Cucsa.199000 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.199000
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Protease inhibitor/seed storage/lipid transfer family protein
Location	scaffold01357 : 1854142 .. 1854958 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCTCTTCCACATCTCCCCCTTCCTCAACAAGCTATCTCATACCTAAGTCTGCTGTTTCTCCTGCACGTTCTACCGATCACCATATCACAAGGTCCAACCATATCAACTCCCACCATAGCTCAATGCACGACGAGTATTCTTCCATTGGCTTCTTGTGCACCTTTTGTGCAAGGTGTAACACCAACACCACCTATGGGATGCTGTGATAACCTGAAACAACTCTACAACGTTGTCCCTAACTGCCTTTGCCTCTTGCTGAATGGCACTAACTTAAGCTCTTTCCCTATCAACACTACTAGAGCCCTCCAGCTGCCTGATATTTGCAGCCTTCAAGTTAACATCTCCACTTGTTCAGGTAAAACTATAATCCTGTCATCCTAAAAGATGTTATATTTTTtCTACTCTCTACTTCTCTCTACAATCTGATCCCACGGTTTGACATTTATAATTCTTTGAACGGTTCTTTGAAGCTCTCCTTGGGCCACCTAGTCCACCCAGTTCTCATGTTCCTCCTAGAGTACACATCAACTCCACAATTAGCAATGCTACGGTTCTAGGTATACTTCAGATATTCATCCAGACGATATAGTTTTTGGTTCAGTTCTACTTCTAATACAGCCTTCGAATATGTAACAATCTGACTCTACTTTTGTAAATTTCAGCTTCTCCAATGACTCAACCAACACCAAAACCTAGCATTGTGGGTTTAGGATTGGGCAAGATCAGTGCTAGTTTCAAATTAAAGGGAGGAATTCAGCTCACAGTAGTGATAACAATAAGCACTTTTCTGTTTCTAGTAGTACTTTATTGA

mRNA sequence

ATGGCATCTCTTCCACATCTCCCCCTTCCTCAACAAGCTATCTCATACCTAAGTCTGCTGTTTCTCCTGCACGTTCTACCGATCACCATATCACAAGGTCCAACCATATCAACTCCCACCATAGCTCAATGCACGACGAGTATTCTTCCATTGGCTTCTTGTGCACCTTTTGTGCAAGGTGTAACACCAACACCACCTATGGGATGCTGTGATAACCTGAAACAACTCTACAACGTTGTCCCTAACTGCCTTTGCCTCTTGCTGAATGGCACTAACTTAAGCTCTTTCCCTATCAACACTACTAGAGCCCTCCAGCTGCCTGATATTTGCAGCCTTCAAGTTAACATCTCCACTTGTTCAGCTCTCCTTGGGCCACCTAGTCCACCCAGTTCTCATGTTCCTCCTAGAGTACACATCAACTCCACAATTAGCAATGCTACGGTTCTAGCTTCTCCAATGACTCAACCAACACCAAAACCTAGCATTGTGGGTTTAGGATTGGGCAAGATCAGTGCTAGTTTCAAATTAAAGGGAGGAATTCAGCTCACAGTAGTGATAACAATAAGCACTTTTCTGTTTCTAGTAGTACTTTATTGA

Coding sequence (CDS)

ATGGCATCTCTTCCACATCTCCCCCTTCCTCAACAAGCTATCTCATACCTAAGTCTGCTGTTTCTCCTGCACGTTCTACCGATCACCATATCACAAGGTCCAACCATATCAACTCCCACCATAGCTCAATGCACGACGAGTATTCTTCCATTGGCTTCTTGTGCACCTTTTGTGCAAGGTGTAACACCAACACCACCTATGGGATGCTGTGATAACCTGAAACAACTCTACAACGTTGTCCCTAACTGCCTTTGCCTCTTGCTGAATGGCACTAACTTAAGCTCTTTCCCTATCAACACTACTAGAGCCCTCCAGCTGCCTGATATTTGCAGCCTTCAAGTTAACATCTCCACTTGTTCAGCTCTCCTTGGGCCACCTAGTCCACCCAGTTCTCATGTTCCTCCTAGAGTACACATCAACTCCACAATTAGCAATGCTACGGTTCTAGCTTCTCCAATGACTCAACCAACACCAAAACCTAGCATTGTGGGTTTAGGATTGGGCAAGATCAGTGCTAGTTTCAAATTAAAGGGAGGAATTCAGCTCACAGTAGTGATAACAATAAGCACTTTTCTGTTTCTAGTAGTACTTTATTGA

