Cucsa.184900 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCACAATTACCTCCAAAGCAAAAATCTATGGTCAAACGCAGCAAAAGCATTACTATCTGAAATCTGGTTTGAATGGAATCAAAGAGTCTTCGACGACAAGCCTTGCGACTGAGCAGCTTGCTTCGATTCATTGCGTCTCCTTGCCTCATCTTGGTGTTCACTCTCAAAGCTTTACACTGCCTACTCAATCCAAGAAATTTGCCTTAATTGGAATGTTTTTCTCTCTTTAGCTTAGATTTGCTCGATAATTTCAAGTTCTAATTCCTTCAGACTTGTGAGGTCCTTAAACTTGTACCCAAATGTATCTCATAATTGATAGTAAACTTTGTATCATTATCATCAAAATATATTAAAAAAATATGTTTCCTTTCCAAAAAAAAAATATTTTACAATTCTCTGTAGACAAATGTTACTAATATTCTGTATTTATTAAATCTACTGGACTAGGCTGGAGGAGCTGCACCTCCAAACCCTAGCCCTAGGATAAGGGGGCGCATTCTGTGGCATTGTGCTTTCCTTGCTTTTCTTTGGGAATGTGGTTAGAGCGAAATTGGAGAGTTTTTAGGTAAATTGAGAGATCTTGAGAAGAGCTTTTGGAATGGACTGTTTTTATACAACTACTTGGGGGTGTGGGCGTTTCTCTTATTTATTTATTATTGTTATATATATATATATGTATGTATTTATTTATTTTGTATTGTTTCATTTGTTCTCAGTAAAAGTAGGTTCTTTTAATTAAAGAGAAGAACTGTTAGGCTAAATCCCCATTTCTTTGAGAGGTTGTGCTGTTGAATCTTTTTCTGTAAGATTGCCCTTTCAATGTTTTGCAGGTTTGGTCATGTTTACAACACTCTTCAGACAAAGCTCACAAAAACTCTTCTCAATGCATTTTTAGACCCCAAACGGGCTTTGACTCAACATTATGGTGCAATTCAAGGATTAGCAGCCTTGGGGATGAATGTGGTATGCTCTTTTCACACGCTTCTTTAATTAGTCTAGGGAGTTGAAGATTGCTAGATTGCAGAAGCAAGCCAAAAGGAAAATGATTGTGCAGAAAGAAAACCAACATGTTTGTGTAAAAATTTATGCAAAGCAATAAAACGGAAGAAAGAAGGGAAGAGATCTTAAGAAAGTTGCCTATGATTTCCATTATAACATACCAAATCAGGTTGAATGTAAGCGATGTGTGAGAATAATGTGCTGATTTATCCGAATTGAATATGCAGGTCAATAAATTTCATCCTTGGTATACAAACGGTGTTCCTTTAAAAATGTTCCTTTTGGCTTTCTACTTGTTTCTCCCATCCAAATGTTTGGTTTTCTAACATTATATCAAGGTTTATATGATCAAATGTTGACATTTCTTTTCATCTCACCCACACCATTTGGCTGCCGCAACTACCTTTAATTTAAACATCTTTTGCTTTTTCGCAACAAAATAGAGCTGTATTTTATAAAGTACTTGGCCTTTATATTATCATCACATTGAAAATAAATGTTCTAAGATAAGAATTATGATGTCCGCTCAACTTCATTTGAAATTTCAATAAAGTATCAAAAGTCAAAAGGCCTTTTGATTTCATAGTTATTTTTTATTTGTCTTGTCATTGGTATATTTTTGTAATCATCGCAGACCTCTCAGTTTGTATAGGATCAATATTTTACAGGTTCACCTCCTTATACTTCCAAATCTTGAGCCATATCTGGGGCTTTTGGAACCTGAAATGCTTCTTGCTAATCAAAAGAATGAGATGAAGCGGCATGAAGCCTGGCGCGTTTATGGAGCCTTGCTGGTGAGTTCTTTCTATTAAGATCTTGTGCAACTTTATTACCAGAGTATTATGTGGAAACTGATGGAATGGGATTTTTGACATGATATGTTTTCCAGCGTGCGGTTGGTCAATGCATTTATGATCATGTCAAGATTTTTCCTCCTTTGCCTAGTATGCCTGCGGGTTCTATCTTGCGGACGAATGCGAGAGTTATCACCACCACATTTCTGAGTAAGATCTTGCAACTTTATTTAAATCAAAGTACAAGATGCAAAAAGACTATCAACTTCTGCTCTGGTTTTCACTAAGCTGAAATTTTTTATTCCTAGGACTTGTAAATTTTTAGCTCTACCTCTGTCTGGGATTTTTAGTTTTGAGTTTTATGCCAATATAGATCCGTCCTCATTAATATGCTGTGAAATATATGATTAGTGAAACGGTGAAAGAATGAAACAGAAATTCTTGCCATTAGGGGAACTAAAATGTAAATACTTGATATATGTCCTAATTGTTGCTTGTGTAGCTGACCAAATTTCCCTAGTAAAAGAGTGATTTTTTGGCAAATCCTTTATATCTTAAATTTTTTGGAACTTTATAGTTCTTGAGTAAGTACACATTATTTAAAGATTTCACATTTACATTGATCTTTTTGTTTTGCATGTGTAATCTTAGACAAACGCAAGGAAAATGCCGACCACTTAGAAGGGCAGCCTCCCCTTAAGAAGATGGTAATGGATAGTCCAATGGGTGTCATGCCAACTAATTCATCTGCATCACACATGGAAGGAGCAGTTAATCCCGCTTCTTCCAGCAATTCCAGTCTGATTTTGCCGACATCTTCTCAACCATTGCAAAACGAAACCATTCCAGGCAGCAATAGTAGGAAAGGCAAGTATGATGATCAAATTCTTAAAAGGTCAGCTGTCTTATCTCAAGTCTGGAAGGAGGATCTTAAATCTGGAAAGTTGTTAACATCCATGTTAGATTTGTTTGGTGAAAGTATGTTATGCTTCATTCCTGCTCCTGAATTGTCCATGTTCTTGTAATAACTATCATC