Sbjct: 153 PKQINLDDSDQEEEDTDGYKSNEGV 177

[Close]
BLAST of Cucsa.207550 vs. NCBI nr
Match: gi|659114862|ref|XP_008457261.1| (PREDICTED: uncharacterized protein LOC103496986 [Cucumis melo])

HSP 1 Score: 221.1 bits (562), Expect = 2.0e-54
Identity = 113/145 (77.93%), Postives = 127/145 (87.59%), Query Frame = 1 

Query: 88  RRNWSVFEQLHSKKQNRLAQSRLNNLVFIKYNRALKRRYNLRDIVDSISLKNIDDSNKWL 147
           +RNWSVFE LHSKK+ RLAQSRLN+LVFIKYNRALKRRYNLRDI D ISL++IDDSN+WL
Sbjct: 71  KRNWSVFEHLHSKKRKRLAQSRLNDLVFIKYNRALKRRYNLRDIADPISLRDIDDSNEWL 130

Query: 148 IGRLDDNSEEEDELVFDDDSLTWGDVSRAVGTKEPSFYSRAK----TNVSCSSSFTTQ-- 207
           IGRLDD+SEEEDELVFDDD+LTWGDVSRAVG KEP+FYS+A+    TNVSCSSS TTQ  
Sbjct: 131 IGRLDDDSEEEDELVFDDDTLTWGDVSRAVGAKEPTFYSKARASGATNVSCSSSSTTQPT 190

Query: 208 RKQVNLDDFDLEEEDTDWYMCNKGV 227
            KQ+NLDD D +EEDTD Y  N+GV
Sbjct: 191 PKQINLDDSD-QEEDTDGYKSNEGV 214

[Close]
BLAST of Cucsa.207550 vs. NCBI nr
Match: gi|659114862|ref|XP_008457261.1| (PREDICTED: uncharacterized protein LOC103496986 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 3.2e-28
Identity = 96/215 (44.65%), Postives = 122/215 (56.74%), Query Frame = 1 

Query: 69  MVASLEVQDKILAELNKYKRRNWSVFEQLHSKKQNRLA---------QSRLN-------- 128
           MVASL+VQDKILAEL+KYKR      + L  +++++++         QS  N        
Sbjct: 1   MVASLDVQDKILAELSKYKRAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFPMRI 60

Query: 129 ------------NLVFIKYNRALKRR----YNLRDIVDS---------ISLKNIDDSNK- 188
                       N    ++  + KR+      L D+V            +L++I D    
Sbjct: 61  LGLTCSASGCKRNWSVFEHLHSKKRKRLAQSRLNDLVFIKYNRALKRRYNLRDIADPISL 120

Query: 189 --------WLIGRLDDNSEEEDELVFDDDSLTWGDVSRAVGTKEPSFYSRAK----TNVS 227
                   WLIGRLDD+SEEEDELVFDDD+LTWGDVSRAVG KEP+FYS+A+    TNVS
Sbjct: 121 RDIDDSNEWLIGRLDDDSEEEDELVFDDDTLTWGDVSRAVGAKEPTFYSKARASGATNVS 180


HSP 2 Score: 218.4 bits (555), Expect = 1.3e-53
Identity = 117/266 (43.98%), Postives = 156/266 (58.65%), Query Frame = 1 

Query: 2   EAIAKSFNNNEEKYKDIFTIIDKKWELQLHFPLHAAEYYLNLSFYNSNPNIQEDDEIVNG 61
           + I +SFN NEEKYK+IF +IDK+WE+QLH PLHAA Y+LN  F+   P I+ D +I++ 
Sbjct: 323 DTIVRSFNGNEEKYKEIFNVIDKRWEIQLHRPLHAARYFLNPEFFYDKPEIEHDAKIMSD 382

Query: 62  LYSCITKMVASLEVQDKILAELNKYK-----------------------RRNWSVFEQLH 121
           LY CI ++      Q+K++AE   Y                        +RNWS+FE +H
Sbjct: 383 LYKCILRLTREPAKQEKVVAEWAVYGASAPNLQKLIMKVLNLTCSALGCKRNWSIFENIH 442

