Cucsa.195160 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.195160
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionF1-ATP synthase delta subunit
Locationscaffold01349 : 123041 .. 125759 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTCGCTAGTCGCATCAAATCAACTATCTCTGTCCTCACCAAGGTTTGAGATCCCAATCCTCCTGTACTCCCCTACTCCATCTCACTTTTTCCATCTTCTCTGTCCCTCACATTTATTTCCGCTTTTCCTTACCATTCCAAATATGCTTCTCCTGTTCCTTCCGCTCAATTGTGGAGGCCTTGTACTCTGTATTCTTGGGTTTAGGATTTACTGGAACTTATATATATTCTGTTCGGTTGCCAGTGgAAaGGGAATCATGATCATGAGGACATAATTCTGATTATCTGAGCTAGTGTATTGGGAGTGTGTGCGTATGTGGGTGGGTGGTAACGTTTCGAAAAGTCGTGGAATTTGTGATGAATTGGTATAATTTGAGGTTCGTGTTTAGGGTGGTTATGCATTTTTAGCAAATTGAAGATGTCATTTTCTTTGCTAAACAAGTTTGACAGGGTGTTTAGAGCTTCTATTTTCAGTTTCTCTCGATATTGGTCGATGTTTCCGTGAATACAGATGATTTCTTGACTTTTTCACTGGTTTTGTCTGATTATGGTAATATCACCTCAATAATTTCCTTACTAACTTGATGCAGCTCTCAAGAACTTATACCGCTGCATCAGGGAGAAATGAAGGAAAAGTGAAGGTATACCATTACTTATCTTAACTCCTCATATATCATTTTGCTAACAGATTTCTAGAATTACTATCAAATATGTCCTTTGGAACTTAGAGTGCATGTGCAATATATGTTTCTTTTTTTCGAGAAGGAACATTTCATTGGATAAATGAAATAGAGAGGAAATCCCCAAACACCTATAGGTGATTATAGAAGAGATTTCCCATGGGCAATATATGTCTCTTGCTGGCATTCGTTGAAGTTAATTTACAAGCGTGCTTTCTTATCTGCTATATTGGCAGGTGCCTATTGCTTTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTCTGTATCCAGCTGCAATAAAAGCTAATTCTTTAGACAAGGTGGAATTTGAACTTGTTAACCTTGTCCAAGCTGTTAAGAAAAGCCCTACATTTTCTCAGTTCACAATGGACCTGTCAATTCCAGCGAAAACTAGAGTTAAGGCATTGTAGAGAACTTTTTGGGTAGGATTGTTTGCTCTTCTGTGGTTGTGTGGATGAAAACTGACTTTAGCTTTGGCTCCTTTTGTGAGGCACAAATTGTCTGTCAATTTCTATTTCTTACTTTATACTAATTGTCATATTGTCATTGTATTATTTCATACCCTATATAAGATCCGGCTTGAGAGGTATGGAGATTTTTTTCTTTCATGATTGAAGAAGTGAGTGTTATAATATACGGCTTTTGAGATATTTGAGATGGTTAATGGGATTGTTGGTTCTTTTTTTtAAAATTTCATCGACTCACGCATCTTACACTTTGTTCTAATTGATGAAGTACTCATGCTCTGCAAATAAGGATACTGGCTTTTAAAATGCATCACTTCAAGGAGTCTTTTGTGTGTTCTTACTTGGATTTTTTATGATTCGTAATTGTAGTTGTCCTGGCTGAGAATGGGAGGCTGAGATATGTAGATAGCATAGCAAAGAAATTCTTGGAGTTGACCATGGCTCATAGGGGAGAAGTTAAAGCCATTGTTACAACTGTTATTGTAAGCTTCTCTTTCACTGTGCTTTTTGTTTtCTTTTAGTTCAGGTAAAAACCAACTTCTTATCTACAGAGTTCAATGTGCGAAGTGATTGAATATGTTTAGCATTAACTTATGCAAAGTGATATCTGTGTCTAAGGGATGACGGATAACCCATTTAAATTTGGCAACTGATTTGTGGATGTCGCAGGATGCCTTTTATATAAGTGTGTTTAGAAGCCTTTTGCAATAATTTACTTCTGTTTATATTTCTAGCCTATTGATATCAGCAATTCGTTGATCATCTATGAAAAGGTTAATCACATAAAATACTTGGAGAAGTAGAGTTGTTGATATTTAAAATTAATTGGTTTTTTATTGAATCAGCACATGGCTCTCGGTGCGTTGTAGTTCTTCATAGGGTTTTATCTCCTTAGACCCTGTTTGGTAATGGTAACCATTTCATTTTTGGCTTTTGACAATCAATCATATTTTCTTCCCTTTTCATACAATGATGTGCATTTTtCTTAAGTACTATGGTTGAATTCTTAGTTTAAATTCAAAAACAAAAACAAGTTTTTAATAGCTACTTTTTTttAGTTTTtAAATTTtAACTTGATTTTTtAAACCATTGGTAAATAGTAGATAACAAGTGAAAAAATTTGGAAGTAGAAGTAATGTCTATATGCTTGGTTTCAAAAaCAAAATGGTTACTAAACAAGGCTTTAGGATTTCAGTGTTCTAACCAGACAAAAGTAAAATAAAATATTAAATTGTATAAACCTCAATACACATTACAACTGATTTGTGATTTACCAGCCCATTCCAGCACAAGAAGAGAAAGAATTGAAGGAGACAATGCAAGATATAATTGGACAAGGCAAGAAGGTTAAGCTCGAGCAGAAGGTACTTTGATTGGAAACTTTTTtAGGTTTTtCAATTTTATGAATATAGCATGCCTTCTTGAGAAATTCAAACACTGCTCTTGTATTTGCCAGATCGATCCCAACATCCTTGGTGGTCTAGTTGTAGAATTTGGCGAGAAGGTGTTTGATATGTCCATTAAAACACGGGCACTTCAAATAAAG

mRNA sequence

ATGGCGTTCGCTAGTCGCATCAAATCAACTATCTCTGTCCTCACCAAGCTCTCAAGAACTTATACCGCTGCATCAGGGAGAAATGAAGGAAAAGTGAAGGTGCCTATTGCTTTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTCTGTATCCAGCTGCAATAAAAGCTAATTCTTTAGACAAGGTGGAATTTGAACTTGTTAACCTTGTCCAAGCTGTTAAGAAAAGCCCTACATTTTCTCAGTTCACAATGGACCTGTCAATTCCAGCGAAAACTAGAGTTAAGGCATTTACTCATGCTCTGCAAATAAGGATACTGGCTTTTAAAATGCATCACTTCAAGGAGTCTTTTGTGTTTGTCCTGGCTGAGAATGGGAGGCTGAGATATGTAGATAGCATAGCAAAGAAATTCTTGGAGTTGACCATGGCTCATAGGGGAGAAGTTAAAGCCATTGTTACAACTGTTATTCCCATTCCAGCACAAGAAGAGAAAGAATTGAAGGAGACAATGCAAGATATAATTGGACAAGGCAAGAAGGTTAAGCTCGAGCAGAAGATCGATCCCAACATCCTTGGTGGTCTAGTTGTAGAATTTGGCGAGAAGGTGTTTGATATGTCCATTAAAACACGGGCACTTCAAATAAAG

Coding sequence (CDS)

ATGGCGTTCGCTAGTCGCATCAAATCAACTATCTCTGTCCTCACCAAGCTCTCAAGAACTTATACCGCTGCATCAGGGAGAAATGAAGGAAAAGTGAAGGTGCCTATTGCTTTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTCTGTATCCAGCTGCAATAAAAGCTAATTCTTTAGACAAGGTGGAATTTGAACTTGTTAACCTTGTCCAAGCTGTTAAGAAAAGCCCTACATTTTCTCAGTTCACAATGGACCTGTCAATTCCAGCGAAAACTAGAGTTAAGGCATTTACTCATGCTCTGCAAATAAGGATACTGGCTTTTAAAATGCATCACTTCAAGGAGTCTTTTGTGTTTGTCCTGGCTGAGAATGGGAGGCTGAGATATGTAGATAGCATAGCAAAGAAATTCTTGGAGTTGACCATGGCTCATAGGGGAGAAGTTAAAGCCATTGTTACAACTGTTATTCCCATTCCAGCACAAGAAGAGAAAGAATTGAAGGAGACAATGCAAGATATAATTGGACAAGGCAAGAAGGTTAAGCTCGAGCAGAAGATCGATCCCAACATCCTTGGTGGTCTAGTTGTAGAATTTGGCGAGAAGGTGTTTGATATGTCCATTAAAACACGGGCACTTCAAATAAAG

Protein sequence

MAFASRIKSTISVLTKLSRTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLDKVEFELVNLVQAVKKSPTFSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFVLAENGRLRYVDSIAKKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPNILGGLVVEFGEKVFDMSIKTRALQIK
Homology
[Close]
BLAST of Cucsa.195160 vs. Swiss-Prot
Match: ATPO_IPOBA (ATP synthase subunit O, mitochondrial OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.2e-62
Identity = 122/201 (60.70%), Postives = 154/201 (76.62%), Query Frame = 1 

Query: 15  TKLSRTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLDKVEFELVNLVQAVK 74
           ++L R Y  AS   E K+KVP+ ++G SGNYASALY AA+K+N+L+KVE EL +LV+A K
Sbjct: 39  SELLRNYATASASKEQKIKVPLTMYGVSGNYASALYLAAVKSNTLEKVESELYDLVEASK 98

Query: 75  KSPTFSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFVLAENGRLRYVDSIA 134
           KSPTFSQF  D S+P  TRV A            K     ++F+ +LAENGRL+++D I 
Sbjct: 99  KSPTFSQFMRDPSVPVDTRVNAIKEICA----QAKFGDTTQNFLLILAENGRLKHIDRIV 158

Query: 135 KKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPNILGGL 194
           K+F ELTMAHRGEVKA VTTVIP+PA EEKELK T+Q+++GQGK V++EQKIDP ILGGL
Sbjct: 159 KRFKELTMAHRGEVKATVTTVIPLPADEEKELKATLQEMVGQGKSVQIEQKIDPTILGGL 218

Query: 195 VVEFGEKVFDMSIKTRALQIK 216
           VVEFG+KVFDMSI+TRA Q++
Sbjct: 219 VVEFGQKVFDMSIRTRARQME 235

[Close]
BLAST of Cucsa.195160 vs. Swiss-Prot
Match: ATPO_ARATH (ATP synthase subunit O, mitochondrial OS=Arabidopsis thaliana GN=At5g13450 PE=1 SV=2)

HSP 1 Score: 209.5 bits (532), Expect = 3.6e-53
Identity = 107/197 (54.31%), Postives = 145/197 (73.60%), Query Frame = 1 

Query: 19  RTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLDKVEFELVNLVQAVKKSPT 78
           RTY  AS +    VKVPIAL G +GN+AS LY AA+K NSL+K+E +L  +++A+K +P 
Sbjct: 34  RTYATASAQTTANVKVPIALVGENGNFASWLYIAAVKMNSLEKIETDLSEMIEAMKTAPI 93

Query: 79  FSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFVLAENGRLRYVDSIAKKFL 138
           F+QFT D S+P  TR+ A   A        K     ++F+ +LAENG+L+ +D+I KKF+
Sbjct: 94  FAQFTKDPSVPRGTRLAAIRDACD----QAKFAEPTKNFLSLLAENGKLKNLDAIVKKFM 153

Query: 139 ELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPNILGGLVVEF 198
           +LT AHRG+VK +VTTVIP+P  EEKEL ET+Q+IIG GKK+ +EQKIDP+I GGL+VEF
Sbjct: 154 QLTNAHRGDVKVLVTTVIPLPPAEEKELTETLQEIIGAGKKITVEQKIDPSIYGGLIVEF 213

Query: 199 GEKVFDMSIKTRALQIK 216
            +KV DMSI+TRA Q++
Sbjct: 214 QQKVLDMSIRTRAQQME 226

[Close]
BLAST of Cucsa.195160 vs. Swiss-Prot
Match: ATPO_SORAR (ATP synthase subunit O, mitochondrial OS=Sorex araneus GN=ATP5O PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-25
Identity = 70/201 (34.83%), Postives = 109/201 (54.23%), Query Frame = 1 

Query: 11  ISVLTKLSRTYTAASGRNEGK-VKVPIALFGGSGNYASALYPAAIKANSLDKVEFELVNL 70
           +S L++  R+++ +  R   K V+ PI ++G  G YA+ALY AA K N LD+VE EL+ +
Sbjct: 6   VSGLSRQVRSFSTSVARPFAKLVRPPIQIYGVEGRYATALYSAASKQNKLDQVEKELLRV 65

Query: 71  VQAVKKSPTFSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFVLAENGRLRY 130
            Q +K+ P  +   ++  +    +VK+            K+     + + +LAENGRL  
Sbjct: 66  AQLLKE-PKLAASILNPHVKRAIKVKSIGDLTARE----KLSPITTNLINLLAENGRLNN 125

Query: 131 VDSIAKKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPN 190
              I   F  +   HRGEV   VTT   +P     ELK  +Q  + + + +KLE K DP+
Sbjct: 126 TPGIISAFSTMMSVHRGEVPCTVTTASALPEATLSELKTVLQSFLSKNQVLKLEVKTDPS 185

Query: 191 ILGGLVVEFGEKVFDMSIKTR 211
           I+GG++V  GEK  DMS +T+
Sbjct: 186 IMGGMIVRIGEKYVDMSARTK 201

[Close]
BLAST of Cucsa.195160 vs. Swiss-Prot
Match: ATPO_PONAB (ATP synthase subunit O, mitochondrial OS=Pongo abelii GN=ATP5O PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.1e-25
Identity = 69/201 (34.33%), Postives = 110/201 (54.73%), Query Frame = 1 

Query: 11  ISVLTKLSRTYTAASGRNEGK-VKVPIALFGGSGNYASALYPAAIKANSLDKVEFELVNL 70
           +S L++  R ++ +  R   K V+ P+ ++G  G YA+ALY AA K N L++VE EL+ +
Sbjct: 6   VSGLSRQVRCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRV 65

Query: 71  VQAVKKSPTFSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFVLAENGRLRY 130
            Q +K+ P  +   ++  +    +VK+            +      + + +LAENGRL  
Sbjct: 66  AQILKE-PKVAAPVLNPYVKRSIKVKSLNDITAKE----RFSPLTTNLINLLAENGRLSN 125

Query: 131 VDSIAKKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPN 190
              +   F  +  AHRGEV   VT+  P+      ELK  ++  + QG+ +KLE K DP+
Sbjct: 126 TQGVVSAFSTMMSAHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPS 185

Query: 191 ILGGLVVEFGEKVFDMSIKTR 211
           ILGG++V  GEK  DMS+KT+
Sbjct: 186 ILGGMIVRIGEKYVDMSVKTK 201

[Close]
BLAST of Cucsa.195160 vs. Swiss-Prot
Match: ATPO_PIG (ATP synthase subunit O, mitochondrial OS=Sus scrofa GN=ATP5O PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-25
Identity = 69/201 (34.33%), Postives = 110/201 (54.73%), Query Frame = 1 

Query: 11  ISVLTKLSRTYTAASGRNEGK-VKVPIALFGGSGNYASALYPAAIKANSLDKVEFELVNL 70
           +S L++  R ++ +  R   K V+ P+ ++G  G YA+ALY AA K N L++VE EL+ +
Sbjct: 6   VSGLSRQVRCFSTSVVRPFAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRV 65

Query: 71  VQAVKKSPTFSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFVLAENGRLRY 130
            Q +K+ P  +   M+  +    +VK+ +          K      + + +LAENGRL  
Sbjct: 66  AQILKE-PKVAASIMNPYVKRSVKVKSLSDMTAKE----KFSPLTSNLINLLAENGRLSS 125

Query: 131 VDSIAKKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPN 190
              +   F  +   HRGEV   VTT  P+      ELK  ++  + +G+ +KLE K+DP+
Sbjct: 126 TPGVISAFSTMMSVHRGEVPCSVTTASPLDEATLTELKTVLKSFLSKGQILKLEVKVDPS 185

Query: 191 ILGGLVVEFGEKVFDMSIKTR 211
           I+GG++V  GEK  DMS KT+
Sbjct: 186 IMGGMIVRIGEKYVDMSAKTK 201

[Close]
BLAST of Cucsa.195160 vs. TrEMBL
Match: A0A0A0LCE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G696890 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.7e-94
Identity = 193/215 (89.77%), Postives = 196/215 (91.16%), Query Frame = 1 

Query: 1   MAFASRIKSTISVLTKLSRTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLD 60
           MAFASRIKSTISVLTKLSRTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLD
Sbjct: 1   MAFASRIKSTISVLTKLSRTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLD 60

Query: 61  KVEFELVNLVQAVKKSPTFSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFV 120
           KVEFELVNLVQAVKKSPTFSQFTMDLSIPAKTRVKA +    +R+              V
Sbjct: 61  KVEFELVNLVQAVKKSPTFSQFTMDLSIPAKTRVKALSG---LRV--------------V 120

Query: 121 LAENGRLRYVDSIAKKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKV 180
           LAENGRLRYVDSIAKKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKV
Sbjct: 121 LAENGRLRYVDSIAKKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKV 180

Query: 181 KLEQKIDPNILGGLVVEFGEKVFDMSIKTRALQIK 216
           KLEQKIDPNILGGLVVEFGEKVFDMSIKTRALQIK
Sbjct: 181 KLEQKIDPNILGGLVVEFGEKVFDMSIKTRALQIK 198

[Close]
BLAST of Cucsa.195160 vs. TrEMBL
Match: A0A061DVA9_THECC (ATP synthase subunit O, mitochondrial OS=Theobroma cacao GN=TCM_005886 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.5e-69
Identity = 142/214 (66.36%), Postives = 174/214 (81.31%), Query Frame = 1 

Query: 2   AFASRIKSTISVLTKLSRTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLDK 61
           A  S +  T+ +  +LS+ Y+ AS + E KVKVP+ALFGGSGNYASALY AA+K N+L+K
Sbjct: 25  AHRSNLHQTL-LCAELSKNYSTASPKKEVKVKVPLALFGGSGNYASALYLAAVKGNALNK 84

Query: 62  VEFELVNLVQAVKKSPTFSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFVL 121
           VE EL+NLV+A K SPTFSQFT DLS+PA+TRVKA            K     ++F+ VL
Sbjct: 85  VESELLNLVEASKNSPTFSQFTKDLSVPAETRVKAINEICG----QAKFSDVTKNFLVVL 144

Query: 122 AENGRLRYVDSIAKKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKVK 181
           AENGRLRY++SIAK+F+ELTMAH+GEVKAIVTTVIP+P +EEKELKET+Q+IIGQGK+VK
Sbjct: 145 AENGRLRYIESIAKRFVELTMAHKGEVKAIVTTVIPLPPEEEKELKETLQEIIGQGKQVK 204

Query: 182 LEQKIDPNILGGLVVEFGEKVFDMSIKTRALQIK 216
           LEQKIDP+ILGGLVVEF +KVFDMSIKTRA Q++
Sbjct: 205 LEQKIDPSILGGLVVEFSQKVFDMSIKTRAQQME 233

[Close]
BLAST of Cucsa.195160 vs. TrEMBL
Match: M5XET6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010026mg PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 6.3e-65
Identity = 138/243 (56.79%), Postives = 183/243 (75.31%), Query Frame = 1 

Query: 1   MAFASRIKSTISVLTK----------------------------LSRTYTAASGRNEGKV 60
           MAFA+RI+S++ ++TK                            LS+ ++ A G+ E KV
Sbjct: 1   MAFANRIRSSLPLVTKILKSDSLSAAHWSSAQRSVLCPTFANSELSKNFSTAPGKKEVKV 60

Query: 61  KVPIALFGGSGNYASALYPAAIKANSLDKVEFELVNLVQAVKKSPTFSQFTMDLSIPAKT 120
           KVP+ LFGGSGNYASALY AA+KAN+L+KVE E++++V++ K+SPTFSQFT DLS+PA T
Sbjct: 61  KVPLVLFGGSGNYASALYIAAVKANALEKVESEILDIVESTKRSPTFSQFTKDLSVPADT 120

Query: 121 RVKAFTHALQIRILAFKMHHFKESFVFVLAENGRLRYVDSIAKKFLELTMAHRGEVKAIV 180
           RVKA     +I   A K     ++F+ +L++NGRL+ +++IAK+F+ELTMAH+GEVKAIV
Sbjct: 121 RVKAIN---EISAQA-KFSDVTKNFLVLLSQNGRLKNLETIAKRFVELTMAHKGEVKAIV 180

Query: 181 TTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPNILGGLVVEFGEKVFDMSIKTRAL 216
           T+VIP+PA EEKELKET+Q++IGQGKKV LEQKIDP+ILGGLVVEF +KVFDMSIKTRA 
Sbjct: 181 TSVIPLPAVEEKELKETLQELIGQGKKVILEQKIDPSILGGLVVEFDKKVFDMSIKTRAR 239

[Close]
BLAST of Cucsa.195160 vs. TrEMBL
Match: A0A103Y1F0_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021069 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.4e-64
Identity = 130/198 (65.66%), Postives = 161/198 (81.31%), Query Frame = 1 

Query: 18  SRTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLDKVEFELVNLVQAVKKSP 77
           SR + +A    E K+KVP+A+FGGSGNYASALY AA KA +LDKVE EL++LV A +KSP
Sbjct: 46  SRNFASAPAPKEPKIKVPVAMFGGSGNYASALYIAAAKAKTLDKVESELLDLVAASEKSP 105

Query: 78  TFSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFVLAENGRLRYVDSIAKKF 137
           TFSQF  DL++PA TRVKA T          K     ++F+ VLA+NGRLR+VD+IAK+F
Sbjct: 106 TFSQFMKDLAVPADTRVKAITEICD----QAKFSEVTKNFLVVLADNGRLRHVDTIAKRF 165

Query: 138 LELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPNILGGLVVE 197
            +LTMAHRGEVKA+VTTVIP+PA+EEKELK T+Q+I+G+GK VKLEQKIDP+ILGG+VVE
Sbjct: 166 SDLTMAHRGEVKAVVTTVIPLPAEEEKELKSTLQEILGKGKTVKLEQKIDPSILGGIVVE 225

Query: 198 FGEKVFDMSIKTRALQIK 216
           FG+KVFDMSIKTRA Q++
Sbjct: 226 FGQKVFDMSIKTRAKQME 239

[Close]
BLAST of Cucsa.195160 vs. TrEMBL
Match: A0A0A0KBG4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428190 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.1e-64
Identity = 131/201 (65.17%), Postives = 161/201 (80.10%), Query Frame = 1 

Query: 15  TKLSRTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLDKVEFELVNLVQAVK 74
           +++SR Y  +S ++E KVKVP+ LFGG+GNYASALY AA+KANSLDK E ELV+  +A+K
Sbjct: 41  SEISRNYATSSKKSEAKVKVPLVLFGGTGNYASALYLAAVKANSLDKAEKELVDFAEALK 100

Query: 75  KSPTFSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFVLAENGRLRYVDSIA 134
           +S TFSQF  D ++   T+VK  +          K     ++F+ VLAENGRL+YVD IA
Sbjct: 101 RSATFSQFISDPTVHKDTKVKVISDVCADA----KFSEIMKNFLAVLAENGRLKYVDGIA 160

Query: 135 KKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPNILGGL 194
           KKF ELTMAHRGEVKAIV+TVIP+PA+EEKELKET+Q IIG+GKKVKLEQKIDP+ILGG+
Sbjct: 161 KKFQELTMAHRGEVKAIVSTVIPLPAEEEKELKETLQYIIGEGKKVKLEQKIDPSILGGI 220

Query: 195 VVEFGEKVFDMSIKTRALQIK 216
           VVEFGEKVFDMSIKTRA Q++
Sbjct: 221 VVEFGEKVFDMSIKTRAKQME 237

[Close]
BLAST of Cucsa.195160 vs. TAIR10
Match: AT5G13450.1 (AT5G13450.1 delta subunit of Mt ATP synthase)

HSP 1 Score: 209.5 bits (532), Expect = 2.0e-54
Identity = 107/197 (54.31%), Postives = 145/197 (73.60%), Query Frame = 1 

Query: 19  RTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLDKVEFELVNLVQAVKKSPT 78
           RTY  AS +    VKVPIAL G +GN+AS LY AA+K NSL+K+E +L  +++A+K +P 
Sbjct: 34  RTYATASAQTTANVKVPIALVGENGNFASWLYIAAVKMNSLEKIETDLSEMIEAMKTAPI 93

Query: 79  FSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFVLAENGRLRYVDSIAKKFL 138
           F+QFT D S+P  TR+ A   A        K     ++F+ +LAENG+L+ +D+I KKF+
Sbjct: 94  FAQFTKDPSVPRGTRLAAIRDACD----QAKFAEPTKNFLSLLAENGKLKNLDAIVKKFM 153

Query: 139 ELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPNILGGLVVEF 198
           +LT AHRG+VK +VTTVIP+P  EEKEL ET+Q+IIG GKK+ +EQKIDP+I GGL+VEF
Sbjct: 154 QLTNAHRGDVKVLVTTVIPLPPAEEKELTETLQEIIGAGKKITVEQKIDPSIYGGLIVEF 213

Query: 199 GEKVFDMSIKTRALQIK 216
            +KV DMSI+TRA Q++
Sbjct: 214 QQKVLDMSIRTRAQQME 226

[Close]
BLAST of Cucsa.195160 vs. NCBI nr
Match: gi|700203461|gb|KGN58594.1| (hypothetical protein Csa_3G696890 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 2.4e-94
Identity = 193/215 (89.77%), Postives = 196/215 (91.16%), Query Frame = 1 

Query: 1   MAFASRIKSTISVLTKLSRTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLD 60
           MAFASRIKSTISVLTKLSRTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLD
Sbjct: 1   MAFASRIKSTISVLTKLSRTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLD 60

Query: 61  KVEFELVNLVQAVKKSPTFSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFV 120
           KVEFELVNLVQAVKKSPTFSQFTMDLSIPAKTRVKA +    +R+              V
Sbjct: 61  KVEFELVNLVQAVKKSPTFSQFTMDLSIPAKTRVKALSG---LRV--------------V 120

Query: 121 LAENGRLRYVDSIAKKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKV 180
           LAENGRLRYVDSIAKKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKV
Sbjct: 121 LAENGRLRYVDSIAKKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKV 180

Query: 181 KLEQKIDPNILGGLVVEFGEKVFDMSIKTRALQIK 216
           KLEQKIDPNILGGLVVEFGEKVFDMSIKTRALQIK
Sbjct: 181 KLEQKIDPNILGGLVVEFGEKVFDMSIKTRALQIK 198

[Close]
BLAST of Cucsa.195160 vs. NCBI nr
Match: gi|659123896|ref|XP_008461891.1| (PREDICTED: LOW QUALITY PROTEIN: ATP synthase subunit O, mitochondrial-like [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 2.0e-72
Identity = 149/183 (81.42%), Postives = 163/183 (89.07%), Query Frame = 1 

Query: 33  KVPIALFGGSGNYASALYPAAIKANSLDKVEFELVNLVQAVKKSPTFSQFTMDLSIPAKT 92
           KVPIALFGGSGNYASALY AA+KANSLDKVE ELVNL+QA+KKSPTFSQFTMD+SIP KT
Sbjct: 19  KVPIALFGGSGNYASALYLAAVKANSLDKVESELVNLIQAIKKSPTFSQFTMDMSIPEKT 78

Query: 93  RVKAFTHALQIRILAFKMHHFKESFVFVLAENGRLRYVDSIAKKFLELTMAHRGEVKAIV 152
           RVKA     +I   A K     ++F+ VLAENGRLRY+D IAK+ LELTMAH+GEVKAIV
Sbjct: 79  RVKAIN---EISAEA-KFSDIVKNFLVVLAENGRLRYIDRIAKRILELTMAHKGEVKAIV 138

Query: 153 TTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPNILGGLVVEFGEKVFDMSIKTRAL 212
           TTVIPIPAQEEKELKET+QDIIGQGKKVKLEQKIDPNILGGLVVEFGEKVFDMSIKTRAL
Sbjct: 139 TTVIPIPAQEEKELKETLQDIIGQGKKVKLEQKIDPNILGGLVVEFGEKVFDMSIKTRAL 197

Query: 213 QIK 216
           Q++
Sbjct: 199 QME 197

[Close]
BLAST of Cucsa.195160 vs. NCBI nr
Match: gi|590724678|ref|XP_007052537.1| (ATP synthase subunit O, mitochondrial [Theobroma cacao])

HSP 1 Score: 270.0 bits (689), Expect = 3.5e-69
Identity = 142/214 (66.36%), Postives = 174/214 (81.31%), Query Frame = 1 

Query: 2   AFASRIKSTISVLTKLSRTYTAASGRNEGKVKVPIALFGGSGNYASALYPAAIKANSLDK 61
           A  S +  T+ +  +LS+ Y+ AS + E KVKVP+ALFGGSGNYASALY AA+K N+L+K
Sbjct: 25  AHRSNLHQTL-LCAELSKNYSTASPKKEVKVKVPLALFGGSGNYASALYLAAVKGNALNK 84

Query: 62  VEFELVNLVQAVKKSPTFSQFTMDLSIPAKTRVKAFTHALQIRILAFKMHHFKESFVFVL 121
           VE EL+NLV+A K SPTFSQFT DLS+PA+TRVKA            K     ++F+ VL
Sbjct: 85  VESELLNLVEASKNSPTFSQFTKDLSVPAETRVKAINEICG----QAKFSDVTKNFLVVL 144

Query: 122 AENGRLRYVDSIAKKFLELTMAHRGEVKAIVTTVIPIPAQEEKELKETMQDIIGQGKKVK 181
           AENGRLRY++SIAK+F+ELTMAH+GEVKAIVTTVIP+P +EEKELKET+Q+IIGQGK+VK
Sbjct: 145 AENGRLRYIESIAKRFVELTMAHKGEVKAIVTTVIPLPPEEEKELKETLQEIIGQGKQVK 204

Query: 182 LEQKIDPNILGGLVVEFGEKVFDMSIKTRALQIK 216
           LEQKIDP+ILGGLVVEF +KVFDMSIKTRA Q++
Sbjct: 205 LEQKIDPSILGGLVVEFSQKVFDMSIKTRAQQME 233

[Close]
BLAST of Cucsa.195160 vs. NCBI nr
Match: gi|720074372|ref|XP_010278998.1| (PREDICTED: ATP synthase subunit O, mitochondrial-like [Nelumbo nucifera])

HSP 1 Score: 259.6 bits (662), Expect = 4.8e-66
Identity = 140/235 (59.57%), Postives = 175/235 (74.47%), Query Frame = 1 

Query: 1   MAFASRIKSTISVLTKLSRT--------------------YTAASGRNEGKVKVPIALFG 60
           MA A R++S++S+  ++ R                     Y  AS   E K KVP+A+FG
Sbjct: 1   MALAGRLRSSLSLAQRILRAEPVSAQRAAPSFATSEFLRNYATASQPKESKTKVPLAMFG 60

Query: 61  GSGNYASALYPAAIKANSLDKVEFELVNLVQAVKKSPTFSQFTMDLSIPAKTRVKAFTHA 120
            SGNYASALY +A+KANSLDKVE E+++LV+A KKSPTFSQF  DLS+PA+TRVKA    
Sbjct: 61  VSGNYASALYLSAVKANSLDKVESEILDLVEASKKSPTFSQFIKDLSVPAETRVKAINEI 120

Query: 121 LQIRILAFKMHHFKESFVFVLAENGRLRYVDSIAKKFLELTMAHRGEVKAIVTTVIPIPA 180
                   K+    ++F+ VLAENGRL+++++IAK+F+ELTMAHR EV+AIVTTVIP+P 
Sbjct: 121 CA----EAKVSDITKNFLAVLAENGRLKHIENIAKRFVELTMAHRKEVRAIVTTVIPLPP 180

Query: 181 QEEKELKETMQDIIGQGKKVKLEQKIDPNILGGLVVEFGEKVFDMSIKTRALQIK 216
           QEEKELKET+QDIIGQGK VKLEQKIDP+ILGGLVVEFG+KVFDMSIKTRA Q++
Sbjct: 181 QEEKELKETLQDIIGQGKTVKLEQKIDPSILGGLVVEFGQKVFDMSIKTRARQME 231

[Close]
BLAST of Cucsa.195160 vs. NCBI nr
Match: gi|694377357|ref|XP_009364987.1| (PREDICTED: ATP synthase subunit O, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 259.6 bits (662), Expect = 4.8e-66
Identity = 139/244 (56.97%), Postives = 179/244 (73.36%), Query Frame = 1 

Query: 1   MAFASRIKSTISVLTKL-----------------------------SRTYTAASGRNEGK 60
           MAFASRI+S++ ++TK+                             SR ++ A G+ E K
Sbjct: 1   MAFASRIRSSLPLVTKILKSDSVSAAANGSIAHRSVLCPTFINSEPSRNFSTAQGKKEVK 60

Query: 61  VKVPIALFGGSGNYASALYPAAIKANSLDKVEFELVNLVQAVKKSPTFSQFTMDLSIPAK 120
           VKVP+ LFGGSGNYASALY AA+KAN+L+KVE E+  +V+A+KKSPTFSQFT DLS+PA 
Sbjct: 61  VKVPLVLFGGSGNYASALYIAAVKANALEKVESEIFAIVEAMKKSPTFSQFTRDLSVPAD 120

Query: 121 TRVKAFTHALQIRILAFKMHHFKESFVFVLAENGRLRYVDSIAKKFLELTMAHRGEVKAI 180
           TRVKA            K     ++F+ VLA+NGRLR +++I+K+F ELTMAH+GEVKAI
Sbjct: 121 TRVKAINEITA----EAKFSEITKNFLVVLAQNGRLRNLETISKRFAELTMAHKGEVKAI 180

Query: 181 VTTVIPIPAQEEKELKETMQDIIGQGKKVKLEQKIDPNILGGLVVEFGEKVFDMSIKTRA 216
           VT+VIP+PA+EEKELK+T+Q++IGQGKKV LEQKIDP+ILGGLV+EF +KVFDMSIKTRA
Sbjct: 181 VTSVIPLPAEEEKELKDTLQELIGQGKKVILEQKIDPSILGGLVIEFDKKVFDMSIKTRA 240

The following BLAST results are available for this feature:
BLAST of Cucsa.195160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATPO_IPOBA3.2e-6260.70ATP synthase subunit O, mitochondrial OS=Ipomoea batatas PE=1 SV=1[more]
ATPO_ARATH3.6e-5354.31ATP synthase subunit O, mitochondrial OS=Arabidopsis thaliana GN=At5g13450 PE=1 ... [more]
ATPO_SORAR2.4e-2534.83ATP synthase subunit O, mitochondrial OS=Sorex araneus GN=ATP5O PE=3 SV=1[more]
ATPO_PONAB3.1e-2534.33ATP synthase subunit O, mitochondrial OS=Pongo abelii GN=ATP5O PE=2 SV=1[more]
ATPO_PIG4.1e-2534.33ATP synthase subunit O, mitochondrial OS=Sus scrofa GN=ATP5O PE=1 SV=1[more]
BLAST of Cucsa.195160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCE2_CUCSA1.7e-9489.77Uncharacterized protein OS=Cucumis sativus GN=Csa_3G696890 PE=3 SV=1[more]
A0A061DVA9_THECC2.5e-6966.36ATP synthase subunit O, mitochondrial OS=Theobroma cacao GN=TCM_005886 PE=3 SV=1[more]
M5XET6_PRUPE6.3e-6556.79Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010026mg PE=3 SV=1[more]
A0A103Y1F0_CYNCS1.4e-6465.66Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021069 PE=3 ... [more]
A0A0A0KBG4_CUCSA4.1e-6465.17Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428190 PE=3 SV=1[more]
BLAST of Cucsa.195160 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G13450.12.0e-5454.31 delta subunit of Mt ATP synthase[more]
BLAST of Cucsa.195160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203461|gb|KGN58594.1|2.4e-9489.77hypothetical protein Csa_3G696890 [Cucumis sativus][more]
gi|659123896|ref|XP_008461891.1|2.0e-7281.42PREDICTED: LOW QUALITY PROTEIN: ATP synthase subunit O, mitochondrial-like [Cucu... [more]
gi|590724678|ref|XP_007052537.1|3.5e-6966.36ATP synthase subunit O, mitochondrial [Theobroma cacao][more]
gi|720074372|ref|XP_010278998.1|4.8e-6659.57PREDICTED: ATP synthase subunit O, mitochondrial-like [Nelumbo nucifera][more]
gi|694377357|ref|XP_009364987.1|4.8e-6656.97PREDICTED: ATP synthase subunit O, mitochondrial-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000711ATPase_OSCP/dsu
IPR020781ATPase_OSCP/d_CS
IPR026015ATP_synth_OSCP/delta_N_sf
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0009507 chloroplast
cellular_component GO:0005753 mitochondrial proton-transporting ATP synthase complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
cellular_component GO:0045259 proton-transporting ATP synthase complex
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.195160.1Cucsa.195160.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000711ATPase, OSCP/delta subunitPRINTSPR00125ATPASEDELTAcoord: 41..60
score: 6.6E-25coord: 178..193
score: 6.6E-25coord: 126..140
score: 6.6E-25coord: 193..211
score: 6.6E-25coord: 115..126
score: 6.6
IPR000711ATPase, OSCP/delta subunitHAMAPMF_01416ATP_synth_delta_bactcoord: 37..215
score: 13
IPR000711ATPase, OSCP/delta subunitPANTHERPTHR11910ATP SYNTHASE DELTA CHAINcoord: 19..215
score: 3.0
IPR000711ATPase, OSCP/delta subunitPFAMPF00213OSCPcoord: 43..214
score: 9.8
IPR000711ATPase, OSCP/delta subunitTIGRFAMsTIGR01145TIGR01145coord: 44..210
score: 5.4
IPR020781ATPase, OSCP/delta subunit, conserved sitePROSITEPS00389ATPASE_DELTAcoord: 180..199
scor
IPR026015F1F0 ATP synthase OSCP/delta subunit, N-terminal domainGENE3DG3DSA:1.10.520.20coord: 38..147
score: 1.0
IPR026015F1F0 ATP synthase OSCP/delta subunit, N-terminal domainunknownSSF47928N-terminal domain of the delta subunit of the F1F0-ATP synthasecoord: 42..147
score: 3.14
NoneNo IPR availablePANTHERPTHR11910:SF1ATP SYNTHASE SUBUNIT O, MITOCHONDRIALcoord: 19..215
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.195160Cla017266Watermelon (97103) v1cgywmB376
Cucsa.195160Csa3G696890Cucumber (Chinese Long) v2cgycuB297
Cucsa.195160MELO3C023548Melon (DHL92) v3.5.1cgymeB353
Cucsa.195160ClCG10G012410Watermelon (Charleston Gray)cgywcgB354
Cucsa.195160CSPI07G19280Wild cucumber (PI 183967)cgycpiB307
Cucsa.195160CSPI03G29710Wild cucumber (PI 183967)cgycpiB306
Cucsa.195160CmaCh01G002230Cucurbita maxima (Rimu)cgycmaB0569
Cucsa.195160CmaCh17G009520Cucurbita maxima (Rimu)cgycmaB0568
Cucsa.195160CmoCh17G009270Cucurbita moschata (Rifu)cgycmoB0570
Cucsa.195160CmoCh14G010220Cucurbita moschata (Rifu)cgycmoB0569
Cucsa.195160CmoCh01G002340Cucurbita moschata (Rifu)cgycmoB0571
Cucsa.195160Lsi02G025780Bottle gourd (USVL1VR-Ls)cgylsiB330
Cucsa.195160Cp4.1LG02g15670Cucurbita pepo (Zucchini)cgycpeB0549
Cucsa.195160Cp4.1LG12g06780Cucurbita pepo (Zucchini)cgycpeB0548
Cucsa.195160Cp4.1LG03g04520Cucurbita pepo (Zucchini)cgycpeB0550
Cucsa.195160MELO3C023548.2Melon (DHL92) v3.6.1cgymedB348
Cucsa.195160MELO3C030924.2Melon (DHL92) v3.6.1cgymedB349
Cucsa.195160CsaV3_3G032180Cucumber (Chinese Long) v3cgycucB310
Cucsa.195160CsaV3_7G031080Cucumber (Chinese Long) v3cgycucB311
Cucsa.195160Cla97C10G195210Watermelon (97103) v2cgywmbB359
Cucsa.195160Bhi09G000528Wax gourdcgywgoB402
Cucsa.195160Bhi11G001184Wax gourdcgywgoB401
Cucsa.195160Carg07321Silver-seed gourdcarcgyB0862
Cucsa.195160Carg11223Silver-seed gourdcarcgyB0931
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.195160Cucurbita maxima (Rimu)cgycmaB0567
Cucsa.195160Melon (DHL92) v3.5.1cgymeB354
Cucsa.195160Bottle gourd (USVL1VR-Ls)cgylsiB331