GCCACAATTACCTCCAAAGCAAAAATCtatggtcaaacgcagcaaaagcattactatctgaaatctggtttgaatggaatcaaagagtcttcgacgacaagccttgcgactgagcagcttgcttcgattcattgcgtctccttgcctcatcttggtaaattgagagatcttgagaagagcttttggaatggactgtttttatacaactacttggggATTGCCCTTTCAATGTTTTGCAGGTTTGGTCATGTTTACAACACTCTTCAGACAAAGCTCACAAAAACTCTTCTCAATGCATTTTTAGACCCCAAACGGGCTTTGACTCAACATTATGGTGCAATTCAAGGATTAGCAGCCTTGGGGATGAATGTGGTTCACCTCCTTATACTTCCAAATCTTGAGCCATATCTGGGGCTTTTGGAACCTGAAATGCTTCTTGCTAATCAAAAGAATGAGATGAAGCGGCATGAAGCCTGGCGCGTTTATGGAGCCTTGCTGCGTGCGGTTGGTCAATGCATTTATGATCATGTCAAGATTTTTCCTCCTTTGCCTAGTATGCCTGCGGGTTCTATCTTGCGGACGAATGCGAGAGTTATCACCACCACATTTCTGAACAAACGCAAGGAAAATGCCGACCACTTAGAAGGGCAGCCTCCCCTTAAGAAGATGGTAATGGATAGTCCAATGGGTGTCATGCCAACTAATTCATCTGCATCACACATGGAAGGAGCAGTTAATCCCGCTTCTTCCAGCAATTCCAGTCTGATTTTGCCGACATCTTCTCAACCATTGCAAAACGAAACCATTCCAGGCAGCAATAGTAGGAAAGGCAAGTATGATGATCAAATTCTTAAAAGGTCAGCTGTCTTATCTCAAGTCTGGAAGGAGGATCTTAAATCTGGAAAGTTGTTAACATCCATGTTAGATTTGTTTGGTGAAAGTATGTTATGCTTCATTCCTGCTCCTGAATTGTCCATGTTCTTGTAATAACTATCATC ATGTTTTGCAGGTTTGGTCATGTTTACAACACTCTTCAGACAAAGCTCACAAAAACTCTTCTCAATGCATTTTTAGACCCCAAACGGGCTTTGACTCAACATTATGGTGCAATTCAAGGATTAGCAGCCTTGGGGATGAATGTGGTTCACCTCCTTATACTTCCAAATCTTGAGCCATATCTGGGGCTTTTGGAACCTGAAATGCTTCTTGCTAATCAAAAGAATGAGATGAAGCGGCATGAAGCCTGGCGCGTTTATGGAGCCTTGCTGCGTGCGGTTGGTCAATGCATTTATGATCATGTCAAGATTTTTCCTCCTTTGCCTAGTATGCCTGCGGGTTCTATCTTGCGGACGAATGCGAGAGTTATCACCACCACATTTCTGAACAAACGCAAGGAAAATGCCGACCACTTAGAAGGGCAGCCTCCCCTTAAGAAGATGGTAATGGATAGTCCAATGGGTGTCATGCCAACTAATTCATCTGCATCACACATGGAAGGAGCAGTTAATCCCGCTTCTTCCAGCAATTCCAGTCTGATTTTGCCGACATCTTCTCAACCATTGCAAAACGAAACCATTCCAGGCAGCAATAGTAGGAAAGGCAAGTATGATGATCAAATTCTTAAAAGGTCAGCTGTCTTATCTCAAGTCTGGAAGGAGGATCTTAAATCTGGAAAGTTGTTAACATCCATGTTAGATTTGTTTGGTGAAAGTATGTTATGCTTCATTCCTGCTCCTGAATTGTCCATGTTCTTGTAA MFCRFGHVYNTLQTKLTKTLLNAFLDPKRALTQHYGAIQGLAALGMNVVHLLILPNLEPYLGLLEPEMLLANQKNEMKRHEAWRVYGALLRAVGQCIYDHVKIFPPLPSMPAGSILRTNARVITTTFLNKRKENADHLEGQPPLKKMVMDSPMGVMPTNSSASHMEGAVNPASSSNSSLILPTSSQPLQNETIPGSNSRKGKYDDQILKRSAVLSQVWKEDLKSGKLLTSMLDLFGESMLCFIPAPELSMFL*
BLAST of Cucsa.184900 vs. Swiss-Prot
Match: TAF6_ARATH (Transcription initiation factor TFIID subunit 6 OS=Arabidopsis thaliana GN=TAF6 PE=1 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.9e-58 Identity = 131/259 (50.58%), Postives = 173/259 (66.80%), Query Frame = 1
BLAST of Cucsa.184900 vs. Swiss-Prot
Match: TAF6B_ARATH (Transcription initiation factor TFIID subunit 6b OS=Arabidopsis thaliana GN=TAF6B PE=1 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 8.7e-43 Identity = 103/249 (41.37%), Postives = 148/249 (59.44%), Query Frame = 1
BLAST of Cucsa.184900 vs. Swiss-Prot
Match: TAF6_SCHPO (Transcription initiation factor TFIID subunit 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=taf6 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.3e-09 Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = 1
BLAST of Cucsa.184900 vs. TrEMBL
Match: A0A0A0KEI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G418910 PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 6.6e-138 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1