Query: 122 SKKQNRLAQSRLNNLVFIKYNRALKRRYNLRDIVDSISLKNIDDSNKWLIGRLDDNSEE- 181
           SK++NRL    LN+LV+IKYNRALKRRYN  + +D ISLK+I DSN+WLIGR+ D     
Sbjct: 443 SKRRNRLDHQHLNDLVYIKYNRALKRRYNECNTIDPISLKDIGDSNEWLIGRMKDEDSHG 502

Query: 182 --EDELVFDDDSLTWGDVSRAVGTKEPSFYSRAKTNVS----------CSSSFTTQRKQV 226
             +D+ VFDDD LTWGDV+RA G +E  F +RA+   S           SSS T     +
Sbjct: 503 GAQDDFVFDDDHLTWGDVARATGAEEARFDTRARAKASSSIIPPTRGIASSSRTLPSHSL 562

The following BLAST results are available for this feature:
BLAST of Cucsa.207550 vs. TrEMBL
Match NameE-valueIdentityDescription
A5BSH6_VITVI9.0e-5443.98Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025296 PE=4 SV=1[more]
A5C1A1_VITVI3.8e-5247.03Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008052 PE=4 SV=1[more]
A5AEN2_VITVI6.5e-5243.72Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030478 PE=4 SV=1[more]
A5BQ63_VITVI6.1e-5045.93Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009577 PE=4 SV=1[more]
A5ATT7_VITVI1.1e-4850.76Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005541 PE=4 SV=1[more]
BLAST of Cucsa.207550 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G33406.16.4e-2750.98 hAT dimerisation domain-containing protein / transposase-related[more]
AT3G13030.13.4e-1241.38 hAT transposon superfamily protein[more]
AT3G13020.11.8e-0837.21 hAT transposon superfamily protein[more]
AT3G22220.16.3e-0637.50 hAT transposon superfamily[more]
BLAST of Cucsa.207550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131242|ref|XP_008465583.1|4.7e-7258.16PREDICTED: uncharacterized protein LOC103503220 [Cucumis melo][more]
gi|778708160|ref|XP_011656133.1|1.9e-6084.72PREDICTED: uncharacterized protein LOC105435633 [Cucumis sativus][more]
gi|778708160|ref|XP_011656133.1|2.9e-3777.14PREDICTED: uncharacterized protein LOC105435633 [Cucumis sativus][more]
gi|659114862|ref|XP_008457261.1|2.0e-5477.93PREDICTED: uncharacterized protein LOC103496986 [Cucumis melo][more]
gi|659114862|ref|XP_008457261.1|3.2e-2844.65PREDICTED: uncharacterized protein LOC103496986 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.207550.1Cucsa.207550.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 9..125
score: 1.3
NoneNo IPR availablePANTHERPTHR32166FAMILY NOT NAMEDcoord: 2..190
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.207550Cucumber (Chinese Long) v3cgycucB332
Cucsa.207550Watermelon (97103) v2cgywmbB386
Cucsa.207550Wax gourdcgywgoB435
Cucsa.207550Cucurbita maxima (Rimu)cgycmaB0610
Cucsa.207550Cucurbita maxima (Rimu)cgycmaB0611
Cucsa.207550Cucurbita moschata (Rifu)cgycmoB0611
Cucsa.207550Cucurbita moschata (Rifu)cgycmoB0612
Cucsa.207550Wild cucumber (PI 183967)cgycpiB327
Cucsa.207550Cucumber (Chinese Long) v2cgycuB314
Cucsa.207550Melon (DHL92) v3.5.1cgymeB374
Cucsa.207550Watermelon (Charleston Gray)cgywcgB383
Cucsa.207550Watermelon (97103) v1cgywmB407
Cucsa.207550Cucurbita pepo (Zucchini)cgycpeB0582
Cucsa.207550Cucurbita pepo (Zucchini)cgycpeB0583
Cucsa.207550Bottle gourd (USVL1VR-Ls)cgylsiB354
Cucsa.207550Melon (DHL92) v3.6.1cgymedB371
Cucsa.207550Silver-seed gourdcarcgyB0511