BLAST of Cucsa.197050 vs. Swiss-Prot
Match:
RDR2_ARATH (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana GN=RDR2 PE=1 SV=1)
HSP 1 Score: 1370.9 bits (3547), Expect = 0.0e+00
Identity = 672/1116 (60.22%), Postives = 855/1116 (76.61%), Query Frame = 1
Query: 6 RSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKA 65
RST+++SNVP++ +A +LL FL LG D+VFA+EI T R NWK R RVQFTTLE K+
Sbjct: 9 RSTVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKS 68
Query: 66 KAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEE-RMSVLES 125
+A LS Q+ L+F T NLR S DDI+ RPV R ++ VL VGF +E R LE
Sbjct: 69 RAQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEK 128
Query: 126 WEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEE--KLNALLLKLKYA 185
W+GV+ WI+ E+RR+EFW+W +CYK+EV FE+I+ET C+ + +++A LLKLKY
Sbjct: 129 WDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYG 188
Query: 186 PRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQA 245
P+++K+++ ++A++F S RYR C ED+D++W+RTT+FS +S+G ST FC EV
Sbjct: 189 PKVFKRVT-VHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTM 248
Query: 246 SDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSG-LGSNLAYEVEYQLNSLVHMQK 305
DIFS P+Y+E + DG+ F S ++IVPL+ + LG YE+ +QLN+LVH QK
Sbjct: 249 LDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQK 308
Query: 306 ISLSAANQ-DLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPP 365
ISL AA+ +LI L + ++TAL +L++LHQ +CYDP+ F+KTQ+ + K P
Sbjct: 309 ISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPA 368
Query: 366 SSQKRLSN-NVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSK 425
S+ KRL+ N+M+C R VTPS+IY LGPELET+NYVVKNF+ + SDFMRVTFVEEDWSK
Sbjct: 369 SAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSK 428
Query: 426 LPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMF 485
LPA A++ + + G KP RT IY+R++++L +GI +G KRFEFLAFSASQLR NSVWMF
Sbjct: 429 LPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMF 488
Query: 486 ASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTD 545
AS++ +KAE+IR+WMGCF KIRSISKCAARMGQLFS+S QTL+V +DVE IPDIEV TD
Sbjct: 489 ASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTD 548
Query: 546 GIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDS 605
G DYCFSDGIGKISL+FA+QVA KCG++H+PSAFQIRYGGYKGVIAVDR+SFRKLSLRDS
Sbjct: 549 GADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDS 608
Query: 606 MLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDK 665
MLKF+S N+MLNVT+ +SMPC+LNREI LLSTLG++D FEA+Q L +L ML D+
Sbjct: 609 MLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDR 668
Query: 666 DVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPK 725
D ALNVL+ G +S N+LV+ML GY P+ EPYLSMML+ H+ + S+L+SRCRI VPK
Sbjct: 669 DAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPK 728
Query: 726 GRILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCL 785
GRIL+GC+DE GIL YGQVY +TLTK+EL++R+Q+YF IDE S+++GKVVVTKNPCL
Sbjct: 729 GRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPCL 788
Query: 786 HPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPP 845
HPGD+RVL+AI+ V EEKG +DC+IFPQKG RPH NECSGGDLDGD +F+SWDE +IP
Sbjct: 789 HPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPS 848
Query: 846 KTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAK 905
+ + PMDY G RPR+MDHDV LEEI KFFVDYMI+DTLG ISTAHLVHADR+P+KA S K
Sbjct: 849 EMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQK 908
Query: 906 CLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKS 965
CLELA LHS AVDFAKTGAPAEMP LKPREFPDF+ERF+KP YIS +V GKLYRA S
Sbjct: 909 CLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVKSS 968
Query: 966 IEQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDE 1025
+ Q + +E YD LE GFE+F+E A+ +++MY EK++ LM YYGA E+E
Sbjct: 969 LAQRKPE---AESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEE 1028
Query: 1026 ILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSC-DPLNRRMMASAWY 1085
IL G L+++ YL RDNR+YGDMKDRI LSVK+L KE WFE SC D ++ +ASAWY
Sbjct: 1029 ILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCEDEQQKKKLASAWY 1088
Query: 1086 HVTYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKR 1115
+VTY+P++ E + + SFPW V DVLL+IKA N++R
Sbjct: 1089 YVTYNPNHRDEKLTFLSFPWIVGDVLLDIKAENAQR 1120
BLAST of Cucsa.197050 vs. Swiss-Prot
Match:
RDR2_ORYSJ (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 PE=2 SV=1)
HSP 1 Score: 1099.0 bits (2841), Expect = 0.0e+00
Identity = 573/1117 (51.30%), Postives = 768/1117 (68.76%), Query Frame = 1
Query: 7 STLRVSNVPESAIAQDLLNFLNSKLG-PDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKA 66
++LRVSN+P SA+A +LL F +S + FA EI + W SRG G VQF + A A
Sbjct: 10 ASLRVSNIPPSAVAAELLAFFDSAVAVAGGAFACEIAAAHRGWLSRGHGTVQFGSAAAAA 69
Query: 67 KAMSLSVQNSLV-FGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMSVLES 126
A L+ L F L S D++ R + R L VG + E ++
Sbjct: 70 AAAGLASSGRLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRVAERVFEAADA 129
Query: 127 WEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLKYAPR 186
W+GV+A ++P +RR++ ++ H+ + YKLEV+FE++ + G L + + A+LL+L YAPR
Sbjct: 130 WDGVRAEVIPGKRRVDLYLEHDSQRYKLEVLFEDMKDCLGCTL--DGMGAILLQLNYAPR 189
Query: 187 IYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQASD 246
I+ ISG + SRF R+ C ED + WVR +F+P S G+ ++ ++ + SD
Sbjct: 190 IHTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALVSD 249
Query: 247 IFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKISL 306
I PF ++ + + ++S +VPL+ ++ YEV ++LNSL+HM KI
Sbjct: 250 ILKSLPF-SGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVA 309
Query: 307 SAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSS-Q 366
N DL L L +D + + +++H+L+ CY PL F++ + + KR+ L + +
Sbjct: 310 KHVNADLFKALQELPVDVSRRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNVLLSNEGE 369
Query: 367 KRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAG 426
+M CYRV +TPS+I+C GPE E +NYVVK+ S+YASDF+RVTFV+EDWSKL +
Sbjct: 370 GEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKLSSN 429
Query: 427 AVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASSD 486
A++ I++G SKP++T +Y+RI+++L+ G IG K FEFLAFSASQLR NSVWMFAS+
Sbjct: 430 AISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFASNA 489
Query: 487 NLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDY 546
+L A IR+WMG FE IRS+SKCAARMGQLFSSS QT V DVE+IPDIE+ TDG Y
Sbjct: 490 SLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEITTDGSKY 549
Query: 547 CFSDGIGKISLSFARQVADKCGVN--HIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSML 606
FSDGIGKISL FA++VA G++ ++PSAFQIRYGGYKGVIA+D S LSLR SM
Sbjct: 550 IFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLSLRPSMK 609
Query: 607 KFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDV 666
KFES+++MLN+T S PCY+NREI +LLSTLG++DE F A+QQ+++ + MLT+K+V
Sbjct: 610 KFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTNKEV 669
Query: 667 ALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGR 726
AL+VL G+++ V+ML GYEP+ EPYLSM+L+AH N +D+R+RC+I VPKGR
Sbjct: 670 ALSVLGKLGGSETKTA-VKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVPKGR 729
Query: 727 ILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCLHP 786
+L+GCLDETG+L YGQVY IT E ++ NQ+YF+ D + ++GKV +TKNPCLHP
Sbjct: 730 VLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVVGKVAITKNPCLHP 789
Query: 787 GDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPKT 846
GD+RVLEAI+ +L G+VDCL+FPQ+G RPH NECSGGDLDGDLYFI+WD+ LIP K
Sbjct: 790 GDIRVLEAIYDPDLV--GMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIPEKV 849
Query: 847 EAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKCL 906
+ PMDYT RPRIMDH V LEEIQK FVDYMIND+LGAISTAHL+HADR P KA S +CL
Sbjct: 850 DTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECL 909
Query: 907 ELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIE 966
+LA LHSMAVDFAKTGAPAEMPR L+PRE+PDFMER++KPMYIS+ VLGKLYR+A+ +E
Sbjct: 910 QLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHME 969
Query: 967 QERSRLVWSEEAAR--AIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDE 1026
+ S +A+ YD DLEV G + FL+ AE Y E+Y EK++ LMNYY AE EDE
Sbjct: 970 KSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDE 1029
Query: 1027 ILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYH 1086
IL G++R++ YL+RDN++Y +MKDRI+ +V L +E + W +S + MASAWY
Sbjct: 1030 ILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRKEEDASRMASAWYR 1089
Query: 1087 VTYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKRHQ 1117
VTYHP + F+ SFPW D LL IKA + R +
Sbjct: 1090 VTYHPDRRRGKRFW-SFPWIACDNLLAIKASSQLRRR 1119
BLAST of Cucsa.197050 vs. Swiss-Prot
Match:
RDR1_ARATH (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana GN=RDR1 PE=2 SV=1)
HSP 1 Score: 756.9 bits (1953), Expect = 3.1e-217
Identity = 456/1123 (40.61%), Postives = 651/1123 (57.97%), Query Frame = 1
Query: 8 TLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKAKA 67
T++V P A+++ FL G +V+AI++ +K R VQFT+ E +
Sbjct: 4 TIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP-RVYAIVQFTS-ERHTRL 63
Query: 68 MSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMSVLESWEG 127
+ + L +G L+ + DIV +P + + + G + ++ L S +
Sbjct: 64 IITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQD 123
Query: 128 VKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLKYAPRIYK 187
V R++ F Q+ Y+LE+ +E I + H L++++ AP+I++
Sbjct: 124 VCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFE 183
Query: 188 KISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQASDIFS 247
K + + D W+RTT+F+ +GQST+FC E+ L D
Sbjct: 184 K---EDQPINLLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRE 243
Query: 248 CFPFYKETQ-KDIVLEDGEEFCSTSE-IVPLIKSGLGSNLAYEVEYQLNSLVHMQKISLS 307
F Y E + ++E G + S + +VP++ G +L +E+ ++LN+LV +S
Sbjct: 244 NFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGP 303
Query: 308 AANQDLIDFLCTLDIDTAL--NVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQ 367
A + D L D AL + L++L L CY+P +L+ + + K LP S
