Cucsa.197260 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.cTTTCTTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTttCTCCCCATGGCGACGGTTCCTGATCTCTTCCGCCGCAACGGACTTGTTGGGTTTTCCGACGAGTCGAAACAGAGGAGTTCCGGTTCCACTCAGCTTCATGTTCTTGCTGTTGATGATAGTTTTGTTGATCGGAAGGTTATTGAGCGGTTGTTGAAGAGTTCGTCATGTGAAGGTATAGATTGTTGTCGATGATTGTTTTTGTTTAATGCGTTGATTTTCGATGGGGTTTGTTTGAATTGGATTTGGTTTTTTTtGTTCTTTTtCTTTTGCAGTGACTGTTGTTGAGAGTGGGAGAAGTGCTCTTCAGTATTTGGGTTTGGATGGGGAAACTAACTCTGTTCAGTTTAGTAGTGTAAGAAAATTTTCCCTTCATTTTAGTAATCGTTTGTTTAAGTCGAAATGTTGTTTGATCTTGAATTGATGATTAGTTGTTGGGTTTTGTGTTGATTTATTGCTTTCAGGCTTTGAAGGTGAATCTCATTATTACAGATTACTCCATGCCTGAAATGACAGGATATGAACTGCTCAAGAAGATCAAGGTTGGTTTCTTGGTTGATTGACTTGTTTTTTGTTCTTCTCATTCTTTCTAAAAAAAaTTGGTTCTTAGTTTTTGAAAGTTTCGTCCACTTCTAGATTTGTTGCTTTGTTACCCACTTGTTACCCAAGTTGAAGGAAAAAAAaCAAGCCAAAGTTTTGTTCTTCCAATTTGGCTAAGAATGAACTCTGTTAGTAAACCATTGTATGAAAATTGAGAGATACTGCACTTCGTATGTTATATCAATGGCTGAAAGAGGATTGTTATGAACAGGAATCATCAGCTTTCAGGGAGATTCCTGTTGTGATAATGTCATCAGAGAATATTATGGCTCGTATCGACAGGTATAGATACATTCTCCCTTCTCTCTTGTTCTTGGATTTACTTTTTCATGGTTAACTTTAAAGCTGAAGAATTGGGGTTTCATTTTTCTTATAGTTGTTTAAAGGAAGGGGCTGAAGAATTCATAGTAAAGCCAGTGAAACTGTCTGATGTGAAACGATTGAAAGATTTCATTATGGAAGGAGAAAATGGAGGGAAGAAAATTGATCTTAAGAGGAAACTCCATCTCAATCATGATCACAACCCATTGTCTCCAGCCTCTCCAACGCCGTCGATGACAGCAATCGACCAATGCCAAGGATTCAAGCAACGATCACCACCGTCGTTACGACCGTCCCCGATCATACATTCATCAAAGAAACCTAGGTTCCTCAATGGCAACTAATTCACATGATGGAATTCAAGTGGTAAAAGCTCTTTGTTCTTTTTGTATAAAAGTTGATTGGTGTTGTTGGAAACTCAAAATCCCACATTTGCTGTTTCTCTTTTtCTTTTTtGGTTCATTGCTGTTTCAAAGGTCTCAGAGAAGTAAAaGAAAAAAAaGTACATTGAAGTGTCAATGAAAACACAATAGACAAGTTTCGTAGCTCTGCTTGGTTGTTTGCTTTCTAGTTATGTTTTGATCTTATTGCCTGTGGCTATGCCATGAGGAGAGATTCGAACGTTCACAGTAATTAAACTCGACTCTTACATTGTACAGTGGATCGGGTCA CTTTCTTCTtctctctctctctctctctctctctctctctTTTCTCCCCATGGCGACGGTTCCTGATCTCTTCCGCCGCAACGGACTTGTTGGGTTTTCCGACGAGTCGAAACAGAGGAGTTCCGGTTCCACTCAGCTTCATGTTCTTGCTGTTGATGATAGTTTTGTTGATCGGAAGGTTATTGAGCGGTTGTTGAAGAGTTCGTCATGTGAAGTGACTGTTGTTGAGAGTGGGAGAAGTGCTCTTCAGTATTTGGGTTTGGATGGGGAAACTAACTCTGTTCAGTTTAGTAGTGCTTTGAAGGTGAATCTCATTATTACAGATTACTCCATGCCTGAAATGACAGGATATGAACTGCTCAAGAAGATCAAGGAATCATCAGCTTTCAGGGAGATTCCTGTTGTGATAATGTCATCAGAGAATATTATGGCTCGTATCGACAGTTGTTTAAAGGAAGGGGCTGAAGAATTCATAGTAAAGCCAGTGAAACTGTCTGATGTGAAACGATTGAAAGATTTCATTATGGAAGGAGAAAATGGAGGGAAGAAAATTGATCTTAAGAGGAAACTCCATCTCAATCATGATCACAACCCATTGTCTCCAGCCTCTCCAACGCCGTCGATGACAGCAATCGACCAATGCCAAGGATTCAAGCAACGATCACCACCGTCGTTACGACCGTCCCCGATCATACATTCATCAAAGAAACCTAGGTTCCTCAATGGCAACTAATTCACATGATGGAATTCAAGTGGTAAAAGCTCTTTGTTCTTTTTGTATAAAAGTTGATTGGTGTTGTTGGAAACTCAAAATCCCACATTTGCTGTTTCTCTTTTTCTTTTTTGGTTCATTGCTGTTTCAAAGGTCTCAGAGAAGTAAAAGAAAAAAAAGTACATTGAAGTGTCAATGAAAACACAATAGACAAGTTTCGTAGCTCTGCTTGGTTGTTTGCTTTCTAGTTATGTTTTGATCTTATTGCCTGTGGCTATGCCATGAGGAGAGATTCGAACGTTCACAGTAATTAAACTCGACTCTTACATTGTACAGTGGATCGGGTCA