Cucsa.194270 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.194270
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Self-incompatibility S1 family protein
Location	scaffold01337 : 610323 .. 610690 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCATCATACAACCAGATAGGTTATACCTACACGGGGTCGTTTTCGAGGTTCGTGTCATCAACGGCTTCAAAAACAACTCATCTTTGCCTTTAGTGATATGGTGCTCCTCAAAAGAGAATGATTTAGGAGGAAGGGCTTTGCAAGAACATGATGATTTCAGCTGGAAAGTAACAACAAAACTTTGGAAGAGCAACCAATTCTCTTGTACCATGAAATGGGATGCCAAAAGGAGATCCTTTGATGCGTTTAAGGTTCCTAGGGATTTTTATCGATGTGGGCATTTCAAGAAATGTTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCTCTGATGAGATTAACTGGAAGAAAGATTTTCAATG

mRNA sequence

ATGTTCATCATACAACCAGATAGGTTATACCTACACGGGGTCGTTTTCGAGGTTCGTGTCATCAACGGCTTCAAAAACAACTCATCTTTGCCTTTAGTGATATGGTGCTCCTCAAAAGAGAATGATTTAGGAGGAAGGGCTTTGCAAGAACATGATGATTTCAGCTGGAAAGTAACAACAAAACTTTGGAAGAGCAACCAATTCTCTTGTACCATGAAATGGGATGCCAAAAGGAGATCCTTTGATGCGTTTAAGGTTCCTAGGGATTTTTATCGATGTGGGCATTTCAAGAAATGTTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCTCTGATGAGATTAACTGGAAGAAAGATTTTCAATG

Coding sequence (CDS)

ATGTTCATCATACAACCAGATAGGTTATACCTACACGGGGTCGTTTTCGAGGTTCGTGTCATCAACGGCTTCAAAAACAACTCATCTTTGCCTTTAGTGATATGGTGCTCCTCAAAAGAGAATGATTTAGGAGGAAGGGCTTTGCAAGAACATGATGATTTCAGCTGGAAAGTAACAACAAAACTTTGGAAGAGCAACCAATTCTCTTGTACCATGAAATGGGATGCCAAAAGGAGATCCTTTGATGCGTTTAAGGTTCCTAGGGATTTTTATCGATGTGGGCATTTCAAGAAATGTTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCTCTGATGAGATTAACTGGAAGAAAGATTTTCAATG

Protein sequence

MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKDFQX

Homology

[Close]

BLAST of Cucsa.194270 vs. TrEMBL
Match: A0A0A0LNI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G153590 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 9.2e-69
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT
Sbjct: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
           KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD
Sbjct: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120

Query: 121 FQ 123
           FQ
Sbjct: 121 FQ 122

[Close]

BLAST of Cucsa.194270 vs. TrEMBL
Match: B9H006_POPTR (Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0003s17380g PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.1e-45
Identity = 85/121 (70.25%), Postives = 96/121 (79.34%), Query Frame = 1


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           M I QP+  Y +G+ ++VRVINGFKNNSSLPLVIWCSS  +DLGGRALQE DDFSW + T
Sbjct: 20  MSIYQPE--YFYGLEYDVRVINGFKNNSSLPLVIWCSSNNDDLGGRALQEGDDFSWSLKT 79

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
             W +  F CTMKWDA RR FDAFKVPRD  RC  F+KCSW V EDGFYFS+DE+NWKKD
Sbjct: 80  NFWGTTHFLCTMKWDAMRRKFDAFKVPRDLQRCSLFRKCSWSVREDGFYFSNDEVNWKKD 138

Query: 121 F 122
           F
Sbjct: 140 F 138

[Close]

BLAST of Cucsa.194270 vs. TrEMBL
Match: M5XJ42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024197mg PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 9.2e-45
Identity = 83/122 (68.03%), Postives = 98/122 (80.33%), Query Frame = 1


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           M I+QP   Y  G+ +++RVINGF NNSSLPLVIWC+S+ +DLGGRALQEHDDFSW + T
Sbjct: 20  MSILQPQNFY--GIEYDIRVINGFTNNSSLPLVIWCASEHSDLGGRALQEHDDFSWSLRT 79

Query: 61  KLWKSNQ-FSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKK 120
             W +N  F CTMKWD  RRSF+AFK PRD  RCG F+KCSWLV EDGFYFS+DE+NW+K
Sbjct: 80  NFWGTNDHFKCTMKWDRTRRSFEAFKAPRDTQRCGPFRKCSWLVREDGFYFSNDEVNWRK 139

