Cucsa.207400 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.207400
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLOB domain-containing protein, putative
Locationscaffold01443 : 241773 .. 242696 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCGACTTCAACTCTTCTCCTTTCTCACTCCCCGTCGCCGTCTCCGTCTCCTTCACCGCCGCCGACTGTTCAGGCCCACGTGGTGGTCACTCCATGTGCGGCCTGCAAGATTCTGCGTCGGAGATGCACACAGAAATGCGTATTGGCGCCTTATTTTCCTCCCTCTGATCCTCTTAAGTTCACCATTGCTCACCGTATCTTTGGCGCTAGCAACATCATCAAATTACTTTTAGTACTTCCTTGATCCCTAATTTTCTGTTTCTCTCTTTCAAATTTCGCTGTCTTTTCTTCTTGTTTCTATGTTTGAAAATTATGAATTCCGTTATTGAAATTGAAAATTGACCTTAACAACTTAACGAAAAACCATCGTTCTGGCTGGAATGAAGTTTGACGAATTCACAATCCTATTATGTTTGATTGCTTTTGCTTGATGATAATTTGGAGCTATTACGTTCATACATCATGAAAATTGGTAGAATCAAATGAAAACACCCAACTGTTCGATTAATGCCCTCGAACAATCCATCATATTGAATGTTTTATTGAATTCTTCAGGATCTTCCTGATTCACAAAGGGCGGATGCAGTGAGTAGTTTAGTATATGAAGCAAGTGCAAGAATTAGAGATCCAGTTTATGGATGTGCAGGGGCCATTTGTCAGCTTCAAAAACAGATAAATGAATTGCAAGCAGAGCTAGCCAAGACACAAGCTGAGCTTGTCAATATCCATTGCCACCAAACCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCCCAAACGCCGCCACCGATGTCATCATCATCGCTACTGCCGGAGCACCGCTCACTTGACAACAGTTTCAACATCGTCGCCACTCCTCAAAGCTACCAAGGGTACACATCTTTGTTTGGGGATAGCAATATTTGGGACCCTCTTTGGACATGA

mRNA sequence

CCCGACTTCAACTCTTCTCCTTTCTCACTCCCCGTCGCCGTCTCCGTCTCCTTCACCGCCGCCGACTGTTCAGGCCCACGTGGTGGTCACTCCATGTGCGGCCTGCAAGATTCTGCGTCGGAGATGCACACAGAAATGCGTATTGGCGCCTTATTTTCCTCCCTCTGATCCTCTTAAGTTCACCATTGCTCACCGTATCTTTGGCGCTAGCAACATCATCAAATTACTTTTAGATCTTCCTGATTCACAAAGGGCGGATGCAGTGAGTAGTTTAGTATATGAAGCAAGTGCAAGAATTAGAGATCCAGTTTATGGATGTGCAGGGGCCATTTGTCAGCTTCAAAAACAGATAAATGAATTGCAAGCAGAGCTAGCCAAGACACAAGCTGAGCTTGTCAATATCCATTGCCACCAAACCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCCCAAACGCCGCCACCGATGTCATCATCATCGCTACTGCCGGAGCACCGCTCACTTGACAACAGTTTCAACATCGTCGCCACTCCTCAAAGCTACCAAGGGTACACATCTTTGTTTGGGGATAGCAATATTTGGGACCCTCTTTGGACATGA

Coding sequence (CDS)

CCCGACTTCAACTCTTCTCCTTTCTCACTCCCCGTCGCCGTCTCCGTCTCCTTCACCGCCGCCGACTGTTCAGGCCCACGTGGTGGTCACTCCATGTGCGGCCTGCAAGATTCTGCGTCGGAGATGCACACAGAAATGCGTATTGGCGCCTTATTTTCCTCCCTCTGATCCTCTTAAGTTCACCATTGCTCACCGTATCTTTGGCGCTAGCAACATCATCAAATTACTTTTAGATCTTCCTGATTCACAAAGGGCGGATGCAGTGAGTAGTTTAGTATATGAAGCAAGTGCAAGAATTAGAGATCCAGTTTATGGATGTGCAGGGGCCATTTGTCAGCTTCAAAAACAGATAAATGAATTGCAAGCAGAGCTAGCCAAGACACAAGCTGAGCTTGTCAATATCCATTGCCACCAAACCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCCCAAACGCCGCCACCGATGTCATCATCATCGCTACTGCCGGAGCACCGCTCACTTGACAACAGTTTCAACATCGTCGCCACTCCTCAAAGCTACCAAGGGTACACATCTTTGTTTGGGGATAGCAATATTTGGGACCCTCTTTGGACATGA

Protein sequence

PTSTLLLSHSPSPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT*
Homology
[Close]
BLAST of Cucsa.207400 vs. Swiss-Prot
Match: LBD11_ARATH (LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2)

HSP 1 Score: 208.4 bits (529), Expect = 7.4e-53
Identity = 109/211 (51.66%), Postives = 138/211 (65.40%), Query Frame = 1 

Query: 2   TSTLLLSHSPSPSPSPSPPPTVQAH----VVVTPCAACKILRRRCTQKCVLAPYFPPSDP 61
           T T    +SPSP+ SP PPP+ Q      VV++PCAACKILRRRC  KCVLAPYFPP+DP
Sbjct: 22  TETTTPVNSPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDP 81

Query: 62  LKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQI 121
            KFTIAHR+FGASNIIK L +LP+SQR DAV+S+VYEA AR+RDPVYGCAGAI  LQ+Q+
Sbjct: 82  AKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQV 141

Query: 122 NELQAELAKTQAELVNIHCHQTNLVALICK-ELAQTPPPMSSSSLLPEHRSLDNSFNIVA 181
           +ELQA+LAKTQ ELV +   +++L+ LI   E  +          +    S ++    ++
Sbjct: 142 SELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDEFIS 201

Query: 182 TPQSYQGYTSLFGDSN--------IWDPLWT 200
           +P           D+N         WDPLWT
Sbjct: 202 SPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]
BLAST of Cucsa.207400 vs. Swiss-Prot
Match: LBD1_ARATH (LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.9e-51
Identity = 106/190 (55.79%), Postives = 132/190 (69.47%), Query Frame = 1 

Query: 10  SPSPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIFGA 69
           +P  S S SPPP++   VV++PCAACKILRRRC ++CVLAPYFPP+DP KFTIAHR+FGA
Sbjct: 12  TPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGA 71

Query: 70  SNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQA 129
           SNIIK L +LP+SQR DAV+S+VYEA ARIRDPVYGCAGAI  LQ+Q++ELQA+LAK Q 
Sbjct: 72  SNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQV 131

Query: 130 ELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNSFNIVATPQSYQGYTSLFG 189
           E+VN+   ++NL+ LI     Q      + S      S D  F      +S    + L+ 
Sbjct: 132 EMVNMQFQRSNLLELIYNMDQQQKQEQDNMSF----ESNDLGF---LEDKSNTNSSMLW- 189

Query: 190 DSNIWDPLWT 200
               WDPLWT
Sbjct: 192 ----WDPLWT 189

[Close]
BLAST of Cucsa.207400 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.8e-35
Identity = 75/137 (54.74%), Postives = 97/137 (70.80%), Query Frame = 1 

Query: 30  TPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 89
           +PCAACK+LRRRC Q CV +PYFP  +P KF   HR+FGASN+ K+L +LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 90  SLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQ-TNLVAL-ICK 149
           S+VYEA+AR+RDPVYGC GAI  LQ+QI+ LQA+LA  QAE+V++   Q TN     +C 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 150 ELAQTPPPMSSSSLLPE 165
           +   +    SS  + P+
Sbjct: 132 DSPSSSGSPSSKQVSPQ 148

[Close]
BLAST of Cucsa.207400 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 5.3e-35
Identity = 66/105 (62.86%), Postives = 86/105 (81.90%), Query Frame = 1 

Query: 30  TPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 89
           +PCA+CK+LRRRC + C+ APYFPP DP KF I H++FGASN+ K+L +LP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 90  SLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNI 135
           SLV+EA+AR+RDPVYGC GAI  LQ Q+++LQ +LA  QAE++ I
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCI 111

[Close]
BLAST of Cucsa.207400 vs. Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-34
Identity = 66/118 (55.93%), Postives = 89/118 (75.42%), Query Frame = 1 

Query: 15  PSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIFGASNIIK 74
           P   PP T+     +TPCAACK+LRRRC Q+C  +PYF P +P KF   H++FGASN+ K
Sbjct: 32  PMSGPPGTLNT---ITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSK 91

Query: 75  LLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELV 133
           +L+++P+SQRADA +SLVYEA+ R+RDPVYGC GAI  LQ+Q+  LQAEL   ++E++
Sbjct: 92  MLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEIL 146

[Close]
BLAST of Cucsa.207400 vs. TrEMBL
Match: A0A0A0LS55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G088450 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.3e-84
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 1 

Query: 43  TQKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDP 102
           T KCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDP
Sbjct: 9   TMKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDP 68

Query: 103 VYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLL 162
           VYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLL
Sbjct: 69  VYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLL 128

Query: 163 PEHRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT 200
           PEHRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT
Sbjct: 129 PEHRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT 165

[Close]
BLAST of Cucsa.207400 vs. TrEMBL
Match: A0A067LHN9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05582 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 8.5e-64
Identity = 126/194 (64.95%), Postives = 149/194 (76.80%), Query Frame = 1 

Query: 8   SHSPSPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIF 67
           S SP  +P+ +PPP V   VVV+PCAACKILRRRC  KCVLAPYFPP++P KFTIAHR+F
Sbjct: 25  SASPPQTPTFTPPPPVP--VVVSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVF 84

Query: 68  GASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKT 127
           GASNIIK L +LP+SQRADAVSS+VYEASARIRDPVYGCAGAIC LQKQI+ELQA+LAK 
Sbjct: 85  GASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQISELQAQLAKA 144

Query: 128 QAELVNIHCHQTNLVALICK--ELAQTPPPMSSSSLLPEHRSLDNSFNIVATPQSYQGYT 187
           QAELVN+ C Q NLVA++C   E+AQ+P   S  S+           N ++TPQSYQ   
Sbjct: 145 QAELVNMQCQQANLVAILCNCMEMAQSPQQSSEQSV----------DNFISTPQSYQSNP 204

Query: 188 SLFGDSNIWDPLWT 200
               +SN+W+PLWT
Sbjct: 205 CFIDESNLWEPLWT 206

[Close]
BLAST of Cucsa.207400 vs. TrEMBL
Match: M5W070_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011528mg PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.2e-63
Identity = 131/207 (63.29%), Postives = 155/207 (74.88%), Query Frame = 1 

Query: 2   TSTLLLSHSPSPSPSPSPPP-----TVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSD 61
           TS+  LS SPS SPS  PPP     T    VV++PCAACKILRRRC +KCVLAPYFPP++
Sbjct: 8   TSSTPLSQSPSSSPSSPPPPLPPTPTPNPPVVISPCAACKILRRRCAEKCVLAPYFPPTE 67

Query: 62  PLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQ 121
           P KFTIAHR+FGASNIIK L +LP+SQRADAVSS+VYEASARIRDPVYGCAGAIC LQKQ
Sbjct: 68  PAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQ 127

Query: 122 INELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNSFNIVA 181
           +NELQA+LAK QAELVN+ C Q NLVALIC E+ Q      S+      +SLD++F I +
Sbjct: 128 VNELQAQLAKAQAELVNMQCQQANLVALICMEMTQ------SNDQGSPQQSLDHNF-ITS 187

Query: 182 TPQSYQGYTSLFGDS----NIWDPLWT 200
           +  S QG  S   D+    ++W+PLWT
Sbjct: 188 SHGSNQGNISFLDDTTTLGSLWEPLWT 207

[Close]
BLAST of Cucsa.207400 vs. TrEMBL
Match: A0A0S3SCU3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G190300 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.3e-63
Identity = 129/210 (61.43%), Postives = 154/210 (73.33%), Query Frame = 1 

Query: 1   PTSTLLLSHSP---SPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDP 60
           PTS+  LSHSP   S SP P PPPTV    V++PCAACKILRRRC +KCVLAPYFPP++P
Sbjct: 9   PTSSAPLSHSPTSSSSSPPPPPPPTV----VMSPCAACKILRRRCAEKCVLAPYFPPTEP 68

Query: 61  LKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQI 120
            KFTIAHR+FGASNIIK L +LP+SQRADAV+S+VYEASARIRDPVYGCAGAICQLQKQ+
Sbjct: 69  AKFTIAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARIRDPVYGCAGAICQLQKQV 128

Query: 121 NELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNSFNIVAT 180
           NELQA+LAK+QAELV +   Q NLVALIC E+AQ+P      S+           N ++T
Sbjct: 129 NELQAQLAKSQAELVTMQLQQANLVALICMEMAQSPQESPQQSV----------DNFIST 188

Query: 181 PQSYQGYTSLFGD--------SNIWDPLWT 200
           P    GY S   +        +++W+PLWT
Sbjct: 189 PPHTGGYQSGVNNFFEENTSPNSLWEPLWT 204

[Close]
BLAST of Cucsa.207400 vs. TrEMBL
Match: A0A0L9V6W4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g155500 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.3e-63
Identity = 129/210 (61.43%), Postives = 154/210 (73.33%), Query Frame = 1 

Query: 1   PTSTLLLSHSP---SPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDP 60
           PTS+  LSHSP   S SP P PPPTV    V++PCAACKILRRRC +KCVLAPYFPP++P
Sbjct: 9   PTSSAPLSHSPTSSSSSPPPPPPPTV----VMSPCAACKILRRRCAEKCVLAPYFPPTEP 68

Query: 61  LKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQI 120
            KFTIAHR+FGASNIIK L +LP+SQRADAV+S+VYEASARIRDPVYGCAGAICQLQKQ+
Sbjct: 69  AKFTIAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARIRDPVYGCAGAICQLQKQV 128

Query: 121 NELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNSFNIVAT 180
           NELQA+LAK+QAELV +   Q NLVALIC E+AQ+P      S+           N ++T
Sbjct: 129 NELQAQLAKSQAELVTMQLQQANLVALICMEMAQSPQESPQQSV----------DNFIST 188

Query: 181 PQSYQGYTSLFGD--------SNIWDPLWT 200
           P    GY S   +        +++W+PLWT
Sbjct: 189 PPHTGGYQSGVNNFFEENTSPNSLWEPLWT 204

[Close]
BLAST of Cucsa.207400 vs. TAIR10
Match: AT2G28500.1 (AT2G28500.1 LOB domain-containing protein 11)

HSP 1 Score: 208.4 bits (529), Expect = 4.2e-54
Identity = 109/211 (51.66%), Postives = 138/211 (65.40%), Query Frame = 1 

Query: 2   TSTLLLSHSPSPSPSPSPPPTVQAH----VVVTPCAACKILRRRCTQKCVLAPYFPPSDP 61
           T T    +SPSP+ SP PPP+ Q      VV++PCAACKILRRRC  KCVLAPYFPP+DP
Sbjct: 22  TETTTPVNSPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDP 81

Query: 62  LKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQI 121
            KFTIAHR+FGASNIIK L +LP+SQR DAV+S+VYEA AR+RDPVYGCAGAI  LQ+Q+
Sbjct: 82  AKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQV 141

Query: 122 NELQAELAKTQAELVNIHCHQTNLVALICK-ELAQTPPPMSSSSLLPEHRSLDNSFNIVA 181
           +ELQA+LAKTQ ELV +   +++L+ LI   E  +          +    S ++    ++
Sbjct: 142 SELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDEFIS 201

Query: 182 TPQSYQGYTSLFGDSN--------IWDPLWT 200
           +P           D+N         WDPLWT
Sbjct: 202 SPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]
BLAST of Cucsa.207400 vs. TAIR10
Match: AT1G07900.1 (AT1G07900.1 LOB domain-containing protein 1)

HSP 1 Score: 201.8 bits (512), Expect = 3.9e-52
Identity = 106/190 (55.79%), Postives = 132/190 (69.47%), Query Frame = 1 

Query: 10  SPSPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIFGA 69
           +P  S S SPPP++   VV++PCAACKILRRRC ++CVLAPYFPP+DP KFTIAHR+FGA
Sbjct: 12  TPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGA 71

Query: 70  SNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQA 129
           SNIIK L +LP+SQR DAV+S+VYEA ARIRDPVYGCAGAI  LQ+Q++ELQA+LAK Q 
Sbjct: 72  SNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQV 131

Query: 130 ELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNSFNIVATPQSYQGYTSLFG 189
           E+VN+   ++NL+ LI     Q      + S      S D  F      +S    + L+ 
Sbjct: 132 EMVNMQFQRSNLLELIYNMDQQQKQEQDNMSF----ESNDLGF---LEDKSNTNSSMLW- 189

Query: 190 DSNIWDPLWT 200
               WDPLWT
Sbjct: 192 ----WDPLWT 189

[Close]
BLAST of Cucsa.207400 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 150.6 bits (379), Expect = 1.0e-36
Identity = 75/137 (54.74%), Postives = 97/137 (70.80%), Query Frame = 1 

Query: 30  TPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 89
           +PCAACK+LRRRC Q CV +PYFP  +P KF   HR+FGASN+ K+L +LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 90  SLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQ-TNLVAL-ICK 149
           S+VYEA+AR+RDPVYGC GAI  LQ+QI+ LQA+LA  QAE+V++   Q TN     +C 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 150 ELAQTPPPMSSSSLLPE 165
           +   +    SS  + P+
Sbjct: 132 DSPSSSGSPSSKQVSPQ 148

[Close]
BLAST of Cucsa.207400 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 149.1 bits (375), Expect = 3.0e-36
Identity = 66/105 (62.86%), Postives = 86/105 (81.90%), Query Frame = 1 

Query: 30  TPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVS 89
           +PCA+CK+LRRRC + C+ APYFPP DP KF I H++FGASN+ K+L +LP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 90  SLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNI 135
           SLV+EA+AR+RDPVYGC GAI  LQ Q+++LQ +LA  QAE++ I
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCI 111

[Close]
BLAST of Cucsa.207400 vs. TAIR10
Match: AT2G40470.1 (AT2G40470.1 LOB domain-containing protein 15)

HSP 1 Score: 147.9 bits (372), Expect = 6.7e-36
Identity = 66/118 (55.93%), Postives = 89/118 (75.42%), Query Frame = 1 

Query: 15  PSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIFGASNIIK 74
           P   PP T+     +TPCAACK+LRRRC Q+C  +PYF P +P KF   H++FGASN+ K
Sbjct: 32  PMSGPPGTLNT---ITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSK 91

Query: 75  LLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELV 133
           +L+++P+SQRADA +SLVYEA+ R+RDPVYGC GAI  LQ+Q+  LQAEL   ++E++
Sbjct: 92  MLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEIL 146

[Close]
BLAST of Cucsa.207400 vs. NCBI nr
Match: gi|449459130|ref|XP_004147299.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 408.3 bits (1048), Expect = 7.8e-111
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1 

Query: 1   PTSTLLLSHSPSPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKF 60
           PTSTLLLSHSPSPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKF
Sbjct: 10  PTSTLLLSHSPSPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKF 69

Query: 61  TIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINEL 120
           TIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINEL
Sbjct: 70  TIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINEL 129

Query: 121 QAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNSFNIVATPQS 180
           QAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNSFNIVATPQS
Sbjct: 130 QAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNSFNIVATPQS 189

Query: 181 YQGYTSLFGDSNIWDPLWT 200
           YQGYTSLFGDSNIWDPLWT
Sbjct: 190 YQGYTSLFGDSNIWDPLWT 208

[Close]
BLAST of Cucsa.207400 vs. NCBI nr
Match: gi|659072131|ref|XP_008463550.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 371.3 bits (952), Expect = 1.1e-99
Identity = 186/199 (93.47%), Postives = 190/199 (95.48%), Query Frame = 1 

Query: 1   PTSTLLLSHSPSPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKF 60
           PTSTLL   S SPSPSPSPPPTVQA VVV+PCAACKILRRRC +KCVLAPYFPPSDPLKF
Sbjct: 10  PTSTLL---SQSPSPSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKF 69

Query: 61  TIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINEL 120
           TIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINEL
Sbjct: 70  TIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINEL 129

Query: 121 QAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNSFNIVATPQS 180
           QAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSS SLLP+HRSLDN+FNI ATPQS
Sbjct: 130 QAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNI-ATPQS 189

Query: 181 YQGYTSLFGDSNIWDPLWT 200
           YQGYTSLF DSNIWDPLWT
Sbjct: 190 YQGYTSLFEDSNIWDPLWT 204

[Close]
BLAST of Cucsa.207400 vs. NCBI nr
Match: gi|700209659|gb|KGN64755.1| (hypothetical protein Csa_1G088450 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 6.2e-84
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 1 

Query: 43  TQKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDP 102
           T KCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDP
Sbjct: 9   TMKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDP 68

Query: 103 VYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLL 162
           VYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLL
Sbjct: 69  VYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLL 128

Query: 163 PEHRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT 200
           PEHRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT
Sbjct: 129 PEHRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT 165

[Close]
BLAST of Cucsa.207400 vs. NCBI nr
Match: gi|802551592|ref|XP_012064881.1| (PREDICTED: LOB domain-containing protein 11-like [Jatropha curcas])

HSP 1 Score: 251.5 bits (641), Expect = 1.2e-63
Identity = 126/194 (64.95%), Postives = 149/194 (76.80%), Query Frame = 1 

Query: 8   SHSPSPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIF 67
           S SP  +P+ +PPP V   VVV+PCAACKILRRRC  KCVLAPYFPP++P KFTIAHR+F
Sbjct: 25  SASPPQTPTFTPPPPVP--VVVSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVF 84

Query: 68  GASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKT 127
           GASNIIK L +LP+SQRADAVSS+VYEASARIRDPVYGCAGAIC LQKQI+ELQA+LAK 
Sbjct: 85  GASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQISELQAQLAKA 144

Query: 128 QAELVNIHCHQTNLVALICK--ELAQTPPPMSSSSLLPEHRSLDNSFNIVATPQSYQGYT 187
           QAELVN+ C Q NLVA++C   E+AQ+P   S  S+           N ++TPQSYQ   
Sbjct: 145 QAELVNMQCQQANLVAILCNCMEMAQSPQQSSEQSV----------DNFISTPQSYQSNP 204

Query: 188 SLFGDSNIWDPLWT 200
               +SN+W+PLWT
Sbjct: 205 CFIDESNLWEPLWT 206

[Close]
BLAST of Cucsa.207400 vs. NCBI nr
Match: gi|595829650|ref|XP_007205910.1| (hypothetical protein PRUPE_ppa011528mg [Prunus persica])

HSP 1 Score: 249.6 bits (636), Expect = 4.6e-63
Identity = 131/207 (63.29%), Postives = 155/207 (74.88%), Query Frame = 1 

Query: 2   TSTLLLSHSPSPSPSPSPPP-----TVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPSD 61
           TS+  LS SPS SPS  PPP     T    VV++PCAACKILRRRC +KCVLAPYFPP++
Sbjct: 8   TSSTPLSQSPSSSPSSPPPPLPPTPTPNPPVVISPCAACKILRRRCAEKCVLAPYFPPTE 67

Query: 62  PLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQ 121
           P KFTIAHR+FGASNIIK L +LP+SQRADAVSS+VYEASARIRDPVYGCAGAIC LQKQ
Sbjct: 68  PAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQ 127

Query: 122 INELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNSFNIVA 181
           +NELQA+LAK QAELVN+ C Q NLVALIC E+ Q      S+      +SLD++F I +
Sbjct: 128 VNELQAQLAKAQAELVNMQCQQANLVALICMEMTQ------SNDQGSPQQSLDHNF-ITS 187

Query: 182 TPQSYQGYTSLFGDS----NIWDPLWT 200
           +  S QG  S   D+    ++W+PLWT
Sbjct: 188 SHGSNQGNISFLDDTTTLGSLWEPLWT 207

The following BLAST results are available for this feature:
BLAST of Cucsa.207400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD11_ARATH7.4e-5351.66LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2[more]
LBD1_ARATH6.9e-5155.79LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1[more]
LBD4_ARATH1.8e-3554.74LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1[more]
LBD12_ARATH5.3e-3562.86LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2[more]
LBD15_ARATH1.2e-3455.93LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2[more]
BLAST of Cucsa.207400 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LS55_CUCSA4.3e-8499.36Uncharacterized protein OS=Cucumis sativus GN=Csa_1G088450 PE=4 SV=1[more]
A0A067LHN9_JATCU8.5e-6464.95Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05582 PE=4 SV=1[more]
M5W070_PRUPE3.2e-6363.29Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011528mg PE=4 SV=1[more]
A0A0S3SCU3_PHAAN9.3e-6361.43Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G190300 PE=... [more]
A0A0L9V6W4_PHAAN9.3e-6361.43Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g155500 PE=4 SV=1[more]
BLAST of Cucsa.207400 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28500.14.2e-5451.66 LOB domain-containing protein 11[more]
AT1G07900.13.9e-5255.79 LOB domain-containing protein 1[more]
AT1G31320.11.0e-3654.74 LOB domain-containing protein 4[more]
AT2G30130.13.0e-3662.86 Lateral organ boundaries (LOB) domain family protein[more]
AT2G40470.16.7e-3655.93 LOB domain-containing protein 15[more]
BLAST of Cucsa.207400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449459130|ref|XP_004147299.1|7.8e-111100.00PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus][more]
gi|659072131|ref|XP_008463550.1|1.1e-9993.47PREDICTED: LOB domain-containing protein 1-like [Cucumis melo][more]
gi|700209659|gb|KGN64755.1|6.2e-8499.36hypothetical protein Csa_1G088450 [Cucumis sativus][more]
gi|802551592|ref|XP_012064881.1|1.2e-6364.95PREDICTED: LOB domain-containing protein 11-like [Jatropha curcas][more]
gi|595829650|ref|XP_007205910.1|4.6e-6363.29hypothetical protein PRUPE_ppa011528mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.207400.1Cucsa.207400.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 31..128
score: 1.2
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 30..131
score: 26
NoneNo IPR availableunknownCoilCoilcoord: 110..137
scor
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 5..198
score: 1.4E
NoneNo IPR availablePANTHERPTHR31301:SF6SUBFAMILY NOT NAMEDcoord: 5..198
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.207400Cucumber (Chinese Long) v3cgycucB332
Cucsa.207400Watermelon (97103) v2cgywmbB386
Cucsa.207400Wax gourdcgywgoB435
Cucsa.207400Cucurbita maxima (Rimu)cgycmaB0610
Cucsa.207400Cucurbita maxima (Rimu)cgycmaB0611
Cucsa.207400Cucurbita moschata (Rifu)cgycmoB0611
Cucsa.207400Cucurbita moschata (Rifu)cgycmoB0612
Cucsa.207400Wild cucumber (PI 183967)cgycpiB327
Cucsa.207400Cucumber (Chinese Long) v2cgycuB314
Cucsa.207400Melon (DHL92) v3.5.1cgymeB374
Cucsa.207400Watermelon (Charleston Gray)cgywcgB383
Cucsa.207400Watermelon (97103) v1cgywmB407
Cucsa.207400Cucurbita pepo (Zucchini)cgycpeB0582
Cucsa.207400Cucurbita pepo (Zucchini)cgycpeB0583
Cucsa.207400Bottle gourd (USVL1VR-Ls)cgylsiB354
Cucsa.207400Melon (DHL92) v3.6.1cgymedB371
Cucsa.207400Silver-seed gourdcarcgyB0511