ATGGCGACGGTTCCTGATCTCTTCCGCCGCAACGGACTTGTTGGGTTTTCCGACGAGTCGAAACAGAGGAGTTCCGGTTCCACTCAGCTTCATGTTCTTGCTGTTGATGATAGTTTTGTTGATCGGAAGGTTATTGAGCGGTTGTTGAAGAGTTCGTCATGTGAAGTGACTGTTGTTGAGAGTGGGAGAAGTGCTCTTCAGTATTTGGGTTTGGATGGGGAAACTAACTCTGTTCAGTTTAGTAGTGCTTTGAAGGTGAATCTCATTATTACAGATTACTCCATGCCTGAAATGACAGGATATGAACTGCTCAAGAAGATCAAGGAATCATCAGCTTTCAGGGAGATTCCTGTTGTGATAATGTCATCAGAGAATATTATGGCTCGTATCGACAGTTGTTTAAAGGAAGGGGCTGAAGAATTCATAGTAAAGCCAGTGAAACTGTCTGATGTGAAACGATTGAAAGATTTCATTATGGAAGGAGAAAATGGAGGGAAGAAAATTGATCTTAAGAGGAAACTCCATCTCAATCATGATCACAACCCATTGTCTCCAGCCTCTCCAACGCCGTCGATGACAGCAATCGACCAATGCCAAGGATTCAAGCAACGATCACCACCGTCGTTACGACCGTCCCCGATCATACATTCATCAAAGAAACCTAGGTTCCTCAATGGCAACTAA MATVPDLFRRNGLVGFSDESKQRSSGSTQLHVLAVDDSFVDRKVIERLLKSSSCEVTVVESGRSALQYLGLDGETNSVQFSSALKVNLIITDYSMPEMTGYELLKKIKESSAFREIPVVIMSSENIMARIDSCLKEGAEEFIVKPVKLSDVKRLKDFIMEGENGGKKIDLKRKLHLNHDHNPLSPASPTPSMTAIDQCQGFKQRSPPSLRPSPIIHSSKKPRFLNGN*
BLAST of Cucsa.197260 vs. Swiss-Prot
Match: ARR15_ARATH (Two-component response regulator ARR15 OS=Arabidopsis thaliana GN=ARR15 PE=1 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.1e-52 Identity = 120/195 (61.54%), Postives = 138/195 (70.77%), Query Frame = 1
BLAST of Cucsa.197260 vs. Swiss-Prot
Match: ARR5_ARATH (Two-component response regulator ARR5 OS=Arabidopsis thaliana GN=ARR5 PE=1 SV=2) HSP 1 Score: 202.6 bits (514), Expect = 4.6e-51 Identity = 109/158 (68.99%), Postives = 126/158 (79.75%), Query Frame = 1
BLAST of Cucsa.197260 vs. Swiss-Prot
Match: ARR6_ARATH (Two-component response regulator ARR6 OS=Arabidopsis thaliana GN=ARR6 PE=1 SV=2) HSP 1 Score: 194.1 bits (492), Expect = 1.6e-48 Identity = 102/134 (76.12%), Postives = 116/134 (86.57%), Query Frame = 1
BLAST of Cucsa.197260 vs. Swiss-Prot
Match: ARR7_ARATH (Two-component response regulator ARR7 OS=Arabidopsis thaliana GN=ARR7 PE=1 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 2.8e-48 Identity = 105/154 (68.18%), Postives = 120/154 (77.92%), Query Frame = 1
BLAST of Cucsa.197260 vs. Swiss-Prot
Match: ARR3_ARATH (Two-component response regulator ARR3 OS=Arabidopsis thaliana GN=ARR3 PE=2 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.7e-45 Identity = 105/189 (55.56%), Postives = 136/189 (71.96%), Query Frame = 1
BLAST of Cucsa.197260 vs. TrEMBL
Match: A0A0A0LNZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G006300 PE=4 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 3.8e-121 Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 1
BLAST of Cucsa.197260 vs. TrEMBL
Match: A0A061FTQ3_THECC (Two-component response regulator ARR5 OS=Theobroma cacao GN=TCM_011962 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.3e-57 Identity = 136/225 (60.44%), Postives = 159/225 (70.67%), Query Frame = 1
BLAST of Cucsa.197260 vs. TrEMBL
Match: V7CB54_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G196300g PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 3.9e-57 Identity = 134/200 (67.00%), Postives = 155/200 (77.50%), Query Frame = 1