Sbjct: 304 ALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGK-LPLSPT 363
Query: 368 KRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAG 427
L + ++ YRV VTP+R+Y GPE+ SN V++++S Y ++F+RV+FV+ED K+ +
Sbjct: 364 ISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSM 423
Query: 428 AVT--TSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFAS 487
++ +S QR RT++Y RI +VLRDGIVIG K+FEFLAFS+SQLR NS WMFA
Sbjct: 424 DLSPRSSTQR-------RTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAP 483
Query: 488 SDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGI 547
D + A IR WMG F+ IR+++K AAR+GQ FSSS +TL V + ++E+IPD+E+ + G
Sbjct: 484 IDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGT 543
Query: 548 DYCFSDGIGKISLSFARQVADKCGVNHI-PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 607
Y FSDGIGKIS FAR+VA KCG+ PSAFQIRYGGYKGV+AVD NS +KLSLR SM
Sbjct: 544 RYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSM 603
Query: 608 LKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKD 667
KFES+N L+V PCY+NR++ TLLSTLGV D FE Q+E + L +LT
Sbjct: 604 SKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPL 663
Query: 668 VALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 727
A L ++ NIL ++ GY+P+ EP+LSMMLQ + +LR++ RIF+ G
Sbjct: 664 EAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGG 723
Query: 728 RILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCLH 787
R ++GCLDET L YGQV + S+ + + I+ G VVV KNPCLH
Sbjct: 724 RSMMGCLDETRTLEYGQV----VVQYSDPMRPGRRF---------IITGPVVVAKNPCLH 783
Query: 788 PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK 847
PGDVRVL+A+ L +VDC++FPQKG RPH NECSG DLDGD+YF+ WD+ L+PP+
Sbjct: 784 PGDVRVLQAVNVPALNH--MVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPR 843
Query: 848 TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 907
T PMDYT +I+DHDV +EE++++F +Y++ND+LG I+ AH AD+EP KA S C
Sbjct: 844 TSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPC 903
Query: 908 LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI 967
+ELA S AVDF KTG A +P+ L +E+PDFME+ DKP Y S NV+GKL+R +
Sbjct: 904 IELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERA 963
Query: 968 EQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1027
S ++ + A YD D+EVDGFE +++ A K Y K+ LM+YYG + E EI
Sbjct: 964 PPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEI 1023
Query: 1028 LMGD-LRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYH 1087
L G +R S+ +R + + I +V+ LRKE F S + N ASAWYH
Sbjct: 1024 LSGGIMRMSKSFTKRRD------AESIGRAVRALRKETLSLFNASEEEENESAKASAWYH 1083
Query: 1088 VTYHPSY---FKEDM---FYFSFPWAVSDVLLNIKAMNSKRHQ 1117
VTYH SY + E + + SF W V D L+ IK N R Q
Sbjct: 1084 VTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQ 1092
BLAST of Cucsa.197050 vs. Swiss-Prot
Match:
RDR1_ORYSJ (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 PE=2 SV=2)
HSP 1 Score: 625.5 bits (1612), Expect = 1.1e-177
Identity = 346/741 (46.69%), Postives = 468/741 (63.16%), Query Frame = 1
Query: 381 SRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRT 440
S +Y GPE+ SN VV+NFSS +F+R++FV+ED KL A ++ G RT
Sbjct: 7 STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASG--HDANRT 66
Query: 441 EIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKI 500
+Y R+++VL DGI IG K FEFLAFS+SQLR NS WMFAS L A +IR WMG F I
Sbjct: 67 ALYKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNI 126
Query: 501 RSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDYCFSDGIGKISLSFARQV 560
R+++K AAR+GQ FSSST+TL V +VE I DI+ +G + FSDGIGKIS +FA +V
Sbjct: 127 RNVAKYAARLGQSFSSSTETLKVQKYEVEEISDIK---NGTQHVFSDGIGKISSAFANEV 186
Query: 561 ADKCGVNHI-PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSM 620
A KC + PSAFQIRYGGYKGV+AVD S KLSLR SMLKF+S N ++V
Sbjct: 187 AMKCNLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQ 246
Query: 621 PCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDVALNVLENFHGADSNNILV 680
P +LNR++ TLLSTLGV+D FE Q+E ++ L +M+TD A+ +E + N +
Sbjct: 247 PGFLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVK 306
Query: 681 QMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVY 740
++L GY+P+ EPYLSM+LQ + +L+++ RI +PKGR ++GCLDET L YGQV+
Sbjct: 307 ELLLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVF 366
Query: 741 ACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEKG 800
T + D + + GKVV+ KNPCLHPGD+R+L A+ L
Sbjct: 367 IRATSGVN-------------DNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHH-- 426
Query: 801 LVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDV 860
+ +C++FPQ+G RPH NECSG DLDGD+YF+SWD +LIPP+ PMDYT +DHDV
Sbjct: 427 MFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDV 486
Query: 861 KLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKCLELAALHSMAVDFAKTGAP 920
+EE++++F +Y++N++LG I+ AH+V AD+E KA S+ C+ELA L S+AVDF KTG P
Sbjct: 487 TIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVP 546
Query: 921 AEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQERSRLVWSEEAARAIYD 980
A +P L +E+PDFME+ DK Y S V+GKLYR K + ++ E AR YD
Sbjct: 547 ALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPHIKH---FTREVARRSYD 606
Query: 981 HDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEILMGDLRSRASYLQRDNRKY 1040
D+ VDG+E ++ A K+ Y K+ LM++YG + E EI+ G + A ++ K
Sbjct: 607 TDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMA----KNFTKK 666
Query: 1041 GDMKDRILLSVKNLRKEVKEWF-ENSCDPLNR-----RMMASAWYHVTYHPSYF------ 1100
D D I L+V++LRKE + F E S D ASAWYHVTYHP ++
Sbjct: 667 SD-ADAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEG 719
Query: 1101 KEDMFYFSFPWAVSDVLLNIK 1109
E + SFPW + + LL IK
Sbjct: 727 YERPHFISFPWCIYEKLLRIK 719
BLAST of Cucsa.197050 vs. Swiss-Prot
Match:
SHL2_ORYSJ (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SHL2 PE=2 SV=1)
HSP 1 Score: 527.7 bits (1358), Expect = 3.1e-148
Identity = 364/1006 (36.18%), Postives = 530/1006 (52.68%), Query Frame = 1
Query: 151 KLEVMFEEILETTGHCLGEEKLNALLLKLKYAPRIYKKISGSNMASRFSSTRYRLCIEDY 210
KLE ++LE + L +LLL+L AP ++ + + + + D
Sbjct: 216 KLEFPVRDVLEVRLYRLD----CSLLLRLAAAPLVHYRTADDDFHEPVPFD-----LLDD 275
Query: 211 DYLWVRTTEFSPMRSVGQ--------STSFCWEVEEDL-----QASDIFSCFPFYKETQK 270
D W+RTT+ +P ++G+ S F +++ L + I C + ++
Sbjct: 276 DDPWIRTTDITPSGAIGRCGVYRISFSARFWPKMDRALDYMRERRVAIVDCGGGWGP-RR 335
Query: 271 DIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKISLSAANQDLIDFLCT 330
+ + D EF + V L + + + +N+LVH I+ + L
Sbjct: 336 GLTVRDELEFGEPMQDVFFCLQH-AEGLKFPLLFMVNALVHKGIINQHQLTPEFFSLLGR 395
Query: 331 LDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQKRLSNNVMNCYRVL 390
+ + + L+ KF +D LK L+ RN K L ++ ++ R++
Sbjct: 396 SEENVNVAALRDFWGDKFPVFDACGRLKKALNRVARNPKLLC----SKVGDDHAEVRRLV 455
Query: 391 VTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAV---TTSIQRGIL 450
+TP+R YCL PE+E SN V++++ A F+RVTF++E L + T I + ++
Sbjct: 456 ITPTRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDLM 515
Query: 451 SKPY--RTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNLKAEEIRQ 510
S + +T +Y R+ +L +G + +++ FLAFS++QLR S W FA E IR+
Sbjct: 516 SNFFQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIRK 575
Query: 511 WMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDYCFSDGIGKI 570
WMG F ++++K AARMGQ FSS+ T+ + +V+ D V+ + Y FSDGIGKI
Sbjct: 576 WMGRFTS-KNVAKHAARMGQCFSSTYATVTMRPDEVDESFDDVVHNE---YIFSDGIGKI 635
Query: 571 SLSFARQVADKCGV-NHIPSAFQIRYGGYKGVIAV--DRNSFRKLSLRDSMLKFESKNKM 630
+ A +VA++ + ++ PSA+QIR+ G+KGVIAV +L LR SM KFES + +
Sbjct: 636 TPDLALEVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHLV 695
Query: 631 LNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDVALNVLENF 690
L V P +LNR+I LLS+L V D F +Q+ L L +L+D+DVA VL
Sbjct: 696 LEVVSWTKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLNNILSDRDVAFEVLTT- 755
Query: 691 HGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDE 750
AD N ML+ G+EP EP+L ML A DL + RIFVPKGR L+GCLDE
Sbjct: 756 SCADDGNTAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLDE 815
Query: 751 TGILNYGQVYACITLTK-SELQNRNQNYFHTIDETKSILLGKVVVTKNPCLHPGDVRVLE 810
G+L GQ + T+ + ++ + F + D+ ++LG VV+ KNPCLHPGDVR+LE
Sbjct: 816 LGVLEQGQCFIRATVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRILE 875
Query: 811 AIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPP--KTEAPMD 870
A+ EL LVDCL+FPQKG RPH NE SG DLDGDLYF++WDE LIPP K+ PMD
Sbjct: 876 AVDVPELHH--LVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMD 935
Query: 871 YTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKCLELAAL 930
Y+ + + V +I FF+ MI++ LG I AH+VHAD A+ KC+ LA L
Sbjct: 936 YSPPEAKQLPRQVSQHDIIDFFLKNMISENLGRICNAHVVHADLSEYGAMDEKCIHLAEL 995
Query: 931 HSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQERSR 990
+ AVDF KTG A MP LKP+ +PDFM + D Y S +LG+LYR SI++ +
Sbjct: 996 AATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLYR----SIQEASNG 1055
Query: 991 LVWSEEAAR---AIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEILMG 1050
V S+E YD DLEV G FL A K Y ++S L++ Y E E++ G
Sbjct: 1056 DVVSQEVCTPNDLPYDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTG 1115
Query: 1051 DLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFE----NSCD------PLNRRMM 1109
+ ++ ++K GD+KDR+ + LRKE K FE + C+ L M
Sbjct: 1116 HI---TFLVKNSSKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMK 1175
BLAST of Cucsa.197050 vs. TrEMBL
Match:
E9NWK9_CUCSA (RNA-dependent RNA polymerase 2 OS=Cucumis sativus GN=Csa_1G005580 PE=2 SV=1)
HSP 1 Score: 2249.2 bits (5827), Expect = 0.0e+00
Identity = 1115/1117 (99.82%), Postives = 1117/1117 (100.00%), Query Frame = 1
Query: 1 MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT
Sbjct: 1 MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 61 LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120
LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS
Sbjct: 61 LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120
Query: 121 VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLK 180
VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLK
Sbjct: 121 VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLK 180
Query: 181 YAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
YAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL
Sbjct: 181 YAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
Query: 241 QASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ 300
QASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ
Sbjct: 241 QASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ 300
Query: 301 KISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPP 360
KISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPP
Sbjct: 301 KISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPP 360
Query: 361 SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL 420
SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL
Sbjct: 361 SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL 420
Query: 421 PAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 480
PAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFA
Sbjct: 421 PAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 480
Query: 481 SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDG 540
SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDG
Sbjct: 481 SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDG 540
Query: 541 IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM
Sbjct: 541 IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
Query: 601 LKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKD 660
LKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKD
Sbjct: 601 LKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKD 660
Query: 661 VALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720
VALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG
Sbjct: 661 VALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720
Query: 721 RILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCLH 780
RILLGCLDETGILNYGQVYACITLTKSELQ+RNQNYFHTIDETKSILLGKVVVTKNPCLH
Sbjct: 721 RILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSILLGKVVVTKNPCLH 780
Query: 781 PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK 840
PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK
Sbjct: 781 PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK 840
Query: 841 TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 900
TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC
Sbjct: 841 TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 900
Query: 901 LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI 960
LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI
Sbjct: 901 LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI 960
Query: 961 EQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1020
EQERSRLVWSEEAARAIYD+DLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI
Sbjct: 961 EQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1020
Query: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHV 1080
LMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHV
Sbjct: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHV 1080
Query: 1081 TYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKRHQA 1118
TYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKRHQA
Sbjct: 1081 TYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKRHQA 1117
BLAST of Cucsa.197050 vs. TrEMBL
Match:
M5WGW0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000513mg PE=4 SV=1)
HSP 1 Score: 1603.6 bits (4151), Expect = 0.0e+00
Identity = 772/1115 (69.24%), Postives = 933/1115 (83.68%), Query Frame = 1
Query: 1 MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
MA ER T+RVSN+P++ A++LL+FL SKLG DSVFA+EI ++ KNWKSRG GRVQFTT
Sbjct: 1 MALAERPTVRVSNIPQTVTAKELLSFLQSKLGTDSVFAVEIISDHKNWKSRGFGRVQFTT 60
Query: 61 LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120
LEAK++A SLS+QN LVF +++LR S DDI+ RPV R VLH GFM+K + MS
Sbjct: 61 LEAKSEAYSLSLQNGLVFKSESLRLSETYDDIIQRPVDPKRRLNGTVLHAGFMVKGDCMS 120
Query: 121 VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLK 180
+LESWEGV+AW+MPER+R+EFW+W ECYKLE+ FE I+E+ G LG EK+NALLLKLK
Sbjct: 121 MLESWEGVRAWVMPERKRVEFWVWLRDECYKLEIAFENIMESFGCRLGGEKVNALLLKLK 180
Query: 181 YAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
+ PRI++KISG N+A+RFS+ RY +C +D+D+LWVRTT+FS M+S+G STSFCWE+EE+
Sbjct: 181 FGPRIFRKISGPNVAARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFCWEIEEEF 240
Query: 241 QASDIFSCFPFYKETQK-DIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHM 300
SD+F CFP+YK+ D++L++GE++CS SE VPL+K S L YE+ +QLN+LVH
Sbjct: 241 SVSDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLVKCRSDSKLPYEILFQLNALVHS 300
Query: 301 QKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLP 360
QKISL+A + DLI+FL L +DT +L++LH+ K CYDPLSFLK QLHV +RN KS P
Sbjct: 301 QKISLAATDSDLIEFLSGLSVDTTNVLLEKLHKRKTTCYDPLSFLKMQLHVLERNHKSRP 360
Query: 361 PSSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSK 420
++ + +NVM+C+RVL+TPS+I CLGPELE SNYVVKNF++YASDFMRVTFV+EDWSK
Sbjct: 361 SPYKRLMEHNVMSCHRVLITPSKICCLGPELEKSNYVVKNFAAYASDFMRVTFVDEDWSK 420
Query: 421 LPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMF 480
LPA A++TSIQ+GI +KP+RT IYHR++++LRDGIVIG KRFEFLAFSASQLRS+SVWMF
Sbjct: 421 LPANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIGEKRFEFLAFSASQLRSSSVWMF 480
Query: 481 ASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTD 540
+S+DN+KAE+IR+WMGCF KIRSISKCAARMGQLFSSSTQTLVVP +DVEIIPD+E ++D
Sbjct: 481 SSNDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSSTQTLVVPAQDVEIIPDVETSSD 540
Query: 541 GIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDS 600
G+ YCFSDGIGKISLSFAR+VA KCG++ PSAFQIRYGGYKGVIAVD SFRKLSLR S
Sbjct: 541 GVTYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSFRKLSLRSS 600
Query: 601 MLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDK 660
MLKFESKN+MLNVTK D+MPCYLNREI +LLSTLGVKDE+FEALQ+EQL LL +M T++
Sbjct: 601 MLKFESKNRMLNVTKWSDAMPCYLNREIISLLSTLGVKDETFEALQEEQLRLLGKMRTER 660
Query: 661 DVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPK 720
ALNV E +GADS N LV+ML HGYEPN EPYLSMMLQA+Y N SDL+SRCRIFVPK
Sbjct: 661 GAALNVFERLNGADSKNTLVKMLLHGYEPNAEPYLSMMLQAYYENHLSDLKSRCRIFVPK 720
Query: 721 GRILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCL 780
GR+L+GCLDETG L+YGQVY IT+TK+E + +Q++F +DET ++ GKVVVTKNPCL
Sbjct: 721 GRVLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFFQKVDETTLVVTGKVVVTKNPCL 780
Query: 781 HPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPP 840
HPGDVRVL+A++ V LEEK +VDCLIFPQKG RPH NECSGGDLDGDL+FISWD++L+P
Sbjct: 781 HPGDVRVLDAVYDVVLEEKNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWDKDLVPS 840
Query: 841 KTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAK 900
T PMDY+ RRPRIMDH V LEEIQKFFVDYMIND LGAISTAHLVHAD EP KAL+ K
Sbjct: 841 HTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADHEPDKALNPK 900
Query: 901 CLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKS 960
CL+LA LHSMAVDFAKTGAPAEM R LKP+EFPDFMER DKPMYIS+ LGKLYRA V S
Sbjct: 901 CLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAVVGS 960
Query: 961 IEQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDE 1020
+ QE++ LVWSE+ A A YD DLEVDG E+ LE+A+ +++MYIEKM +MNYYGA EDE
Sbjct: 961 VLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDMYIEKMRTMMNYYGAVTEDE 1020
Query: 1021 ILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYH 1080
IL G+LR+RA+YLQRDNR+YGDMKDRI LS+KNL+KE K FE+SC + MASAWYH
Sbjct: 1021 ILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGLFESSCPVSEHQRMASAWYH 1080
Query: 1081 VTYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKR 1115
VTYHPSYF++DM SFPW V D+LLNIKA+N+ R
Sbjct: 1081 VTYHPSYFQQDMNCLSFPWIVGDILLNIKALNNPR 1115
BLAST of Cucsa.197050 vs. TrEMBL
Match:
A0A067K4I1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11502 PE=4 SV=1)
HSP 1 Score: 1593.6 bits (4125), Expect = 0.0e+00
Identity = 769/1111 (69.22%), Postives = 926/1111 (83.35%), Query Frame = 1
Query: 5 ERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAK 64
ER T R++++P++ IA+DLL +L S+LG DSVFAIEI TERKNWKSRG GRVQF+TLE +
Sbjct: 9 ERPTARLTSIPQTVIAEDLLQYLESQLGQDSVFAIEICTERKNWKSRGFGRVQFSTLEFR 68
Query: 65 AKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMSVLES 124
KA SL +QN LVF + L S DDI+ RP+ +R ENGVL+ GFM +E + VLES
Sbjct: 69 HKAQSLCLQNKLVFKSHYLLVSDTYDDIIPRPIKPQHRQENGVLYAGFMKQERCLCVLES 128
Query: 125 WEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLKYAPR 184
WE V+ W+MPERRR+EFW+W +++CYK+E+ FE++ + G CLG +K+NA+LLKL+Y PR
Sbjct: 129 WEDVRGWLMPERRRVEFWLWVDKDCYKVEIRFEDVKDAVGFCLGGDKVNAVLLKLRYGPR 188
Query: 185 IYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQASD 244
IYK+ISG ++AS+FS+ RY +C ED+D++WVRT +FS ++S+G+STSFCWEVEE L ASD
Sbjct: 189 IYKRISGPDVASKFSADRYHICKEDFDFIWVRTADFSSVKSIGKSTSFCWEVEEGLDASD 248
Query: 245 IFSCFPFYKETQKDIVLEDGEEFCS-TSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKIS 304
IF+ FP+Y E ++DIVLEDGE+F TSE+VPL S LAYE+ +QLNSLVH KIS
Sbjct: 249 IFTSFPYYVEDRRDIVLEDGEKFHPITSEMVPLAGYESDSKLAYEIFFQLNSLVHTHKIS 308
Query: 305 LSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQ 364
L+A + DL L +L IDTA+ +LQ+LH+L F CYDP+SF+K QLH +RN K S +
Sbjct: 309 LAAVDTDLFKILGSLTIDTAMAILQKLHKLTFTCYDPVSFVKKQLHAPRRNLKKPSSSQK 368
Query: 365 KRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAG 424
+N+M C+R L+TPS+IYCLGPELE+SNYVVKNF+SYASDFMRVTFVEEDWSKLP
Sbjct: 369 SSTDHNIMICHRALITPSKIYCLGPELESSNYVVKNFASYASDFMRVTFVEEDWSKLPVN 428
Query: 425 AVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASSD 484
A++TSIQ GI +KP+RT+IY RI++VLRDGIVIGAKRFEFLAFSASQLRSNSVWMFAS+D
Sbjct: 429 AISTSIQHGIFAKPFRTKIYERILSVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASND 488
Query: 485 NLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDY 544
N+KAE+IRQWMGCF KIRSISKCAARMGQLFS+S QT VVP DVEIIPDIEV +DGI Y
Sbjct: 489 NVKAEDIRQWMGCFNKIRSISKCAARMGQLFSASKQTFVVPAEDVEIIPDIEVTSDGIGY 548
Query: 545 CFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKF 604
CFSDGIGKISLSFA+QVA KCG+NH PSAFQIRYGG+KGVIAVDRNS RKLSLR SMLKF
Sbjct: 549 CFSDGIGKISLSFAQQVAQKCGLNHTPSAFQIRYGGFKGVIAVDRNSLRKLSLRSSMLKF 608
Query: 605 ESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDVAL 664
ES+N+MLNVTK DSMPCYLNREI TLLSTLGVKDE F+ LQQ+QLHLL RML D++ AL
Sbjct: 609 ESENRMLNVTKWSDSMPCYLNREIVTLLSTLGVKDEIFQGLQQQQLHLLGRMLNDREAAL 668
Query: 665 NVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRIL 724
+VLEN DS NI+V+ML GY+PN+EPYLSMMLQA++ NL +LRSRCR+FVPKGRIL
Sbjct: 669 DVLENLAWVDSRNIMVKMLLQGYKPNVEPYLSMMLQAYHENLLVELRSRCRVFVPKGRIL 728
Query: 725 LGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCLHPGD 784
+GCLDE GIL+YGQ+Y +TL+KSELQN +Q++F +DET SI+ GKVVVTKNPCLHPGD
Sbjct: 729 IGCLDEEGILDYGQIYVRVTLSKSELQNADQSFFRKVDETTSIVTGKVVVTKNPCLHPGD 788
Query: 785 VRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPKTEA 844
VRVLEA++ V LEEKGLVDC++FPQKG RPH NECSGGDLDGDL+FISWDE+LIP +TE+
Sbjct: 789 VRVLEAVYEVGLEEKGLVDCILFPQKGERPHPNECSGGDLDGDLFFISWDEDLIPSQTES 848
Query: 845 PMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKCLEL 904
PMDY GRRPRIMDHDVKLEEI KFFVDYMINDTLGAISTAHLVHADREP KA S KCL+L
Sbjct: 849 PMDYLGRRPRIMDHDVKLEEIHKFFVDYMINDTLGAISTAHLVHADREPDKARSRKCLKL 908
Query: 905 AALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQE 964
A LHSMAVDFAKTGAPAEMPR LKP+EFPDFMERFDK YIS VLGKLYR + S Q
Sbjct: 909 AELHSMAVDFAKTGAPAEMPRALKPKEFPDFMERFDKSTYISDAVLGKLYRGTLDSTLQG 968
Query: 965 RSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEILMG 1024
R++ +WSE+ A A YD +LEV+GF F++IA +K MY+EK+S LMNYY A+ EDE+L G
Sbjct: 969 RTKFIWSEKIAEATYDCNLEVEGFMEFIDIAANHKYMYMEKLSGLMNYYEAKNEDEMLTG 1028
Query: 1025 DLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHVTYH 1084
+LR++A YLQRDNR+YGD KDRILLS+K+L+KE KEWFE+SC P ++ +ASAWYHVT H
Sbjct: 1029 NLRNKAMYLQRDNRRYGDTKDRILLSMKSLQKEAKEWFESSCRPSTQQCLASAWYHVTCH 1088
Query: 1085 PSYFKEDMFYFSFPWAVSDVLLNIKAMNSKR 1115
P+YF+E + FPW V D+LLNIK ++K+
Sbjct: 1089 PNYFQEGITCLGFPWIVGDILLNIKTASNKK 1119
BLAST of Cucsa.197050 vs. TrEMBL
Match:
A0A067FQX3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001183mg PE=4 SV=1)
HSP 1 Score: 1586.2 bits (4106), Expect = 0.0e+00
Identity = 772/1127 (68.50%), Postives = 935/1127 (82.96%), Query Frame = 1
Query: 7 STLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKAK 66
+T+ VSN+P++AIA+DLL FL SKLG +SVFA+EI T+R NWKSRG GRVQFT+L+ K+K
Sbjct: 4 ATVWVSNIPQTAIAKDLLLFLESKLGKNSVFALEIITDRSNWKSRGIGRVQFTSLDFKSK 63
Query: 67 AMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMSVLESWE 126
A +LS+ + LVF +QNL+ S + DIV RPV A +R E+GVLHVG M KEER+ VL+++E
Sbjct: 64 AQNLSLNDKLVFNSQNLKISETHSDIVPRPVKAQHRVEDGVLHVGVMCKEERLRVLQTFE 123
Query: 127 GVKAWIMPERRRIEFWIW--HEQE---------------CYKLEVMFEEILETTGHCLGE 186
GV+ W++P+RRR+EFW+W H E C+K+E++FE++LET G L E
Sbjct: 124 GVRGWLLPDRRRLEFWVWPKHNGEWQKGIQECQSDSSDCCFKVEILFEDVLETVGFSLDE 183
Query: 187 -EKLNALLLKLKYAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQ 246
+N +L KLKY P+IY+K+SG ++AS+F S RY +C ED+D+ WVRTT+FS +S+G
Sbjct: 184 GATVNGILFKLKYGPKIYQKVSGPHVASKFPSDRYHICKEDFDFFWVRTTDFSVTKSIGC 243
Query: 247 STSFCWEVEEDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYE 306
STSF WE++ L ASDI + FPFYKE + D++LE+GEEFC+TSEIVPL+K G NL++E
Sbjct: 244 STSFFWEIKNGLLASDISNIFPFYKEDKTDLILEEGEEFCTTSEIVPLVKCRPGFNLSHE 303
Query: 307 VEYQLNSLVHMQKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQL 366
V +QLNSLVH QK+SL AA+ +LI L L ++TAL VLQ+LH+LK +CYDP+SF+KTQL
Sbjct: 304 VLFQLNSLVHNQKVSLVAADAELIQILSGLSMETALMVLQKLHKLKSICYDPVSFVKTQL 363
Query: 367 HVYKRNCKSLPPSSQKRL-SNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDF 426
HV RNCKS+P SS KRL +NVM+CYR LVTP +IYCLGPELETSNYVVKNF+ YASDF
Sbjct: 364 HVLGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPELETSNYVVKNFAKYASDF 423
Query: 427 MRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFS 486
MRVTFVEEDWSKLPA A++TSIQRGI SKPYRT+IY RI+T+L+DGIVIG K +EFLAFS
Sbjct: 424 MRVTFVEEDWSKLPANALSTSIQRGIFSKPYRTKIYSRILTILQDGIVIGDKHYEFLAFS 483
Query: 487 ASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRD 546
ASQLR+NSVWMFAS+D + AE++R WMGCF KIRS+SKCAARMGQLFSSS QTLVVP +D
Sbjct: 484 ASQLRNNSVWMFASNDEVSAEDVRGWMGCFNKIRSVSKCAARMGQLFSSSKQTLVVPVQD 543
Query: 547 VEIIPDIEVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVD 606
VE+IPD+EV +DG YCFSDGIGKISLSFARQVA KCG++H PSAFQIRYGGYKGVIAVD
Sbjct: 544 VEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVIAVD 603
Query: 607 RNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQE 666
RNSFRKLSLR SMLKFES+N+MLNVTK +SMPC+LNREI +LLSTLGVKDE FEA+QQ+
Sbjct: 604 RNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIISLLSTLGVKDEVFEAMQQQ 663
Query: 667 QLHLLKRMLTDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFS 726
QL LL +ML +++ AL+VL+ +G DS NILV+ML GYEPN+EPYLSMML +H+ N S
Sbjct: 664 QLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPNVEPYLSMMLLSHHENQLS 723
Query: 727 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSIL 786
DL+SRCRI+VPKGR+L+GC DETGILNYGQV+ +T+T+ EL++++Q++FH +D+ SI+
Sbjct: 724 DLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELESKDQSFFHRVDDKTSIV 783
Query: 787 LGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDL 846
GKV+VTKNPCLHPGDVRVLEA++ ++LEEK VDC+IFPQKG RPH NECSGGDLDGD+
Sbjct: 784 KGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQKGERPHPNECSGGDLDGDI 843
Query: 847 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVH 906
+FISWD +LIP +TE PMDYTGRR RIMDHDV LEEI KFFVDYMINDTLGAISTAHLVH
Sbjct: 844 FFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDTLGAISTAHLVH 903
Query: 907 ADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 966
ADR+P KA S+KCL LA LHSMAVDFAKTGAPAEMP LKP+EFPDFMER DKP YIS
Sbjct: 904 ADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFMEREDKPRYISFG 963
Query: 967 VLGKLYRAAVKSIEQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSI 1026
VLGKLYRA + SI Q RS +WSE+ A A YDHDLEVDGFEAFL +AE++KEMY E+M+
Sbjct: 964 VLGKLYRATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEMYEEEMNA 1023
Query: 1027 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDP 1086
LMNYYGA EDEIL G+LR+RASYLQRDNR+YGDMKDRILLS KNL+ E KEWF +SC
Sbjct: 1024 LMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNEAKEWFGSSCKE 1083
Query: 1087 LNRRMMASAWYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKR 1115
+ASAWYHVTY PSY KE M SFPW V D+LLNIK++NS++
Sbjct: 1084 NEHPQLASAWYHVTYSPSYCKERMALLSFPWIVGDILLNIKSVNSRK 1130
BLAST of Cucsa.197050 vs. TrEMBL
Match:
W9S7I8_9ROSA (RNA-dependent RNA polymerase 2 OS=Morus notabilis GN=L484_002118 PE=4 SV=1)
HSP 1 Score: 1569.7 bits (4063), Expect = 0.0e+00
Identity = 747/1115 (67.00%), Postives = 933/1115 (83.68%), Query Frame = 1
Query: 2 AQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTL 61
A ER T+RV+N+P++AIA DL FL SKLGP+SVFA+EI TERKNWKSRG GRVQFT+L
Sbjct: 3 AMVERPTVRVTNIPQTAIATDLQTFLESKLGPNSVFAVEISTERKNWKSRGFGRVQFTSL 62
Query: 62 EAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMSV 121
AK A +LS+ N+ VF ++NL +DDIV PV R E+GVLH GFM++++RM+V
Sbjct: 63 AAKLVAQALSLSNNFVFRSRNLGIFDTHDDIVALPVDPKLRLEDGVLHAGFMIRDDRMAV 122
Query: 122 LESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLKY 181
L+SWEGV+AW MPER R+EFW+W +++CYKLEV FE++LET G+CL + KL A LL+LKY
Sbjct: 123 LQSWEGVRAWAMPERNRVEFWVWSDEDCYKLEVAFEDVLETVGYCLDDGKLYAFLLQLKY 182
Query: 182 APRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQ 241
P+IYK+IS S+F + RY +C ED+++ WVRTT+F +S+G STS CW+ +ED
Sbjct: 183 GPKIYKRIS---RPSKFVADRYHICKEDFEFHWVRTTDFLESKSIGHSTSLCWDAKEDFL 242
Query: 242 ASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQK 301
+SD F FP+Y+E KD++LED +EFCS SE VPLIK GSNL+YE+ +QLNSLVHMQK
Sbjct: 243 SSDTFRSFPYYREGMKDLILEDSDEFCSVSETVPLIKCPAGSNLSYEILFQLNSLVHMQK 302
Query: 302 ISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPS 361
IS ++A+ DLI++ +L+IDTA V+Q+LH+LK CYDPLS KT H+ ++N K+ P S
Sbjct: 303 ISFASADADLIEYFGSLNIDTANAVIQKLHKLKSTCYDPLSLAKTYAHILEKNTKN-PSS 362
Query: 362 SQKRLS-NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL 421
+ KRL+ N++M+C+R L+TPS+IYC+GPELETSNYVVKNF++YASDF+RVTFVEEDW KL
Sbjct: 363 AIKRLTENSLMSCHRALITPSKIYCMGPELETSNYVVKNFAAYASDFLRVTFVEEDWGKL 422
Query: 422 PAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 481
V+TSI++GI +KPYRT IY RI+++LR+GI+IGAKR+EFLAFSASQLRS++VWMFA
Sbjct: 423 HPHVVSTSIEQGIFAKPYRTGIYDRILSILRNGILIGAKRYEFLAFSASQLRSSAVWMFA 482
Query: 482 SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDG 541
S+DN+KAE+IR+WMGCF KIRS+SKCAARMGQLFSSS QTL+VPT+D+EIIPD+EV TDG
Sbjct: 483 SNDNVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSRQTLIVPTQDLEIIPDVEVTTDG 542
Query: 542 IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 601
IDYCFSDGIGKIS SFARQVA KCG+ PSAFQIRYGGYKGVIAV+R+SFRKLSLR SM
Sbjct: 543 IDYCFSDGIGKISSSFARQVAQKCGLKETPSAFQIRYGGYKGVIAVNRSSFRKLSLRSSM 602
Query: 602 LKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKD 661
LKFES N+MLNVTK SMPCYLNREI +LLS+LGVKDESF AL +EQL LL +M T+++
Sbjct: 603 LKFESSNRMLNVTKWSGSMPCYLNREIVSLLSSLGVKDESFLALLREQLLLLGKMRTNRE 662
Query: 662 VALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 721
ALNVLEN +G+DS+NILV+ML GYEPN EPYLSMM+Q++Y N SDL++RCRIFVPKG
Sbjct: 663 AALNVLENLNGSDSSNILVKMLLQGYEPNAEPYLSMMIQSYYENQLSDLKTRCRIFVPKG 722
Query: 722 RILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCLH 781
++L+GCLDETGIL YGQVY +T+ K+EL+ NQ++F +D+ SI++GKVVVTKNPCLH
Sbjct: 723 KVLIGCLDETGILEYGQVYVRLTMKKAELEAGNQSFFRKVDDETSIVVGKVVVTKNPCLH 782
Query: 782 PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK 841
PGDVRVLEA++ +LEE+GLVDCL+FPQKG RPH NECSGGDLDGDL+FISWD NLIPP+
Sbjct: 783 PGDVRVLEAVYDAKLEEEGLVDCLVFPQKGERPHPNECSGGDLDGDLFFISWDTNLIPPR 842
Query: 842 TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 901
T APMDY GRRPRIMDHDV LEEIQKFFVDYMINDTLG ISTAHL+HADREP+KA S C
Sbjct: 843 TTAPMDYIGRRPRIMDHDVTLEEIQKFFVDYMINDTLGGISTAHLIHADREPEKAFSENC 902
Query: 902 LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI 961
L+LA LHSMAVDFAKTGAPAEMPR L+PR++PDFMER D+PMY+S+ LGKLYRA V+S
Sbjct: 903 LQLATLHSMAVDFAKTGAPAEMPRALRPRDYPDFMERLDRPMYVSNGALGKLYRATVESE 962
Query: 962 EQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1021
Q S LVWSE+ A A YD DLEV+GFE F+ +AE++++MYI+KM+ +MNYY E EDE+
Sbjct: 963 SQGSSNLVWSEKTAEAAYDRDLEVNGFEEFIALAESHRDMYIDKMNGIMNYYELESEDEV 1022
Query: 1022 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHV 1081
L G+LR RA+YLQRDNR+Y ++KDRILL+VK+L++E K WFE SC+ + ++ MASAWYHV
Sbjct: 1023 LTGNLRKRAAYLQRDNRRYFEVKDRILLAVKSLQREAKGWFEGSCEAMEQQKMASAWYHV 1082
Query: 1082 TYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKRH 1116
TYHP+Y+++ + SFPW D+LLNIK++NS+R+
Sbjct: 1083 TYHPNYYQKSINCLSFPWIKGDILLNIKSINSQRN 1113
BLAST of Cucsa.197050 vs. TAIR10
Match:
AT4G11130.1 (AT4G11130.1 RNA-dependent RNA polymerase 2)
HSP 1 Score: 1370.9 bits (3547), Expect = 0.0e+00
Identity = 672/1116 (60.22%), Postives = 855/1116 (76.61%), Query Frame = 1
Query: 6 RSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKA 65
RST+++SNVP++ +A +LL FL LG D+VFA+EI T R NWK R RVQFTTLE K+
Sbjct: 9 RSTVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKS 68
Query: 66 KAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEE-RMSVLES 125
+A LS Q+ L+F T NLR S DDI+ RPV R ++ VL VGF +E R LE
Sbjct: 69 RAQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEK 128
Query: 126 WEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEE--KLNALLLKLKYA 185
W+GV+ WI+ E+RR+EFW+W +CYK+EV FE+I+ET C+ + +++A LLKLKY
Sbjct: 129 WDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYG 188
Query: 186 PRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQA 245
P+++K+++ ++A++F S RYR C ED+D++W+RTT+FS +S+G ST FC EV
Sbjct: 189 PKVFKRVT-VHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTM 248
Query: 246 SDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSG-LGSNLAYEVEYQLNSLVHMQK 305
DIFS P+Y+E + DG+ F S ++IVPL+ + LG YE+ +QLN+LVH QK
Sbjct: 249 LDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQK 308
Query: 306 ISLSAANQ-DLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPP 365
ISL AA+ +LI L + ++TAL +L++LHQ +CYDP+ F+KTQ+ + K P
Sbjct: 309 ISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPA 368
Query: 366 SSQKRLSN-NVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSK 425
S+ KRL+ N+M+C R VTPS+IY LGPELET+NYVVKNF+ + SDFMRVTFVEEDWSK
Sbjct: 369 SAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSK 428
Query: 426 LPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMF 485
LPA A++ + + G KP RT IY+R++++L +GI +G KRFEFLAFSASQLR NSVWMF
Sbjct: 429 LPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMF 488
Query: 486 ASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTD 545
AS++ +KAE+IR+WMGCF KIRSISKCAARMGQLFS+S QTL+V +DVE IPDIEV TD
Sbjct: 489 ASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTD 548
Query: 546 GIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDS 605
G DYCFSDGIGKISL+FA+QVA KCG++H+PSAFQIRYGGYKGVIAVDR+SFRKLSLRDS
Sbjct: 549 GADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDS 608
Query: 606 MLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDK 665
MLKF+S N+MLNVT+ +SMPC+LNREI LLSTLG++D FEA+Q L +L ML D+
Sbjct: 609 MLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDR 668
Query: 666 DVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPK 725
D ALNVL+ G +S N+LV+ML GY P+ EPYLSMML+ H+ + S+L+SRCRI VPK
Sbjct: 669 DAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPK 728
Query: 726 GRILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCL 785
GRIL+GC+DE GIL YGQVY +TLTK+EL++R+Q+YF IDE S+++GKVVVTKNPCL
Sbjct: 729 GRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPCL 788
Query: 786 HPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPP 845
HPGD+RVL+AI+ V EEKG +DC+IFPQKG RPH NECSGGDLDGD +F+SWDE +IP
Sbjct: 789 HPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPS 848
Query: 846 KTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAK 905
+ + PMDY G RPR+MDHDV LEEI KFFVDYMI+DTLG ISTAHLVHADR+P+KA S K
Sbjct: 849 EMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQK 908
Query: 906 CLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKS 965
CLELA LHS AVDFAKTGAPAEMP LKPREFPDF+ERF+KP YIS +V GKLYRA S
Sbjct: 909 CLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVKSS 968
Query: 966 IEQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDE 1025
+ Q + +E YD LE GFE+F+E A+ +++MY EK++ LM YYGA E+E
Sbjct: 969 LAQRKPE---AESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEE 1028
Query: 1026 ILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSC-DPLNRRMMASAWY 1085
IL G L+++ YL RDNR+YGDMKDRI LSVK+L KE WFE SC D ++ +ASAWY
Sbjct: 1029 ILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCEDEQQKKKLASAWY 1088
Query: 1086 HVTYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKR 1115
+VTY+P++ E + + SFPW V DVLL+IKA N++R
Sbjct: 1089 YVTYNPNHRDEKLTFLSFPWIVGDVLLDIKAENAQR 1120
BLAST of Cucsa.197050 vs. TAIR10
Match:
AT1G14790.1 (AT1G14790.1 RNA-dependent RNA polymerase 1)
HSP 1 Score: 756.9 bits (1953), Expect = 1.8e-218
Identity = 456/1123 (40.61%), Postives = 651/1123 (57.97%), Query Frame = 1
Query: 8 TLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKAKA 67
T++V P A+++ FL G +V+AI++ +K R VQFT+ E +
Sbjct: 4 TIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP-RVYAIVQFTS-ERHTRL 63
Query: 68 MSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMSVLESWEG 127
+ + L +G L+ + DIV +P + + + G + ++ L S +
Sbjct: 64 IITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQD 123
Query: 128 VKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLKYAPRIYK 187
V R++ F Q+ Y+LE+ +E I + H L++++ AP+I++
Sbjct: 124 VCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFE 183
Query: 188 KISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQASDIFS 247
K + + D W+RTT+F+ +GQST+FC E+ L D
Sbjct: 184 K---EDQPINLLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRE 243
Query: 248 CFPFYKETQ-KDIVLEDGEEFCSTSE-IVPLIKSGLGSNLAYEVEYQLNSLVHMQKISLS 307
F Y E + ++E G + S + +VP++ G +L +E+ ++LN+LV +S
Sbjct: 244 NFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGP 303
Query: 308 AANQDLIDFLCTLDIDTAL--NVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQ 367
A + D L D AL + L++L L CY+P +L+ + + K LP S
Sbjct: 304 ALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGK-LPLSPT 363
Query: 368 KRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAG 427
L + ++ YRV VTP+R+Y GPE+ SN V++++S Y ++F+RV+FV+ED K+ +
Sbjct: 364 ISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSM 423
Query: 428 AVT--TSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFAS 487
++ +S QR RT++Y RI +VLRDGIVIG K+FEFLAFS+SQLR NS WMFA
Sbjct: 424 DLSPRSSTQR-------RTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAP 483
Query: 488 SDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGI 547
D + A IR WMG F+ IR+++K AAR+GQ FSSS +TL V + ++E+IPD+E+ + G
Sbjct: 484 IDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGT 543
Query: 548 DYCFSDGIGKISLSFARQVADKCGVNHI-PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 607
Y FSDGIGKIS FAR+VA KCG+ PSAFQIRYGGYKGV+AVD NS +KLSLR SM
Sbjct: 544 RYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSM 603
Query: 608 LKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKD 667
KFES+N L+V PCY+NR++ TLLSTLGV D FE Q+E + L +LT
Sbjct: 604 SKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPL 663
Query: 668 VALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 727
A L ++ NIL ++ GY+P+ EP+LSMMLQ + +LR++ RIF+ G
Sbjct: 664 EAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGG 723
Query: 728 RILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCLH 787
R ++GCLDET L YGQV + S+ + + I+ G VVV KNPCLH
Sbjct: 724 RSMMGCLDETRTLEYGQV----VVQYSDPMRPGRRF---------IITGPVVVAKNPCLH 783
Query: 788 PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK 847
PGDVRVL+A+ L +VDC++FPQKG RPH NECSG DLDGD+YF+ WD+ L+PP+
Sbjct: 784 PGDVRVLQAVNVPALNH--MVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPR 843
Query: 848 TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 907
T PMDYT +I+DHDV +EE++++F +Y++ND+LG I+ AH AD+EP KA S C
Sbjct: 844 TSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPC 903
Query: 908 LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI 967
+ELA S AVDF KTG A +P+ L +E+PDFME+ DKP Y S NV+GKL+R +
Sbjct: 904 IELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERA 963
Query: 968 EQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1027
S ++ + A YD D+EVDGFE +++ A K Y K+ LM+YYG + E EI
Sbjct: 964 PPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEI 1023
Query: 1028 LMGD-LRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYH 1087
L G +R S+ +R + + I +V+ LRKE F S + N ASAWYH
Sbjct: 1024 LSGGIMRMSKSFTKRRD------AESIGRAVRALRKETLSLFNASEEEENESAKASAWYH 1083
Query: 1088 VTYHPSY---FKEDM---FYFSFPWAVSDVLLNIKAMNSKRHQ 1117
VTYH SY + E + + SF W V D L+ IK N R Q
Sbjct: 1084 VTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQ 1092
BLAST of Cucsa.197050 vs. TAIR10
Match:
AT3G49500.1 (AT3G49500.1 RNA-dependent RNA polymerase 6)
HSP 1 Score: 527.7 bits (1358), Expect = 1.7e-149
Identity = 377/1125 (33.51%), Postives = 572/1125 (50.84%), Query Frame = 1
Query: 56 VQFTTLEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGV-------- 115
V F E+ +AM + Q +L+ Q L+ SL + P R V
Sbjct: 81 VHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKN----PYSLNQRRRTTVPYKLAGIT 140
Query: 116 LHVGFMLKEERMSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMF---EEILETTG 175
L +G ++ + V EGV + P +F C++ F + ++
Sbjct: 141 LEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKF-------CFRKSTAFSFKDAVMHAVI 200
Query: 176 HCLGEEKLNALLLKLKYAPRIYKKISGSNMASRFSSTR---YRLCIED-YDYL------- 235
+C + KL L+ ++ R YK + G + + +S+ YR +D YD +
Sbjct: 201 NC--DYKLELLVRDIQTV-RQYKTLHGFVLILQLASSPRVWYRTADDDIYDTVPGDLLDD 260
Query: 236 ---WVRTTEFSPMRSVGQ--------STSFCWEVEEDLQ-ASDIFSCFPFYKETQKDIVL 295
