Cucsa.194340 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GATCAATCTTCCAAAACGCACGAGTAACAGTCAACATAACAAATACGCTAAAAGGTATAAATAATAAACTCACTATTCACAGAAGATCTGACGATGATGACTTGGGAGTCCACCAATTACCGCACTTGGCTAGTTATGCCTTCTCTTTTCAACCAAACTTTTGGGGCACAACCTTGTTCTATTGTTCCTATGAGTGGCTTGGTTTTTCTCATCGATTCGATACCTATAAGGATGGGAGAGATAGAGTTTATTGCAATAGAACTCTGTGTTTGTGGATTGTGTCGGAAGAAGGCATCTGTATGTTCAACTATAAAAAAAAaGCATATGATATTTGCTATAGGTGGTTGGCTAAATGA GATCAATCTTCCAAAACGCACGAGTAACAGTCAACATAACAAATACGCTAAAAGGTATAAATAATAAACTCACTATTCACAGAAGATCTGACGATGATGACTTGGGAGTCCACCAATTACCGCACTTGGCTAGTTATGCCTTCTCTTTTCAACCAAACTTTTGGGGCACAACCTTGTTCTATTGTTCCTATGAGTGGCTTGGTTTTTCTCATCGATTCGATACCTATAAGGATGGGAGAGATAGAGTTTATTGCAATAGAACTCTGTGTTTGTGGATTGTGTCGGAAGAAGGCATCTGTATGTTCAACTATAAAAAAAAAGCATATGATATTTGCTATAGGTGGTTGGCTAAATGA GATCAATCTTCCAAAACGCACGAGTAACAGTCAACATAACAAATACGCTAAAAGGTATAAATAATAAACTCACTATTCACAGAAGATCTGACGATGATGACTTGGGAGTCCACCAATTACCGCACTTGGCTAGTTATGCCTTCTCTTTTCAACCAAACTTTTGGGGCACAACCTTGTTCTATTGTTCCTATGAGTGGCTTGGTTTTTCTCATCGATTCGATACCTATAAGGATGGGAGAGATAGAGTTTATTGCAATAGAACTCTGTGTTTGTGGATTGTGTCGGAAGAAGGCATCTGTATGTTCAACTATAAAAAAAAaGCATATGATATTTGCTATAGGTGGTTGGCTAAATGA SIFQNARVTVNITNTLKGINNKLTIHRRSDDDDLGVHQLPHLASYAFSFQPNFWGTTLFYCSYEWLGFSHRFDTYKDGRDRVYCNRTLCLWIVSEEGICMFNYKKKAYDICYRWLAK*
BLAST of Cucsa.194340 vs. TrEMBL
Match: A0A0A0LI28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G162130 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 6.3e-43 Identity = 78/112 (69.64%), Postives = 93/112 (83.04%), Query Frame = 1
BLAST of Cucsa.194340 vs. TrEMBL
Match: M5XR83_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018418mg PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.5e-23 Identity = 55/105 (52.38%), Postives = 68/105 (64.76%), Query Frame = 1
BLAST of Cucsa.194340 vs. TrEMBL
Match: A0A067LIJ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16268 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 4.0e-21 Identity = 52/106 (49.06%), Postives = 62/106 (58.49%), Query Frame = 1
BLAST of Cucsa.194340 vs. TrEMBL
Match: M5XJY5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019850mg PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 8.9e-21 Identity = 51/106 (48.11%), Postives = 70/106 (66.04%), Query Frame = 1
BLAST of Cucsa.194340 vs. TrEMBL
Match: A0A059B0M4_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_H01885 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.4e-20 Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 1
BLAST of Cucsa.194340 vs. TAIR10
Match: AT4G16195.1 (AT4G16195.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 95.5 bits (236), Expect = 2.3e-20 Identity = 50/119 (42.02%), Postives = 67/119 (56.30%), Query Frame = 1
BLAST of Cucsa.194340 vs. TAIR10
Match: AT5G12060.1 (AT5G12060.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 91.7 bits (226), Expect = 3.3e-19 Identity = 48/107 (44.86%), Postives = 64/107 (59.81%), Query Frame = 1
BLAST of Cucsa.194340 vs. TAIR10
Match: AT1G04645.1 (AT1G04645.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 82.8 bits (203), Expect = 1.6e-16 Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = 1
BLAST of Cucsa.194340 vs. TAIR10
Match: AT3G17080.1 (AT3G17080.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 80.9 bits (198), Expect = 5.9e-16 Identity = 45/118 (38.14%), Postives = 60/118 (50.85%), Query Frame = 1
BLAST of Cucsa.194340 vs. TAIR10
Match: AT5G12070.1 (AT5G12070.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 76.6 bits (187), Expect = 1.1e-14 Identity = 43/108 (39.81%), Postives = 61/108 (56.48%), Query Frame = 1
BLAST of Cucsa.194340 vs. NCBI nr
Match: gi|778674141|ref|XP_011650142.1| (PREDICTED: uncharacterized protein LOC105434730 [Cucumis sativus]) HSP 1 Score: 257.7 bits (657), Expect = 1.0e-65 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1
BLAST of Cucsa.194340 vs. NCBI nr
Match: gi|659121604|ref|XP_008460742.1| (PREDICTED: uncharacterized protein LOC103499505 [Cucumis melo]) HSP 1 Score: 199.5 bits (506), Expect = 3.2e-48 Identity = 88/105 (83.81%), Postives = 94/105 (89.52%), Query Frame = 1
BLAST of Cucsa.194340 vs. NCBI nr
Match: gi|659121602|ref|XP_008460741.1| (PREDICTED: uncharacterized protein LOC103499504 [Cucumis melo]) HSP 1 Score: 195.3 bits (495), Expect = 6.1e-47 Identity = 85/113 (75.22%), Postives = 97/113 (85.84%), Query Frame = 1
BLAST of Cucsa.194340 vs. NCBI nr
Match: gi|659121606|ref|XP_008460743.1| (PREDICTED: uncharacterized protein LOC103499506 [Cucumis melo]) HSP 1 Score: 182.2 bits (461), Expect = 5.3e-43 Identity = 80/112 (71.43%), Postives = 91/112 (81.25%), Query Frame = 1
BLAST of Cucsa.194340 vs. NCBI nr
Match: gi|700206411|gb|KGN61530.1| (hypothetical protein Csa_2G162130 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 9.1e-43 Identity = 78/112 (69.64%), Postives = 93/112 (83.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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