BLAST of Cucsa.184900 vs. TrEMBL
Match: A0A0A0K1B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037630 PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 7.1e-116 Identity = 213/250 (85.20%), Postives = 228/250 (91.20%), Query Frame = 1
BLAST of Cucsa.184900 vs. TrEMBL
Match: M5WT17_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003876mg PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.6e-80 Identity = 156/250 (62.40%), Postives = 189/250 (75.60%), Query Frame = 1
BLAST of Cucsa.184900 vs. TrEMBL
Match: D7TE54_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g00300 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 2.0e-78 Identity = 158/250 (63.20%), Postives = 189/250 (75.60%), Query Frame = 1
BLAST of Cucsa.184900 vs. TrEMBL
Match: A0A067EWU3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009148mg PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76 Identity = 156/252 (61.90%), Postives = 188/252 (74.60%), Query Frame = 1
BLAST of Cucsa.184900 vs. TAIR10
Match: AT1G04950.1 (AT1G04950.1 TATA BOX ASSOCIATED FACTOR II 59) HSP 1 Score: 227.3 bits (578), Expect = 1.1e-59 Identity = 131/259 (50.58%), Postives = 173/259 (66.80%), Query Frame = 1
BLAST of Cucsa.184900 vs. TAIR10
Match: AT1G54360.2 (AT1G54360.2 TBP-ASSOCIATED FACTOR 6B) HSP 1 Score: 175.3 bits (443), Expect = 4.9e-44 Identity = 103/249 (41.37%), Postives = 148/249 (59.44%), Query Frame = 1
BLAST of Cucsa.184900 vs. NCBI nr
Match: gi|778716397|ref|XP_004140111.2| (PREDICTED: transcription initiation factor TFIID subunit 6 [Cucumis sativus]) HSP 1 Score: 498.0 bits (1281), Expect = 9.4e-138 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1
BLAST of Cucsa.184900 vs. NCBI nr
Match: gi|659097009|ref|XP_008449395.1| (PREDICTED: transcription initiation factor TFIID subunit 6-like [Cucumis melo]) HSP 1 Score: 474.2 bits (1219), Expect = 1.5e-130 Identity = 238/249 (95.58%), Postives = 240/249 (96.39%), Query Frame = 1
BLAST of Cucsa.184900 vs. NCBI nr
Match: gi|659110962|ref|XP_008455502.1| (PREDICTED: transcription initiation factor TFIID subunit 6-like [Cucumis melo]) HSP 1 Score: 433.3 bits (1113), Expect = 2.8e-118 Identity = 216/250 (86.40%), Postives = 233/250 (93.20%), Query Frame = 1
BLAST of Cucsa.184900 vs. NCBI nr
Match: gi|778723605|ref|XP_004144526.2| (PREDICTED: transcription initiation factor TFIID subunit 6 [Cucumis sativus]) HSP 1 Score: 424.9 bits (1091), Expect = 1.0e-115 Identity = 213/250 (85.20%), Postives = 228/250 (91.20%), Query Frame = 1
BLAST of Cucsa.184900 vs. NCBI nr
Match: gi|595938187|ref|XP_007215640.1| (hypothetical protein PRUPE_ppa003876mg [Prunus persica]) HSP 1 Score: 307.4 bits (786), Expect = 2.4e-80 Identity = 156/250 (62.40%), Postives = 189/250 (75.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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