Protein sequence

MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQGVTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCSALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLKGGIQLTVVITISTFLFLVVLY*

Homology

[Close]

BLAST of Cucsa.199000 vs. Swiss-Prot
Match: YLS3_ARATH (Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.3e-12
Identity = 43/134 (32.09%), Postives = 68/134 (50.75%), Query Frame = 1


Query: 43  QCTTSILPLASCAPFVQGVTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLS--SFPINT 102
           +CT  ++ +A+C P+VQG   +P   CC  LKQ+ N    CLC+++   N       +N 
Sbjct: 35  ECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERNDPDLGLQVNV 94

Query: 103 TRALQLPDICSLQVNISTCSALLG-PPSPPSSHVPPRV--HINSTISNATVLASPMTQPT 162
           + AL LP +C    +I+ C ALL   P+ P + V  ++   +N T+S A+      ++PT
Sbjct: 95  SLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQLAKGLNETVS-ASAPTGSASEPT 154

Query: 163 PKPSIVGLGLGKIS 172
              S  G   G  S
Sbjct: 155 SMSSTPGSSAGNNS 167

[Close]

BLAST of Cucsa.199000 vs. TrEMBL
Match: A0A0A0LSN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G022510 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.1e-100
Identity = 185/196 (94.39%), Postives = 190/196 (96.94%), Query Frame = 1


Query: 1   MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG 60
           MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG
Sbjct: 1   MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG 60

Query: 61  VTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCS 120
           VTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCS
Sbjct: 61  VTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCS 120

Query: 121 ALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLKGGI 180
           ALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLKGGI
Sbjct: 121 ALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLKGGI 180

Query: 181 QLTVVITISTFLFLVV 197
           QLT +  +  F+ L++
Sbjct: 181 QLTQLAVMFFFIRLLL 196

[Close]

BLAST of Cucsa.199000 vs. TrEMBL
Match: M5WTE9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025857mg PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.0e-48
Identity = 112/188 (59.57%), Postives = 134/188 (71.28%), Query Frame = 1


Query: 1   MASLPHLPLPQQ--AISYLSLL-FLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPF 60
           MASL H  L Q   A+S L+LL FL+ + P  +SQ P+ S+PTIAQCTT +LPLASCA F
Sbjct: 1   MASL-HSSLLQHPFALSSLTLLLFLISLPPSILSQDPSSSSPTIAQCTTRLLPLASCASF 60

Query: 61  VQGVTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNIS 120
           VQG + +P   CCDNLK LY+  P+CLCLLLN T LSSFPINTTRALQLP +CSLQV+IS
Sbjct: 61  VQGTSQSPAQSCCDNLKLLYSQQPDCLCLLLNSTTLSSFPINTTRALQLPALCSLQVDIS 120

Query: 121 TCSALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKI-SASFKL 180
            CS +  PPS PSS V    + NST  N+T+ ASPM    P+PS++GLG G+  SA  KL
Sbjct: 121 ACSGVHVPPSTPSSQVSFGTNTNSTAVNSTIAASPMPLNAPRPSMMGLGFGRTSSAGTKL 180

Query: 181 KGGIQLTV 185
           K G  LTV
Sbjct: 181 KMGSYLTV 187

[Close]

BLAST of Cucsa.199000 vs. TrEMBL
Match: D7SIY1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g03830 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-38
Identity = 91/179 (50.84%), Postives = 118/179 (65.92%), Query Frame = 1


Query: 9   LPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQGVTPTPPMG 68
           LP  AI+ L LL L+ ++P  +SQ PT S  TIAQC+  +LPLASC  +VQG  PTP   
Sbjct: 6   LPPTAITSLVLL-LITLIPSALSQNPTTSGSTIAQCSLRLLPLASCGSYVQGSAPTPVQS 65

Query: 69  CCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCS-ALLGPPS 128
           CCDNLKQ+Y+  PNCLCLLLN T + SFPIN T ALQLP +C+LQV+IS CS  +  PPS
Sbjct: 66  CCDNLKQVYSQQPNCLCLLLNSTVMGSFPINRTLALQLPLVCNLQVSISPCSEGMTVPPS 125

Query: 129 PPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISA-SFKLKGGIQLTVV 186
            P S V      NST++     ASP+    P+PSI+G G G+ S+   ++KG + + V+
Sbjct: 126 SPDSQVSLGEGTNSTVA-----ASPVVAVAPRPSIMGFGFGRSSSMRLEVKGDLAVAVI 178

[Close]

BLAST of Cucsa.199000 vs. TrEMBL
Match: A0A067JKV1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05878 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-36
Identity = 99/198 (50.00%), Postives = 117/198 (59.09%), Query Frame = 1


Query: 1   MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTS-ILPLASCAPFVQ 60
           MASL     P   I+  SL FLL +   T S       P IA C+   ILPL  CAPFVQ
Sbjct: 1   MASL----YPNSPIAVASLCFLLFISLPTKSFS---QDPQIADCSPQLILPLTPCAPFVQ 60

Query: 61  GVTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTC 120
           G   +PP  CC+NLKQLY   P CLCLLLN TN +SFPIN T ALQLP +C +QVNIS C
Sbjct: 61  GTAQSPPPTCCENLKQLYLQQPGCLCLLLNDTNFTSFPINRTLALQLPVLCHIQVNISAC 120

Query: 121 SAL-LGPPSPPSSHVPPRVHINSTIS---NATVLASPMTQPTPKPSIVGLGLGKISASFK 180
           S L   P S P+S V P    NS+     N+T+ ASPM Q  P+P I+GLGLG+ +A  K
Sbjct: 121 SGLPQVPTSSPTSQVSPGAQTNSSSERHINSTIAASPMIQVAPRPVIMGLGLGRSAAGIK 180

Query: 181 LKG-GIQLTVVITISTFL 193
           LK  G  + + I  S  L
Sbjct: 181 LKAEGFMVLLAILASILL 191

[Close]

BLAST of Cucsa.199000 vs. TrEMBL
Match: B9N091_POPTR (Protease inhibitor/seed storage/lipid transfer family protein OS=Populus trichocarpa GN=POPTR_0015s06360g PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-36
Identity = 93/197 (47.21%), Postives = 122/197 (61.93%), Query Frame = 1


Query: 1   MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTIST-PTIAQCTTSILPLASCAPFVQ 60
           MASL   P P  AI+ L LL L+ + P  +SQ P I T PT+  CT  +LPLA CAPFVQ
Sbjct: 1   MASLYSEP-PTIAITSLVLLLLISLPPTILSQNPPIPTDPTVTDCTPRLLPLAPCAPFVQ 60

Query: 61  GVTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTC 120
           G+  TP   CCDNL QLY   P C+CLLL  TNLSSFPIN T AL+LP +C++Q+NI+ C
Sbjct: 61  GIAQTPVQPCCDNLNQLYQEQPGCICLLLEDTNLSSFPINRTLALELPALCNVQINIAAC 120

Query: 121 SALLGPP----SPPSSHVPPRVHINSTISNAT---VLASPMTQPTPKPSIVGLGLGKISA 180
           S   G P    SPP+S V P    NS++   T     ASP+ +  P+ SI+G+G  + S 
Sbjct: 121 S---GTPQVLSSPPASQVYPGAPSNSSVGRHTDYSFAASPVVEGEPRSSIMGIGFHR-ST 180

Query: 181 SFKLKGGIQLTVVITIS 190
             KL+    L +++T++
Sbjct: 181 GVKLEAEGSLMLLVTLA 192

[Close]

BLAST of Cucsa.199000 vs. TAIR10
Match: AT1G73890.1 (AT1G73890.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 67/154 (43.51%), Postives = 86/154 (55.84%), Query Frame = 1


Query: 42  AQCTTSILPLASCAPFVQGVTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSS--FPIN 101
           A C + +L LA C PFVQG    P   CCD+L Q+Y+    CLCL LN T+  S  FPIN
Sbjct: 28  ATCASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIYSQEATCLCLFLNNTSTLSPAFPIN 87

Query: 102 TTRALQLPDICSLQVNISTCSALLGPPSPPSSH---VPPRVHINSTIS-----NATVLAS 161
            T ALQLP +C++  N STCS+     +P  S     PP     S IS     N+ V A+
Sbjct: 88  QTLALQLPPLCNIPANSSTCSSSFPGEAPSDSSSVAPPPSSSTGSQISQGAKNNSRVAAT 147

Query: 162 PMTQPTPKP-SIVGLGLGKISASFKLKGGIQLTV 185
           P+ Q  P+P S +GLG G  S+  K +  IQLT+
Sbjct: 148 PVAQMAPRPTSFMGLGYGLKSSGSKSE--IQLTI 179

[Close]

BLAST of Cucsa.199000 vs. TAIR10
Match: AT2G44290.1 (AT2G44290.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 72.4 bits (176), Expect = 3.5e-13
Identity = 43/134 (32.09%), Postives = 68/134 (50.75%), Query Frame = 1


Query: 43  QCTTSILPLASCAPFVQGVTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLS--SFPINT 102
           +CT  ++ +A+C P+VQG   +P   CC  LKQ+ N    CLC+++   N       +N 
Sbjct: 35  ECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERNDPDLGLQVNV 94

Query: 103 TRALQLPDICSLQVNISTCSALLG-PPSPPSSHVPPRV--HINSTISNATVLASPMTQPT 162
           + AL LP +C    +I+ C ALL   P+ P + V  ++   +N T+S A+      ++PT
Sbjct: 95  SLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQLAKGLNETVS-ASAPTGSASEPT 154

Query: 163 PKPSIVGLGLGKIS 172
              S  G   G  S
Sbjct: 155 SMSSTPGSSAGNNS 167

[Close]

BLAST of Cucsa.199000 vs. TAIR10
Match: AT2G44300.1 (AT2G44300.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 6.7e-12
Identity = 33/94 (35.11%), Postives = 51/94 (54.26%), Query Frame = 1


Query: 43  QCTTSILPLASCAPFVQGVTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLS--SFPINT 102
           +CT  ++ +A+C P+VQG   +P   CC  LKQ+ N    CLC+++   N       IN 
Sbjct: 34  ECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRNDPDLGLQINV 93

Query: 103 TRALQLPDICSLQVNISTCSALLG-PPSPPSSHV 134
           + AL LP +C    +++ C ALL   P+ P + V
Sbjct: 94  SLALALPSVCHAAADVTKCPALLHLDPNSPDAQV 127

[Close]

BLAST of Cucsa.199000 vs. TAIR10
Match: AT1G36150.1 (AT1G36150.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 3.7e-10
Identity = 41/136 (30.15%), Postives = 61/136 (44.85%), Query Frame = 1


Query: 31  SQGPTISTPTIAQCTTSILPLASCAPF--VQGVTPTPPMGCCDNLKQLYNVVPNCLCLLL 90
           S  PT        C++ I  +  C  F  V    P+P   CC  +K + N  P CLC  L
Sbjct: 32  SMAPTPQPSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSAL 91

Query: 91  NGTNLSSFPINTTRALQLPDICSLQV----NISTCSALLGPPSPPSSHVPPRVHINSTIS 150
             +    F ++ T+AL +P IC++ +    ++ST +A   P SPP     P    +S  S
Sbjct: 92  ESSREMGFVLDDTKALAMPKICNVPIDPNCDVSTPAAST-PVSPPVE--SPTTSPSSAKS 151

Query: 151 NATVLASPMTQPTPKP 161
            A   +SP    +P P
Sbjct: 152 PAITPSSPAVSHSPPP 164

[Close]

BLAST of Cucsa.199000 vs. TAIR10
Match: AT1G73560.1 (AT1G73560.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 5.3e-09
Identity = 29/94 (30.85%), Postives = 45/94 (47.87%), Query Frame = 1


Query: 39  PTIAQCTTSILPLASCAPFVQGVTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTN-LSSFP 98
           P +  C   +LP   C P++  + P PP  CC  +K++      CLC+  N    L +  
Sbjct: 28  PQLTACLQKLLP---CQPYIHSLNPPPPPSCCGPMKEIVEKDAPCLCIAFNNPEVLKALN 87

Query: 99  INTTRALQLPDICSLQVNISTCSALLGPPSPPSS 132
           +    AL LP  C +  ++S CS  +  PSP +S
Sbjct: 88  LTKENALLLPKACGVNPDVSLCSK-IATPSPIAS 117

[Close]

BLAST of Cucsa.199000 vs. NCBI nr
Match: gi|778656326|ref|XP_004138342.2| (PREDICTED: protein YLS3 [Cucumis sativus])

HSP 1 Score: 398.3 bits (1022), Expect = 8.0e-108
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1


Query: 1   MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG 60
           MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG
Sbjct: 34  MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG 93

Query: 61  VTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCS 120
           VTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCS
Sbjct: 94  VTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCS 153

Query: 121 ALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLKGGI 180
           ALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLKGGI
Sbjct: 154 ALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLKGGI 213

Query: 181 QLTVVITISTFLFLVVLY 199
           QLTVVITISTFLFLVVLY
Sbjct: 214 QLTVVITISTFLFLVVLY 231

[Close]

BLAST of Cucsa.199000 vs. NCBI nr
Match: gi|659106647|ref|XP_008453387.1| (PREDICTED: protein YLS3 [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 5.0e-102
Identity = 187/198 (94.44%), Postives = 193/198 (97.47%), Query Frame = 1


Query: 1   MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG 60
           MASLP+LPLPQ AISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG
Sbjct: 1   MASLPYLPLPQLAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG 60

Query: 61  VTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCS 120
           VTPTPPMGCCDNLKQLYN+VPNCLCLLLN TNLSSFPINTTRALQLPD+CSLQVNISTCS
Sbjct: 61  VTPTPPMGCCDNLKQLYNIVPNCLCLLLNDTNLSSFPINTTRALQLPDLCSLQVNISTCS 120

Query: 121 ALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLKGGI 180
           ALLG PSPPSSHVPPRVHINSTISNATVLASP+TQPTPKPSIVGLGLGKISASFKL+GGI
Sbjct: 121 ALLGSPSPPSSHVPPRVHINSTISNATVLASPVTQPTPKPSIVGLGLGKISASFKLRGGI 180

Query: 181 QLTVVITISTFLFLVVLY 199
           QLT VI I+TFLFLVVLY
Sbjct: 181 QLTAVIAITTFLFLVVLY 198

[Close]

BLAST of Cucsa.199000 vs. NCBI nr
Match: gi|700208716|gb|KGN63812.1| (hypothetical protein Csa_1G022510 [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 1.6e-100
Identity = 185/196 (94.39%), Postives = 190/196 (96.94%), Query Frame = 1


Query: 1   MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG 60
           MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG
Sbjct: 1   MASLPHLPLPQQAISYLSLLFLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQG 60

Query: 61  VTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCS 120
           VTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCS
Sbjct: 61  VTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCS 120

Query: 121 ALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLKGGI 180
           ALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLKGGI
Sbjct: 121 ALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKISASFKLKGGI 180

Query: 181 QLTVVITISTFLFLVV 197
           QLT +  +  F+ L++
Sbjct: 181 QLTQLAVMFFFIRLLL 196

[Close]

BLAST of Cucsa.199000 vs. NCBI nr
Match: gi|645270140|ref|XP_008240321.1| (PREDICTED: protein YLS3 [Prunus mume])

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-48
Identity = 109/189 (57.67%), Postives = 134/189 (70.90%), Query Frame = 1


Query: 13  AISYLSLL-FLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPFVQGVTPTPPMGCCD 72
           A+S L+LL FL+ +LP  +SQ P+ S+PTIAQCTT +LPLASCA FVQG + +P   CCD
Sbjct: 14  ALSSLTLLLFLISLLPSILSQDPSSSSPTIAQCTTRLLPLASCASFVQGTSQSPAQSCCD 73

Query: 73  NLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNISTCSALLGPPSPPSS 132
           NLK LY+  P+CLCLLLN T LSSFPINTTRALQLP +CSLQV+IS CS +  PPS PSS
Sbjct: 74  NLKLLYSQQPDCLCLLLNDTTLSSFPINTTRALQLPALCSLQVDISACSGVHVPPSTPSS 133

Query: 133 HVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKI-SASFKLKGGIQL-TVVITIS 192
            V    + NST  N+T+ ASPM Q  P+PS++GLG G+  SA  KLK G  L    + + 
Sbjct: 134 QVSFGTNTNSTAINSTIAASPMPQNAPRPSMMGLGFGRTSSAGTKLKMGSYLKAAALAMG 193

Query: 193 TFLFLVVLY 199
            FL   VL+
Sbjct: 194 GFLVTGVLF 202

[Close]

BLAST of Cucsa.199000 vs. NCBI nr
Match: gi|595845074|ref|XP_007208861.1| (hypothetical protein PRUPE_ppa025857mg, partial [Prunus persica])

HSP 1 Score: 199.1 bits (505), Expect = 7.1e-48
Identity = 112/188 (59.57%), Postives = 134/188 (71.28%), Query Frame = 1


Query: 1   MASLPHLPLPQQ--AISYLSLL-FLLHVLPITISQGPTISTPTIAQCTTSILPLASCAPF 60
           MASL H  L Q   A+S L+LL FL+ + P  +SQ P+ S+PTIAQCTT +LPLASCA F
Sbjct: 1   MASL-HSSLLQHPFALSSLTLLLFLISLPPSILSQDPSSSSPTIAQCTTRLLPLASCASF 60

Query: 61  VQGVTPTPPMGCCDNLKQLYNVVPNCLCLLLNGTNLSSFPINTTRALQLPDICSLQVNIS 120
           VQG + +P   CCDNLK LY+  P+CLCLLLN T LSSFPINTTRALQLP +CSLQV+IS
Sbjct: 61  VQGTSQSPAQSCCDNLKLLYSQQPDCLCLLLNSTTLSSFPINTTRALQLPALCSLQVDIS 120

Query: 121 TCSALLGPPSPPSSHVPPRVHINSTISNATVLASPMTQPTPKPSIVGLGLGKI-SASFKL 180
            CS +  PPS PSS V    + NST  N+T+ ASPM    P+PS++GLG G+  SA  KL
Sbjct: 121 ACSGVHVPPSTPSSQVSFGTNTNSTAVNSTIAASPMPLNAPRPSMMGLGFGRTSSAGTKL 180

Query: 181 KGGIQLTV 185
           K G  LTV
Sbjct: 181 KMGSYLTV 187

The following BLAST results are available for this feature:

BLAST of Cucsa.199000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YLS3_ARATH	6.3e-12	32.09	Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1	[more]

BLAST of Cucsa.199000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSN1_CUCSA	1.1e-100	94.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G022510 PE=4 SV=1	[more]
M5WTE9_PRUPE	5.0e-48	59.57	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025857mg PE=4 S...	[more]
D7SIY1_VITVI	2.1e-38	50.84	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g03830 PE=4 SV=...	[more]
A0A067JKV1_JATCU	1.1e-36	50.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05878 PE=4 SV=1	[more]
B9N091_POPTR	1.5e-36	47.21	Protease inhibitor/seed storage/lipid transfer family protein OS=Populus trichoc...	[more]

