Cucsa.178370 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.178370
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Peroxisome biogenesis protein 12
Location	scaffold01227 : 548604 .. 557903 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTCGATGGTTTGTGAGAACAGAGTCGGATTTCGGTAGAAGAGGTCTGTTAATTTGATCGGAAGCATTCCCTTCCAATTTGAGAACCATGTTGTTCCAGGTTGGAGGTCAAGGGACTCGTCCCACTTTCTTCGAAATGGCCGCTGCTCAGCAGCTCCCTGCCAGTCTTCGTGCCGCTCTCACTTACTCTATCGGCGTAACAATCTCTTTCTCTCTCTTTTAAACCATATCTTCGTTCCTTCAACACTCACCCGCCATTGCTGTGCCAATTTCCTTTTTGTGCTCTATTCTTGCCGAATTGGGACTTCTTTTTTCATTGTTATTAGTTATTTCAGCTTTTGGATTGTTGTTTCGTTCTATACATTCGAGAAATGGTGGGGTTCTATTTGTTGCTAAATGGGTCATTGTATTTATTGATAACATTTTTTAAAAATCTTAATTCGGAATATGTTATCATGTGCTTTAGGCTCTTGGCGAAGGACCTATTTCTTGTGTCAAAAGTAATTTTTGATCGAGGATATCTTGTTTCTTCAACTATTTTAACTGTTTTTTACCATCAATTATGTTCGATAAGAAACTATTTTCTAGAAAGTATGGACCTATGAAAAGGAGAGGAGGAAAGCTTATGCTAAGTTATGTTACAAACAAGTCCTTTTAAGGAGAATCCACCTGCCTAAGATATACTATCCTTTGAGTTACCCTAGTGCCAAATATAGTAGGAACTGGTGCTTGCTTGTGAGAATAGTAGGGGAGTGCACAACTTGACCTAGGCACTCTGATGTTGTGCACATTATGCATCCTTATATGGCTGTATGCTGTTTCCTCACTGTATTACATTTTTGTTGTTTAGTCCTAATGCTTGAAATTCTTGTGGATTGGTAAAATAATTTCAGGTCTTAGCTCTAAGAAGACCATTCTTTCACAAGGTGTTAGACTATGAAGATGAGTTCTTTTCTTTGCTAATGCTAGTTCTCGAAACGCATAGCTTACGAACTACAGGTGAATGACAATTGTTTTTGTAAAGCATACATTTAAATTTGAACATTACTGTTCCAGTCTCTAGTATTTAATTTTGTTTTATTTTGTTTGTGCGTTCTAAGTTTGAACATTACTGTTGCACTCACAGATATAAAAAAATATTGTTCTGTATGTTTCAGATGCTTCTTTTTCTGAATCCTTATATGGCTTAAGAAGAAGAGCTGTAAATGTACAAGTAAAGAAGGAAGATGCTCGTTCAGTCTCTGGTGATGGTATTCAACATAGAGGATTAGAAAAACATCAAAAAGTTCTTTCTGTTGCTTTCTTGGTAAGATCTTATTCTCGTTCATTTGAAAAAGATACTGACGATTCAACCATTATTCCATTTCTTTTGGAGGTTTTGACATTTAGTTCACCCTGCGTATCTCAGAAAATTTTATGTTTTGTACACTAGTCTCTCTCTCTATGTAAACACACATGGACATACATATTCGTATATAACCTACCAGGTTTATGAGTATGTTATTCATTACCCATTTTATCTCAATCTTTTGGCTTATTTCTTCTCTCTCTAAACAAGGCCATTGACACTAAATATGACATACGAAAGATTGAAGTTTGGTAGCATATTGCTCCATAGAAGTTCAGAATAGTTTTTTTCTTTTCTTTTTTGCCCCTTTTCTGTATAATAAGTTTTCTTGAACATACGATACAAGAAAAAAACAGTATTTCATTTGGATTCAAACCCAGACTTCCCTGCAACCTCTGCACCTTGAGTGATTAGCAAATTGAATTTTCAGGTTGTATTGCCTTATTTCAAATCAAAGTTGCACTCAATTTACAATAAAGAAAGGGAAGTCAGGCTTCAAGCAAGTTTATGGGGTGATGATAATGAGGGGTTTAATGATGCTGAAATTTATGAAGTAAGAGGTGACAATGTTGTTCCTACTAGAACTTTGGGAGTTGAAACATCGGTAAGAGCACGGGTGATGAAGAAATTTCAGAAAATTGTTGGTTCTTGTTACCCTTGGCTTCATGCAAGTAGTGAAGGTAATAAATACACTGGCTCATCAAATATTTATTGTATATTTTTATTTTAATAAATATTTGGAGGTTTGTGATCCTATCGATTATATGGGTCAGTTTTAAATTTTAAATCTGATAAATAACTAAGTGGTTTGATTTGCAAAAAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGGATTTATTATTACTTTGATTCATCTATGGGGTGGAAGATCAAACTCTCAAAGGTGTGGAACGTTGTTTTGTTGTCAACTATTCTTTATTAAGTCTCTTTTTGCTGCCCTTTTAGAAGATTCATCTGTTCTCTCTTCACCTAGTTTTCAAAGCCCCTTTGGAAGCTCAAGATGCCTAAGGTTTTCTTGCAGCCTGCTATCCTGGAGGACTCATCAGAATAAAAAAGTTCAGAGACCCAATCGCTCCATGATCCAAATTGGTGACCTTTATGCAGATGTGATAAGAAGGCATTTGAATCATTTGCTTTGCTGTTGCCTATTTGTTTTCCCCTTTGGTTCAGGCTTCTGGGAGTGTTTGATATGAGTTGGGATTCCCATTACTTGAAGAAAATACATTCTGGATACTGGATGGATAGGTTACGGTCATGAAGAAATAGAAAGAGTTTATTAAAATAATGAGAAAACTAAAGATCAGCTTTGGTTTGATTAGATTTCTTTTGGATACTTCATTCAACCAATGAAATGTTTCTTACATATAAAAAACCTTGGTTTGATATGATTTCTTGTCTTCTTGGGCCTTTAAGTCTCTCTCTTTCTAAGCAAGGTGAGGAAGAAGAACTGGCTAATGTGTTTATGTTCCTAGAAGTAATTTGAAGAAACGTGTAGTTAATCAACCAGAAGTAACCATTTGGGCGAAGTACATTTTAGTCTTAGGGATTCTAGGAATGGTTCTGTAGGTTTGTTGGACCATTAGTTGACTCACGAATGAAGTGGCACTTAAGTTGTTAACAAATTTATTAATTCAATCATTTCTTTTGTTGAGTTGGTTTTTTTATCAATTTAATAATATTCTTATCCATTTTCTTCCTTTTCTTCTTTTCCACTTTTTTTTTGGTGAAATTGCTTCTGCGTATCGCCCCTCTCCTCCCTCATCCCTGTCATTAGTTTGTCACTGAAGGTATTTGGAACAAAGAAAATTCAAACCAGATGGGGAATTTTCTTCGTACTACCATGAATGAGATGAAAAGAAATGCATGTTAAACTTCTGGTTGATAATCTATTATGGAAGTACTTTGTTTCATATCAGAGAAAAAAAGTGGCTTGTACTTGGTATTTGGTTCTGTGATGACACTTCTTGAAGTTTTATTTGGAATATTACGATTATCTATATTTCTTAGTCATTTTTTATAAACTATCCAGAATGTCATTGTTTAAGGACTGTCTTTATGTTGATGCAGGTCTATCGTTTGCTTACCAACTGTTATATTTGTTGGATGCTACTGGATTCTATTCACTGGGACTGCAGGTCATTGGAGTTCATGTCTGTCGGGCTACAGGACAAGAGCTGGTAATTTTTTAAATTCTTTAGTGAAATGCTTTAAGGTGGTAACTCCTTTTATTATTGATAGAATAATCTACTTTATTTCATATAGATCTTTGATTCCCTCCTCTAGAGAGCTGTACACAGCAGAATCAGAAATGCTTTATAATTCAATTATTTGATACTGCTGTTTTTTATTGAACTTTGTCAACTACTGGAATTTGACTTTATAATTTATCTAAACTTTGAGCACAATAGTTGTTGCATGTCAAATGTTTGTTCTGTTATTAGATTAAATGTATCACACAATGGTATCCTTTTCACTTCTTGGTTATCAATAATATTTAAAGATTATTTTTTTCCCATTCTTCTTTCTATTCATTGTTTTTGTTACCCTTTTGTGGCATCAAGGTAGATGGACACATCATCTAGAATTTCAAAGATACGAAGCCATGAACGTGAGCGACTACGTGGCCCTCCTTGGTTGAAGGTATAACTTCTTTGATAATTATTGGGGCATCTCATATCATTTTTATTTTTGGAATCGCCCAACCCTTAGGAGCTTACAAAAGATTTATTGGTAAGATTCAGGTTGAAAGTGGAGTATATTGGTTAAGGAAAAACTAAAAGAGATTAATTAGAAGAGAAAATAAACCTTTGAGAAGTTACTGGGCTCTCGTCAAGATGGCCCCTAAGAATTAGACATTCAGCTAAGGGTTTGAGACTTGAATCAAGGGAAGAAGAATAATATTGTTGTATTTCTTCTTTCTCATCTAAAATAAATACAAGTACCTCCAATGTAGGAAAAAAAACCACCAACCGAGTAAGAAAAGAAATATTACAAATATAAAAATGAATAAAAGGAGAAGAAGAAAGAATAACACTTGTGTATGTGGAAAACCATAGATCAGGGAGAAAAAACCATGATATGAGTCTTTGTATATTTCTAGATTTCAAAAGAATACAAGGGATGAAATATATAGGCCATAATGGGCCTTGGCAAAAAAGGAAATAAACAAGGGTATTAAGATTACACAAATATCCTTAGCACAATTATTTTCAACAAGTATAAATAATAAATAGGAAAATGTACCTTTTTGGTTCTTAGATCTTGGGTTCAATTTTTATTTGATCCCTAGGCTGCAAAATGTTATATTGCTAGTCCTTAAATTTTGGGTTGACTTCATTTTAGTCCCTAGGTTTATAAATGTTGTATTTTATCATTGAATTTTGAGTTTTGTTTCAATTTGACAATGAAGCAGACACGTGCAAAATGTTAAAAGTGTCAATGTCGGACACATATCGTACATGGATACATCTGGACGCATTTCCGACACATGTTAGACATGCAAAAATCTGTACCCTCTTTTATTTATTACTATTTCAATTTTCGACACGTGACGACACATATGGACACACCACGACACGCTAGACACAAAAAATCCCAAACCTATCAAACAACTTCAACGGCGTTAAAGAGGGAGATCAAACAACTTTAATGGCATGTAGAGAGGGATGATCGGCGTCGTCAAGTTTAAGAATTAGACATTAAGCTCATGTGTTGATATTTCCATTACATTGTAGAAAAATGCTTGAAACACAAAAGATAAGCATTAAACTGCAAATAATACTAGTATAGTATAAATAACAGACATATTCACTTATATGAAAATAATAAGATGTTTATTTCATAATTTATTTTTTAAAATTTTCCAAAAATATCCATTGAAATTGATATTTTATTGACATTTCCATCAAATTTAATACCTCGATATCTCTATTGACATCGGTATTTTAAACCCTAAACCTTGATCTTTCCTAAAGAGGAATGAAATTCATACCCTCCCACAAGTTAGTTTATAGTTATCTTCCATGGTCACCTTGTTGATAAGTTTAACAATACTTAGATGAGTGTATGCTAGAATATCAATATAAATCAAAATATATAAGTAGATCATTCCGGTCACTGACTAAGCAGTGGGAAGAGAGATGGCCCGGAAAAGAAAGTGTTGACTACATTTGACGACCTCCTGAACAAAGGAATCATAGTTTCTCATGTATATACATATAGGTTTCTTATGTATATAGTTTAATAATATAACTTTTTGAGGAATATTCTATCTCCAAATGCTTTGAAGGTGTTACTATCTTTTGACTATTTCTCTATTGGTTATAAAGAAGTCGACAGACTTACAGGTGTAATTTATGGAGTTGTTCAGGTCCATGTTACTTATCAGCTAGGTTGGTCAAACTCCAAATTGCCCTATTTCCACATTTCAGCACAGCAGTCAAAGGAGTGGGGGCATACTTAGTTTTGTGAGACTGAGAGTGGGTTTAGTGTAGGAATTCTAACCATCCGACAGTGGACAGGTGCAGGGGACACCCCAAACTTGGTCTTACTCCATTTTTCTATTTCATTTTCTAGACAGTGTGCAGATAGTGTAAGTGCACACGGCGCACACAATCGTGTGCGTAGTGATGACCATCCATGAGCAAAGCCAGGATTGCCCTTCAGCATGGATGGGTGGGATGCACGAATTTGATGAAACTTCGCCCACCTCATCACACTCTGGCGCTAATTTGCACGCACTTGGTTCTCTGGGTGGGCTTCCCAGCTGTGGGTGGCTGACTGTGCATCTGTGGCTTCCATCTTCTTGAGAGGTTTCTTTGAGCAAGACCTTGGAAATTATGAAGGATACAGCATCTCGCTCTAGAGGTTGGCCTTCTTCCAACCATTGTAATTGTGAATTGCCACTCTTGTGCCATCAACGATCCCTTCTAGACCTGGCTAGGGTCAATCTTAGTTTTCTGTTCCTTTCTGGTCTCTTGATCTGACCTGATTCCTTCATGGAGTTACTCAAGATCTTCATGAGTTGAGGGTCTAACAAGCAATCCCAAGGGTTGTTATGAACTGAATATTGGGACTCCTTGACTGAGAGTACTTAGCCAAGATTCAAAGACTTGCTCCATACTTAAAATTTTGTGACTCATAAAATCTTTGGGATCTTGGCTATGTGTAACTGTTTAAGACTTTACAGGCTGAAAGAAGGATGGTGTGATTCACTTATTGCTTCTGAAAGAATTATACTAGTTCTTCTATATTGTCTTTTGAATCTTGGCAGATTGGTTGACTCCTTTTGATGGCTCATCCGATGAGAGAGTTACTTTGTTTTGTTAGCTATTTGGCAACTTGTTAATACATAAAAATTTCAGCTGCATTTATTTAACGCTGAATTTTGTCATTGTTAGTTTAACAGTGGTCCTTTTCAAGTTTTTGAGCTATTTTCATTTTCTACTCTTATTCAATATATCTTAAAGTATACCTCATTCATGTGAAAACAGGCAATACAAGGAGGCCTCCTTACTTGTTTGTACACGATGCTAGATTATGCACAGACCGGATTGATTGCAGCCGTATTTTTCTTCAAAGTGAGTCCTTGAGCAAATCCAATATCGCATCTCTTGCTTTTAAATATCTTCTTTAAAGTATAGTAATGACAATGCCTTACTTATATAAAAATAATGTATAACTTTGAACTTTTATTAATACAATAAAATAGTTAATTTCAGAGCAAATTGCAAAAGCCACCCCAAAATATGGTGGTAGTTGCCATTATACCTTTAAACGTTCAAAATTAATCATTGAGCTCTCGAACTTATCTAAATTTTAAAATTGAACCATCGAACTTACATAATTATATAAATTGAGATTCAATTTTTATAATTTGTGGGTCTAGTTTTTACAATTGTTGTATGTTCAAGGGTCCAATTTTAACACTTTTAGAAGTTTAAGGGTGTAATTGCAAACCACCGCTATACTTTAGGGGTGATCTTTGCAGTTTGCCCTTATTTTTTCATCTGCTTTTTCGATCTAATTACATACATTATACAAAAGTGATTTTGGATCTTTTTATTTGGATCACTTTTACATCACATAATGACTTTATGACGTAATCTGTAATCTGATTAGATGATGGAGTGGTGGTACCAATCTGCTGAGGAACGAATGTCTGCACCAACTGTATACCCCCCACCACCTCCTCCTCCACCTCCAAAGGTGAAATACTTTTTCCTTAAATGAACTCTATATAACATGGTTTTCTGCCCTTTTATGATAATATATATTTGTATTTATGTGTGAGGGTGTGATGTATGTATACATCTATATAATGTGCATGAAGTTGTATTACCCATTCAAATACAAGCTGTGTTGATATAAACAGGTAGCCAAGGAAGGGATTCCACTGCCGCCCAACAGAACAATTTGCCCTTTGTGCTCAGATAAACGAGCAAATCCATCAGTTGTCACTGTCTCTGGCTTTGTCTTTTGTTACACTTGCATCTTCAAGTATATTTCACAAGTAAGCCCTTAACTATTGTCAACTCTAGACATCTATTTAACTTCTTTCATTCTCTTTTTCCTTTCCATGTTGGAATCTTGTTTGAGGAGTAATTTGACTGCTGAGTGAGGTAGGAAATTGAGTTCTTTAGGAGTTTATCCATTTTTGCATGCATTCTCCTGTGGATTTGAGATACTAGCTAGGTTACCCCACCCTTAACCAGAGAGCGTACCAATGACGTTGTAGCACCAATAATAATTAGGAGTTCTTATGGGAGGTATTGGTTGTGGGAATTGATGAAGACAATTAGTATGATTAGTCTATTTAGTTGTGTTCTTAATCTAGATTAATTAGTGTTTAATTATAATTAATTAGTTAATTATATAATTCCTTGTAAGGCTATAAATAATTAAATTTAAGCTTCTAATGGGAGCTTTTAATTATATTTTGATGTTCTTTAAGAGAGTTCTCTCTTTAGAAAGAGATGAATTTCCTTTTGTTGGCCATGGATTTGGTCTAATACTTCAATCCGCTGCCTGAGAAATTAGTTGGCTAAAAATTTCAGTTAGTAATGCACTAAGCCAAAAAAGAAAAAAAAAGATTTATAAGTATAGTTTTAAAAATAAAACACATGGAACAAAGTTGTTATCAAATGAGACTTGTTGAACTGTACATTATTGGTGTTTTGGGGAAGTTGTAATCTTGTGTTTGTTTATGTTTGCACTGAACCTGAACCAGTACAAGCGCTGCCCAATCACATTAATGCCTGCAAATGTCGATCACGTTAGGAGGCTCTTTCATGATATGTGAAGAACTTGAGGGACACAATCATGCAAAGGATTTAGTGGACTTGCGATTGTTCATTATGTAGTTTATAATCACAGTTATTGGTAACATTATGGTGTTTAGGATTATAATATATCCAAGGTTTCAAATTTTTAGAAATATCAATAAATATATGATAGATGGGTAT

mRNA sequence

CATTCGATGGTTTGTGAGAACAGAGTCGGATTTCGGTAGAAGAGGTCTGTTAATTTGATCGGAAGCATTCCCTTCCAATTTGAGAACCATGTTGTTCCAGGTTGGAGGTCAAGGGACTCGTCCCACTTTCTTCGAAATGGCCGCTGCTCAGCAGCTCCCTGCCAGTCTTCGTGCCGCTCTCACTTACTCTATCGGCGTCTTAGCTCTAAGAAGACCATTCTTTCACAAGGTGTTAGACTATGAAGATGAGTTCTTTTCTTTGCTAATGCTAGTTCTCGAAACGCATAGCTTACGAACTACAGATGCTTCTTTTTCTGAATCCTTATATGGCTTAAGAAGAAGAGCTGTAAATGTACAAGTAAAGAAGGAAGATGCTCGTTCAGTCTCTGGTGATGGTATTCAACATAGAGGATTAGAAAAACATCAAAAAGTTCTTTCTGTTGCTTTCTTGGTTGTATTGCCTTATTTCAAATCAAAGTTGCACTCAATTTACAATAAAGAAAGGGAAGTCAGGCTTCAAGCAAGTTTATGGGGTGATGATAATGAGGGGTTTAATGATGCTGAAATTTATGAAGTAAGAGGTGACAATGTTGTTCCTACTAGAACTTTGGGAGTTGAAACATCGGTAAGAGCACGGGTGATGAAGAAATTTCAGAAAATTGTTGGTTCTTGTTACCCTTGGCTTCATGCAAGTAGTGAAGGTCTATCGTTTGCTTACCAACTGTTATATTTGTTGGATGCTACTGGATTCTATTCACTGGGACTGCAGGTCATTGGAGTTCATGTCTGTCGGGCTACAGGACAAGAGCTGATGGACACATCATCTAGAATTTCAAAGATACGAAGCCATGAACGTGAGCGACTACGTGGCCCTCCTTGGTTGAAGGCAATACAAGGAGGCCTCCTTACTTGTTTGTACACGATGCTAGATTATGCACAGACCGGATTGATTGCAGCCGTATTTTTCTTCAAAATGATGGAGTGGTGGTACCAATCTGCTGAGGAACGAATGTCTGCACCAACTGTATACCCCCCACCACCTCCTCCTCCACCTCCAAAGGTAGCCAAGGAAGGGATTCCACTGCCGCCCAACAGAACAATTTGCCCTTTGTGCTCAGATAAACGAGCAAATCCATCAGTTGTCACTGTCTCTGGCTTTGTCTTTTGTTACACTTGCATCTTCAAGTATATTTCACAATACAAGCGCTGCCCAATCACATTAATGCCTGCAAATGTCGATCACGTTAGGAGGCTCTTTCATGATATGTGAAGAACTTGAGGGACACAATCATGCAAAGGATTTAGTGGACTTGCGATTGTTCATTATGTAGTTTATAATCACAGTTATTGGTAACATTATGGTGTTTAGGATTATAATATATCCAAGGTTTCAAATTTTTAGAAATATCAATAAATATATGATAGATGGGTAT

Coding sequence (CDS)

ATGTTGTTCCAGGTTGGAGGTCAAGGGACTCGTCCCACTTTCTTCGAAATGGCCGCTGCTCAGCAGCTCCCTGCCAGTCTTCGTGCCGCTCTCACTTACTCTATCGGCGTCTTAGCTCTAAGAAGACCATTCTTTCACAAGGTGTTAGACTATGAAGATGAGTTCTTTTCTTTGCTAATGCTAGTTCTCGAAACGCATAGCTTACGAACTACAGATGCTTCTTTTTCTGAATCCTTATATGGCTTAAGAAGAAGAGCTGTAAATGTACAAGTAAAGAAGGAAGATGCTCGTTCAGTCTCTGGTGATGGTATTCAACATAGAGGATTAGAAAAACATCAAAAAGTTCTTTCTGTTGCTTTCTTGGTTGTATTGCCTTATTTCAAATCAAAGTTGCACTCAATTTACAATAAAGAAAGGGAAGTCAGGCTTCAAGCAAGTTTATGGGGTGATGATAATGAGGGGTTTAATGATGCTGAAATTTATGAAGTAAGAGGTGACAATGTTGTTCCTACTAGAACTTTGGGAGTTGAAACATCGGTAAGAGCACGGGTGATGAAGAAATTTCAGAAAATTGTTGGTTCTTGTTACCCTTGGCTTCATGCAAGTAGTGAAGGTCTATCGTTTGCTTACCAACTGTTATATTTGTTGGATGCTACTGGATTCTATTCACTGGGACTGCAGGTCATTGGAGTTCATGTCTGTCGGGCTACAGGACAAGAGCTGATGGACACATCATCTAGAATTTCAAAGATACGAAGCCATGAACGTGAGCGACTACGTGGCCCTCCTTGGTTGAAGGCAATACAAGGAGGCCTCCTTACTTGTTTGTACACGATGCTAGATTATGCACAGACCGGATTGATTGCAGCCGTATTTTTCTTCAAAATGATGGAGTGGTGGTACCAATCTGCTGAGGAACGAATGTCTGCACCAACTGTATACCCCCCACCACCTCCTCCTCCACCTCCAAAGGTAGCCAAGGAAGGGATTCCACTGCCGCCCAACAGAACAATTTGCCCTTTGTGCTCAGATAAACGAGCAAATCCATCAGTTGTCACTGTCTCTGGCTTTGTCTTTTGTTACACTTGCATCTTCAAGTATATTTCACAATACAAGCGCTGCCCAATCACATTAATGCCTGCAAATGTCGATCACGTTAGGAGGCTCTTTCATGATATGTGA

Protein sequence

MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLMLVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAFLVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSVRARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQELMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFCYTCIFKYISQYKRCPITLMPANVDHVRRLFHDM*

Homology

[Close]

BLAST of Cucsa.178370 vs. Swiss-Prot
Match: PEX12_ARATH (Peroxisome biogenesis protein 12 OS=Arabidopsis thaliana GN=PEX12 PE=1 SV=2)

HSP 1 Score: 612.5 bits (1578), Expect = 3.3e-174
Identity = 288/394 (73.10%), Postives = 342/394 (86.80%), Query Frame = 1


Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60
           MLFQVGG+GTRPTFFEMAAAQQLPASLRAALTYS+GV ALRR F HK+LDYEDEFF+ LM
Sbjct: 1   MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM 60

Query: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120
           L+LE HSLRTTD SF+ESLYGLRR++  ++++K+ AR  S + +QH GLEK Q++LSV F
Sbjct: 61  LILEGHSLRTTDGSFAESLYGLRRKSARLRLRKDSARKDSSEEVQHSGLEKRQRILSVVF 120

Query: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTR--TLGVET 180
           LVVLPYFKSKLH+IYNKERE RL+ SLWG +++GF++A+ +   GD+ + +R  +   E 
Sbjct: 121 LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFF--TGDDSIVSREPSGNEEL 180

Query: 181 SVRARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATG 240
           SVR ++  K +K +  CYPW+HASSEGLSF YQLLYLLDATGFYSLGLQ +G+ VCRATG
Sbjct: 181 SVRVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATG 240

Query: 241 QELMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMME 300
           QELMDTSSRISKIR+HERERLRGPPWLK +QG LL+C Y +LDYAQTGLIAAVF FKMME
Sbjct: 241 QELMDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMME 300

Query: 301 WWYQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFV 360
           WWYQSAEER+SAPTVYPPPPPPP PK+AKEGIPLPP+R++C LC  KRANPSVVTVSGFV
Sbjct: 301 WWYQSAEERLSAPTVYPPPPPPPAPKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFV 360

Query: 361 FCYTCIFKYISQYKRCPITLMPANVDHVRRLFHD 393
           FCY+C+FKY+S+YKRCP+TL+PA+VD +RRLF D
Sbjct: 361 FCYSCVFKYVSKYKRCPVTLIPASVDQIRRLFQD 392

[Close]

BLAST of Cucsa.178370 vs. Swiss-Prot
Match: PEX12_DICDI (Putative peroxisome assembly protein 12 OS=Dictyostelium discoideum GN=pex12 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.0e-38
Identity = 113/371 (30.46%), Postives = 179/371 (48.25%), Query Frame = 1


Query: 53  DEFFSLLMLVLETHS-------LRTTDASFSESLYGLRRR---AVNVQVKKEDARSVSGD 112
           D  FSLL  ++ T S         T      +S   +RR    A + Q  K+D  ++  D
Sbjct: 100 DTLFSLLKRLVVTPSNAGQGPETYTKSQILKKSFAMIRRNRAAASSSQQAKDDLNTMIQD 159

Query: 113 GIQHRGLEKHQKVLSVAFLVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYE 172
             +           S+ +LV++PYFK KL   Y KE +   +  L   DN   N+  I +
Sbjct: 160 SDRKE---------SLIYLVLIPYFKGKLDEYYKKESDPLAELGLVSSDNNNNNNDNIND 219

Query: 173 ---------------VRGDNVVPTRTLGVETSVR--------ARVMKKFQKIVGSCYPWL 232
                          V G+N        ++            ++ +KK + I    YP++
Sbjct: 220 QIQQLEEQIQQQQTIVNGNNNSNNNNKKLKIKFLILIRFLKGSKTLKKLKTIFLKVYPFI 279

Query: 233 HASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQELMDTSSRISKIRSHERERL 292
            A  E L F YQLLYL + T +Y+       + + R   +++      IS  R      +
Sbjct: 280 SAIYEALFFIYQLLYLYEYTNYYTPFFHFQNIQLKRLNHKDIESHRVVISNRRRDRINFV 339

Query: 293 RGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPP 352
           R  P   +    L++ L ++LDY++  L  +VF FK +EWWY  +E R+SAPT+ P P P
Sbjct: 340 RDWPG-SSFFVRLVSILDSILDYSKYILPLSVFIFKSLEWWY--SENRISAPTL-PIPTP 399

Query: 353 PPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFCYTCIFKYISQYKRCPITLM 391
           P P K A  G+ +P ++ +CPLC  +R NP++   SGFVFCY CIF Y++++ +CPIT +
Sbjct: 400 PTPSKRAPGGLEIPRDKRLCPLCLKERTNPTICG-SGFVFCYPCIFGYVNEHSKCPITFL 456

HSP 2 Score: 67.0 bits (162), Expect = 5.2e-10
Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 1


Query: 3  FQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLMLV 62
          F  G    RP+FFEM    Q+  S + AL Y   VL+ R P F  +++Y DE F  L+L+
Sbjct: 6  FDNGHDPNRPSFFEMLNQHQMMPSFKPALKYIFTVLSQRNPKFRYIVNYYDECFYSLLLL 65

Query: 63 LETHSLRTTDASFSESLYGLRR 85
          LE H L+  + SFSE+ Y L+R
Sbjct: 66 LEYHYLKYYEGSFSENFYNLKR 87

[Close]

BLAST of Cucsa.178370 vs. Swiss-Prot
Match: PEX12_HUMAN (Peroxisome assembly protein 12 OS=Homo sapiens GN=PEX12 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.2e-36
Identity = 114/391 (29.16%), Postives = 179/391 (45.78%), Query Frame = 1


Query: 11  RPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVL-DYEDEFFSLLMLVLETHSLR 70
           +P+ FE+ A   L  ++R AL + + VLA   P  +  L  + DE F+LL L+L+ H L 
Sbjct: 17  QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPTHYGFLWRWFDEIFTLLDLLLQQHYLS 76

Query: 71  TTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAFLVVLPYFKS 130
            T ASFSE+ YGL+R  +    K +   S         GL K Q             +KS
Sbjct: 77  RTSASFSENFYGLKRIVMGDTHKSQRLASA--------GLPKQQ------------LWKS 136

Query: 131 KLHSI---YNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSVRARVMK 190
            +  +   Y K +  +L +SL  +D    +                         +   K
Sbjct: 137 IMFLVLLPYLKVKLEKLVSSLREEDEYSIHPP-----------------------SSRWK 196

Query: 191 KFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQELMDTSS 250
           +F +   + YP+++ + EG     QL Y+L     +S  L++ GV + R T Q++     
Sbjct: 197 RFYRAFLAAYPFVNMAWEGWFLVQQLRYILGKAQHHSPLLRLAGVQLGRLTVQDIQALEH 256

Query: 251 RISKIRSHER------ERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 310
           + +K    ++      E++     LK   GG+   L        TGL   VFF + ++WW
Sbjct: 257 KPAKASMMQQPARSVSEKINSA--LKKAVGGVALSL-------STGLSVGVFFLQFLDWW 316

Query: 311 YQSA-EERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVF 370
           Y S  +E + + T  P PPPP       +   LP  +T+CPLC   R N +V+  SG+VF
Sbjct: 317 YSSENQETIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVF 355

Query: 371 CYTCIFKYISQYKRCPITLMPANVDHVRRLF 391
           CY C+F Y+  ++ CPIT  P  V H+ +L+
Sbjct: 377 CYRCVFHYVRSHQACPITGYPTEVQHLIKLY 355

[Close]

BLAST of Cucsa.178370 vs. Swiss-Prot
Match: PEX12_MOUSE (Peroxisome assembly protein 12 OS=Mus musculus GN=Pex12 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.5e-36
Identity = 111/391 (28.39%), Postives = 176/391 (45.01%), Query Frame = 1


Query: 11  RPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVL-DYEDEFFSLLMLVLETHSLR 70
           +P+ FE+ A   L  ++R AL + + VLA   P  +  L  + DE F+LL  +L+ H L 
Sbjct: 17  QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPAHYGFLWRWFDEIFTLLDFLLQQHYLS 76

Query: 71  TTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAFLVVLPYFKS 130
            T ASFSE  YGL+R                       G   H +  + A L     +KS
Sbjct: 77  RTSASFSEHFYGLKRIVA--------------------GSSPHLQRPASAGLPKEHLWKS 136

Query: 131 KLHSI---YNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSVRARVMK 190
            +  +   Y K +  +L +SL  +D    +                         +   K
Sbjct: 137 AMFLVLLPYLKVKLEKLASSLREEDEYSIHPP-----------------------SSRWK 196

Query: 191 KFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQELMDTSS 250
           +F +   + YP+++ + EG     QL Y+L     +S  L++ GV + R T Q++     
Sbjct: 197 RFYRAFLAAYPFVNMAWEGWFLTQQLRYILGKAEHHSPLLKLAGVRLARLTAQDMQAIKQ 256

Query: 251 RISKIRSHER------ERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 310
           R+ +  + +       E+++    LK   GG+   L        TGL   VFF + ++WW
Sbjct: 257 RLVEASAMQEPVRSVGEKIKSA--LKKAVGGVALSL-------STGLSVGVFFLQFLDWW 316

Query: 311 YQSA-EERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVF 370
           Y S  +E + + T  P PPPP       +   LP  +T+CPLC   R N +V+  SG+VF
Sbjct: 317 YSSENQEAIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVF 355

Query: 371 CYTCIFKYISQYKRCPITLMPANVDHVRRLF 391
           CY C+F Y+  ++ CPIT  P  V H+ +L+
Sbjct: 377 CYRCVFNYVRSHQACPITGYPTEVQHLIKLY 355

[Close]

BLAST of Cucsa.178370 vs. Swiss-Prot
Match: PEX12_CRILO (Peroxisome assembly protein 12 OS=Cricetulus longicaudatus GN=PEX12 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.5e-36
Identity = 116/396 (29.29%), Postives = 179/396 (45.20%), Query Frame = 1


Query: 11  RPTFFEMAAAQQLPASLRAALTYSIGVLALRRP----FFHKVLDYEDEFFSLLMLVLETH 70
           +P+ FE+ A   L  ++R AL + + VLA   P    FF +   + DE F+LL  +L+ H
Sbjct: 17  QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPAHYGFFWR---WFDEIFTLLDFLLQQH 76

Query: 71  SLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAFLVVLPY 130
            L  T ASFSE  YGL+R       + +   S         GL K               
Sbjct: 77  YLSRTSASFSEHFYGLKRIVAGSSQQPQRPASA--------GLPKEH------------L 136

Query: 131 FKSKLHSI---YNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSVRAR 190
           +KS +  +   Y K +  +L +SL  +D    +    +                      
Sbjct: 137 WKSTMFLVLLPYLKVKLEKLASSLREEDEYSIHPPSSH---------------------- 196

Query: 191 VMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQELMD 250
             K+F +   + YP+++ + EG     QL Y+L     +S  L++ GV + R T Q++  
Sbjct: 197 -WKRFYRAFLAAYPFVNMAWEGWFLTQQLRYILGKAEHHSPLLKLAGVRLGRLTAQDIQA 256

Query: 251 TSSRISK-------IRS-HERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFK 310
              R+S+       +RS  E+ +L     LK   GG+   L        TGL   VFF +
Sbjct: 257 IEHRLSEASVMQDPVRSVGEKIKLA----LKKAVGGIALSL-------STGLSVGVFFLQ 316

Query: 311 MMEWWYQSA-EERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTV 370
            ++WWY S  +E + + T  P PPPP       +   LP  +T+CPLC   R N +V+  
Sbjct: 317 FLDWWYSSENQETIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLAT 355

Query: 371 SGFVFCYTCIFKYISQYKRCPITLMPANVDHVRRLF 391
           SG+VFCY C+F Y+  ++ CPIT  P  V H+ +L+
Sbjct: 377 SGYVFCYRCVFNYVRSHQACPITGYPTEVQHLIKLY 355

[Close]

BLAST of Cucsa.178370 vs. TrEMBL
Match: A0A0A0LJL9_CUCSA (Peroxisome biogenesis protein 12 OS=Cucumis sativus GN=Csa_2G075430 PE=3 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 1.6e-228
Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 1


Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60
           MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60

Query: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120
           LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF
Sbjct: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120

Query: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV 180
           LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV
Sbjct: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV 180

Query: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240
           RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE
Sbjct: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240

Query: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300
           LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW
Sbjct: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300

Query: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360
           YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC
Sbjct: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360

Query: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 394
           YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM
Sbjct: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 393

[Close]

BLAST of Cucsa.178370 vs. TrEMBL
Match: B9I5P7_POPTR (Peroxisome biogenesis protein 12 OS=Populus trichocarpa GN=POPTR_0013s04500g PE=3 SV=1)

HSP 1 Score: 683.7 bits (1763), Expect = 1.3e-193
Identity = 329/393 (83.72%), Postives = 354/393 (90.08%), Query Frame = 1


Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60
           MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGV+ALRRPF HKVLD EDEFFSLLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVMALRRPFLHKVLDCEDEFFSLLM 60

Query: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120
           LVLETHSLRTTDASF+ESLYGLRRRAV ++VKKEDAR  SGDGIQH GLEKHQ++LSV F
Sbjct: 61  LVLETHSLRTTDASFAESLYGLRRRAVKIRVKKEDARPKSGDGIQHSGLEKHQRILSVVF 120

Query: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV 180
           LVVLPYFKSKLHSIYNKERE RLQASLWG+ +E   DAE +     ++V   TL  E ++
Sbjct: 121 LVVLPYFKSKLHSIYNKEREARLQASLWGNGDETVEDAEYFSGGDASLVSGETLDAEATI 180

Query: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240
           RAR+ KK QKIV SCYPWLHASSEG+SFAYQLLYLLDATGFYS GL  +G+HVCRATGQE
Sbjct: 181 RARLTKKIQKIVFSCYPWLHASSEGMSFAYQLLYLLDATGFYSFGLHALGIHVCRATGQE 240

Query: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300
           LMDTSSRISKIRS+ER+RLRGPPWLK  QG LL+C YTMLDYAQTGLIAAVF FKMMEWW
Sbjct: 241 LMDTSSRISKIRSNERDRLRGPPWLKTFQGALLSCAYTMLDYAQTGLIAAVFIFKMMEWW 300

Query: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360
           YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPP+RTICPLCS  RANPSVVT+SGFVFC
Sbjct: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPDRTICPLCSQMRANPSVVTISGFVFC 360

Query: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 394
           Y CIFKY+SQY RCP+TLMPANVDH+RRLFHDM
Sbjct: 361 YACIFKYVSQYNRCPVTLMPANVDHIRRLFHDM 393

[Close]

BLAST of Cucsa.178370 vs. TrEMBL
Match: B9IPB1_POPTR (Peroxisome biogenesis protein 12 OS=Populus trichocarpa GN=POPTR_0019s03680g PE=3 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 4.4e-189
Identity = 326/393 (82.95%), Postives = 355/393 (90.33%), Query Frame = 1


Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60
           MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPF HKVLD+EDEFFSLLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKVLDHEDEFFSLLM 60

Query: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120
           LVLETHSLRTTDASFSESLYGLRRR V ++VKKED R  SGDGIQH GLEKHQ++LSV F
Sbjct: 61  LVLETHSLRTTDASFSESLYGLRRRTVKIRVKKEDVRPNSGDGIQHSGLEKHQRILSVVF 120

Query: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV 180
           LVVLPYFKSKL+SIYNKERE RLQASLWG+ +E   DAE +   G+  + +R    ET++
Sbjct: 121 LVVLPYFKSKLYSIYNKEREARLQASLWGNGDETVEDAEYFS-GGEASLVSR----ETTI 180

Query: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240
           RAR+MKK QKI+  CYPWLHAS+EG+SFAYQLLYLLDATGFYSLGL  +G+HVCRATGQE
Sbjct: 181 RARLMKKIQKILFVCYPWLHASNEGMSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE 240

Query: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300
           LMDT+SRISKIRS+ERERL GPPWLKA+QG LL+C YTMLDYAQTGLIAAVF FKMMEWW
Sbjct: 241 LMDTTSRISKIRSNERERLHGPPWLKALQGALLSCGYTMLDYAQTGLIAAVFIFKMMEWW 300

Query: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360
           YQSAEERMSAPTVYPPPPPPP PKVAKEGIPLPP+RTICPLCS KRANPSVVT+SGFVFC
Sbjct: 301 YQSAEERMSAPTVYPPPPPPPAPKVAKEGIPLPPDRTICPLCSQKRANPSVVTISGFVFC 360

Query: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 394
           Y CIFKY+SQY RCP+TLMPANVD +RRLFHDM
Sbjct: 361 YACIFKYLSQYNRCPVTLMPANVDQIRRLFHDM 388

[Close]

BLAST of Cucsa.178370 vs. TrEMBL
Match: M5VZI4_PRUPE (Peroxisome biogenesis protein 12 OS=Prunus persica GN=PRUPE_ppa006828mg PE=3 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 2.2e-188
Identity = 319/393 (81.17%), Postives = 353/393 (89.82%), Query Frame = 1


Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60
           MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPF H+VLDYEDEFFSLLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHRVLDYEDEFFSLLM 60

Query: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120
           LVLETHSLRTTDASFSESLYGLRRRAV ++  K+D R   GDGIQH GLEK Q+VLSV F
Sbjct: 61  LVLETHSLRTTDASFSESLYGLRRRAVKIKAMKDDPRLNPGDGIQHSGLEKRQRVLSVVF 120

Query: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV 180
           LVVLPYFKSKLHSIYNKERE RLQASLWG  +E F+DA+I++   D+V+P   L +E+SV
Sbjct: 121 LVVLPYFKSKLHSIYNKEREARLQASLWGHVDERFDDADIFDRGEDSVIPRGNLDMESSV 180

Query: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240
           R R+ +K QK +G+CYP LHAS+EG SFAYQ+LYLLDATGFYSLGL  +G+HVCRATGQE
Sbjct: 181 RTRLTRKIQKFIGACYPLLHASTEGFSFAYQMLYLLDATGFYSLGLHALGIHVCRATGQE 240

Query: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300
           LMDTSSRISK RS ERERLRGPPWLKA+QG LL+  YT+LDYAQTGLIAAVFFFKMMEWW
Sbjct: 241 LMDTSSRISKTRSRERERLRGPPWLKALQGALLSGTYTVLDYAQTGLIAAVFFFKMMEWW 300

Query: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360
           YQSAEERMSAPT+YPPPPPPPPP+VAKEGIPLPP+RT+CPLCS +RANPSV+TVSGFVFC
Sbjct: 301 YQSAEERMSAPTIYPPPPPPPPPQVAKEGIPLPPDRTLCPLCSQRRANPSVITVSGFVFC 360

Query: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 394
           Y CIFKY+SQYKRCPITLMP  VD +RRLFHD+
Sbjct: 361 YACIFKYVSQYKRCPITLMPTTVDQIRRLFHDV 393

[Close]

BLAST of Cucsa.178370 vs. TrEMBL
Match: E0CU83_VITVI (Peroxisome biogenesis protein 12 OS=Vitis vinifera GN=VIT_14s0036g01130 PE=3 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 1.2e-186
Identity = 319/393 (81.17%), Postives = 349/393 (88.80%), Query Frame = 1


Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60
           MLFQVGGQG RPTFFEM+AAQQLPASLRAALTYSIGVLALRRPF H+VLDYEDEFF+LLM
Sbjct: 1   MLFQVGGQGARPTFFEMSAAQQLPASLRAALTYSIGVLALRRPFLHRVLDYEDEFFALLM 60

Query: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120
           LVLE+HSLRTTDASFSESLYGLRRRAV ++VKK++  S S D I H GLEK+QK LSV F
Sbjct: 61  LVLESHSLRTTDASFSESLYGLRRRAVRIRVKKDNTLSDSSDVIHHSGLEKYQKRLSVLF 120

Query: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV 180
           LVVLPYFKSKLHS+YNKERE  LQASLWG  +E F+DA+ +     +++PTR   VE SV
Sbjct: 121 LVVLPYFKSKLHSVYNKEREATLQASLWGHGDERFDDADYFSEERGSLIPTRASDVEVSV 180

Query: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240
           RAR+ K+FQK +G  YPWLHA +EGLSFAYQLLYLLDATGFYSLGL  +G+HVCRATGQE
Sbjct: 181 RARLTKRFQKFIGIFYPWLHAGNEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE 240

Query: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300
           LMDTSSRISKIRS ER+RLRGPPWLKA+QG LL+C YTMLDYAQTGLIAAVFFFKMMEWW
Sbjct: 241 LMDTSSRISKIRSRERDRLRGPPWLKALQGALLSCTYTMLDYAQTGLIAAVFFFKMMEWW 300

Query: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360
           YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLP +RTICPLCS KR NPSVV VSGFVFC
Sbjct: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPSDRTICPLCSQKRTNPSVVAVSGFVFC 360

Query: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 394
           Y CIFKY+SQYKRCPITLM ANVD +RRLFHD+
Sbjct: 361 YACIFKYVSQYKRCPITLMLANVDQIRRLFHDV 393

[Close]

BLAST of Cucsa.178370 vs. TAIR10
Match: AT3G04460.1 (AT3G04460.1 peroxin-12)

HSP 1 Score: 612.5 bits (1578), Expect = 1.9e-175
Identity = 288/394 (73.10%), Postives = 342/394 (86.80%), Query Frame = 1


Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60
           MLFQVGG+GTRPTFFEMAAAQQLPASLRAALTYS+GV ALRR F HK+LDYEDEFF+ LM
Sbjct: 1   MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM 60

Query: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120
           L+LE HSLRTTD SF+ESLYGLRR++  ++++K+ AR  S + +QH GLEK Q++LSV F
Sbjct: 61  LILEGHSLRTTDGSFAESLYGLRRKSARLRLRKDSARKDSSEEVQHSGLEKRQRILSVVF 120

Query: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTR--TLGVET 180
           LVVLPYFKSKLH+IYNKERE RL+ SLWG +++GF++A+ +   GD+ + +R  +   E 
Sbjct: 121 LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFF--TGDDSIVSREPSGNEEL 180

Query: 181 SVRARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATG 240
           SVR ++  K +K +  CYPW+HASSEGLSF YQLLYLLDATGFYSLGLQ +G+ VCRATG
Sbjct: 181 SVRVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATG 240

Query: 241 QELMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMME 300
           QELMDTSSRISKIR+HERERLRGPPWLK +QG LL+C Y +LDYAQTGLIAAVF FKMME
Sbjct: 241 QELMDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMME 300

Query: 301 WWYQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFV 360
           WWYQSAEER+SAPTVYPPPPPPP PK+AKEGIPLPP+R++C LC  KRANPSVVTVSGFV
Sbjct: 301 WWYQSAEERLSAPTVYPPPPPPPAPKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFV 360

Query: 361 FCYTCIFKYISQYKRCPITLMPANVDHVRRLFHD 393
           FCY+C+FKY+S+YKRCP+TL+PA+VD +RRLF D
Sbjct: 361 FCYSCVFKYVSKYKRCPVTLIPASVDQIRRLFQD 392

[Close]

BLAST of Cucsa.178370 vs. NCBI nr
Match: gi|449470218|ref|XP_004152815.1| (PREDICTED: peroxisome biogenesis protein 12 [Cucumis sativus])

HSP 1 Score: 799.7 bits (2064), Expect = 2.4e-228
Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 1


Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60
           MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60

Query: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120
           LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF
Sbjct: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120

Query: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV 180
           LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV
Sbjct: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV 180

Query: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240
           RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE
Sbjct: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240

Query: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300
           LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW
Sbjct: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300

Query: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360
           YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC
Sbjct: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360

Query: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 394
           YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM
Sbjct: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 393

[Close]

BLAST of Cucsa.178370 vs. NCBI nr
Match: gi|659082404|ref|XP_008441822.1| (PREDICTED: peroxisome biogenesis protein 12 [Cucumis melo])

HSP 1 Score: 795.0 bits (2052), Expect = 5.8e-227
Identity = 390/393 (99.24%), Postives = 392/393 (99.75%), Query Frame = 1


Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60
           MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60

Query: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120
           LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF
Sbjct: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120

Query: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV 180
           LVVLPYFKSKLHSIYNKERE RLQASLWGDDNEGFNDAEIYEVRGD+VVPTRTLGVETS+
Sbjct: 121 LVVLPYFKSKLHSIYNKEREARLQASLWGDDNEGFNDAEIYEVRGDHVVPTRTLGVETSL 180

Query: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240
           RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE
Sbjct: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240

Query: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300
           LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW
Sbjct: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300

Query: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360
           YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC
Sbjct: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360

Query: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 394
           YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM
Sbjct: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 393

[Close]

BLAST of Cucsa.178370 vs. NCBI nr
Match: gi|224125722|ref|XP_002319659.1| (peroxisome assembly protein 12 [Populus trichocarpa])

HSP 1 Score: 683.7 bits (1763), Expect = 1.9e-193
Identity = 329/393 (83.72%), Postives = 354/393 (90.08%), Query Frame = 1


Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60
           MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGV+ALRRPF HKVLD EDEFFSLLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVMALRRPFLHKVLDCEDEFFSLLM 60

Query: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120
           LVLETHSLRTTDASF+ESLYGLRRRAV ++VKKEDAR  SGDGIQH GLEKHQ++LSV F
Sbjct: 61  LVLETHSLRTTDASFAESLYGLRRRAVKIRVKKEDARPKSGDGIQHSGLEKHQRILSVVF 120

Query: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV 180
           LVVLPYFKSKLHSIYNKERE RLQASLWG+ +E   DAE +     ++V   TL  E ++
Sbjct: 121 LVVLPYFKSKLHSIYNKEREARLQASLWGNGDETVEDAEYFSGGDASLVSGETLDAEATI 180

Query: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240
           RAR+ KK QKIV SCYPWLHASSEG+SFAYQLLYLLDATGFYS GL  +G+HVCRATGQE
Sbjct: 181 RARLTKKIQKIVFSCYPWLHASSEGMSFAYQLLYLLDATGFYSFGLHALGIHVCRATGQE 240

Query: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300
           LMDTSSRISKIRS+ER+RLRGPPWLK  QG LL+C YTMLDYAQTGLIAAVF FKMMEWW
Sbjct: 241 LMDTSSRISKIRSNERDRLRGPPWLKTFQGALLSCAYTMLDYAQTGLIAAVFIFKMMEWW 300

Query: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360
           YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPP+RTICPLCS  RANPSVVT+SGFVFC
Sbjct: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPDRTICPLCSQMRANPSVVTISGFVFC 360

Query: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 394
           Y CIFKY+SQY RCP+TLMPANVDH+RRLFHDM
Sbjct: 361 YACIFKYVSQYNRCPVTLMPANVDHIRRLFHDM 393

[Close]

BLAST of Cucsa.178370 vs. NCBI nr
Match: gi|1009117848|ref|XP_015875539.1| (PREDICTED: peroxisome biogenesis protein 12 [Ziziphus jujuba])

HSP 1 Score: 674.1 bits (1738), Expect = 1.5e-190
Identity = 322/393 (81.93%), Postives = 354/393 (90.08%), Query Frame = 1


Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60
           MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPF HKVLDYEDEFF+LLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKVLDYEDEFFALLM 60

Query: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120
           L+LETHSLRTTDASFSESLYGLRRRAVN++VK++DA + SG  I H GL+K Q+VLSV  
Sbjct: 61  LILETHSLRTTDASFSESLYGLRRRAVNIKVKRDDAHASSGGEIHHSGLQKRQRVLSVVV 120

Query: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV 180
           LVVLPYFKSKLHSIYNKERE RLQASLWGD +E F+D +I +    +++   +   + SV
Sbjct: 121 LVVLPYFKSKLHSIYNKEREARLQASLWGDGDERFDDVDIIDTEESSLISRGSSDADASV 180

Query: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240
           R R+ K+ QKIVG+CYPWLHASSEGLSFAYQLLYLLDATGFYSLGL  +G+HVCRATGQE
Sbjct: 181 RTRLAKRIQKIVGACYPWLHASSEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE 240

Query: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300
           LMDTSSRISKIRS ERERLRGPPWLKA+QG LL+C YT+LDYAQTGLIAAVFFFKMMEWW
Sbjct: 241 LMDTSSRISKIRSRERERLRGPPWLKAVQGVLLSCTYTVLDYAQTGLIAAVFFFKMMEWW 300

Query: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360
           YQSAEERMSAPTVYPPPPPPPPP+VAKEGIPLPP+RT+CPLCS KR NPSVVTVSGFVFC
Sbjct: 301 YQSAEERMSAPTVYPPPPPPPPPQVAKEGIPLPPDRTLCPLCSQKRGNPSVVTVSGFVFC 360

Query: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 394
           Y CIFKY+SQYKRCP+TLMPA VD +RRLFHDM
Sbjct: 361 YACIFKYVSQYKRCPVTLMPATVDQIRRLFHDM 393

[Close]

BLAST of Cucsa.178370 vs. NCBI nr
Match: gi|743888585|ref|XP_011038487.1| (PREDICTED: peroxisome biogenesis protein 12-like isoform X2 [Populus euphratica])

HSP 1 Score: 671.0 bits (1730), Expect = 1.3e-189
Identity = 324/393 (82.44%), Postives = 351/393 (89.31%), Query Frame = 1


Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFFHKVLDYEDEFFSLLM 60
           MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGV+ALRRPF HKVLD EDEFFSLLM
Sbjct: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVMALRRPFLHKVLDCEDEFFSLLM 60

Query: 61  LVLETHSLRTTDASFSESLYGLRRRAVNVQVKKEDARSVSGDGIQHRGLEKHQKVLSVAF 120
           LVLETHSLRTTDASF+ESLYGLRRRAV ++VKKEDAR  SGDG+Q  GLEKHQ+ LSV F
Sbjct: 61  LVLETHSLRTTDASFAESLYGLRRRAVKIRVKKEDARPKSGDGVQLSGLEKHQRTLSVVF 120

Query: 121 LVVLPYFKSKLHSIYNKEREVRLQASLWGDDNEGFNDAEIYEVRGDNVVPTRTLGVETSV 180
           LVVLPYFKSKLHSIYNKERE RLQASLWG+ +E   +AE +     ++V   TL  E ++
Sbjct: 121 LVVLPYFKSKLHSIYNKEREARLQASLWGNGDETVEEAEYFSGGDASLVSGETLDAEATI 180

Query: 181 RARVMKKFQKIVGSCYPWLHASSEGLSFAYQLLYLLDATGFYSLGLQVIGVHVCRATGQE 240
           RAR+ KK QKIV SCYPWLHASSEG+SFAYQLLYLLDATGFYS GL  +G+HVCRATGQE
Sbjct: 181 RARLTKKIQKIVFSCYPWLHASSEGMSFAYQLLYLLDATGFYSFGLHALGIHVCRATGQE 240

Query: 241 LMDTSSRISKIRSHERERLRGPPWLKAIQGGLLTCLYTMLDYAQTGLIAAVFFFKMMEWW 300
           LMDTSSRISKIRS+ER+RLRGPPWLK +QG LL+C YTMLDYAQTGLIAAVF FKMMEWW
Sbjct: 241 LMDTSSRISKIRSNERDRLRGPPWLKTLQGALLSCAYTMLDYAQTGLIAAVFIFKMMEWW 300

Query: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPNRTICPLCSDKRANPSVVTVSGFVFC 360
           YQSAEERMSAPTVYPPPPPPP PKVAKEGIPLPP+RTICPLCS  RANPSVVT+SGFVFC
Sbjct: 301 YQSAEERMSAPTVYPPPPPPPAPKVAKEGIPLPPDRTICPLCSQMRANPSVVTISGFVFC 360

Query: 361 YTCIFKYISQYKRCPITLMPANVDHVRRLFHDM 394
           Y CIFKY+SQY RCP+TLMPANVD +RRLFHDM
Sbjct: 361 YACIFKYVSQYNRCPVTLMPANVDQIRRLFHDM 393

The following BLAST results are available for this feature:

BLAST of Cucsa.178370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PEX12_ARATH	3.3e-174	73.10	Peroxisome biogenesis protein 12 OS=Arabidopsis thaliana GN=PEX12 PE=1 SV=2	[more]
PEX12_DICDI	2.0e-38	30.46	Putative peroxisome assembly protein 12 OS=Dictyostelium discoideum GN=pex12 PE=...	[more]
PEX12_HUMAN	7.2e-36	29.16	Peroxisome assembly protein 12 OS=Homo sapiens GN=PEX12 PE=1 SV=1	[more]
PEX12_MOUSE	9.5e-36	28.39	Peroxisome assembly protein 12 OS=Mus musculus GN=Pex12 PE=1 SV=1	[more]
PEX12_CRILO	9.5e-36	29.29	Peroxisome assembly protein 12 OS=Cricetulus longicaudatus GN=PEX12 PE=2 SV=1	[more]

BLAST of Cucsa.178370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJL9_CUCSA	1.6e-228	100.00	Peroxisome biogenesis protein 12 OS=Cucumis sativus GN=Csa_2G075430 PE=3 SV=1	[more]
B9I5P7_POPTR	1.3e-193	83.72	Peroxisome biogenesis protein 12 OS=Populus trichocarpa GN=POPTR_0013s04500g PE=...	[more]
B9IPB1_POPTR	4.4e-189	82.95	Peroxisome biogenesis protein 12 OS=Populus trichocarpa GN=POPTR_0019s03680g PE=...	[more]
M5VZI4_PRUPE	2.2e-188	81.17	Peroxisome biogenesis protein 12 OS=Prunus persica GN=PRUPE_ppa006828mg PE=3 SV=...	[more]
E0CU83_VITVI	1.2e-186	81.17	Peroxisome biogenesis protein 12 OS=Vitis vinifera GN=VIT_14s0036g01130 PE=3 SV=...	[more]

BLAST of Cucsa.178370 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04460.1	1.9e-175	73.10	peroxin-12	[more]

BLAST of Cucsa.178370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470218\|ref\|XP_004152815.1\|	2.4e-228	100.00	PREDICTED: peroxisome biogenesis protein 12 [Cucumis sativus]	[more]
gi\|659082404\|ref\|XP_008441822.1\|	5.8e-227	99.24	PREDICTED: peroxisome biogenesis protein 12 [Cucumis melo]	[more]
gi\|224125722\|ref\|XP_002319659.1\|	1.9e-193	83.72	peroxisome assembly protein 12 [Populus trichocarpa]	[more]
gi\|1009117848\|ref\|XP_015875539.1\|	1.5e-190	81.93	PREDICTED: peroxisome biogenesis protein 12 [Ziziphus jujuba]	[more]
gi\|743888585\|ref\|XP_011038487.1\|	1.3e-189	82.44	PREDICTED: peroxisome biogenesis protein 12-like isoform X2 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006845	Pex_N
IPR013083	Znf_RING/FYVE/PHD
IPR017375	PEX12

Vocabulary: **Cellular Component**
Term	Definition
GO:0005779	integral component of peroxisomal membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006625	protein targeting to peroxisome

Vocabulary: **Molecular Function**
Term	Definition
GO:0008022	protein C-terminus binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048598	embryonic morphogenesis
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0006513	protein monoubiquitination
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0006625	protein targeting to peroxisome
cellular_component	GO:0005779	integral component of peroxisomal membrane
molecular_function	GO:0008022	protein C-terminus binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.178370.1	Cucsa.178370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006845	Pex, N-terminal	PFAM	PF04757	Pex2_Pex12	coord: 20..303 score: 5.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 337..383 score: 1.
IPR017375	Peroxisome assembly protein 12	PIR	PIRSF038074	Peroxin-12	coord: 1..393 score: 1.2E
IPR017375	Peroxisome assembly protein 12	PANTHER	PTHR12888	PEROXISOME ASSEMBLY PROTEIN 12 PEROXIN-12	coord: 1..393 score: 1.4E
None	No IPR available	PANTHER	PTHR12888:SF0	PEROXISOME ASSEMBLY PROTEIN 12	coord: 1..393 score: 1.4E
None	No IPR available	PFAM	PF13923	zf-C3HC4_2	coord: 339..376 score: 1.
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 338..389 score: 1.91

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.178370	Cla007906	Watermelon (97103) v1	cgywmB342
Cucsa.178370	Csa2G075430	Cucumber (Chinese Long) v2	cgycuB274
Cucsa.178370	MELO3C008694	Melon (DHL92) v3.5.1	cgymeB320
Cucsa.178370	ClCG11G010490	Watermelon (Charleston Gray)	cgywcgB319
Cucsa.178370	CSPI02G07430	Wild cucumber (PI 183967)	cgycpiB284
Cucsa.178370	CmoCh05G008080	Cucurbita moschata (Rifu)	cgycmoB0510
Cucsa.178370	Lsi11G008890	Bottle gourd (USVL1VR-Ls)	cgylsiB300
Cucsa.178370	Cp4.1LG11g06960	Cucurbita pepo (Zucchini)	cgycpeB0491
Cucsa.178370	MELO3C008694.2	Melon (DHL92) v3.6.1	cgymedB315
Cucsa.178370	CsaV3_2G009880	Cucumber (Chinese Long) v3	cgycucB287
Cucsa.178370	Cla97C11G216730	Watermelon (97103) v2	cgywmbB323
Cucsa.178370	Bhi06G000955	Wax gourd	cgywgoB366
Cucsa.178370	Carg19850	Silver-seed gourd	carcgyB0204

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.178370	Cucurbita maxima (Rimu)	cgycmaB0509
Cucsa.178370	Cucurbita maxima (Rimu)	cgycmaB0510
Cucsa.178370	Cucurbita moschata (Rifu)	cgycmoB0509
Cucsa.178370	Cucurbita pepo (Zucchini)	cgycpeB0492