W+RTT+F+ + ++G+ S + E L+ A D F +E +
Sbjct: 261 DDPWIRTTDFTQVGAIGRCHSYRVLISPRY----ENKLRTALDYFRMRRVQEERVRWPPR 320
Query: 296 EDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKISLSAANQDLIDFLCTLDID 355
E +++E+ + +NS++H + + D L D
Sbjct: 321 IRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKD 380
Query: 356 TALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQKRLSNNVMNCYRVLVTPS 415
+ L+ L K +D LK ++N K L Q S ++ R+++TP+
Sbjct: 381 VNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQ---SEDISEIRRLVITPT 440
Query: 416 RIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAVT---TSIQRGILSKPY 475
R YCL PE+E SN V++ + + A F+RVTF++E + + ++ I + + S +
Sbjct: 441 RAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSF 500
Query: 476 --RTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNLKAEEIRQWMGC 535
+T ++ R+ ++L DG + +++ FLAFSA+QLR S W FA + +I+ WMG
Sbjct: 501 SQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGK 560
Query: 536 FEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEI-IPDIEVNTDGIDYCFSDGIGKISLS 595
F K ++++KCAARMG FSS+ T+ V +V+ +PDIE N Y FSDGIG I+
Sbjct: 561 F-KDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERN----GYVFSDGIGTITPD 620
Query: 596 FARQVADKC--GVNHIPSAFQIRYGGYKGVIA--VDRNSFRKLSLRDSMLKFESKNKMLN 655
A +V +K V++ P A+QIRY G+KGV+A ++ +L+LRDSM KF SK+ +L
Sbjct: 621 LADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILE 680
Query: 656 VTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDVALNVLENFHG 715
+ P +LNR+I TLLS LGV DE F +Q+ L+ L R+L D DVA VL
Sbjct: 681 ICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVL-TASC 740
Query: 716 ADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETG 775
A+ N ML+ G++P EP+L ML + LR + RIFV GR L+GCLDE G
Sbjct: 741 AEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAG 800
Query: 776 ILNYGQVYACITLTKSELQNRNQNYFHTIDETKS---ILLGKVVVTKNPCLHPGDVRVLE 835
IL +GQ + I ++K ++N + ETK+ ++ G V + KNPCLHPGDVR+LE
Sbjct: 801 ILEHGQCF--IQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILE 860
Query: 836 AIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPP--KTEAPMD 895
A+ +L + DCLIFPQKG RPHTNE SG DLDGDLYF++WD+ LIPP K+ M
Sbjct: 861 AVDVPQLHH--MYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMH 920
Query: 896 YTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKCLELAAL 955
Y + + V ++I FF + N+ LG I AH+VHADR A+ +CL LA L
Sbjct: 921 YDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAEL 980
Query: 956 HSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQERSR 1015
+ AVDF KTG MP LKP+ +PDFM + D Y S+ +LG+LYR VK + E +
Sbjct: 981 AATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYR-RVKEVYDEDAE 1040
Query: 1016 LVWSE--EAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEILMGD 1075
E + + YD LE+ GFE + A +K +Y ++ L+ Y + E+EI+ G
Sbjct: 1041 ASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGH 1100
Query: 1076 LRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDP----------LNRRMMA 1109
+ S Y ++K G++K+R+ S +L+KE ++ FE + + A
Sbjct: 1101 IWSMPKY---TSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKA 1160
BLAST of Cucsa.197050 vs. TAIR10
Match:
AT2G19930.1 (AT2G19930.1 RNA-dependent RNA polymerase family protein)
HSP 1 Score: 130.2 bits (326), Expect = 8.0e-30
Identity = 162/617 (26.26%), Postives = 258/617 (41.82%), Query Frame = 1
Query: 435 SKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQ-----------------LRSNSVW 494
S Y + Y + ++GI+IG +R++F F +R++S
Sbjct: 256 SSTYSIDHYFTYKGIAKNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKKVKCYFIRTDSTA 315
Query: 495 MFASSDN--LKAEEIRQWMGCFEKIRSISKCAARMGQ--LFSSSTQTLVVPTRDVEI--I 554
+ + L + I + F + A M + L S T+TL V + I
Sbjct: 316 FYDMQNPYILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDQI 375
Query: 555 PDIEVNT-DGIDYC--------FSDGIGKISLSFARQ---------------VADKCGVN 614
DI + DG D SDG G IS AR + + C
Sbjct: 376 DDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEAC-YQ 435
Query: 615 HIPSAFQIR--YGGY--KGVIAVDRNSF-RKLSLRDSMLK---------FESKNKMLNVT 674
P Q R Y GY KG +++ R + +R SM+K F + N + VT
Sbjct: 436 DPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVT 495
Query: 675 KCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDVALNVLENFHGAD 734
L++ + LLS G+ +E F + L K + +K ALN N+ D
Sbjct: 496 TSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMD 555
Query: 735 SNNILVQMLNHGY---EPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDET 794
N QM+ G EP+++ YLS++L+ +DL++ ++ V + L+G +D T
Sbjct: 556 DQNA-AQMILVGIPLDEPHLKNYLSILLKTEK----NDLKAG-KLPVTESYYLMGTVDPT 615
Query: 795 GILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCLHPGDVRVLEAI 854
G L +V C+ L ++ G+V+V +NP LH GD+ +L+A
Sbjct: 616 GALKEDEV--CVILESGQIS------------------GEVLVYRNPGLHFGDIHILKAT 675
Query: 855 FHVELEEK--GLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWD----ENLIPPK---- 914
+ LEE + FPQKG R +E +GGD DGD+YFIS + EN P +
Sbjct: 676 YVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVS 735
Query: 915 -TEAPMDYTGRRPRIMDHDVKLEEIQKFFV--DYMINDTLGAISTAHLVHADR------- 966
T +GR P + + EE+ + F+ + ++ +G + + L DR
Sbjct: 736 LTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDD 795
BLAST of Cucsa.197050 vs. TAIR10
Match:
AT2G19920.1 (AT2G19920.1 RNA-dependent RNA polymerase family protein)
HSP 1 Score: 115.9 bits (289), Expect = 1.6e-25
Identity = 153/597 (25.63%), Postives = 250/597 (41.88%), Query Frame = 1
Query: 443 YHRIMTVLRDGIVIGAKRFEFLAFS----ASQLRSNSVWMF----------ASSDN---- 502
Y + + ++GI++G +R++F F A + + NS ASSD
Sbjct: 268 YSKYKEIAKNGIMVGLRRYQFFVFKDGGKAEKKKRNSTKQVKCYFIRTGSTASSDMENPY 327
Query: 503 -LKAEEIRQWMGCFEKIRSISKCAARMGQ--LFSSSTQTLVVPTRDVEI--IPDI----E 562
L I + F + ++ A M + L S T+ L V ++ + I DI +
Sbjct: 328 ILSGMSIHEARMHFMHVHTLPSPANYMARFSLILSKTKKLEVDMTEITVMQIDDIHCHDQ 387
Query: 563 VNTDGIDY-----CFSDGIGKISLSFARQ---------------VADKCGVNHIPSAFQI 622
N D +D SDG G IS AR + C V P QI
Sbjct: 388 SNNDVLDKNGKPRIHSDGTGYISEDLARMCPLNIFKGKSMRSNNIQGTC-VQEPPLLIQI 447
Query: 623 RY----GGYKGVIAVDRN-SFRKLSLRDSMLK---------FESKNKMLNVTKCCDSMPC 682
R KG+ +++N + + +R SM+K F + N + VT
Sbjct: 448 RMFNDGSAVKGIFLLNKNLPPQTVQVRPSMIKVYKDKNLSNFSTFNSLEVVTTSNPPKRA 507
Query: 683 YLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDVALNVLENFHGADSNNILVQM 742
L++ + LLS GV ++ F + L K + A ++ D N L QM
Sbjct: 508 KLSKNLVALLSYGGVPNDFFLDILLNTLEKKKTIFFKVRAAGKAALHYGNMDDKNAL-QM 567
Query: 743 LNHGY---EPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQV 802
+ G EP ++ YLS +L+ DL++ ++ + + L+G +D TG L +V
Sbjct: 568 IMAGIPLDEPYLKHYLSKLLKLEK----DDLKAG-KLPIDESYYLMGTVDPTGELKEDEV 627
Query: 803 YACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEK 862
L KS+ V+V +NP LH GD+ +L+A + LE+
Sbjct: 628 SG---LAKSQ---------------------DVLVYRNPGLHFGDIHILKATYVKSLEQY 687
Query: 863 --GLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLI-------PPKTEAPMD--Y 922
+ FPQKG R +E +GGD DGD+YFIS + L+ P + +P Y
Sbjct: 688 VGNSKYGVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHYKPSEPWVSSSPRSKIY 747
Query: 923 TGRRPRIMDHDVKLEEIQKFFV--DYMINDTLGAISTAHLVHADR---------EPKKAL 954
TGR+P + + EE+ K F+ + + +G + + L DR + K +
Sbjct: 748 TGRQPSELSPEQLEEELFKIFLKTGFSPSSVIGQAADSWLAIMDRFLTLGDENVKEKAEM 807
BLAST of Cucsa.197050 vs. NCBI nr
Match:
gi|525507142|ref|NP_001267608.1| (RNA-dependent RNA polymerase 2-like [Cucumis sativus])
HSP 1 Score: 2249.2 bits (5827), Expect = 0.0e+00
Identity = 1115/1117 (99.82%), Postives = 1117/1117 (100.00%), Query Frame = 1
Query: 1 MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT
Sbjct: 1 MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 61 LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120
LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS
Sbjct: 61 LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120
Query: 121 VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLK 180
VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLK
Sbjct: 121 VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLK 180
Query: 181 YAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
YAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL
Sbjct: 181 YAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
Query: 241 QASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ 300
QASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ
Sbjct: 241 QASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ 300
Query: 301 KISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPP 360
KISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPP
Sbjct: 301 KISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPP 360
Query: 361 SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL 420
SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL
Sbjct: 361 SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL 420
Query: 421 PAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 480
PAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFA
Sbjct: 421 PAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 480
Query: 481 SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDG 540
SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDG
Sbjct: 481 SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDG 540
Query: 541 IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM
Sbjct: 541 IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
Query: 601 LKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKD 660
LKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKD
Sbjct: 601 LKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKD 660
Query: 661 VALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720
VALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG
Sbjct: 661 VALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720
Query: 721 RILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCLH 780
RILLGCLDETGILNYGQVYACITLTKSELQ+RNQNYFHTIDETKSILLGKVVVTKNPCLH
Sbjct: 721 RILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSILLGKVVVTKNPCLH 780
Query: 781 PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK 840
PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK
Sbjct: 781 PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK 840
Query: 841 TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 900
TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC
Sbjct: 841 TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 900
Query: 901 LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI 960
LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI
Sbjct: 901 LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI 960
Query: 961 EQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1020
EQERSRLVWSEEAARAIYD+DLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI
Sbjct: 961 EQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1020
Query: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHV 1080
LMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHV
Sbjct: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHV 1080
Query: 1081 TYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKRHQA 1118
TYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKRHQA
Sbjct: 1081 TYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKRHQA 1117
BLAST of Cucsa.197050 vs. NCBI nr
Match:
gi|659105491|ref|XP_008453109.1| (PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo])
HSP 1 Score: 2206.0 bits (5715), Expect = 0.0e+00
Identity = 1090/1117 (97.58%), Postives = 1105/1117 (98.93%), Query Frame = 1
Query: 1 MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT
Sbjct: 1 MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
Query: 61 LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120
LEAKAKAM+LSVQN+LVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS
Sbjct: 61 LEAKAKAMALSVQNNLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120
Query: 121 VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLK 180
VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTG+CLGEEKLNALL KLK
Sbjct: 121 VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGYCLGEEKLNALLFKLK 180
Query: 181 YAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
YAPRIYKKISGSNMAS+FSSTRYRLC+EDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL
Sbjct: 181 YAPRIYKKISGSNMASKFSSTRYRLCVEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
Query: 241 QASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ 300
QASDIFS FPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ
Sbjct: 241 QASDIFSYFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ 300
Query: 301 KISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPP 360
KISL+AANQDLIDFLCTLDIDTALNVLQRLHQLKF+CYDPLSFLKTQLHV+KRNCKSLP
Sbjct: 301 KISLAAANQDLIDFLCTLDIDTALNVLQRLHQLKFICYDPLSFLKTQLHVFKRNCKSLPL 360
Query: 361 SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL 420
SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL
Sbjct: 361 SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL 420
Query: 421 PAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 480
PAGAVTTSIQRGILSKPYRT IYHRI+T+LRDGIVIGAKRFEFLAFSASQLRSNSVWMFA
Sbjct: 421 PAGAVTTSIQRGILSKPYRTNIYHRIVTILRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 480
Query: 481 SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDG 540
SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPT+DVEIIPDIEVN+DG
Sbjct: 481 SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540
Query: 541 IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM
Sbjct: 541 IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
Query: 601 LKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKD 660
LKFESKNKMLNVTKCCDSMPCYLNREI TLLSTLGVKDESFEALQQEQLHLLKRMLTDK
Sbjct: 601 LKFESKNKMLNVTKCCDSMPCYLNREIVTLLSTLGVKDESFEALQQEQLHLLKRMLTDKA 660
Query: 661 VALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720
VALNVLEN HGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG
Sbjct: 661 VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720
Query: 721 RILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCLH 780
RILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSIL+GKVVVTKNPCLH
Sbjct: 721 RILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILIGKVVVTKNPCLH 780
Query: 781 PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK 840
PGDVRVLEAIFHVELEEKGLVDCLIFPQKG RPHTNECSGGDLDGDLYFISWDENLIPPK
Sbjct: 781 PGDVRVLEAIFHVELEEKGLVDCLIFPQKGPRPHTNECSGGDLDGDLYFISWDENLIPPK 840
Query: 841 TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 900
TEAPMDYTGRRPRIMDHDV LEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC
Sbjct: 841 TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 900
Query: 901 LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI 960
LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAA+KSI
Sbjct: 901 LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAIKSI 960
Query: 961 EQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1020
EQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI
Sbjct: 961 EQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1020
Query: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHV 1080
LMGDLRSRASYLQRDNRKYGDMKDRILLSVK+LRKEVKEWFENSCDP RRMMASAWYHV
Sbjct: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKSLRKEVKEWFENSCDPHQRRMMASAWYHV 1080
Query: 1081 TYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKRHQA 1118
TYHPSYFKEDMFYFSFPWAVSDVLLNIKA NSKRHQA
Sbjct: 1081 TYHPSYFKEDMFYFSFPWAVSDVLLNIKATNSKRHQA 1117
BLAST of Cucsa.197050 vs. NCBI nr
Match:
gi|595861321|ref|XP_007211312.1| (hypothetical protein PRUPE_ppa000513mg [Prunus persica])
HSP 1 Score: 1603.6 bits (4151), Expect = 0.0e+00
Identity = 772/1115 (69.24%), Postives = 933/1115 (83.68%), Query Frame = 1
Query: 1 MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60
MA ER T+RVSN+P++ A++LL+FL SKLG DSVFA+EI ++ KNWKSRG GRVQFTT
Sbjct: 1 MALAERPTVRVSNIPQTVTAKELLSFLQSKLGTDSVFAVEIISDHKNWKSRGFGRVQFTT 60
Query: 61 LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120
LEAK++A SLS+QN LVF +++LR S DDI+ RPV R VLH GFM+K + MS
Sbjct: 61 LEAKSEAYSLSLQNGLVFKSESLRLSETYDDIIQRPVDPKRRLNGTVLHAGFMVKGDCMS 120
Query: 121 VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLK 180
+LESWEGV+AW+MPER+R+EFW+W ECYKLE+ FE I+E+ G LG EK+NALLLKLK
Sbjct: 121 MLESWEGVRAWVMPERKRVEFWVWLRDECYKLEIAFENIMESFGCRLGGEKVNALLLKLK 180
Query: 181 YAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
+ PRI++KISG N+A+RFS+ RY +C +D+D+LWVRTT+FS M+S+G STSFCWE+EE+
Sbjct: 181 FGPRIFRKISGPNVAARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFCWEIEEEF 240
Query: 241 QASDIFSCFPFYKETQK-DIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHM 300
SD+F CFP+YK+ D++L++GE++CS SE VPL+K S L YE+ +QLN+LVH
Sbjct: 241 SVSDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLVKCRSDSKLPYEILFQLNALVHS 300
Query: 301 QKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLP 360
QKISL+A + DLI+FL L +DT +L++LH+ K CYDPLSFLK QLHV +RN KS P
Sbjct: 301 QKISLAATDSDLIEFLSGLSVDTTNVLLEKLHKRKTTCYDPLSFLKMQLHVLERNHKSRP 360
Query: 361 PSSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSK 420
++ + +NVM+C+RVL+TPS+I CLGPELE SNYVVKNF++YASDFMRVTFV+EDWSK
Sbjct: 361 SPYKRLMEHNVMSCHRVLITPSKICCLGPELEKSNYVVKNFAAYASDFMRVTFVDEDWSK 420
Query: 421 LPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMF 480
LPA A++TSIQ+GI +KP+RT IYHR++++LRDGIVIG KRFEFLAFSASQLRS+SVWMF
Sbjct: 421 LPANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIGEKRFEFLAFSASQLRSSSVWMF 480
Query: 481 ASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTD 540
+S+DN+KAE+IR+WMGCF KIRSISKCAARMGQLFSSSTQTLVVP +DVEIIPD+E ++D
Sbjct: 481 SSNDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSSTQTLVVPAQDVEIIPDVETSSD 540
Query: 541 GIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDS 600
G+ YCFSDGIGKISLSFAR+VA KCG++ PSAFQIRYGGYKGVIAVD SFRKLSLR S
Sbjct: 541 GVTYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSFRKLSLRSS 600
Query: 601 MLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDK 660
MLKFESKN+MLNVTK D+MPCYLNREI +LLSTLGVKDE+FEALQ+EQL LL +M T++
Sbjct: 601 MLKFESKNRMLNVTKWSDAMPCYLNREIISLLSTLGVKDETFEALQEEQLRLLGKMRTER 660
Query: 661 DVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPK 720
ALNV E +GADS N LV+ML HGYEPN EPYLSMMLQA+Y N SDL+SRCRIFVPK
Sbjct: 661 GAALNVFERLNGADSKNTLVKMLLHGYEPNAEPYLSMMLQAYYENHLSDLKSRCRIFVPK 720
Query: 721 GRILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCL 780
GR+L+GCLDETG L+YGQVY IT+TK+E + +Q++F +DET ++ GKVVVTKNPCL
Sbjct: 721 GRVLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFFQKVDETTLVVTGKVVVTKNPCL 780
Query: 781 HPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPP 840
HPGDVRVL+A++ V LEEK +VDCLIFPQKG RPH NECSGGDLDGDL+FISWD++L+P
Sbjct: 781 HPGDVRVLDAVYDVVLEEKNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWDKDLVPS 840
Query: 841 KTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAK 900
T PMDY+ RRPRIMDH V LEEIQKFFVDYMIND LGAISTAHLVHAD EP KAL+ K
Sbjct: 841 HTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDNLGAISTAHLVHADHEPDKALNPK 900
Query: 901 CLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKS 960
CL+LA LHSMAVDFAKTGAPAEM R LKP+EFPDFMER DKPMYIS+ LGKLYRA V S
Sbjct: 901 CLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAVVGS 960
Query: 961 IEQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDE 1020
+ QE++ LVWSE+ A A YD DLEVDG E+ LE+A+ +++MYIEKM +MNYYGA EDE
Sbjct: 961 VLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDMYIEKMRTMMNYYGAVTEDE 1020
Query: 1021 ILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYH 1080
IL G+LR+RA+YLQRDNR+YGDMKDRI LS+KNL+KE K FE+SC + MASAWYH
Sbjct: 1021 ILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGLFESSCPVSEHQRMASAWYH 1080
Query: 1081 VTYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKR 1115
VTYHPSYF++DM SFPW V D+LLNIKA+N+ R
Sbjct: 1081 VTYHPSYFQQDMNCLSFPWIVGDILLNIKALNNPR 1115
BLAST of Cucsa.197050 vs. NCBI nr
Match:
gi|802652425|ref|XP_012080101.1| (PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Jatropha curcas])
HSP 1 Score: 1593.6 bits (4125), Expect = 0.0e+00
Identity = 769/1111 (69.22%), Postives = 926/1111 (83.35%), Query Frame = 1
Query: 5 ERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAK 64
ER T R++++P++ IA+DLL +L S+LG DSVFAIEI TERKNWKSRG GRVQF+TLE +
Sbjct: 9 ERPTARLTSIPQTVIAEDLLQYLESQLGQDSVFAIEICTERKNWKSRGFGRVQFSTLEFR 68
Query: 65 AKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMSVLES 124
KA SL +QN LVF + L S DDI+ RP+ +R ENGVL+ GFM +E + VLES
Sbjct: 69 HKAQSLCLQNKLVFKSHYLLVSDTYDDIIPRPIKPQHRQENGVLYAGFMKQERCLCVLES 128
Query: 125 WEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLKYAPR 184
WE V+ W+MPERRR+EFW+W +++CYK+E+ FE++ + G CLG +K+NA+LLKL+Y PR
Sbjct: 129 WEDVRGWLMPERRRVEFWLWVDKDCYKVEIRFEDVKDAVGFCLGGDKVNAVLLKLRYGPR 188
Query: 185 IYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQASD 244
IYK+ISG ++AS+FS+ RY +C ED+D++WVRT +FS ++S+G+STSFCWEVEE L ASD
Sbjct: 189 IYKRISGPDVASKFSADRYHICKEDFDFIWVRTADFSSVKSIGKSTSFCWEVEEGLDASD 248
Query: 245 IFSCFPFYKETQKDIVLEDGEEFCS-TSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKIS 304
IF+ FP+Y E ++DIVLEDGE+F TSE+VPL S LAYE+ +QLNSLVH KIS
Sbjct: 249 IFTSFPYYVEDRRDIVLEDGEKFHPITSEMVPLAGYESDSKLAYEIFFQLNSLVHTHKIS 308
Query: 305 LSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQ 364
L+A + DL L +L IDTA+ +LQ+LH+L F CYDP+SF+K QLH +RN K S +
Sbjct: 309 LAAVDTDLFKILGSLTIDTAMAILQKLHKLTFTCYDPVSFVKKQLHAPRRNLKKPSSSQK 368
Query: 365 KRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAG 424
+N+M C+R L+TPS+IYCLGPELE+SNYVVKNF+SYASDFMRVTFVEEDWSKLP
Sbjct: 369 SSTDHNIMICHRALITPSKIYCLGPELESSNYVVKNFASYASDFMRVTFVEEDWSKLPVN 428
Query: 425 AVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASSD 484
A++TSIQ GI +KP+RT+IY RI++VLRDGIVIGAKRFEFLAFSASQLRSNSVWMFAS+D
Sbjct: 429 AISTSIQHGIFAKPFRTKIYERILSVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASND 488
Query: 485 NLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDY 544
N+KAE+IRQWMGCF KIRSISKCAARMGQLFS+S QT VVP DVEIIPDIEV +DGI Y
Sbjct: 489 NVKAEDIRQWMGCFNKIRSISKCAARMGQLFSASKQTFVVPAEDVEIIPDIEVTSDGIGY 548
Query: 545 CFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKF 604
CFSDGIGKISLSFA+QVA KCG+NH PSAFQIRYGG+KGVIAVDRNS RKLSLR SMLKF
Sbjct: 549 CFSDGIGKISLSFAQQVAQKCGLNHTPSAFQIRYGGFKGVIAVDRNSLRKLSLRSSMLKF 608
Query: 605 ESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDVAL 664
ES+N+MLNVTK DSMPCYLNREI TLLSTLGVKDE F+ LQQ+QLHLL RML D++ AL
Sbjct: 609 ESENRMLNVTKWSDSMPCYLNREIVTLLSTLGVKDEIFQGLQQQQLHLLGRMLNDREAAL 668
Query: 665 NVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRIL 724
+VLEN DS NI+V+ML GY+PN+EPYLSMMLQA++ NL +LRSRCR+FVPKGRIL
Sbjct: 669 DVLENLAWVDSRNIMVKMLLQGYKPNVEPYLSMMLQAYHENLLVELRSRCRVFVPKGRIL 728
Query: 725 LGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKNPCLHPGD 784
+GCLDE GIL+YGQ+Y +TL+KSELQN +Q++F +DET SI+ GKVVVTKNPCLHPGD
Sbjct: 729 IGCLDEEGILDYGQIYVRVTLSKSELQNADQSFFRKVDETTSIVTGKVVVTKNPCLHPGD 788
Query: 785 VRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPKTEA 844
VRVLEA++ V LEEKGLVDC++FPQKG RPH NECSGGDLDGDL+FISWDE+LIP +TE+
Sbjct: 789 VRVLEAVYEVGLEEKGLVDCILFPQKGERPHPNECSGGDLDGDLFFISWDEDLIPSQTES 848
Query: 845 PMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKCLEL 904
PMDY GRRPRIMDHDVKLEEI KFFVDYMINDTLGAISTAHLVHADREP KA S KCL+L
Sbjct: 849 PMDYLGRRPRIMDHDVKLEEIHKFFVDYMINDTLGAISTAHLVHADREPDKARSRKCLKL 908
Query: 905 AALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQE 964
A LHSMAVDFAKTGAPAEMPR LKP+EFPDFMERFDK YIS VLGKLYR + S Q
Sbjct: 909 AELHSMAVDFAKTGAPAEMPRALKPKEFPDFMERFDKSTYISDAVLGKLYRGTLDSTLQG 968
Query: 965 RSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEILMG 1024
R++ +WSE+ A A YD +LEV+GF F++IA +K MY+EK+S LMNYY A+ EDE+L G
Sbjct: 969 RTKFIWSEKIAEATYDCNLEVEGFMEFIDIAANHKYMYMEKLSGLMNYYEAKNEDEMLTG 1028
Query: 1025 DLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHVTYH 1084
+LR++A YLQRDNR+YGD KDRILLS+K+L+KE KEWFE+SC P ++ +ASAWYHVT H
Sbjct: 1029 NLRNKAMYLQRDNRRYGDTKDRILLSMKSLQKEAKEWFESSCRPSTQQCLASAWYHVTCH 1088
Query: 1085 PSYFKEDMFYFSFPWAVSDVLLNIKAMNSKR 1115
P+YF+E + FPW V D+LLNIK ++K+
Sbjct: 1089 PNYFQEGITCLGFPWIVGDILLNIKTASNKK 1119
BLAST of Cucsa.197050 vs. NCBI nr
Match:
gi|641850851|gb|KDO69723.1| (hypothetical protein CISIN_1g001183mg [Citrus sinensis])
HSP 1 Score: 1586.2 bits (4106), Expect = 0.0e+00
Identity = 772/1127 (68.50%), Postives = 935/1127 (82.96%), Query Frame = 1
Query: 7 STLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKAK 66
+T+ VSN+P++AIA+DLL FL SKLG +SVFA+EI T+R NWKSRG GRVQFT+L+ K+K
Sbjct: 4 ATVWVSNIPQTAIAKDLLLFLESKLGKNSVFALEIITDRSNWKSRGIGRVQFTSLDFKSK 63
Query: 67 AMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMSVLESWE 126
A +LS+ + LVF +QNL+ S + DIV RPV A +R E+GVLHVG M KEER+ VL+++E
Sbjct: 64 AQNLSLNDKLVFNSQNLKISETHSDIVPRPVKAQHRVEDGVLHVGVMCKEERLRVLQTFE 123
Query: 127 GVKAWIMPERRRIEFWIW--HEQE---------------CYKLEVMFEEILETTGHCLGE 186
GV+ W++P+RRR+EFW+W H E C+K+E++FE++LET G L E
Sbjct: 124 GVRGWLLPDRRRLEFWVWPKHNGEWQKGIQECQSDSSDCCFKVEILFEDVLETVGFSLDE 183
Query: 187 -EKLNALLLKLKYAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQ 246
+N +L KLKY P+IY+K+SG ++AS+F S RY +C ED+D+ WVRTT+FS +S+G
Sbjct: 184 GATVNGILFKLKYGPKIYQKVSGPHVASKFPSDRYHICKEDFDFFWVRTTDFSVTKSIGC 243
Query: 247 STSFCWEVEEDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYE 306
STSF WE++ L ASDI + FPFYKE + D++LE+GEEFC+TSEIVPL+K G NL++E
Sbjct: 244 STSFFWEIKNGLLASDISNIFPFYKEDKTDLILEEGEEFCTTSEIVPLVKCRPGFNLSHE 303
Query: 307 VEYQLNSLVHMQKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQL 366
V +QLNSLVH QK+SL AA+ +LI L L ++TAL VLQ+LH+LK +CYDP+SF+KTQL
Sbjct: 304 VLFQLNSLVHNQKVSLVAADAELIQILSGLSMETALMVLQKLHKLKSICYDPVSFVKTQL 363
Query: 367 HVYKRNCKSLPPSSQKRL-SNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDF 426
HV RNCKS+P SS KRL +NVM+CYR LVTP +IYCLGPELETSNYVVKNF+ YASDF
Sbjct: 364 HVLGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPELETSNYVVKNFAKYASDF 423
Query: 427 MRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFS 486
MRVTFVEEDWSKLPA A++TSIQRGI SKPYRT+IY RI+T+L+DGIVIG K +EFLAFS
Sbjct: 424 MRVTFVEEDWSKLPANALSTSIQRGIFSKPYRTKIYSRILTILQDGIVIGDKHYEFLAFS 483
Query: 487 ASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRD 546
ASQLR+NSVWMFAS+D + AE++R WMGCF KIRS+SKCAARMGQLFSSS QTLVVP +D
Sbjct: 484 ASQLRNNSVWMFASNDEVSAEDVRGWMGCFNKIRSVSKCAARMGQLFSSSKQTLVVPVQD 543
Query: 547 VEIIPDIEVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVD 606
VE+IPD+EV +DG YCFSDGIGKISLSFARQVA KCG++H PSAFQIRYGGYKGVIAVD
Sbjct: 544 VEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVIAVD 603
Query: 607 RNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQE 666
RNSFRKLSLR SMLKFES+N+MLNVTK +SMPC+LNREI +LLSTLGVKDE FEA+QQ+
Sbjct: 604 RNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIISLLSTLGVKDEVFEAMQQQ 663
Query: 667 QLHLLKRMLTDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFS 726
QL LL +ML +++ AL+VL+ +G DS NILV+ML GYEPN+EPYLSMML +H+ N S
Sbjct: 664 QLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPNVEPYLSMMLLSHHENQLS 723
Query: 727 DLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSIL 786
DL+SRCRI+VPKGR+L+GC DETGILNYGQV+ +T+T+ EL++++Q++FH +D+ SI+
Sbjct: 724 DLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELESKDQSFFHRVDDKTSIV 783
Query: 787 LGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDL 846
GKV+VTKNPCLHPGDVRVLEA++ ++LEEK VDC+IFPQKG RPH NECSGGDLDGD+
Sbjct: 784 KGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQKGERPHPNECSGGDLDGDI 843
Query: 847 YFISWDENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVH 906
+FISWD +LIP +TE PMDYTGRR RIMDHDV LEEI KFFVDYMINDTLGAISTAHLVH
Sbjct: 844 FFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMINDTLGAISTAHLVH 903
Query: 907 ADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSN 966
ADR+P KA S+KCL LA LHSMAVDFAKTGAPAEMP LKP+EFPDFMER DKP YIS
Sbjct: 904 ADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLALKPKEFPDFMEREDKPRYISFG 963
Query: 967 VLGKLYRAAVKSIEQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSI 1026
VLGKLYRA + SI Q RS +WSE+ A A YDHDLEVDGFEAFL +AE++KEMY E+M+
Sbjct: 964 VLGKLYRATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEMYEEEMNA 1023
Query: 1027 LMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDP 1086
LMNYYGA EDEIL G+LR+RASYLQRDNR+YGDMKDRILLS KNL+ E KEWF +SC
Sbjct: 1024 LMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNEAKEWFGSSCKE 1083
Query: 1087 LNRRMMASAWYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKR 1115
+ASAWYHVTY PSY KE M SFPW V D+LLNIK++NS++
Sbjct: 1084 NEHPQLASAWYHVTYSPSYCKERMALLSFPWIVGDILLNIKSVNSRK 1130
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RDR2_ARATH | 0.0e+00 | 60.22 | RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana GN=RDR2 PE=1 SV=1 | [more] |
RDR2_ORYSJ | 0.0e+00 | 51.30 | Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 ... | [more] |
RDR1_ARATH | 3.1e-217 | 40.61 | RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana GN=RDR1 PE=2 SV=1 | [more] |
RDR1_ORYSJ | 1.1e-177 | 46.69 | Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 ... | [more] |
SHL2_ORYSJ | 3.1e-148 | 36.18 | Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SH... | [more] |
Match Name | E-value | Identity | Description | |
E9NWK9_CUCSA | 0.0e+00 | 99.82 | RNA-dependent RNA polymerase 2 OS=Cucumis sativus GN=Csa_1G005580 PE=2 SV=1 | [more] |
M5WGW0_PRUPE | 0.0e+00 | 69.24 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000513mg PE=4 SV=1 | [more] |
A0A067K4I1_JATCU | 0.0e+00 | 69.22 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11502 PE=4 SV=1 | [more] |
A0A067FQX3_CITSI | 0.0e+00 | 68.50 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001183mg PE=4 SV=1 | [more] |
W9S7I8_9ROSA | 0.0e+00 | 67.00 | RNA-dependent RNA polymerase 2 OS=Morus notabilis GN=L484_002118 PE=4 SV=1 | [more] |