BLAST of Cucsa.197260 vs. TrEMBL
Match: F6GSX5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g07580 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 8.7e-57 Identity = 136/213 (63.85%), Postives = 155/213 (72.77%), Query Frame = 1
BLAST of Cucsa.197260 vs. TrEMBL
Match: V7CEP1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G196500g PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.9e-56 Identity = 133/201 (66.17%), Postives = 154/201 (76.62%), Query Frame = 1
BLAST of Cucsa.197260 vs. TAIR10
Match: AT1G74890.1 (AT1G74890.1 response regulator 15) HSP 1 Score: 208.0 bits (528), Expect = 6.2e-54 Identity = 120/195 (61.54%), Postives = 138/195 (70.77%), Query Frame = 1
BLAST of Cucsa.197260 vs. TAIR10
Match: AT3G48100.1 (AT3G48100.1 response regulator 5) HSP 1 Score: 202.6 bits (514), Expect = 2.6e-52 Identity = 109/158 (68.99%), Postives = 126/158 (79.75%), Query Frame = 1
BLAST of Cucsa.197260 vs. TAIR10
Match: AT5G62920.1 (AT5G62920.1 response regulator 6) HSP 1 Score: 194.1 bits (492), Expect = 9.2e-50 Identity = 102/134 (76.12%), Postives = 116/134 (86.57%), Query Frame = 1
BLAST of Cucsa.197260 vs. TAIR10
Match: AT1G19050.1 (AT1G19050.1 response regulator 7) HSP 1 Score: 193.4 bits (490), Expect = 1.6e-49 Identity = 105/154 (68.18%), Postives = 120/154 (77.92%), Query Frame = 1
BLAST of Cucsa.197260 vs. TAIR10
Match: AT1G59940.1 (AT1G59940.1 response regulator 3) HSP 1 Score: 184.1 bits (466), Expect = 9.6e-47 Identity = 105/189 (55.56%), Postives = 136/189 (71.96%), Query Frame = 1
BLAST of Cucsa.197260 vs. NCBI nr
Match: gi|449440724|ref|XP_004138134.1| (PREDICTED: two-component response regulator ARR5-like [Cucumis sativus]) HSP 1 Score: 442.2 bits (1136), Expect = 5.5e-121 Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 1
BLAST of Cucsa.197260 vs. NCBI nr
Match: gi|659105633|ref|XP_008453146.1| (PREDICTED: two-component response regulator ARR5-like [Cucumis melo]) HSP 1 Score: 417.5 bits (1072), Expect = 1.5e-113 Identity = 216/228 (94.74%), Postives = 219/228 (96.05%), Query Frame = 1
BLAST of Cucsa.197260 vs. NCBI nr
Match: gi|645268783|ref|XP_008239693.1| (PREDICTED: two-component response regulator ARR5-like [Prunus mume]) HSP 1 Score: 232.6 bits (592), Expect = 6.6e-58 Identity = 136/226 (60.18%), Postives = 160/226 (70.80%), Query Frame = 1
BLAST of Cucsa.197260 vs. NCBI nr
Match: gi|590662956|ref|XP_007036075.1| (Two-component response regulator ARR5 [Theobroma cacao]) HSP 1 Score: 231.1 bits (588), Expect = 1.9e-57 Identity = 136/225 (60.44%), Postives = 159/225 (70.67%), Query Frame = 1
BLAST of Cucsa.197260 vs. NCBI nr
Match: gi|593784679|ref|XP_007155380.1| (hypothetical protein PHAVU_003G196300g [Phaseolus vulgaris]) HSP 1 Score: 229.6 bits (584), Expect = 5.6e-57 Identity = 134/200 (67.00%), Postives = 155/200 (77.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |