Cucsa.195000 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.195000
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	60S ribosomal protein L6
Location	scaffold01349 : 1918 .. 4481 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTAGAATTCTTTCGGCAAGCAGAGAAGAAACGAGGCAGCCAAATTCTCAGAAACTCATCAATGGCGCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCACAAGCGAGGTCTCTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCACGATGCCAAGCCTAAGGCCGAAGCTCCAGCTGAAAAGCCGCCGAAATTTTACCCTGCCGACGATGTTAAGAAACCCATTGTCAACAAACGTAAAGCTAAGCCCACCAAACTTAGGTAGATATTTCGCAATGTTCTTTCTTTACATCTGATATATAGTTCCCTGTTTTCGAACCTATATTGTATGCTATGGTTGGGAAATTGGGGAATTGGTGTTAACTGTGGAATGAATTAAGTAAAATGTCTTGTGTATTTGTGTTTTCTTTTTCTGGGTAAGGATTATTTTTTTtATTAATCGAGGAAAATTTGAGTTCATGCTGTAGCTGCGAATAAAGGGGGAATTTTTACACATAGGTGACTGCCATAATAGATGGATTTATTTCACACTTGATTTGAGTTTTCGGTTTTAAATTGCGTGAAGTGAATTAATGTTGCTCATTTTCCAAATAATAAACATTTGGTCCATTTCGATTAATTATTCTGCTTGCAGGTCTAGTATTACTCCTGGAACTGTGCTTATCATTCTTACTGGAAGATTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTGACTGGTGAGTTTTCAGCATTCCCTGTAATTGCCTGTCTTCATAATTTTTTATGTAGTAGCACATCGTGTTGGGGTTTGGGAGGTTTTATTATTTATACATGGGGATTAGGTTTTCTCTTCTTTACATTCATTGTGTACTTTGGATTAGATTTGCATTTGGCAGTGTCATTTTTTATGGCTTAGCGTCTTAGCAATTGTTGGCTTAAGCTTTACAAACTGATATTATCTTAATGTGTTGCCGGCATAGTGTTTACCATTGAGAAATTAGAAGTAGGATTCCTTGGGATTTAGATTTTGGTAGTATTAATAGCTTAACCTCGGAACCAATTAATATTGAAATGTCTCGTGCCTTGCATTCTGATTTCTGCCCATATCCCTTGCAATGGTCTTTACATACTACTGAAAATTTTCATGCCTCCAATTTGGCCCCAGAGACGAACATCAACGTTATAATGGGTGATTTCCTATTGCGTCTGGTCTTTTGTGAGAAAGGTTGCTTCTTGTGGTTGGCGAGGGTGTGTACTCTCATATGGAATCTTTGTGGGTAAAAAAaCAATCTAGTGTTTGGTGGGCTGGATAAGGAGTCTAGTGATGTTTGGGCCCTTTTTAGGTTTTCCCTTTAGACTTCAAATTTGATTTATTTGTTTATCTACTATATGCACTATTTTGATCAATTGGGCCTTGTTTCTTTAATGAGTCTTTTGTGCTTGATTTTTTtGTTTTtCCTTGTATGCTTTCATTTTTTCCCTCAATTGGGCCTTGTTTTTTAATGAGCCTTGTTTCCTCAATTGAGCCTTAAGTGGTTTCTTGATCAAAGACATGTCTTAATTTCCTAAGCTTCATGTGCAATATCTGGGAGGGATTGGCTTGATGATGCGGATTGTATTGTATGTTTGGGAGAAGGGTTGCATATAAACTAATGATTAGATGTGGTCTGGGATTTTAGATCCGAAATTCTTGAACCTGCCGACTATCTGAATTTAACGGTTGTCATTTTAGGTCCATTCAAAGTCAATGGCGTTCCTTTAAGACGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTACAGGGGTCAGCGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTCAAAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGTTCATAGTTTTTtCATTTTTTTtCCACTGTTCAAATATTTCAAATTTTATCATTTCTTTACCCTAATTTTTGGTCTCCGTTGTTGCAATATAGGAAAAAAGTGCACTTCCACAGGACAAAAAAGATGACCAGAAGGCAGTGGACTCAGCTCTGCTGAAGTCCATCGAGGCAGTCTCAGACTTAAAGACATACTTAGCTGCAAGGTTTTCTCTGAAGGCAGGCATGAAACCACATGAACTTGTTTTCTAAATATTTCTCTCTTGGGTGCTGAAACTTCTCGTGGAAGTTGATCCCTACAATCTTCTTGTTCATGTTTTGTTACAAGGATTCTAGATTTGATGTTATGTGTCTTGACGAATTTTGCAGTGAACTTTTATTCATCAATTTTTGCGTTATGTAGCTTCCTTTGACTACTGATAGTGATAAGATATGTACTTTTTTTtCAATTGTATCATTGTTTTCTAGTTGATGAAATACTTGAGAGAATCATTTGGAAAGAAGCCATGGTGGATAGCCAAATTGAGTTGGGCCATTTCTTCAATTGTATGCTTGAGTCTAAAAAGTATTCGTGGTTTCTTTTTCCATTTGGTAAA

mRNA sequence

CCCTAGAATTCTTTCGGCAAGCAGAGAAGAAACGAGGCAGCCAAATTCTCAGAAACTCATCAATGGCGCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCACAAGCGAGGTCTCTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCACGATGCCAAGCCTAAGGCCGAAGCTCCAGCTGAAAAGCCGCCGAAATTTTACCCTGCCGACGATGTTAAGAAACCCATTGTCAACAAACGTAAAGCTAAGCCCACCAAACTTAGGTCTAGTATTACTCCTGGAACTGTGCTTATCATTCTTACTGGAAGATTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTGACTGGTCCATTCAAAGTCAATGGCGTTCCTTTAAGACGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTACAGGGGTCAGCGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTCAAAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGAAAAAAGTGCACTTCCACAGGACAAAAAAGATGACCAGAAGGCAGTGGACTCAGCTCTGCTGAAGTCCATCGAGGCAGTCTCAGACTTAAAGACATACTTAGCTGCAAGGTTTTCTCTGAAGGCAGGCATGAAACCACATGAACTTGTTTTCTAAATATTTCTCTCTTGGGTGCTGAAACTTCTCGTGGAAGTTGATCCCTACAATCTTCTTGTTCATGTTTTGTTACAAGGATTCTAGATTTGATGTTATGTGTCTTGACGAATTTTGCAGTGAACTTTTATTCATCAATTTTTGCGTTATGTAGCTTCCTTTGACTACTGATAGTGATAAGATATGTACTTTTTTTTCAATTGTATCATTGTTTTCTAGTTGATGAAATACTTGAGAGAATCATTTGGAAAGAAGCCATGGTGGATAGCCAAATTGAGTTGGGCCATTTCTTCAATTGTATGCTTGAGTCTAAAAAGTATTCGTGGTTTCTTTTTCCATTTGGTAAA

Coding sequence (CDS)

ATGGCGCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCCAAGATGTACCACAAGCGAGGTCTCTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCACGATGCCAAGCCTAAGGCCGAAGCTCCAGCTGAAAAGCCGCCGAAATTTTACCCTGCCGACGATGTTAAGAAACCCATTGTCAACAAACGTAAAGCTAAGCCCACCAAACTTAGGTCTAGTATTACTCCTGGAACTGTGCTTATCATTCTTACTGGAAGATTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTGACTGGTCCATTCAAAGTCAATGGCGTTCCTTTAAGACGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTACAGGGGTCAGCGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTCAAAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGAAAAAAGTGCACTTCCACAGGACAAAAAAGATGACCAGAAGGCAGTGGACTCAGCTCTGCTGAAGTCCATCGAGGCAGTCTCAGACTTAAAGACATACTTAGCTGCAAGGTTTTCTCTGAAGGCAGGCATGAAACCACATGAACTTGTTTTCTAA

Protein sequence

MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPPKFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF*

Homology

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BLAST of Cucsa.195000 vs. Swiss-Prot
Match: RL62_ARATH (60S ribosomal protein L6-2 OS=Arabidopsis thaliana GN=RPL6B PE=2 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 7.9e-107
Identity = 188/228 (82.46%), Postives = 209/228 (91.67%), Query Frame = 1


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPPKFY 63
           +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K +AP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKP+ N+R AKP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV+++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

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BLAST of Cucsa.195000 vs. Swiss-Prot
Match: RL63_ARATH (60S ribosomal protein L6-3 OS=Arabidopsis thaliana GN=RPL6C PE=2 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.3e-106
Identity = 188/228 (82.46%), Postives = 209/228 (91.67%), Query Frame = 1


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPPKFY 63
           +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K +AP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKP+ N+R AKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV+++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

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BLAST of Cucsa.195000 vs. Swiss-Prot
Match: RL61_ARATH (60S ribosomal protein L6-1 OS=Arabidopsis thaliana GN=RPL6A PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 6.7e-106
Identity = 185/230 (80.43%), Postives = 208/230 (90.43%), Query Frame = 1


Query: 2   APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPPK 61
           A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK +AP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKP+VN+RK KPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GV+ EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           K  +PQ+KK+DQK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

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BLAST of Cucsa.195000 vs. Swiss-Prot
Match: RL6_MESCR (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 6.2e-104
Identity = 185/224 (82.59%), Postives = 202/224 (90.18%), Query Frame = 1


Query: 8   VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPPKFYPADD 67
           VSRNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADD
Sbjct: 11  VSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADD 70

Query: 68  VKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 127
           VKKP++NKRK KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFKVNGV
Sbjct: 71  VKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGV 130

Query: 128 PLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQ 187
           PLRRVNQ+YVIATSTKVDI+GV+VEKFDDKYF K+ +KK KKGEGEFFEAEK+E + LPQ
Sbjct: 131 PLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQ 190

Query: 188 DKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           +KKDDQKAVD ALLK+IE V +LK YL ARFSLKAGMKPHELVF
Sbjct: 191 EKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

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BLAST of Cucsa.195000 vs. Swiss-Prot
Match: RL6_MOUSE (60S ribosomal protein L6 OS=Mus musculus GN=Rpl6 PE=1 SV=3)

HSP 1 Score: 204.1 bits (518), Expect = 1.6e-51
Identity = 124/257 (48.25%), Postives = 160/257 (62.26%), Query Frame = 1


Query: 3   PKTAR--VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAE------- 62
           PK A+   SRNP L+RG+G+YSRS MY ++ L+  K K      + + K K E       
Sbjct: 44  PKKAKPHCSRNPVLVRGIGRYSRSAMYSRKALY--KRKYSAAKTKVEKKKKKEKVLATVT 103

Query: 63  -------------APAEKPPKFYPADDVKKPIVNKRKAKP-----TKLRSSITPGTVLII 122
                            K P++YP +DV + +++  K KP      +LRSSITPGTVLII
Sbjct: 104 KTVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLII 163

Query: 123 LTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDITGVSVEK-F 182
           LTGR +GKRVVFLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTKVDI+ V + K  
Sbjct: 164 LTGRHRGKRVVFLKQLDSGLLLVTGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHL 223

Query: 183 DDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYL 232
            D YF K+  +K +  EGE F+ EK EK  + + +K DQKAVD  +L  I+AV  L+ YL
Sbjct: 224 TDAYFKKKQLRKPRHQEGEIFDTEK-EKYEITEQRKADQKAVDLQILPKIKAVPQLQGYL 283

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BLAST of Cucsa.195000 vs. TrEMBL
Match: A0A0A0L9J7_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus GN=Csa_3G698560 PE=3 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 9.0e-126
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Cucsa.195000 vs. TrEMBL
Match: A0A0A0KYA4_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus GN=Csa_4G153800 PE=3 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 1.5e-120
Identity = 220/231 (95.24%), Postives = 227/231 (98.27%), Query Frame = 1


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA++PAEKPP
Sbjct: 54  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 113

Query: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 114 KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 173

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 174 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 233

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ+KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 234 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 284

[Close]

BLAST of Cucsa.195000 vs. TrEMBL
Match: A0A0A0K9V0_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus GN=Csa_7G428940 PE=3 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 7.2e-115
Identity = 209/231 (90.48%), Postives = 220/231 (95.24%), Query Frame = 1


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60
           MAPKT RV+RNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA APAEKPP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60

Query: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRKAK TKLR+SITPGTVLIIL GRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFK+NGVPLRRVNQSYVIATSTKVDI+GV+ EKFDDKYFSKE QKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALP +KKDDQKAVD+ L+KSIEAV +LK YL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

[Close]

BLAST of Cucsa.195000 vs. TrEMBL
Match: F6HB97_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g01390 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-110
Identity = 201/233 (86.27%), Postives = 219/233 (93.99%), Query Frame = 1


Query: 1   MAPK--TARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEK 60
           MAPK  T +VSRNP+LIRG+GK+SRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA APAEK
Sbjct: 1   MAPKQRTPKVSRNPNLIRGIGKHSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAPAPAEK 60

Query: 61  PPKFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLV 120
            PKFYPADDVKKP+VN+ K+K TKLR+SITPGTVLIIL GRFKGKRVVFLKQLPSGLLLV
Sbjct: 61  SPKFYPADDVKKPLVNRHKSKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLV 120

Query: 121 TGPFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAE 180
           TGPFK+NGVPLRRVNQ+Y+IATSTKVDI+GV+VEKFDDKYF+KE QKKKKKGEGEFFEA+
Sbjct: 121 TGPFKINGVPLRRVNQAYIIATSTKVDISGVNVEKFDDKYFAKETQKKKKKGEGEFFEAD 180

Query: 181 KEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           KEEKS LPQ+KKDDQKAVD+ L+KSIE V DLKTYL ARFSLKAGMKPHELVF
Sbjct: 181 KEEKSVLPQEKKDDQKAVDTPLIKSIEGVPDLKTYLGARFSLKAGMKPHELVF 233

[Close]

BLAST of Cucsa.195000 vs. TrEMBL
Match: A0A067JCI0_JATCU (60S ribosomal protein L6 OS=Jatropha curcas GN=JCGZ_21983 PE=3 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 6.9e-110
Identity = 194/231 (83.98%), Postives = 215/231 (93.07%), Query Frame = 1


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60
           MAP+T RVSRNPDL+RG+GK+SRS+MYHKRGLWAIKAKNGGVFP+HD KPK  AP EKPP
Sbjct: 1   MAPRTVRVSRNPDLVRGIGKFSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPSAPTEKPP 60

Query: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADD KKP++NKRK KPTKLRSSITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTG
Sbjct: 61  KFYPADDAKKPLLNKRKPKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFK+NGVPLRRVNQSYVIATS+KVDI+GV+V+KFDDKYF+K+ +KK KKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSSKVDISGVNVDKFDDKYFAKQFEKKNKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EK+ LP++KKDDQK VD+AL+KSIE V DLK YLAARFSLKAGMKPHELVF
Sbjct: 181 EKNVLPEEKKDDQKTVDAALIKSIEGVPDLKAYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Cucsa.195000 vs. TAIR10
Match: AT1G74060.1 (AT1G74060.1 Ribosomal protein L6 family protein)

HSP 1 Score: 387.9 bits (995), Expect = 4.4e-108
Identity = 188/228 (82.46%), Postives = 209/228 (91.67%), Query Frame = 1


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPPKFY 63
           +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K +AP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKP+ N+R AKP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV+++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Cucsa.195000 vs. TAIR10
Match: AT1G74050.1 (AT1G74050.1 Ribosomal protein L6 family protein)

HSP 1 Score: 387.1 bits (993), Expect = 7.6e-108
Identity = 188/228 (82.46%), Postives = 209/228 (91.67%), Query Frame = 1


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPPKFY 63
           +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K +AP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKP+ N+R AKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV+++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Cucsa.195000 vs. TAIR10
Match: AT1G18540.1 (AT1G18540.1 Ribosomal protein L6 family protein)

HSP 1 Score: 384.8 bits (987), Expect = 3.8e-107
Identity = 185/230 (80.43%), Postives = 208/230 (90.43%), Query Frame = 1


Query: 2   APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPPK 61
           A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK +AP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKP+VN+RK KPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GV+ EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           K  +PQ+KK+DQK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of Cucsa.195000 vs. NCBI nr
Match: gi|449463779|ref|XP_004149609.1| (PREDICTED: 60S ribosomal protein L6-2-like [Cucumis sativus])

HSP 1 Score: 457.6 bits (1176), Expect = 1.3e-125
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Cucsa.195000 vs. NCBI nr
Match: gi|659123670|ref|XP_008461779.1| (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo])

HSP 1 Score: 451.1 bits (1159), Expect = 1.2e-123
Identity = 226/231 (97.84%), Postives = 229/231 (99.13%), Query Frame = 1


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK EAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRKAKPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDITGV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQK VDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Cucsa.195000 vs. NCBI nr
Match: gi|700198671|gb|KGN53829.1| (hypothetical protein Csa_4G153800 [Cucumis sativus])

HSP 1 Score: 440.3 bits (1131), Expect = 2.1e-120
Identity = 220/231 (95.24%), Postives = 227/231 (98.27%), Query Frame = 1


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA++PAEKPP
Sbjct: 54  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 113

Query: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 114 KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 173

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 174 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 233

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ+KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 234 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 284

[Close]

BLAST of Cucsa.195000 vs. NCBI nr
Match: gi|778692213|ref|XP_004150161.2| (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis sativus])

HSP 1 Score: 440.3 bits (1131), Expect = 2.1e-120
Identity = 220/231 (95.24%), Postives = 227/231 (98.27%), Query Frame = 1


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA++PAEKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60

Query: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ+KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Cucsa.195000 vs. NCBI nr
Match: gi|659121739|ref|XP_008460790.1| (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo])

HSP 1 Score: 438.0 bits (1125), Expect = 1.1e-119
Identity = 220/231 (95.24%), Postives = 226/231 (97.84%), Query Frame = 1


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKA++PAEKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPP 60

Query: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPA DVKKP+VNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQVKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

The following BLAST results are available for this feature:

BLAST of Cucsa.195000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL62_ARATH	7.9e-107	82.46	60S ribosomal protein L6-2 OS=Arabidopsis thaliana GN=RPL6B PE=2 SV=1	[more]
RL63_ARATH	1.3e-106	82.46	60S ribosomal protein L6-3 OS=Arabidopsis thaliana GN=RPL6C PE=2 SV=1	[more]
RL61_ARATH	6.7e-106	80.43	60S ribosomal protein L6-1 OS=Arabidopsis thaliana GN=RPL6A PE=2 SV=1	[more]
RL6_MESCR	6.2e-104	82.59	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1	[more]
RL6_MOUSE	1.6e-51	48.25	60S ribosomal protein L6 OS=Mus musculus GN=Rpl6 PE=1 SV=3	[more]

BLAST of Cucsa.195000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9J7_CUCSA	9.0e-126	100.00	60S ribosomal protein L6 OS=Cucumis sativus GN=Csa_3G698560 PE=3 SV=1	[more]
A0A0A0KYA4_CUCSA	1.5e-120	95.24	60S ribosomal protein L6 OS=Cucumis sativus GN=Csa_4G153800 PE=3 SV=1	[more]
A0A0A0K9V0_CUCSA	7.2e-115	90.48	60S ribosomal protein L6 OS=Cucumis sativus GN=Csa_7G428940 PE=3 SV=1	[more]
F6HB97_VITVI	1.1e-110	86.27	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g01390 PE=4 SV=...	[more]
A0A067JCI0_JATCU	6.9e-110	83.98	60S ribosomal protein L6 OS=Jatropha curcas GN=JCGZ_21983 PE=3 SV=1	[more]

BLAST of Cucsa.195000 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G74060.1	4.4e-108	82.46	Ribosomal protein L6 family protein	[more]
AT1G74050.1	7.6e-108	82.46	Ribosomal protein L6 family protein	[more]
AT1G18540.1	3.8e-107	80.43	Ribosomal protein L6 family protein	[more]

BLAST of Cucsa.195000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463779\|ref\|XP_004149609.1\|	1.3e-125	100.00	PREDICTED: 60S ribosomal protein L6-2-like [Cucumis sativus]	[more]
gi\|659123670\|ref\|XP_008461779.1\|	1.2e-123	97.84	PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo]	[more]
gi\|700198671\|gb\|KGN53829.1\|	2.1e-120	95.24	hypothetical protein Csa_4G153800 [Cucumis sativus]	[more]
gi\|778692213\|ref\|XP_004150161.2\|	2.1e-120	95.24	PREDICTED: 60S ribosomal protein L6-1-like [Cucumis sativus]	[more]
gi\|659121739\|ref\|XP_008460790.1\|	1.1e-119	95.24	PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000915	60S_ribosomal_L6E
IPR005568	Ribosomal_L6_N
IPR008991	Translation_prot_SH3-like_sf
IPR014722	Rib_L2_dom2

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.195000.1	Cucsa.195000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 1..231 score: 4.0E
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 124..231 score: 4.4
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 125..143 scor
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 7..59 score: 1.3
IPR008991	Translation protein SH3-like domain	unknown	SSF50104	Translation proteins SH3-like domain	coord: 84..175 score: 2.89
IPR014722	Ribosomal protein L2 domain 2	GENE3D	G3DSA:2.30.30.30		coord: 84..171 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.195000	Cla017246	Watermelon (97103) v1	cgywmB376
Cucsa.195000	Csa3G698560	Cucumber (Chinese Long) v2	cgycuB297
Cucsa.195000	MELO3C023953	Melon (DHL92) v3.5.1	cgymeB354
Cucsa.195000	MELO3C023525	Melon (DHL92) v3.5.1	cgymeB353
Cucsa.195000	ClCG10G012570	Watermelon (Charleston Gray)	cgywcgB354
Cucsa.195000	CSPI03G29880	Wild cucumber (PI 183967)	cgycpiB306
Cucsa.195000	CSPI07G19510	Wild cucumber (PI 183967)	cgycpiB307
Cucsa.195000	CmaCh17G009380	Cucurbita maxima (Rimu)	cgycmaB0568
Cucsa.195000	CmaCh14G010220	Cucurbita maxima (Rimu)	cgycmaB0567
Cucsa.195000	CmaCh01G002110	Cucurbita maxima (Rimu)	cgycmaB0569
Cucsa.195000	CmoCh14G010400	Cucurbita moschata (Rifu)	cgycmoB0569
Cucsa.195000	CmoCh01G002230	Cucurbita moschata (Rifu)	cgycmoB0571
Cucsa.195000	CmoCh17G009130	Cucurbita moschata (Rifu)	cgycmoB0570
Cucsa.195000	Lsi03G012260	Bottle gourd (USVL1VR-Ls)	cgylsiB331
Cucsa.195000	Lsi02G026000	Bottle gourd (USVL1VR-Ls)	cgylsiB330
Cucsa.195000	Cp4.1LG12g06990	Cucurbita pepo (Zucchini)	cgycpeB0548
Cucsa.195000	Cp4.1LG02g15500	Cucurbita pepo (Zucchini)	cgycpeB0549
Cucsa.195000	Cp4.1LG03g09100	Cucurbita pepo (Zucchini)	cgycpeB0550
Cucsa.195000	MELO3C023525.2	Melon (DHL92) v3.6.1	cgymedB348
Cucsa.195000	MELO3C023953.2	Melon (DHL92) v3.6.1	cgymedB349
Cucsa.195000	CsaV3_3G032360	Cucumber (Chinese Long) v3	cgycucB310
Cucsa.195000	CsaV3_7G031330	Cucumber (Chinese Long) v3	cgycucB311
Cucsa.195000	Cla97C10G195400	Watermelon (97103) v2	cgywmbB359
Cucsa.195000	Bhi09G000502	Wax gourd	cgywgoB402
Cucsa.195000	Carg07309	Silver-seed gourd	carcgyB0862
Cucsa.195000	Carg11237	Silver-seed gourd	carcgyB0931

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None