Cucsa.198710 (gene) Cucumber (Gy14) v1

NameCucsa.198710
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold01357 : 1676726 .. 1677780 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCcTATAAACTGAAATGCAAGAATGAGCAAAATGAAGAAAATGACATTGCTTCTTCAAAaTGCCACCATAAAAGGTTAAAACAGCGAACCGAACAAGCAACAGGATGCTCTACTTTTGGATATTTCAACATCTGAAAAAGTGGGAAAGTTTCTTCGCAGAAAGCATCAAAAaCACAGAATTACAGTTCATAAGAATCTTTGCAGAGTAATTTCCAAATTCATAATCAATGGAAACTTATGAAAAAAaCCCAAATAGTTAAAGCAATGTATTTATTTGCCCCATCAAGACATAGCAATTCCCGTAACCTTGTTAGGAATTGTATTTCATCATATAAGACCAAATGGACAGGAAAAGACACTTGCATAAACACCTATCGAAACAGCTAGCTAAGAATGGTTCTACTTGTGTCTAATCTAATCCAGAACATATAAGCCAGTAAAATGAGAGTCAGAAAAGAGCAAGTTTGAATTGAAAAACAAGCAGGgAAATTTGTTAATCAGCAGAAGAATAAAAAACTGAGTGTCTGTTCAAGAACCAAGAGATGACATATATTGAACAAAATCAAGAAAAGCAAGCAAAGGGAAGGATAAACAAGCAAAAAATCAATATCATCCAGTTAATTTGAATACAGCATTCCGTTAAATCCCTATGATCCTATCCCATTGGATAATACCATCTGATTGGTGGAAAGATTTAGAGCTGCAAACAAACCAACCAAACAATCCAAGTTAAACCATGACTTGCCAACAATCCCTTTATTCTTATCCACATCCATATATCTGTAACTAGCTAGATTGAAGGGGAAAAAAAAaTAGTCAGTTTCGAAGAAAATCACACTACAAAACAAAATCTTCTTCAATTTTTTCTCAAAGTGAAATTCCCATCTTCCACAAAGAAGAAACAGGAAGAAAATTTTCGTTATCCCCTTGACCCTTATGTCTAATTAATCAAAAGATGCAGACAGAAACACAAAGGGGTCCCAGATGGTCAAAGAAACGAACTAAAATAGAGGATCACTTTTTTCCCAGTTATCCTAAAATTTAATCGAACATC

mRNA sequence

CCCCTATAAACTGAAATGCAAGAATGAGCAAAATGAAGAAAATGACATTGCTTCTTCAAAATGCCACCATAAAAGGTTAAAACAGCGAACCGAACAAGCAACAGGATGCTCTACTTTTGGATATTTCAACATCTGAAAAAGTGGGAAAGTTTCTTCGCAGAAAGCATCAAAAACACAGAATTACAGTTCATAAGAATCTTTGCAGAGTAATTTCCAAATTCATAATCAATGGAAACTTATGAAAAAAACCCAAATAGTTAAAGCAATGTATTTATTTGCCCCATCAAGACATAGCAATTCCCGTAACCTTGTTAGGAATTGTATTTCATCATATAAGACCAAATGGACAGGAAAAGACACTTGCATAAACACCTATCGAAACAGCTAGCTAAGAATGGTTCTACTTGTGTCTAATCTAATCCAGAACATATAAGCCAGTAAAATGAGAGTCAGAAAAGAGCAAGTTTGAATTGAAAAACAAGCAGGGAAATTTGTTAATCAGCAGAAGAATAAAAAACTGAGTGTCTGTTCAAGAACCAAGAGATGACATATATTGAACAAAATCAAGAAAAGCAAGCAAAGGGAAGGATAAACAAGCAAAAAATCAATATCATCCAGTTAATTTGAATACAGCATTCCGTTAAATCCCTATGATCCTATCCCATTGGATAATACCATCTGATTGGTGGAAAGATTTAGAGCTGCAAACAAACCAACCAAACAATCCAAGTTAAACCATGACTTGCCAACAATCCCTTTATTCTTATCCACATCCATATATCTGTAACTAGCTAGATTGAAGGGGAAAAAAAAATAGTCAGTTTCGAAGAAAATCACACTACAAAACAAAATCTTCTTCAATTTTTTCTCAAAGTGAAATTCCCATCTTCCACAAAGAAGAAACAGGAAGAAAATTTTCGTTATCCCCTTGACCCTTATGTCTAATTAATCAAAAGATGCAGACAGAAACACAAAGGGGTCCCAGATGGTCAAAGAAACGAACTAAAATAGAGGATCACTTTTTTCCCAGTTATCCTAAAATTTAATCGAACATC

Coding sequence (CDS)

ATGAAAAAAaCCCAAATAGTTAAAGCAATGTATTTATTTGCCCCATCAAGACATAGCAATTCCCGTAACCTTGTTAGGAATTGTATTTCATCATATAAGACCAAATGGACAGGAAAAGACACTTGCATAAACACCTATCGAAACAGCTAG

Protein sequence

MKKTQIVKAMYLFAPSRHSNSRNLVRNCISSYKTKWTGKDTCINTYRNS*
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.198710.1Cucsa.198710.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.198710Melon (DHL92) v3.6.1cgymedB359
Cucsa.198710Silver-seed gourdcarcgyB0455
Cucsa.198710Silver-seed gourdcarcgyB0532
Cucsa.198710Silver-seed gourdcarcgyB0590
Cucsa.198710Silver-seed gourdcarcgyB0672
Cucsa.198710Silver-seed gourdcarcgyB0673
Cucsa.198710Cucumber (Chinese Long) v3cgycucB314
Cucsa.198710Cucumber (Chinese Long) v3cgycucB315
Cucsa.198710Watermelon (97103) v2cgywmbB365
Cucsa.198710Watermelon (97103) v2cgywmbB370
Cucsa.198710Wax gourdcgywgoB409
Cucsa.198710Wax gourdcgywgoB419
Cucsa.198710Cucumber (Gy14) v1cgycgyB114
Cucsa.198710Cucurbita maxima (Rimu)cgycmaB0575
Cucsa.198710Cucurbita maxima (Rimu)cgycmaB0577
Cucsa.198710Cucurbita maxima (Rimu)cgycmaB0580
Cucsa.198710Cucurbita maxima (Rimu)cgycmaB0587
Cucsa.198710Cucurbita moschata (Rifu)cgycmoB0577
Cucsa.198710Cucurbita moschata (Rifu)cgycmoB0578
Cucsa.198710Cucurbita moschata (Rifu)cgycmoB0580
Cucsa.198710Cucurbita moschata (Rifu)cgycmoB0587
Cucsa.198710Wild cucumber (PI 183967)cgycpiB310
Cucsa.198710Cucumber (Chinese Long) v2cgycuB299
Cucsa.198710Melon (DHL92) v3.5.1cgymeB364
Cucsa.198710Melon (DHL92) v3.5.1cgymeB358
Cucsa.198710Watermelon (Charleston Gray)cgywcgB366
Cucsa.198710Watermelon (Charleston Gray)cgywcgB368
Cucsa.198710Watermelon (97103) v1cgywmB388
Cucsa.198710Watermelon (97103) v1cgywmB390
Cucsa.198710Cucurbita pepo (Zucchini)cgycpeB0562
Cucsa.198710Cucurbita pepo (Zucchini)cgycpeB0554
Cucsa.198710Cucurbita pepo (Zucchini)cgycpeB0555
Cucsa.198710Cucurbita pepo (Zucchini)cgycpeB0564
Cucsa.198710Cucurbita pepo (Zucchini)cgycpeB0558
Cucsa.198710Bottle gourd (USVL1VR-Ls)cgylsiB334
Cucsa.198710Bottle gourd (USVL1VR-Ls)cgylsiB341
Cucsa.198710Bottle gourd (USVL1VR-Ls)cgylsiB342