Cucsa.192480 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.192480
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Locationscaffold01333 : 357710 .. 358725 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCCTTGATTGGTTGAGTGAGATAATGAAGATTGTAGAGTTCTAGATATCTTCTCATCAACCAATTAGAAGAGGATGAAGTTCCACAAAGGATAGACTTTGTGGGTCTCACCAGACACTATATAAGTACATTCTATACTTCATGGATTTTCATCAATAACTCAATTCAAAAGCACTTCGAGGACTTACTTCCTTTGAGTTGAAGTTGGTAGGCAATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGTTGTtCCTTTGAATGCATTTACCGAGCTCTCGTCCTCGGTTCGCAGCAACGGTAGAGTCACAATGAGGAAATCTGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCTGACCGTGTCAAGTACCTTGGACCGTTCTCTGGTGAGCCTCCATCTTACCTCAAAGGTGAATTCCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGACCCCGAGACATTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCTGAGCTTCTTTCTAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTCATTCATGCACAGAGCATTTTGGCAATTTGGGCATCTCAAGTAGTGTTAATGGGTGCTGTTGAAGGTTACCGTATTGCTGGAGGACCACTCGGAGAGATTACTGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTTGGGTTGGCTGATGATCCAGAGGCATTTTCAGAACTTAAGGTGAAAGAACTTAAGAATGGTCGTCTTGCAATGTTTTCCATGTtCGGGTTTTTCGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCAGACCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGAAAGTGA

mRNA sequence

ATGGCAATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGTTGTTCCTTTGAATGCATTTACCGAGCTCTCGTCCTCGGTTCGCAGCAACGGTAGAGTCACAATGAGGAAATCTGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCTGACCGTGTCAAGTACCTTGGACCGTTCTCTGGTGAGCCTCCATCTTACCTCAAAGGTGAATTCCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGACCCCGAGACATTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCTGAGCTTCTTTCTAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTCATTCATGCACAGAGCATTTTGGCAATTTGGGCATCTCAAGTAGTGTTAATGGGTGCTGTTGAAGGTTACCGTATTGCTGGAGGACCACTCGGAGAGATTACTGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTTGGGTTGGCTGATGATCCAGAGGCATTTTCAGAACTTAAGGTGAAAGAACTTAAGAATGGTCGTCTTGCAATGTTTTCCATGTTCGGGTTTTTCGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCAGACCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGAAAGTGA

Coding sequence (CDS)

ATGGCAATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGTTGTtCCTTTGAATGCATTTACCGAGCTCTCGTCCTCGGTTCGCAGCAACGGTAGAGTCACAATGAGGAAATCTGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCTGACCGTGTCAAGTACCTTGGACCGTTCTCTGGTGAGCCTCCATCTTACCTCAAAGGTGAATTCCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGACCCCGAGACATTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCTGAGCTTCTTTCTAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTCATTCATGCACAGAGCATTTTGGCAATTTGGGCATCTCAAGTAGTGTTAATGGGTGCTGTTGAAGGTTACCGTATTGCTGGAGGACCACTCGGAGAGATTACTGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTTGGGTTGGCTGATGATCCAGAGGCATTTTCAGAACTTAAGGTGAAAGAACTTAAGAATGGTCGTCTTGCAATGTTTTCCATGTtCGGGTTTTTCGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCAGACCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGAAAGTGA

Protein sequence

MAMAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK*
Homology
[Close]
BLAST of Cucsa.192480 vs. Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 4.3e-133
Identity = 235/270 (87.04%), Postives = 246/270 (91.11%), Query Frame = 1 

Query: 1   MAMAAMALSS-TFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPA--ASSGSPWYGPDRV 60
           MA + MALSS TF GK V L+     SS +  NGRVTMRK+   A  ASSGSPWYGPDRV
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPS---SSEITGNGRVTMRKTATKAKPASSGSPWYGPDRV 60

Query: 61  KYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 120
           KYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 61  KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 120

Query: 121 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYR 180
           ELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR
Sbjct: 121 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 180

Query: 181 IAGGPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 240
           IAGGPLGE+ DP+YPGGSFDPLGLADDPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 240

Query: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 268
           KGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 KGPLENLADHLADPVNNNAWAFATNFVPGK 267

[Close]
BLAST of Cucsa.192480 vs. Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 4.8e-132
Identity = 230/269 (85.50%), Postives = 243/269 (90.33%), Query Frame = 1 

Query: 1   MAMAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPA--ASSGSPWYGPDRVK 60
           MA +  ALSS F GK V L+     SS V  NG+VTMRK+   A   SSGSPWYGPDRVK
Sbjct: 1   MAASTTALSSPFAGKAVKLSPS---SSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVK 60

Query: 61  YLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120
           YLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 61  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 120

Query: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRI 180
           LL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+
Sbjct: 121 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRV 180

Query: 181 AGGPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           AGGPLGE+ DP+YPGGSFDPLGLA+DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 AGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLADHLADPVNNNAWAYATNFVPGK 268
           GPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 GPLENLADHLADPVNNNAWSYATNFVPGK 266

[Close]
BLAST of Cucsa.192480 vs. Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 6.3e-132
Identity = 233/267 (87.27%), Postives = 243/267 (91.01%), Query Frame = 1 

Query: 2   AMAAMALSS-TFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYL 61
           A ++MALSS +  GK V      +L  S    GRV+MRK+     SSGSPWYGPDRVKYL
Sbjct: 3   AASSMALSSPSLAGKAV------KLGPSAPEVGRVSMRKTVTKQVSSGSPWYGPDRVKYL 62

Query: 62  GPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121
           GPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 63  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122

Query: 122 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 181
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAG
Sbjct: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG 182

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE+TDPIYPGGSFDPLGLADDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 183 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLA PVNNNAWAYATNFVPGK
Sbjct: 243 LENLADHLAGPVNNNAWAYATNFVPGK 263

[Close]
BLAST of Cucsa.192480 vs. Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 8.2e-132
Identity = 231/270 (85.56%), Postives = 245/270 (90.74%), Query Frame = 1 

Query: 1   MAMAAMALSS-TFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPA--ASSGSPWYGPDRV 60
           MA + MALSS +F GK V L+     SS +  NG+VTMRK+   A   SSGSPWYGPDRV
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPS---SSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRV 60

Query: 61  KYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 120
           KYLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP
Sbjct: 61  KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 120

Query: 121 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYR 180
           ELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR
Sbjct: 121 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 180

Query: 181 IAGGPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 240
           +AGGPLGE+ DP+YPGGSFDPLGLA+DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 VAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 240

Query: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 268
           KGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 267

[Close]
BLAST of Cucsa.192480 vs. Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 8.2e-132
Identity = 232/271 (85.61%), Postives = 245/271 (90.41%), Query Frame = 1 

Query: 1   MAMAAMALSST-FTGKVVPLNAFTELSSSVRSNGRVTMRKSG---KPAASSGSPWYGPDR 60
           MA + MALSST F GK V       + SS+    RVTMRK+    KPAASSGSPWYGPDR
Sbjct: 1   MASSTMALSSTAFAGKAV------NVPSSLFGEARVTMRKTAAKAKPAASSGSPWYGPDR 60

Query: 61  VKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 120
           V YLGP SGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF
Sbjct: 61  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 120

Query: 121 PELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGY 180
           PELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGA+EGY
Sbjct: 121 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGY 180

Query: 181 RIAGGPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVT 240
           R+AGGPLGE+ DP+YPGG+FDPLGLADDPEAF+++KVKELKNGRLAMFSMFGFFVQAIVT
Sbjct: 181 RVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVT 240

Query: 241 GKGPLENLADHLADPVNNNAWAYATNFVPGK 268
           GKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 GKGPLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Cucsa.192480 vs. TrEMBL
Match: A0A0A0LCY3_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_3G664560 PE=3 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 2.5e-151
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 1 

Query: 3   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP 62
           MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 63  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 122
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 123 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 182
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 183 LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 242
           LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 243 NLADHLADPVNNNAWAYATNFVPGK 268
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Cucsa.192480 vs. TrEMBL
Match: B9RN67_RICCO (Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis GN=RCOM_1344080 PE=3 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 1.1e-140
Identity = 247/267 (92.51%), Postives = 258/267 (96.63%), Query Frame = 1 

Query: 3   MAAMALSSTFTGKVVPLNAFTELSSSVRS-NGRVTMRK-SGKPAASSGSPWYGPDRVKYL 62
           MA M LSSTFTGK VPL+A TEL ++VRS NGRVTMRK +GKPAASSGSPWYGPDRVKYL
Sbjct: 1   MATMTLSSTFTGKAVPLSAQTELPATVRSSNGRVTMRKTAGKPAASSGSPWYGPDRVKYL 60

Query: 63  GPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 182
           +RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA+QVVLMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG 180

Query: 183 GPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242
           GPLGE+TDP+YPGGSFDPLGLADDPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 243 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]
BLAST of Cucsa.192480 vs. TrEMBL
Match: B9GSZ2_POPTR (Chlorophyll a-b binding protein, chloroplastic OS=Populus trichocarpa GN=POPTR_0002s19010g PE=3 SV=2)

HSP 1 Score: 496.5 bits (1277), Expect = 2.0e-137
Identity = 239/266 (89.85%), Postives = 250/266 (93.98%), Query Frame = 1 

Query: 3   MAAMALSSTFTGKVVPLNAFTELSSSV-RSNGRVTMRKSGKPAASSGSPWYGPDRVKYLG 62
           MA+M LSSTFT K VPLN  TE SS+    NGRV+MRK+    A SGSPWYGPDRVKYLG
Sbjct: 1   MASMTLSSTFTSKAVPLNGITEFSSATCGGNGRVSMRKAAGKVADSGSPWYGPDRVKYLG 60

Query: 63  PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 122
           PFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 123 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG 182
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA+QVVLMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGG 180

Query: 183 PLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 242
           PLGE+TDP+YPGGSFDPLGLADDPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 243 ENLADHLADPVNNNAWAYATNFVPGK 268
           ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAYATNFVPGK 266

[Close]
BLAST of Cucsa.192480 vs. TrEMBL
Match: M5XUC3_PRUPE (Chlorophyll a-b binding protein, chloroplastic OS=Prunus persica GN=PRUPE_ppa010066mg PE=3 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 2.0e-137
Identity = 240/266 (90.23%), Postives = 253/266 (95.11%), Query Frame = 1 

Query: 3   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSG-KPAASSGSPWYGPDRVKYLG 62
           MA MALSS FTGK +PLN  TE S+ V+ NGRV+MR++  KPA SSGSPWYGPDRVKYLG
Sbjct: 1   MATMALSSPFTGKAIPLNTQTEFST-VQGNGRVSMRRAARKPAVSSGSPWYGPDRVKYLG 60

Query: 63  PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 122
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS
Sbjct: 61  PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120

Query: 123 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG 182
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA+QVVLMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRIAGG 180

Query: 183 PLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 242
           PLGE+TDP+YPGGSFDPLGLADDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+
Sbjct: 181 PLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 240

Query: 243 ENLADHLADPVNNNAWAYATNFVPGK 268
           ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Cucsa.192480 vs. TrEMBL
Match: F6HZE1_VITVI (Chlorophyll a-b binding protein, chloroplastic OS=Vitis vinifera GN=VIT_07s0005g02220 PE=3 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 2.5e-135
Identity = 236/265 (89.06%), Postives = 246/265 (92.83%), Query Frame = 1 

Query: 3   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP 62
           MA MALSS F GKVVPLN  TE SS VR +GR++MRKS   A  SGSPWYGPDRVKYLGP
Sbjct: 1   MATMALSSPFVGKVVPLNPGTEFSSKVRGDGRISMRKSF--AKPSGSPWYGPDRVKYLGP 60

Query: 63  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 122
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSR 120

Query: 123 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 182
           NGVKFGEAVWFKAG+QIFSEGGLDYLGNP L+HAQSILAIWA QV+LMGAVEGYRI GGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPGLVHAQSILAIWACQVILMGAVEGYRIGGGP 180

Query: 183 LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 242
           LGE+ DP+YPGGSFDPLGLADDPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 243 NLADHLADPVNNNAWAYATNFVPGK 268
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 263

[Close]
BLAST of Cucsa.192480 vs. TAIR10
Match: AT2G34430.1 (AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.8e-130
Identity = 227/269 (84.39%), Postives = 242/269 (89.96%), Query Frame = 1 

Query: 1   MAMAAMALSS-TFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKY 60
           MA + MALSS   TGK V L+     +S V   GR+TMRK+ KP   SGSPWYG DRVKY
Sbjct: 1   MAASTMALSSPALTGKAVKLSP---AASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKY 60

Query: 61  LGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 120
           LGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 61  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 120

Query: 121 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIA 180
           L+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+A
Sbjct: 121 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 180

Query: 181 G-GPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGK 240
           G GPLGE  D +YPGGSFDPLGLA DPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 181 GDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 240

Query: 241 GPLENLADHLADPVNNNAWAYATNFVPGK 268
           GPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 GPLENLADHLADPVNNNAWAFATNFVPGK 266

[Close]
BLAST of Cucsa.192480 vs. TAIR10
Match: AT2G34420.1 (AT2G34420.1 photosystem II light harvesting complex gene B1B2)

HSP 1 Score: 455.7 bits (1171), Expect = 2.0e-128
Identity = 228/270 (84.44%), Postives = 241/270 (89.26%), Query Frame = 1 

Query: 1   MAMAAMALSS-TFTGKVVPLNAFTELSSSVRSNGRVTMRKS-GKPAASSGSPWYGPDRVK 60
           MA + MALSS  F GK V   A     S V  +GRVTMRK+  KP   SGSPWYG DRVK
Sbjct: 1   MASSTMALSSPAFAGKAVKPAA-----SDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVK 60

Query: 61  YLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120
           YLGPFSGEPPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE
Sbjct: 61  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 120

Query: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRI 180
           LL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+
Sbjct: 121 LLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV 180

Query: 181 AG-GPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 240
           AG GPLGE  D +YPGGSFDPLGLA DPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 AGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 240

Query: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 268
           KGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 KGPLENLADHLADPVNNNAWAFATNFVPGK 265

[Close]
BLAST of Cucsa.192480 vs. TAIR10
Match: AT1G29930.1 (AT1G29930.1 chlorophyll A/B binding protein 1)

HSP 1 Score: 454.5 bits (1168), Expect = 4.5e-128
Identity = 226/270 (83.70%), Postives = 242/270 (89.63%), Query Frame = 1 

Query: 1   MAMAAMALSS-TFTGKVVPLNAFTELSSSVRSNGRVTMRKS-GKPAASSGSPWYGPDRVK 60
           MA + MALSS  F GK V L+     +S V  +GRVTMRK+  KP   SGSPWYG DRVK
Sbjct: 1   MAASTMALSSPAFAGKAVKLSP---AASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVK 60

Query: 61  YLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120
           YLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE
Sbjct: 61  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 120

Query: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRI 180
           LL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+
Sbjct: 121 LLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV 180

Query: 181 AG-GPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 240
           AG GPLGE  D +YPGGSFDPLGLA DPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 AGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 240

Query: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 268
           KGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 KGPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]
BLAST of Cucsa.192480 vs. TAIR10
Match: AT1G29920.1 (AT1G29920.1 chlorophyll A/B-binding protein 2)

HSP 1 Score: 454.1 bits (1167), Expect = 5.8e-128
Identity = 226/270 (83.70%), Postives = 242/270 (89.63%), Query Frame = 1 

Query: 1   MAMAAMALSS-TFTGKVVPLNAFTELSSSVRSNGRVTMRKS-GKPAASSGSPWYGPDRVK 60
           MA + MALSS  F GK V L+     +S V  +GRVTMRK+  KP   SGSPWYG DRVK
Sbjct: 1   MAASTMALSSPAFAGKAVNLSP---AASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVK 60

Query: 61  YLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120
           YLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE
Sbjct: 61  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 120

Query: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRI 180
           LL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+
Sbjct: 121 LLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV 180

Query: 181 AG-GPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 240
           AG GPLGE  D +YPGGSFDPLGLA DPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 AGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 240

Query: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 268
           KGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 KGPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]
BLAST of Cucsa.192480 vs. TAIR10
Match: AT1G29910.1 (AT1G29910.1 chlorophyll A/B binding protein 3)

HSP 1 Score: 454.1 bits (1167), Expect = 5.8e-128
Identity = 226/270 (83.70%), Postives = 242/270 (89.63%), Query Frame = 1 

Query: 1   MAMAAMALSS-TFTGKVVPLNAFTELSSSVRSNGRVTMRKS-GKPAASSGSPWYGPDRVK 60
           MA + MALSS  F GK V L+     +S V  +GRVTMRK+  KP   SGSPWYG DRVK
Sbjct: 1   MAASTMALSSPAFAGKAVNLSP---AASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVK 60

Query: 61  YLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 120
           YLGPFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE
Sbjct: 61  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 120

Query: 121 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRI 180
           LL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+
Sbjct: 121 LLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV 180

Query: 181 AG-GPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTG 240
           AG GPLGE  D +YPGGSFDPLGLA DPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 181 AGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 240

Query: 241 KGPLENLADHLADPVNNNAWAYATNFVPGK 268
           KGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 KGPIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]
BLAST of Cucsa.192480 vs. NCBI nr
Match: gi|449461699|ref|XP_004148579.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus])

HSP 1 Score: 542.7 bits (1397), Expect = 3.5e-151
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 1 

Query: 3   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP 62
           MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 63  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 122
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 123 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 182
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 183 LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 242
           LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 243 NLADHLADPVNNNAWAYATNFVPGK 268
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Cucsa.192480 vs. NCBI nr
Match: gi|659093259|ref|XP_008447450.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo])

HSP 1 Score: 533.9 bits (1374), Expect = 1.6e-148
Identity = 260/265 (98.11%), Postives = 263/265 (99.25%), Query Frame = 1 

Query: 3   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP 62
           MAAMALSSTFTGKVVPLNA TELSSSVRSNGR++MRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 63  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 122
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 123 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 182
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 183 LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 242
           LGEITDPIYPGGSFDPLGLADDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 243 NLADHLADPVNNNAWAYATNFVPGK 268
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]
BLAST of Cucsa.192480 vs. NCBI nr
Match: gi|255548299|ref|XP_002515206.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Ricinus communis])

HSP 1 Score: 507.3 bits (1305), Expect = 1.6e-140
Identity = 247/267 (92.51%), Postives = 258/267 (96.63%), Query Frame = 1 

Query: 3   MAAMALSSTFTGKVVPLNAFTELSSSVRS-NGRVTMRK-SGKPAASSGSPWYGPDRVKYL 62
           MA M LSSTFTGK VPL+A TEL ++VRS NGRVTMRK +GKPAASSGSPWYGPDRVKYL
Sbjct: 1   MATMTLSSTFTGKAVPLSAQTELPATVRSSNGRVTMRKTAGKPAASSGSPWYGPDRVKYL 60

Query: 63  GPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 122
           GPFSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 182
           +RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA+QVVLMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG 180

Query: 183 GPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242
           GPLGE+TDP+YPGGSFDPLGLADDPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 243 LENLADHLADPVNNNAWAYATNFVPGK 268
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]
BLAST of Cucsa.192480 vs. NCBI nr
Match: gi|694370711|ref|XP_009363087.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Pyrus x bretschneideri])

HSP 1 Score: 498.0 bits (1281), Expect = 1.0e-137
Identity = 242/266 (90.98%), Postives = 253/266 (95.11%), Query Frame = 1 

Query: 3   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGK-PAASSGSPWYGPDRVKYLG 62
           MA MALSS FTGK +PLN  TE S+ V+ NGRV+MRK+GK PA SSGSPWYGPDRVKYLG
Sbjct: 1   MATMALSSPFTGKAIPLNTQTEFSA-VQGNGRVSMRKTGKKPAVSSGSPWYGPDRVKYLG 60

Query: 63  PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 122
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS
Sbjct: 61  PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120

Query: 123 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG 182
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA+QVVLMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRIAGG 180

Query: 183 PLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 242
           PLGEITDP+YPGGSFDPLGLADDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+
Sbjct: 181 PLGEITDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 240

Query: 243 ENLADHLADPVNNNAWAYATNFVPGK 268
           ENLADHLADPV NNAWAYATNFVPGK
Sbjct: 241 ENLADHLADPVTNNAWAYATNFVPGK 265

[Close]
BLAST of Cucsa.192480 vs. NCBI nr
Match: gi|658015745|ref|XP_008343203.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Malus domestica])

HSP 1 Score: 498.0 bits (1281), Expect = 1.0e-137
Identity = 242/266 (90.98%), Postives = 253/266 (95.11%), Query Frame = 1 

Query: 3   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGK-PAASSGSPWYGPDRVKYLG 62
           MA MALSS FTGK +PLN  TE S+ V+ NGRV+MRK+GK PA SSGSPWYGPDRVKYLG
Sbjct: 68  MATMALSSPFTGKAIPLNTQTEFSA-VQGNGRVSMRKTGKKPAVSSGSPWYGPDRVKYLG 127

Query: 63  PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 122
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS
Sbjct: 128 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 187

Query: 123 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG 182
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWA+QVVLMGAVEGYRIAGG
Sbjct: 188 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRIAGG 247

Query: 183 PLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 242
           PLGEITDP+YPGGSFDPLGLADDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+
Sbjct: 248 PLGEITDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 307

Query: 243 ENLADHLADPVNNNAWAYATNFVPGK 268
           ENLADHLADPV NNAWAYATNFVPGK
Sbjct: 308 ENLADHLADPVTNNAWAYATNFVPGK 332

The following BLAST results are available for this feature:
BLAST of Cucsa.192480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CB2G_SOLLC4.3e-13387.04Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB... [more]
CB21_TOBAC4.8e-13285.50Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 ... [more]
CB23_SOYBN6.3e-13287.27Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=... [more]
CB24_TOBAC8.2e-13285.56Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 ... [more]
CB29_MAIZE8.2e-13285.61Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=... [more]
BLAST of Cucsa.192480 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCY3_CUCSA2.5e-151100.00Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_3G66456... [more]
B9RN67_RICCO1.1e-14092.51Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis GN=RCOM_13440... [more]
B9GSZ2_POPTR2.0e-13789.85Chlorophyll a-b binding protein, chloroplastic OS=Populus trichocarpa GN=POPTR_0... [more]
M5XUC3_PRUPE2.0e-13790.23Chlorophyll a-b binding protein, chloroplastic OS=Prunus persica GN=PRUPE_ppa010... [more]
F6HZE1_VITVI2.5e-13589.06Chlorophyll a-b binding protein, chloroplastic OS=Vitis vinifera GN=VIT_07s0005g... [more]
BLAST of Cucsa.192480 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G34430.12.8e-13084.39 light-harvesting chlorophyll-protein complex II subunit B1[more]
AT2G34420.12.0e-12884.44 photosystem II light harvesting complex gene B1B2[more]
AT1G29930.14.5e-12883.70 chlorophyll A/B binding protein 1[more]
AT1G29920.15.8e-12883.70 chlorophyll A/B-binding protein 2[more]
AT1G29910.15.8e-12883.70 chlorophyll A/B binding protein 3[more]
BLAST of Cucsa.192480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461699|ref|XP_004148579.1|3.5e-151100.00PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus... [more]
gi|659093259|ref|XP_008447450.1|1.6e-14898.11PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo][more]
gi|255548299|ref|XP_002515206.1|1.6e-14092.51PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Ricinus communis][more]
gi|694370711|ref|XP_009363087.1|1.0e-13790.98PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Pyrus x bretsch... [more]
gi|658015745|ref|XP_008343203.1|1.0e-13790.98PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Malus domestica... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001344Chloro_AB-bd_pln
IPR022796Chloroa_b-bind
IPR023329Chlorophyll_a/b-bd_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0009765photosynthesis, light harvesting
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0018298 protein-chromophore linkage
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0009523 photosystem II
cellular_component GO:0016020 membrane
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.192480.1Cucsa.192480.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 1..267
score: 6.4E
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 67..233
score: 7.5
IPR023329Chlorophyll a/b binding protein domainGENE3DG3DSA:1.10.3460.10coord: 60..259
score: 2.4
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 50..264
score: 1.2
NoneNo IPR availablePANTHERPTHR21649:SF26CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 1..267
score: 6.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.192480Cla017325Watermelon (97103) v1cgywmB371
Cucsa.192480Csa3G664560Cucumber (Chinese Long) v2cgycuB294
Cucsa.192480MELO3C012912Melon (DHL92) v3.5.1cgymeB346
Cucsa.192480ClCG10G011800Watermelon (Charleston Gray)cgywcgB349
Cucsa.192480CSPI03G29150Wild cucumber (PI 183967)cgycpiB303
Cucsa.192480CmaCh14G009560Cucurbita maxima (Rimu)cgycmaB0556
Cucsa.192480CmaCh01G002650Cucurbita maxima (Rimu)cgycmaB0559
Cucsa.192480CmoCh01G002760Cucurbita moschata (Rifu)cgycmoB0560
Cucsa.192480CmoCh14G009780Cucurbita moschata (Rifu)cgycmoB0557
Cucsa.192480Lsi03G011510Bottle gourd (USVL1VR-Ls)cgylsiB326
Cucsa.192480Cp4.1LG03g04900Cucurbita pepo (Zucchini)cgycpeB0540
Cucsa.192480Cp4.1LG02g15910Cucurbita pepo (Zucchini)cgycpeB0536
Cucsa.192480MELO3C012912.2Melon (DHL92) v3.6.1cgymedB341
Cucsa.192480CsaV3_3G031580Cucumber (Chinese Long) v3cgycucB307
Cucsa.192480Cla97C10G194600Watermelon (97103) v2cgywmbB355
Cucsa.192480Bhi11G001128Wax gourdcgywgoB396
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.192480Cucurbita pepo (Zucchini)cgycpeB0535
Cucsa.192480Cucurbita pepo (Zucchini)cgycpeB0539
Cucsa.192480Bottle gourd (USVL1VR-Ls)cgylsiB325
Cucsa.192480Melon (DHL92) v3.6.1cgymedB342
Cucsa.192480Silver-seed gourdcarcgyB0860
Cucsa.192480Silver-seed gourdcarcgyB0861
Cucsa.192480Silver-seed gourdcarcgyB0929
Cucsa.192480Silver-seed gourdcarcgyB0930
Cucsa.192480Watermelon (97103) v2cgywmbB354
Cucsa.192480Wax gourdcgywgoB395
Cucsa.192480Cucurbita maxima (Rimu)cgycmaB0555
Cucsa.192480Cucurbita maxima (Rimu)cgycmaB0557
Cucsa.192480Cucurbita moschata (Rifu)cgycmoB0556
Cucsa.192480Cucurbita moschata (Rifu)cgycmoB0558
Cucsa.192480Melon (DHL92) v3.5.1cgymeB347
Cucsa.192480Watermelon (Charleston Gray)cgywcgB348
Cucsa.192480Watermelon (97103) v1cgywmB370