Cucsa.192430 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGAAGAAGCAACAAAACAACAAGGCGTCTAATTACAATATCAACAGCTGGAAGCAGATGGCAAGGGAAATGGACCTGCGATTACCTGCTTTCCCTGCGAGACCTCAACTTAGAAGACTTGGTAGAAGATGAAAACAAAAaTGCACATGTCTTCATCAACCTCTGTATTGAGAAGGTAATTTCAATACTTTTCTCTCTCCAAAACTCTATTTTATGTATAACATTAATGAACGCACCTTGAATCTAACTCCAACAACATCTAACGATGGATTTGATCCATCTCCAATAGAATCGAAAGAATGAAACTTGTTTCTTTTtCTTTTtCATTTTTTGTGGAGGAGCCTGCTGAAGAATCCGTTTCTCAGCTCCAAGAGAATAGACATCGAACAATCACTTTTTAAGCAATTTAAAGAATTCAAACAGCACAAATGAGAGCAATTCTACACAAAATGCTCTATTCGGTAACTATATCACTAACAGTTTCCCTTTGTTTTTACCAGCATGCAAGTTTCGGGTTCACTGTGGATGGAAGGATCAACACATCATTCACTCGAAAGTGTTGTGCCTGTTCTTCGCCATACTGCAGAGAGGTCACTGTTTAAATAATAAAAAAaCGATAGAATCACGTATGGCTTATTCTTAGTCATCCGTATCATATCTATCCATGAAGTTTCAATTTATAACACTCCAACCAATGTTCTAACACAATTATCTTAATCAAACAGATCAATGCAAATTTTAATGTACTGGTTCTGTCATCAAACAGAGCCAATAGGGAAATTCATCTTCCAGAGATTGGAGGCGACGATCCTTCGGTAAGTTTTTGCATTTCTTCACTTCAACTACTTAGAAGTATGACAACCATCTTCAATTAAACAGGTAATCTATGTTAAACCTGGACTTGAAGCCGATCTAGATTCATTGGTACGTGACACAATTAGGCTTACCACCTCAACCAAGGTGAGAAGTTGAATGCAAACATAATTAGCCTACTTATCAATAACTATTAATCTAAAAATACTGCCAAGATTCAATTGGAAGAAGTTAACAAAATAGCCTACCTCTTCCAGGACACTTGCTCAGAGATGTGTGAGAAATCTCAACCCACAGTGCAATGTAAGTGGTCAAGTGTCACTGACTCAAGATTCCACTTGCAATTAACGTTGGGACTAATTGAGAAATGTTCATTGCAGATATTGGTGCACAGAACGCTGCATCTATAGACAAGAGGTGGTCCAGGCTTTTGGAGCTTAGAAAATCTAATTCATAG ATGAAGAGAAGAAGCAACAAAACAACAAGGCGTCTAATTACAATATCAACAGCTGGAAGCAGATGGCAAGGGAAATGGACCTGCGATTACCTGCTTTCCCTGCGAGACCTCAACTTAGAAGACTTGGTAGAAGATGAAAACAAAAATGCACATGTCTTCATCAACCTCTGTATTGAGAAGCATGCAAGTTTCGGGTTCACTGTGGATGGAAGGATCAACACATCATTCACTCGAAAGTGTTGTGCCTGTTCTTCGCCATACTGCAGAGAGATCAATGCAAATTTTAATGTACTGGTTCTGTCATCAAACAGAGCCAATAGGGAAATTCATCTTCCAGAGATTGGAGGCGACGATCCTTCGGTAATCTATGTTAAACCTGGACTTGAAGCCGATCTAGATTCATTGGTACGTGACACAATTAGGCTTACCACCTCAACCAAGGACACTTGCTCAGAGATGTGTGAGAAATCTCAACCCACAGTGCAATATATTGGTGCACAGAACGCTGCATCTATAGACAAGAGGTGGTCCAGGCTTTTGGAGCTTAGAAAATCTAATTCATAG ATGAAGAGAAGAAGCAACAAAACAACAAGGCGTCTAATTACAATATCAACAGCTGGAAGCAGATGGCAAGGGAAATGGACCTGCGATTACCTGCTTTCCCTGCGAGACCTCAACTTAGAAGACTTGGTAGAAGATGAAAACAAAAaTGCACATGTCTTCATCAACCTCTGTATTGAGAAGCATGCAAGTTTCGGGTTCACTGTGGATGGAAGGATCAACACATCATTCACTCGAAAGTGTTGTGCCTGTTCTTCGCCATACTGCAGAGAGATCAATGCAAATTTTAATGTACTGGTTCTGTCATCAAACAGAGCCAATAGGGAAATTCATCTTCCAGAGATTGGAGGCGACGATCCTTCGGTAATCTATGTTAAACCTGGACTTGAAGCCGATCTAGATTCATTGGTACGTGACACAATTAGGCTTACCACCTCAACCAAGGACACTTGCTCAGAGATGTGTGAGAAATCTCAACCCACAGTGCAATATATTGGTGCACAGAACGCTGCATCTATAGACAAGAGGTGGTCCAGGCTTTTGGAGCTTAGAAAATCTAATTCATAG MKRRSNKTTRRLITISTAGSRWQGKWTCDYLLSLRDLNLEDLVEDENKNAHVFINLCIEKHASFGFTVDGRINTSFTRKCCACSSPYCREINANFNVLVLSSNRANREIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSEMCEKSQPTVQYIGAQNAASIDKRWSRLLELRKSNS*
BLAST of Cucsa.192430 vs. TrEMBL
Match: A0A0A0L9P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G656510 PE=4 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 1.2e-99 Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 1
BLAST of Cucsa.192430 vs. TrEMBL
Match: A0A059AB01_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00853 PE=4 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 5.1e-71 Identity = 130/186 (69.89%), Postives = 150/186 (80.65%), Query Frame = 1
BLAST of Cucsa.192430 vs. TrEMBL
Match: A0A061EGJ1_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_011315 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 3.7e-69 Identity = 132/187 (70.59%), Postives = 159/187 (85.03%), Query Frame = 1
BLAST of Cucsa.192430 vs. TrEMBL
Match: A0A061E9V3_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_011315 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.0e-63 Identity = 126/187 (67.38%), Postives = 154/187 (82.35%), Query Frame = 1
BLAST of Cucsa.192430 vs. TrEMBL
Match: A0A0B0N5K9_GOSAR (Putative E3 ubiquitin-protein ligase OS=Gossypium arboreum GN=F383_19649 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 4.4e-62 Identity = 124/187 (66.31%), Postives = 147/187 (78.61%), Query Frame = 1
BLAST of Cucsa.192430 vs. TAIR10
Match: AT3G19800.1 (AT3G19800.1 Protein of unknown function (DUF177)) HSP 1 Score: 226.5 bits (576), Expect = 1.4e-59 Identity = 109/180 (60.56%), Postives = 136/180 (75.56%), Query Frame = 1
BLAST of Cucsa.192430 vs. NCBI nr
Match: gi|778688735|ref|XP_011652827.1| (PREDICTED: uncharacterized protein LOC101202864 [Cucumis sativus]) HSP 1 Score: 370.5 bits (950), Expect = 1.7e-99 Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 1
BLAST of Cucsa.192430 vs. NCBI nr
Match: gi|700203390|gb|KGN58523.1| (hypothetical protein Csa_3G656510 [Cucumis sativus]) HSP 1 Score: 370.5 bits (950), Expect = 1.7e-99 Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 1
BLAST of Cucsa.192430 vs. NCBI nr
Match: gi|778682881|ref|XP_011651803.1| (PREDICTED: uncharacterized protein LOC101221885 isoform X1 [Cucumis sativus]) HSP 1 Score: 369.8 bits (948), Expect = 2.9e-99 Identity = 180/185 (97.30%), Postives = 183/185 (98.92%), Query Frame = 1
BLAST of Cucsa.192430 vs. NCBI nr
Match: gi|778682884|ref|XP_011651804.1| (PREDICTED: uncharacterized protein LOC101221885 isoform X2 [Cucumis sativus]) HSP 1 Score: 367.9 bits (943), Expect = 1.1e-98 Identity = 179/184 (97.28%), Postives = 182/184 (98.91%), Query Frame = 1
BLAST of Cucsa.192430 vs. NCBI nr
Match: gi|659123848|ref|XP_008461873.1| (PREDICTED: uncharacterized protein LOC103500366 isoform X1 [Cucumis melo]) HSP 1 Score: 360.5 bits (924), Expect = 1.7e-96 Identity = 175/185 (94.59%), Postives = 179/185 (96.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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