Cucsa.177290 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGCTTTTGGAGTAAATGTCTTGACCATTATTGTTACTGCATTGCTTGGAATTACTATGAAAATTGGTGGAAGAAGACGGAGGGTATGTTTCACTTATCACAGGTTGCCCCTAGTTTTCTACATTCACAAAGCAAAAACAGTGACCAAATTCTTAATTTCCACAACGACTAATTAAGATATCTTCAAGAGTCCTTTTCATCTTAAGATTTTGTGGTTGGTTTTCATTGTTCGTCATTATTCAATGTCTAATATCTCTGAACTTTAAAGACTTGTAGATAAAAATTTCTATGTTGATGAGTTAGAATCACTCAGTTATTACAAATATCCAGCCTTGGGAAAATTGAGCTTCATGCTAGTTTCCATAGTTTGTTGGTCATTTGATGATTTAGACTTCTGTTAAGTATCGGAAACACAAGAAAAACGCTAAAGTAACTATATTGCAATATCAATGAAGTGATTAAAATATCAATAGCCTTTTGATTGGACTCTCTCTCTCAAAGTCCCATTATGAAGAACCCCGCCAAAATGATCACGTAAGGACTGTTGTAACTGATGGTATGTTCATATTGATTTCTTGCGTTGTTTCCATACTGCATTTATCAGTTTTCCACACTTCTTTTTGTAGAATTTTCAGAGAAGTCTTCTGGAGAAAATTTTCTTTCATTTCCTTCCAGCCATTGGACTATGTTTATCACTCTTTGAGATGATGTTTCTTCTGAGGAAATTATTCACCGGTGATGTTGTTGAATACCATGAGTGGTTATCAACAAGTTCACTACTTGCAGTCTGGGTAAGCTATCTAACCTTAGGTTACTTGTCATTAGTTGTTTTTCATGATCTATACAACTTTTTCTTTATTGTTTGTTTTATGAGTTTCTTTGTGAATATGTAGATTTTCACTTCAATCTTTGCAAATTGTTCCAACTTTGAACACATATTTAACAACAAAATGCTCTGTTTATGGTGGATTGTGAGAGCAATATTTGGGATTTTCATTTTCGTGTCGACATATGCAGACTTTGAGGTACTCATATTGTCTCCTAACTGTATCATTATATTCTGTTATCATCATGTTTGTTCCTACATTTTACTATTAACTTAATTTCATCTTGTGATCTCATCCATATATCTAGGATTTTGATCCTCATTCCGTTACTTTTAAATGAACTTACATGTCACTCTGAAGTTTGATTCTTTTATTTGTTTAATTCTTATTTTGGACTGCTGTAACTTCGTAAGTCTTCGAGAACTTTTCTAGTCATAACTCGTAAAATATTTTATACACATCGCTGGACTATGAATGCTTATTGAATTGCGTAAAGTGTGCACTAATAATAACAAGTTTTTCTTGTATAGATACTCAAAACAGTGAACAGCAGTTTTGTTGTTTTGTTGGATGTTTTGTTTGGCACATTAGCATTCATTATCAGTTCAGAGCATGCAAAAAGCAGGTACGTTAAGTTTTAATATCAATGGATGA ATTTGCTTTTGGAGTAAATGTCTTGACCATTATTGTTACTGCATTGCTTGGAATTACTATGAAAATTGGTGGAAGAAGACGGAGGAATTTTCAGAGAAGTCTTCTGGAGAAAATTTTCTTTCATTTCCTTCCAGCCATTGGACTATGTTTATCACTCTTTGAGATGATGTTTCTTCTGAGGAAATTATTCACCGGTGATGTTGTTGAATACCATGAGTGGTTATCAACAAGTTCACTACTTGCAGTCTGGATTTTCACTTCAATCTTTGCAAATTGTTCCAACTTTGAACACATATTTAACAACAAAATGCTCTGTTTATGGTGGATTGTGAGAGCAATATTTGGGATTTTCATTTTCGTGTCGACATATGCAGACTTTGAGCATTCATTATCAGTTCAGAGCATGCAAAAAGCAGGTACGTTAAGTTTTAATATCAATGGATGA ATGAAAATTGGTGGAAGAAGACGGAGGAATTTTCAGAGAAGTCTTCTGGAGAAAATTTTCTTTCATTTCCTTCCAGCCATTGGACTATGTTTATCACTCTTTGAGATGATGTTTCTTCTGAGGAAATTATTCACCGGTGATGTTGTTGAATACCATGAGTGGTTATCAACAAGTTCACTACTTGCAGTCTGGATTTTCACTTCAATCTTTGCAAATTGTTCCAACTTTGAACACATATTTAACAACAAAATGCTCTGTTTATGGTGGATTGTGAGAGCAATATTTGGGATTTTCATTTTCGTGTCGACATATGCAGACTTTGAGCATTCATTATCAGTTCAGAGCATGCAAAAAGCAGGTACGTTAAGTTTTAATATCAATGGATGA MKIGGRRRRNFQRSLLEKIFFHFLPAIGLCLSLFEMMFLLRKLFTGDVVEYHEWLSTSSLLAVWIFTSIFANCSNFEHIFNNKMLCLWWIVRAIFGIFIFVSTYADFEHSLSVQSMQKAGTLSFNING*
BLAST of Cucsa.177290 vs. TrEMBL
Match: A0A0A0LF13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710830 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 8.2e-36 Identity = 80/98 (81.63%), Postives = 83/98 (84.69%), Query Frame = 1
BLAST of Cucsa.177290 vs. TrEMBL
Match: A0A072VNC5_MEDTR (Multidrug resistance-associated protein ABC domain protein OS=Medicago truncatula GN=MTR_2g105190 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 9.1e-19 Identity = 53/128 (41.41%), Postives = 74/128 (57.81%), Query Frame = 1
BLAST of Cucsa.177290 vs. TrEMBL
Match: A0A072VC82_MEDTR (Multidrug resistance-associated protein ABC domain protein OS=Medicago truncatula GN=MTR_2g105190 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 9.1e-19 Identity = 53/128 (41.41%), Postives = 74/128 (57.81%), Query Frame = 1
BLAST of Cucsa.177290 vs. TrEMBL
Match: G7ZYY5_MEDTR (ABC transporter C family member OS=Medicago truncatula GN=MTR_080s0031 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 9.1e-19 Identity = 53/128 (41.41%), Postives = 74/128 (57.81%), Query Frame = 1
BLAST of Cucsa.177290 vs. TrEMBL
Match: A0A067DM07_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0004971mg PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.2e-17 Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 1
BLAST of Cucsa.177290 vs. TAIR10
Match: AT2G07680.1 (AT2G07680.1 multidrug resistance-associated protein 11) HSP 1 Score: 50.4 bits (119), Expect = 9.3e-07 Identity = 28/85 (32.94%), Postives = 46/85 (54.12%), Query Frame = 1
BLAST of Cucsa.177290 vs. NCBI nr
Match: gi|778682948|ref|XP_011651814.1| (PREDICTED: ABC transporter C family member 13 isoform X1 [Cucumis sativus]) HSP 1 Score: 227.6 bits (579), Expect = 1.2e-56 Identity = 115/133 (86.47%), Postives = 118/133 (88.72%), Query Frame = 1
BLAST of Cucsa.177290 vs. NCBI nr
Match: gi|778682951|ref|XP_011651815.1| (PREDICTED: ABC transporter C family member 13 isoform X2 [Cucumis sativus]) HSP 1 Score: 227.6 bits (579), Expect = 1.2e-56 Identity = 115/133 (86.47%), Postives = 118/133 (88.72%), Query Frame = 1
BLAST of Cucsa.177290 vs. NCBI nr
Match: gi|778682954|ref|XP_011651816.1| (PREDICTED: ABC transporter C family member 13 isoform X3 [Cucumis sativus]) HSP 1 Score: 227.6 bits (579), Expect = 1.2e-56 Identity = 115/133 (86.47%), Postives = 118/133 (88.72%), Query Frame = 1
BLAST of Cucsa.177290 vs. NCBI nr
Match: gi|778682957|ref|XP_011651817.1| (PREDICTED: ABC transporter C family member 13 isoform X4 [Cucumis sativus]) HSP 1 Score: 227.6 bits (579), Expect = 1.2e-56 Identity = 115/133 (86.47%), Postives = 118/133 (88.72%), Query Frame = 1
BLAST of Cucsa.177290 vs. NCBI nr
Match: gi|659130380|ref|XP_008465138.1| (PREDICTED: ABC transporter C family member 13 isoform X1 [Cucumis melo]) HSP 1 Score: 215.3 bits (547), Expect = 6.2e-53 Identity = 102/107 (95.33%), Postives = 105/107 (98.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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