BLAST of Cucsa.199000 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73890.1	1.2e-24	43.51	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G44290.1	3.5e-13	32.09	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G44300.1	6.7e-12	35.11	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G36150.1	3.7e-10	30.15	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G73560.1	5.3e-09	30.85	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of Cucsa.199000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778656326\|ref\|XP_004138342.2\|	8.0e-108	100.00	PREDICTED: protein YLS3 [Cucumis sativus]	[more]
gi\|659106647\|ref\|XP_008453387.1\|	5.0e-102	94.44	PREDICTED: protein YLS3 [Cucumis melo]	[more]
gi\|700208716\|gb\|KGN63812.1\|	1.6e-100	94.39	hypothetical protein Csa_1G022510 [Cucumis sativus]	[more]
gi\|645270140\|ref\|XP_008240321.1\|	1.4e-48	57.67	PREDICTED: protein YLS3 [Prunus mume]	[more]
gi\|595845074\|ref\|XP_007208861.1\|	7.1e-48	59.57	hypothetical protein PRUPE_ppa025857mg, partial [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.199000.1	Cucsa.199000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 37..119 score: 1.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 44..119 score: 3.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 43..119 score: 1.25
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 43..119 score: 2.7
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 18..197 score: 2.5
None	No IPR available	PANTHER	PTHR33044:SF5	PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN FAMILY PROTEIN	coord: 18..197 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.199000	Cla018982	Watermelon (97103) v1	cgywmB390
Cucsa.199000	Csa1G022510	Cucumber (Chinese Long) v2	cgycuB299
Cucsa.199000	MELO3C017299	Melon (DHL92) v3.5.1	cgymeB364
Cucsa.199000	ClCG06G014900	Watermelon (Charleston Gray)	cgywcgB368
Cucsa.199000	CSPI01G03720	Wild cucumber (PI 183967)	cgycpiB310
Cucsa.199000	CmaCh10G002410	Cucurbita maxima (Rimu)	cgycmaB0575
Cucsa.199000	CmoCh10G002550	Cucurbita moschata (Rifu)	cgycmoB0577
Cucsa.199000	Lsi06G013390	Bottle gourd (USVL1VR-Ls)	cgylsiB342
Cucsa.199000	Cp4.1LG18g07420	Cucurbita pepo (Zucchini)	cgycpeB0555
Cucsa.199000	Bhi01G002712	Wax gourd	cgywgoB407
Cucsa.199000	Carg17916	Silver-seed gourd	carcgyB0532

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.199000	Silver-seed gourd	carcgyB0455
Cucsa.199000	Silver-seed gourd	carcgyB0590
Cucsa.199000	Silver-seed gourd	carcgyB0673
Cucsa.199000	Silver-seed gourd	carcgyB1158
Cucsa.199000	Cucumber (Chinese Long) v3	cgycucB314
Cucsa.199000	Cucumber (Chinese Long) v3	cgycucB315
Cucsa.199000	Cucumber (Chinese Long) v3	cgycucB320
Cucsa.199000	Watermelon (97103) v2	cgywmbB365
Cucsa.199000	Watermelon (97103) v2	cgywmbB367
Cucsa.199000	Watermelon (97103) v2	cgywmbB370
Cucsa.199000	Wax gourd	cgywgoB413
Cucsa.199000	Cucumber (Gy14) v1	cgycgyB114
Cucsa.199000	Cucurbita maxima (Rimu)	cgycmaB0577
Cucsa.199000	Cucurbita maxima (Rimu)	cgycmaB0587
Cucsa.199000	Cucurbita maxima (Rimu)	cgycmaB0590
Cucsa.199000	Cucurbita moschata (Rifu)	cgycmoB0578
Cucsa.199000	Cucurbita moschata (Rifu)	cgycmoB0589
Cucsa.199000	Wild cucumber (PI 183967)	cgycpiB316
Cucsa.199000	Cucumber (Chinese Long) v2	cgycuB304
Cucsa.199000	Melon (DHL92) v3.5.1	cgymeB358
Cucsa.199000	Watermelon (Charleston Gray)	cgywcgB365
Cucsa.199000	Watermelon (97103) v1	cgywmB383
Cucsa.199000	Watermelon (97103) v1	cgywmB388
Cucsa.199000	Cucurbita pepo (Zucchini)	cgycpeB0564
Cucsa.199000	Cucurbita pepo (Zucchini)	cgycpeB0558
Cucsa.199000	Bottle gourd (USVL1VR-Ls)	cgylsiB334
Cucsa.199000	Bottle gourd (USVL1VR-Ls)	cgylsiB340
Cucsa.199000	Melon (DHL92) v3.6.1	cgymedB359
Cucsa.199000	Melon (DHL92) v3.6.1	cgymedB353