Cucsa.205090 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAACGTCACCTCCGTCGTCTCCGGTGTCGGGAAAGTAGTTCTCTCTAATGGTTCCATTCAAGAATTCAATGAGCCGTTCACAGTGGCTGAGTTGATGCTTGAACATCCACGTCAAGTTGTCGTCGAGATTTCTAAGAGcACCGTCGTAGGAAAACGACCTACTCCGTTGCCAGCCGATGAAAAACTCAACTCGAACAAGGTCTGTCAATTAAATCATTGCTTTCTTTTAACTAATTTATTTATTAGTCAATTAGTTTTTCAATAGAGATTTTAGATGATTCGCTTTGTATTTATTGTTTATTGTAAATTAGTTAGTcAAAAaCAATGTGCTTAATATTAAATTGGCATATGACAAATGACAATTGgTTTCTTAATTTAGGAATTAGGATTATTATATTAATTAAAGTGGATAATTCATCATATTATCAACATGCAAGGTTTATATGATGCTACCCATAAGAGGAGGCAAGCCAGCATCATTGTCGTCGGAAGATATCCGTCGTGTTCTTCTATGTGCAAACTCGGCTTTACGGTCGCGCTCTCTCCTCCTTTCATCTTCTAAGGTTCTCCCTTGGTTTGCGAGGGCATGCACGGCAACGACAACAACGGCGTCGACAACAACgAGAGAGTACCGAGCAGATACTAAAAAGGAATTAGATGTTGTGAAGATGGAAGGAGAGGAAGTTGAATGGGAAACGGTGGAGGGAAGGCCGGAGTATTTGAGCAGACAGTTATCGGGCAGAGGTTGGAAGCCAAGTTTGGATACAATTAAGGAGAAGAAATTTGAGAAGAAACTTTCTCATTGGTTGTTCAAATTTTGA ATGGGAAACGTCACCTCCGTCGTCTCCGGTGTCGGGAAAGTAGTTCTCTCTAATGGTTCCATTCAAGAATTCAATGAGCCGTTCACAGTGGCTGAGTTGATGCTTGAACATCCACGTCAAGTTGTCGTCGAGATTTCTAAGAGCACCGTCGTAGGAAAACGACCTACTCCGTTGCCAGCCGATGAAAAACTCAACTCGAACAAGGTTTATATGATGCTACCCATAAGAGGAGGCAAGCCAGCATCATTGTCGTCGGAAGATATCCGTCGTGTTCTTCTATGTGCAAACTCGGCTTTACGGTCGCGCTCTCTCCTCCTTTCATCTTCTAAGGTTCTCCCTTGGTTTGCGAGGGCATGCACGGCAACGACAACAACGGCGTCGACAACAACGAGAGAGTACCGAGCAGATACTAAAAAGGAATTAGATGTTGTGAAGATGGAAGGAGAGGAAGTTGAATGGGAAACGGTGGAGGGAAGGCCGGAGTATTTGAGCAGACAGTTATCGGGCAGAGGTTGGAAGCCAAGTTTGGATACAATTAAGGAGAAGAAATTTGAGAAGAAACTTTCTCATTGGTTGTTCAAATTTTGA ATGGGAAACGTCACCTCCGTCGTCTCCGGTGTCGGGAAAGTAGTTCTCTCTAATGGTTCCATTCAAGAATTCAATGAGCCGTTCACAGTGGCTGAGTTGATGCTTGAACATCCACGTCAAGTTGTCGTCGAGATTTCTAAGAGcACCGTCGTAGGAAAACGACCTACTCCGTTGCCAGCCGATGAAAAACTCAACTCGAACAAGGTTTATATGATGCTACCCATAAGAGGAGGCAAGCCAGCATCATTGTCGTCGGAAGATATCCGTCGTGTTCTTCTATGTGCAAACTCGGCTTTACGGTCGCGCTCTCTCCTCCTTTCATCTTCTAAGGTTCTCCCTTGGTTTGCGAGGGCATGCACGGCAACGACAACAACGGCGTCGACAACAACgAGAGAGTACCGAGCAGATACTAAAAAGGAATTAGATGTTGTGAAGATGGAAGGAGAGGAAGTTGAATGGGAAACGGTGGAGGGAAGGCCGGAGTATTTGAGCAGACAGTTATCGGGCAGAGGTTGGAAGCCAAGTTTGGATACAATTAAGGAGAAGAAATTTGAGAAGAAACTTTCTCATTGGTTGTTCAAATTTTGA MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPADEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLLLSSSKVLPWFARACTATTTTASTTTREYRADTKKELDVVKMEGEEVEWETVEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKLSHWLFKF*
BLAST of Cucsa.205090 vs. TrEMBL
Match: A0A0A0K6C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407610 PE=4 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 1.6e-104 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1
BLAST of Cucsa.205090 vs. TrEMBL
Match: A0A067JZQ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14014 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 2.2e-48 Identity = 112/197 (56.85%), Postives = 135/197 (68.53%), Query Frame = 1