Query: 121 DF 122
           DF
Sbjct: 140 DF 139

[Close]

BLAST of Cucsa.194270 vs. TrEMBL
Match: B9GMH5_POPTR (Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0001s14170g PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.1e-44
Identity = 85/121 (70.25%), Postives = 95/121 (78.51%), Query Frame = 1


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           M I QP+  Y  G+ ++VRVINGF NNSSLPLVIWCSS  +DLGGRALQE DDFSW++  
Sbjct: 20  MSIYQPE--YFCGLEYDVRVINGFTNNSSLPLVIWCSSDSDDLGGRALQEGDDFSWRLQI 79

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
             W SN F CTMKWDA RR FDAFKVPRD  RC  F+ CSWLV EDGFYFS+DE+NWKKD
Sbjct: 80  NFWCSNHFRCTMKWDAMRRKFDAFKVPRDLQRCSPFRMCSWLVREDGFYFSNDEVNWKKD 138

Query: 121 F 122
           F
Sbjct: 140 F 138

[Close]

BLAST of Cucsa.194270 vs. TrEMBL
Match: A0A0D2T7P5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G162600 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.7e-43
Identity = 84/122 (68.85%), Postives = 97/122 (79.51%), Query Frame = 1


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWC-SSKENDLGGRALQEHDDFSWKVT 60
           M + QP  L+  G+ FEVRVINGF NNSSLPLVIWC S ++ D+GGRALQE DDF W++ 
Sbjct: 53  MCVYQPAHLF--GMEFEVRVINGFSNNSSLPLVIWCISQQDGDMGGRALQEGDDFGWRLK 112

Query: 61  TKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKK 120
           T +W ++ + CTMKWDAKRRSFDAFKVPRD  RC    KCSWLV EDGFYFSSDE+NWKK
Sbjct: 113 TNIWGNSHYLCTMKWDAKRRSFDAFKVPRDSQRCAPLNKCSWLVKEDGFYFSSDEVNWKK 172

Query: 121 DF 122
           DF
Sbjct: 173 DF 172

[Close]

BLAST of Cucsa.194270 vs. TAIR10
Match: AT3G24060.1 (AT3G24060.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 163.3 bits (412), Expect = 9.4e-41
Identity = 75/120 (62.50%), Postives = 91/120 (75.83%), Query Frame = 1


Query: 3   IIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKL 62
           ++QP  ++L G  F+VRVIN F++NSSLPLVIWC+S + DLGGRALQE DDF W     L
Sbjct: 26  MLQPQTMFL-GEEFDVRVINSFRDNSSLPLVIWCTSPQGDLGGRALQEGDDFEWTAKIDL 85

Query: 63  WK-SNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKDF 122
           W    +++CTMKWD+KR+ F+AFKV RD  RCG  KKCSW V EDGFYFSSDE+ W KDF
Sbjct: 86  WSWMAEYTCTMKWDSKRKQFEAFKVSRDSNRCGSTKKCSWSVREDGFYFSSDEVYWTKDF 144

[Close]

BLAST of Cucsa.194270 vs. TAIR10
Match: AT1G04645.1 (AT1G04645.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 60.5 bits (145), Expect = 8.6e-10
Identity = 28/77 (36.36%), Postives = 41/77 (53.25%), Query Frame = 1


Query: 31  PLVIWCSSKENDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF 90
           PL I C SK++DLG   +    ++ +K    LWKS  F C+ +WD++ +SFD +   RD 
Sbjct: 41  PLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQ 100

Query: 91  YRCGHFKKCSWLVTEDG 108
             C     C W +  DG
Sbjct: 101 GIC---DDCQWEIKPDG 114

[Close]

BLAST of Cucsa.194270 vs. TAIR10
Match: AT5G06020.1 (AT5G06020.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 52.4 bits (124), Expect = 2.3e-07
Identity = 28/86 (32.56%), Postives = 40/86 (46.51%), Query Frame = 1


Query: 25  KNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS-FDA 84
           KNN+   L I C SK++DLG    +E + + WK       S  + C        +  FD 
Sbjct: 52  KNNNDYLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDI 111

Query: 85  FKVPRDFYRCGHFKKCSWLVTEDGFY 110
            +  RDFYRC   + C+W   +D  Y
Sbjct: 112 DRAERDFYRC---RNCTWNAKKDSLY 134

[Close]

BLAST of Cucsa.194270 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 50.4 bits (119), Expect = 8.9e-07
Identity = 33/95 (34.74%), Postives = 45/95 (47.37%), Query Frame = 1


Query: 16  FEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWD 75
           ++V V+NG     +L   I C SKE+DLG   L+  + FSW     +  S  F C M  D
Sbjct: 41  WQVTVVNGLTTGETL--FIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKD 100

Query: 76  AKRRSFDAF-KVPRDFYRCGHFKKCSWLVTEDGFY 110
               + + F      F+RCG +K C W    DG Y
Sbjct: 101 NGHMNVNVFWDDVILFHRCG-WKNCIWTAKTDGLY 132

[Close]

BLAST of Cucsa.194270 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 49.7 bits (117), Expect = 1.5e-06
Identity = 35/101 (34.65%), Postives = 44/101 (43.56%), Query Frame = 1


Query: 16  FEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWD 75
           ++V V NG     +L   I C SKENDLG   L+  D FSW     +  S  F C M  D
Sbjct: 41  WQVTVANGLTTGETL--FIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKD 100

Query: 76  AKRRSFDAF-KVPRDFYRCGHFKKCSWLVTEDGFYFSSDEI 116
               +   F      F+RC  +K C W    DG Y  +  I
Sbjct: 101 DGHMNVKVFWDDVILFHRC-DWKNCVWTAKNDGLYLWNSAI 138

[Close]

BLAST of Cucsa.194270 vs. NCBI nr
Match: gi|449442499|ref|XP_004139019.1| (PREDICTED: uncharacterized protein LOC101209275 [Cucumis sativus])

HSP 1 Score: 267.3 bits (682), Expect = 1.3e-68
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT
Sbjct: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
           KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD
Sbjct: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120

Query: 121 FQ 123
           FQ
Sbjct: 121 FQ 122

[Close]

BLAST of Cucsa.194270 vs. NCBI nr
Match: gi|659121582|ref|XP_008460730.1| (PREDICTED: uncharacterized protein LOC103499491 [Cucumis melo])

HSP 1 Score: 257.3 bits (656), Expect = 1.4e-65
Identity = 115/122 (94.26%), Postives = 121/122 (99.18%), Query Frame = 1


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKE+DLGGRALQEHDDFSWKVTT
Sbjct: 23  VFIVQPDRLYLHGVIFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTT 82

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
           KLWKSNQFSCTMKWDAKR+SFDAFKVPRDFYRCG+FKKCSWLVTEDGFYFS DEINWKKD
Sbjct: 83  KLWKSNQFSCTMKWDAKRKSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKD 142

Query: 121 FQ 123
           FQ
Sbjct: 143 FQ 144

[Close]

BLAST of Cucsa.194270 vs. NCBI nr
Match: gi|470148069|ref|XP_004309597.1| (PREDICTED: uncharacterized protein LOC101298851 [Fragaria vesca subsp. vesca])

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-45
Identity = 87/123 (70.73%), Postives = 98/123 (79.67%), Query Frame = 1


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           M +++P  L   G  F+VRVINGF NNSSLPLV+WCSSKENDLGGRALQE DDFSW++ T
Sbjct: 20  MSLLEPQNLL--GTEFDVRVINGFTNNSSLPLVVWCSSKENDLGGRALQEKDDFSWRLRT 79

Query: 61  KLWKS--NQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWK 120
             W S  N F CTMKWD KRR FDAFK+PRD  RCG  +KCSWLV EDGFYFS+DE+NWK
Sbjct: 80  NFWGSSYNHFVCTMKWDEKRRRFDAFKIPRDIQRCGPLRKCSWLVREDGFYFSNDEVNWK 139

Query: 121 KDF 122
           KDF
Sbjct: 140 KDF 140

[Close]

BLAST of Cucsa.194270 vs. NCBI nr
Match: gi|224075585|ref|XP_002304696.1| (self-incompatibility family protein [Populus trichocarpa])

HSP 1 Score: 188.7 bits (478), Expect = 5.9e-45
Identity = 85/121 (70.25%), Postives = 96/121 (79.34%), Query Frame = 1


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           M I QP+  Y +G+ ++VRVINGFKNNSSLPLVIWCSS  +DLGGRALQE DDFSW + T
Sbjct: 20  MSIYQPE--YFYGLEYDVRVINGFKNNSSLPLVIWCSSNNDDLGGRALQEGDDFSWSLKT 79

Query: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120
             W +  F CTMKWDA RR FDAFKVPRD  RC  F+KCSW V EDGFYFS+DE+NWKKD
Sbjct: 80  NFWGTTHFLCTMKWDAMRRKFDAFKVPRDLQRCSLFRKCSWSVREDGFYFSNDEVNWKKD 138

Query: 121 F 122
           F
Sbjct: 140 F 138

[Close]

BLAST of Cucsa.194270 vs. NCBI nr
Match: gi|596253311|ref|XP_007224750.1| (hypothetical protein PRUPE_ppa024197mg [Prunus persica])

HSP 1 Score: 187.6 bits (475), Expect = 1.3e-44
Identity = 83/122 (68.03%), Postives = 98/122 (80.33%), Query Frame = 1


Query: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60
           M I+QP   Y  G+ +++RVINGF NNSSLPLVIWC+S+ +DLGGRALQEHDDFSW + T
Sbjct: 20  MSILQPQNFY--GIEYDIRVINGFTNNSSLPLVIWCASEHSDLGGRALQEHDDFSWSLRT 79

Query: 61  KLWKSNQ-FSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKK 120
             W +N  F CTMKWD  RRSF+AFK PRD  RCG F+KCSWLV EDGFYFS+DE+NW+K
Sbjct: 80  NFWGTNDHFKCTMKWDRTRRSFEAFKAPRDTQRCGPFRKCSWLVREDGFYFSNDEVNWRK 139

Query: 121 DF 122
           DF
Sbjct: 140 DF 139

The following BLAST results are available for this feature:

BLAST of Cucsa.194270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNI8_CUCSA	9.2e-69	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G153590 PE=4 SV=1	[more]
B9H006_POPTR	4.1e-45	70.25	Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0003s17380g ...	[more]
M5XJ42_PRUPE	9.2e-45	68.03	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024197mg PE=4 SV=1	[more]
B9GMH5_POPTR	2.1e-44	70.25	Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0001s14170g ...	[more]
A0A0D2T7P5_GOSRA	1.7e-43	68.85	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G162600 PE=4 SV=1	[more]

BLAST of Cucsa.194270 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24060.1	9.4e-41	62.50	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	8.6e-10	36.36	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	2.3e-07	32.56	Plant self-incompatibility protein S1 family	[more]
AT4G16295.1	8.9e-07	34.74	S-protein homologue 1	[more]
AT4G29035.1	1.5e-06	34.65	Plant self-incompatibility protein S1 family	[more]

BLAST of Cucsa.194270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442499\|ref\|XP_004139019.1\|	1.3e-68	100.00	PREDICTED: uncharacterized protein LOC101209275 [Cucumis sativus]	[more]
gi\|659121582\|ref\|XP_008460730.1\|	1.4e-65	94.26	PREDICTED: uncharacterized protein LOC103499491 [Cucumis melo]	[more]
gi\|470148069\|ref\|XP_004309597.1\|	1.6e-45	70.73	PREDICTED: uncharacterized protein LOC101298851 [Fragaria vesca subsp. vesca]	[more]
gi\|224075585\|ref\|XP_002304696.1\|	5.9e-45	70.25	self-incompatibility family protein [Populus trichocarpa]	[more]
gi\|596253311\|ref\|XP_007224750.1\|	1.3e-44	68.03	hypothetical protein PRUPE_ppa024197mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010264	Self-incomp_S1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.194270.1	Cucsa.194270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 18..121 score: 4.1
None	No IPR available	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 1..122 score: 2.6
None	No IPR available	PANTHER	PTHR31232:SF8	SUBFAMILY NOT NAMED	coord: 1..122 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.194270	Csa2G153590	Cucumber (Chinese Long) v2	cgycuB296
Cucsa.194270	MELO3C023093	Melon (DHL92) v3.5.1	cgymeB352
Cucsa.194270	CSPI02G09590	Wild cucumber (PI 183967)	cgycpiB305
Cucsa.194270	MELO3C023093.2	Melon (DHL92) v3.6.1	cgymedB347
Cucsa.194270	CsaV3_2G012000	Cucumber (Chinese Long) v3	cgycucB309

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None