BLAST of Cucsa.205090 vs. TrEMBL
Match: A0A151SNJ0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_002566 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 6.4e-48 Identity = 106/195 (54.36%), Postives = 132/195 (67.69%), Query Frame = 1
BLAST of Cucsa.205090 vs. TrEMBL
Match: A0A061DZ20_THECC (Multidrug resistance protein ABC transporter family protein, putative OS=Theobroma cacao GN=TCM_004788 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 8.3e-48 Identity = 112/201 (55.72%), Postives = 139/201 (69.15%), Query Frame = 1
BLAST of Cucsa.205090 vs. TrEMBL
Match: M1AI62_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009037 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 3.5e-46 Identity = 104/200 (52.00%), Postives = 136/200 (68.00%), Query Frame = 1
BLAST of Cucsa.205090 vs. TAIR10
Match: AT4G02090.1 (AT4G02090.1 unknown protein) HSP 1 Score: 125.6 bits (314), Expect = 3.5e-29 Identity = 86/210 (40.95%), Postives = 116/210 (55.24%), Query Frame = 1
BLAST of Cucsa.205090 vs. TAIR10
Match: AT5G17350.1 (AT5G17350.1 unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 1.4e-06 Identity = 47/188 (25.00%), Postives = 81/188 (43.09%), Query Frame = 1
BLAST of Cucsa.205090 vs. TAIR10
Match: AT3G03280.1 (AT3G03280.1 unknown protein) HSP 1 Score: 49.3 bits (116), Expect = 3.2e-06 Identity = 49/191 (25.65%), Postives = 85/191 (44.50%), Query Frame = 1
BLAST of Cucsa.205090 vs. NCBI nr
Match: gi|449436427|ref|XP_004135994.1| (PREDICTED: uncharacterized protein LOC101221516 [Cucumis sativus]) HSP 1 Score: 386.7 bits (992), Expect = 2.4e-104 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1
BLAST of Cucsa.205090 vs. NCBI nr
Match: gi|659101216|ref|XP_008451489.1| (PREDICTED: uncharacterized protein LOC103492763 [Cucumis melo]) HSP 1 Score: 369.8 bits (948), Expect = 3.0e-99 Identity = 186/195 (95.38%), Postives = 188/195 (96.41%), Query Frame = 1
BLAST of Cucsa.205090 vs. NCBI nr
Match: gi|802700683|ref|XP_012083799.1| (PREDICTED: uncharacterized protein LOC105643306 [Jatropha curcas]) HSP 1 Score: 200.3 bits (508), Expect = 3.1e-48 Identity = 112/197 (56.85%), Postives = 135/197 (68.53%), Query Frame = 1
BLAST of Cucsa.205090 vs. NCBI nr
Match: gi|1012345136|gb|KYP56328.1| (hypothetical protein KK1_002566 [Cajanus cajan]) HSP 1 Score: 198.7 bits (504), Expect = 9.1e-48 Identity = 106/195 (54.36%), Postives = 132/195 (67.69%), Query Frame = 1
BLAST of Cucsa.205090 vs. NCBI nr
Match: gi|590719531|ref|XP_007051081.1| (Multidrug resistance protein ABC transporter family protein, putative [Theobroma cacao]) HSP 1 Score: 198.4 bits (503), Expect = 1.2e-47 Identity = 112/201 (55.72%), Postives = 139/201 (69.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |