Cucsa.177280 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.177280
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionABC transporter family protein
Locationscaffold01225 : 1316127 .. 1318250 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCATCTTCTGATTAGGAAATTAGTGATACAGATCTTAGTAGTCTTCCATGTGTCTATGACTTTGAGCATGTTTATTAAGTTTTCCATCTTCATTGATTTGGTCCGTCAGGTTCCAGTTAGGCTAGAAAAATTTAATGCAACTTTGGATTAAATCCATATAGAATTTGATGCACAATCACGCTCAACTTTACATCTATGTGCTTGTCCATATGTAAACGTGTTTATCTTATCTGCATGCTCTTTTTACACACAAGGATCTCATTCACTACCGTTGTAATCCTTTCTCACTTTTCTTGCTTATTCACGTACAATAATTTCGGACTAAATCGTGGTTTCATATTTTTACAAACATATAGTGATAATAAAACCACCGTTATTATGAGGTTAGAGTGTGCTTATAAGCTCTTTCATCCTTGCACGTTACGCATCAATTCTCTACTCAGGAAATCTTTGGATTATTTTGACGTTTTGTAGTTCAATGGAAGATTCGCTTCTATATGTGGATGTGGACCTAGAGGATAGTCATATGGGGAATAATGTAAGAAAAATCCGTTATCTTTTACATTCCTTTTCATTTCCCATCAGTTGAAATTGTTTGAGAAAAGTTGTTAGAACTAGAAGATAGGTTCTTTAGCTTCAGTTGCTTTTCCGTGTTCTTTATTTTGTGATCATTGATCGACCTTTACCAAAGATATTTGCTAATTATGCTTATCTTTTCTTTTATTAATTCTCTAGCTAATTATTTCTTAAATGAGACACGAGGAAGTTACTTTTTCTTCTTTTCTTTGTGCCCTTGGTTCAGGAACCATGTTATTGTTTAGTAAATCTGTCTACCATTTGATAAGCATGTCCTCCAATGTTTTGTACCCTTATTTGTTTGAATGTGAGTTATGATAATTGATTATTACACGTTTTGGTTCAGAAGGAAGATAAACAAAGCTGTTGGAATCTTTTGACATTCAATTCTGTCACTTCAGTTATGGATGATGGTGCCAAAAAGCAGTTGAATTTTGAAGATTTATTGCAGCTTCCAAATGAGATGGATCCTTCTTTCTGCCACAACAAGTTGTCATTCTGCTGGAAAGATCAATGTTCCAGAAATTGCTTAAACCCATCATTTTTTTGGGCAATCTGTTGTGCATATGGTTGGTCATATGTTTCTCTTGGTTTATTGAAGGTATTTCCGTATCTTAAAAGTGCCATGTTTTCTCATTTGATAGATAGTAAAGAAAAAAAAAAAAAACAGAAAGTAAGAATTTTATATTTCAAGGTTTTCATTTCACAGAGATGTAGACGTGATTGAAGCTTCTAATTCCTGCTTCTTTTCTTACATATTATGATATTCTTTTTACCCCAATTTTTGTCCTAACCACATTGGCATTAGCAACTTGCAATAACATCCTATTTTACCAAGGGGAAAGCCATTACTTTGTCCATAGCCTGATCTCAGTCATTGACTAGATATATATTTACCTTGTCCAGGTGCTTAATGACTGTATTAATTTTGTTGGACCAATGCTTCTCAATCGGTTGATTCATTATCTTCAGCAAGGTTTTTACATTACATCCGTGATCTTTTCTTTGTCATCAGTTTATGAATATTGATCATATCATATTTCTCCTTATTATTCCCTTCCCCCCTGCTTATTCATGTTATGCCTTCTCCTCATTTTCCTTTAGTTGAAACTTTGATACTTACGCAGATGGTTTTGTACACTTCTATAAGTCTTTCTATTGTTCCACTGACAAAGTGTTGCTTTATATTTTGTTTCTACATTTTAGTGTTTGCTTCATTAGCAAAGTAGGCACAGAAATATGGGGGCACTTAAAACAACAAACTCTTTATTACTCTGAAAGACCCTTGGCTATTGGTGCTTATCCTCATTGTCAATGCATAGTTACTGGTCTACGAAAGGGATTTCTAGAAAAGAATAGATGTCATACGTAAAACATTGATTTGTTCTAATTTATGTTGTGAGAACTTAACCACCATTGCATAAACTATATATTGACAAGATGATATACTGACATTTATCTTTTTTACTTTTATTTAATCAGGCAGTGGCACATCAGATGGCTATGTTCTCGCAATTTCTTTGGGACTCACCTCTATCTTCAAGTAA

mRNA sequence

ATCATCTTCTGATTAGGAAATTAGTGATACAGATCTTAGTAGTCTTCCATGTGTCTATGACTTTGAGCATGTTTATTAAGTTTTCCATCTTCATTGATTTGAATTTGATGCACAATCACGCTCAACTTTACATCTATGTGCTTGTCCATATTTCAATGGAAGATTCGCTTCTATATGTGGATGTGGACCTAGAGGATAGTCATATGGGGAATAATAAGGAAGATAAACAAAGCTGTTGGAATCTTTTGACATTCAATTCTGTCACTTCAGTTATGGATGATGGTGCCAAAAAGCAGTTGAATTTTGAAGATTTATTGCAGCTTCCAAATGAGATGGATCCTTCTTTCTGCCACAACAAGTTGTCATTCTGCTGGAAAGATCAATGTTCCAGAAATTGCTTAAACCCATCATTTTTTTGGGCAATCTGTTGTGCATATGGTTGGTCATATGTTTCTCTTGGTTTATTGAAGGTGCTTAATGACTGTATTAATTTTGTTGGACCAATGCTTCTCAATCGGTTGATTCATTATCTTCAGCAAGGCAGTGGCACATCAGATGGCTATGTTCTCGCAATTTCTTTGGGACTCACCTCTATCTTCAAGTAA

Coding sequence (CDS)

ATCATCTTCTGATTAGGAAATTAGTGATACAGATCTTAGTAGTCTTCCATGTGTCTATGACTTTGAGCATGTTTATTAAGTTTTCCATCTTCATTGATTTGAATTTGATGCACAATCACGCTCAACTTTACATCTATGTGCTTGTCCATATTTCAATGGAAGATTCGCTTCTATATGTGGATGTGGACCTAGAGGATAGTCATATGGGGAATAATAAGGAAGATAAACAAAGCTGTTGGAATCTTTTGACATTCAATTCTGTCACTTCAGTTATGGATGATGGTGCCAAAAAGCAGTTGAATTTTGAAGATTTATTGCAGCTTCCAAATGAGATGGATCCTTCTTTCTGCCACAACAAGTTGTCATTCTGCTGGAAAGATCAATGTTCCAGAAATTGCTTAAACCCATCATTTTTTTGGGCAATCTGTTGTGCATATGGTTGGTCATATGTTTCTCTTGGTTTATTGAAGGTGCTTAATGACTGTATTAATTTTGTTGGACCAATGCTTCTCAATCGGTTGATTCATTATCTTCAGCAAGGCAGTGGCACATCAGATGGCTATGTTCTCGCAATTTCTTTGGGACTCACCTCTATCTTCAAGTAA

Protein sequence

HLLIRKLVIQILVVFHVSMTLSMFIKFSIFIDLNLMHNHAQLYIYVLVHISMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNEMDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLLNRLIHYLQQGSGTSDGYVLAISLGLTSIFK*
Homology
[Close]
BLAST of Cucsa.177280 vs. Swiss-Prot
Match: AB13C_ARATH (ABC transporter C family member 13 OS=Arabidopsis thaliana GN=ABCC13 PE=2 SV=3)

HSP 1 Score: 112.5 bits (280), Expect = 5.5e-24
Identity = 60/125 (48.00%), Postives = 71/125 (56.80%), Query Frame = 1 

Query: 50  ISMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPN 109
           I +ED L+  D D +        E   S W+L TF  + S+M  G+ KQL  E+LL LP 
Sbjct: 176 IPLEDPLIEDDDDQKRIVRRLFLEKNGSWWDLFTFGYIGSIMKHGSVKQLELENLLTLPP 235

Query: 110 EMDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPML 169
           EMDP  C   L  CW+ Q   N   PS  W+I   YGW Y  LGLLKV NDCI F GP+L
Sbjct: 236 EMDPFTCCENLLRCWQLQECNNYSTPSLIWSIYGVYGWPYFRLGLLKVFNDCIGFAGPLL 295

Query: 170 LNRLI 175
           LNRLI
Sbjct: 296 LNRLI 300

[Close]
BLAST of Cucsa.177280 vs. Swiss-Prot
Match: ABCC8_DICDI (ABC transporter C family member 8 OS=Dictyostelium discoideum GN=abcC8 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-10
Identity = 50/174 (28.74%), Postives = 86/174 (49.43%), Query Frame = 1 

Query: 20  TLSMFIKFSIFIDLNLMHNHAQLYIYVLVHISMEDSLLYVD-----VDLEDSHMGNNKED 79
           TL++ I      ++  +   +    Y L+ I    S+L+ D      +LE++ +  +KE 
Sbjct: 150 TLTLAIAGKSIYNVGFLEYFSYFVGYCLILILSITSVLFFDNLESYQNLEENEI--SKEV 209

Query: 80  KQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNEMDPSFC-HNKLSFCWKDQCSRNCL 139
             + ++ LTF  + SV+  G KK L   D+  L  E+D S     K    W++Q  +   
Sbjct: 210 NANLFSRLTFWWINSVLVKGHKKALEISDVPTL-GEIDQSILLSEKFEKAWEEQLKKP-- 269

Query: 140 NPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLLNRLIHYLQQGSGTSDGY 188
           NPS  WA+  A+G  +    L K++ D + FVGP LL R++ +++   G+ D Y
Sbjct: 270 NPSLPWALAKAFGPHFYIAALFKIIQDLLIFVGPTLLKRVLGFVESRDGSQDTY 318

[Close]
BLAST of Cucsa.177280 vs. TrEMBL
Match: A0A0A0LF13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710830 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 1.9e-84
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 

Query: 51  SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE 110
           SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE
Sbjct: 106 SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE 165

Query: 111 MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL 170
           MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL
Sbjct: 166 MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL 225

Query: 171 NRLIHYLQQGSGTSDGYVLAISLGLTSIFK 201
           NRLIHYLQQGSGTSDGYVLAISLGLTSIFK
Sbjct: 226 NRLIHYLQQGSGTSDGYVLAISLGLTSIFK 255

[Close]
BLAST of Cucsa.177280 vs. TrEMBL
Match: W9RHK2_9ROSA (ABC transporter C family member 13 OS=Morus notabilis GN=L484_018058 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.8e-43
Identity = 91/149 (61.07%), Postives = 109/149 (73.15%), Query Frame = 1 

Query: 52  MEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNEM 111
           MED LL  DVDLE+     +    QS  +L+TF S+ SVM+ G  KQL+F+DLL+LP +M
Sbjct: 88  MEDPLLSSDVDLEEG-CDRDSGSNQSYLDLVTFKSIASVMNHGVIKQLDFDDLLRLPADM 147

Query: 112 DPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLLN 171
           DPS CH+ L   W+ QCS +C NPS   AIC AYGW Y  LGLLKVLNDC+ FVGP+LLN
Sbjct: 148 DPSCCHDTLLRSWQSQCSNDCSNPSLLMAICHAYGWPYFRLGLLKVLNDCVGFVGPLLLN 207

Query: 172 RLIHYLQQGSGTSDGYVLAISLGLTSIFK 201
           +LI +L QGSG  DGYVLA+SLGLTSIFK
Sbjct: 208 KLIRFLDQGSGHVDGYVLAVSLGLTSIFK 235

[Close]
BLAST of Cucsa.177280 vs. TrEMBL
Match: A0A0J8BI00_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223000 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 8.3e-43
Identity = 85/139 (61.15%), Postives = 104/139 (74.82%), Query Frame = 1 

Query: 62  DLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNEMDPSFCHNKLS 121
           DLE+ H   N    +S WNL+TF+S+ S+MD G  KQL+FE+LL LP +MDPS CH+ L 
Sbjct: 199 DLEEGHT-RNSGTVESIWNLMTFSSIKSIMDKGVTKQLDFEELLNLPLDMDPSSCHSLLL 258

Query: 122 FCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLLNRLIHYLQQGS 181
            CW+ Q   NC NPSFF AIC AYGW Y+ LGLLKV NDCI FVGP+LLN+LI YLQ+GS
Sbjct: 259 ICWQAQQIDNCSNPSFFKAICSAYGWPYLRLGLLKVFNDCIGFVGPLLLNQLIQYLQEGS 318

Query: 182 GTSDGYVLAISLGLTSIFK 201
           G  DG++ A+SLGLTS+ K
Sbjct: 319 GGMDGFLFAVSLGLTSVLK 336

[Close]
BLAST of Cucsa.177280 vs. TrEMBL
Match: A0A067DM07_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0004971mg PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-42
Identity = 93/151 (61.59%), Postives = 113/151 (74.83%), Query Frame = 1 

Query: 51  SMEDSLLYVDVDLED---SHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQL 110
           S+E+SLL VD D+E+   +  GNN    QS W+L+ F S+ SVM+ G  KQL+FEDLL L
Sbjct: 185 SIEESLLSVDGDVEEDCNTDSGNN----QSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGL 244

Query: 111 PNEMDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGP 170
           P +MDPS CH+KL  CW+ Q S NC NPS   AICCAYG+ Y+ LGLLKV+ND I F GP
Sbjct: 245 PTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFAGP 304

Query: 171 MLLNRLIHYLQQGSGTSDGYVLAISLGLTSI 199
           +LLN+LI +LQQGSG  DGYVLAI+LGLTSI
Sbjct: 305 LLLNKLIKFLQQGSGHLDGYVLAIALGLTSI 331

[Close]
BLAST of Cucsa.177280 vs. TrEMBL
Match: A0A067DZH8_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0004971mg PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-42
Identity = 93/151 (61.59%), Postives = 113/151 (74.83%), Query Frame = 1 

Query: 51  SMEDSLLYVDVDLED---SHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQL 110
           S+E+SLL VD D+E+   +  GNN    QS W+L+ F S+ SVM+ G  KQL+FEDLL L
Sbjct: 184 SIEESLLSVDGDVEEDCNTDSGNN----QSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGL 243

Query: 111 PNEMDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGP 170
           P +MDPS CH+KL  CW+ Q S NC NPS   AICCAYG+ Y+ LGLLKV+ND I F GP
Sbjct: 244 PTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFAGP 303

Query: 171 MLLNRLIHYLQQGSGTSDGYVLAISLGLTSI 199
           +LLN+LI +LQQGSG  DGYVLAI+LGLTSI
Sbjct: 304 LLLNKLIKFLQQGSGHLDGYVLAIALGLTSI 330

[Close]
BLAST of Cucsa.177280 vs. TAIR10
Match: AT2G07680.1 (AT2G07680.1 multidrug resistance-associated protein 11)

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-25
Identity = 60/125 (48.00%), Postives = 70/125 (56.00%), Query Frame = 1 

Query: 50  ISMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPN 109
           I +ED L+      ED       E   S W+L TF  + S+M  G+ KQL  E+LL LP 
Sbjct: 176 IPLEDPLI------EDDDDQKRIEKNGSWWDLFTFGYIGSIMKHGSVKQLELENLLTLPP 235

Query: 110 EMDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPML 169
           EMDP  C   L  CW+ Q   N   PS  W+I   YGW Y  LGLLKV NDCI F GP+L
Sbjct: 236 EMDPFTCCENLLRCWQLQECNNYSTPSLIWSIYGVYGWPYFRLGLLKVFNDCIGFAGPLL 294

Query: 170 LNRLI 175
           LNRLI
Sbjct: 296 LNRLI 294

[Close]
BLAST of Cucsa.177280 vs. NCBI nr
Match: gi|778682957|ref|XP_011651817.1| (PREDICTED: ABC transporter C family member 13 isoform X4 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 2.8e-84
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 

Query: 51  SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE 110
           SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE
Sbjct: 190 SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE 249

Query: 111 MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL 170
           MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL
Sbjct: 250 MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL 309

Query: 171 NRLIHYLQQGSGTSDGYVLAISLGLTSIFK 201
           NRLIHYLQQGSGTSDGYVLAISLGLTSIFK
Sbjct: 310 NRLIHYLQQGSGTSDGYVLAISLGLTSIFK 339

[Close]
BLAST of Cucsa.177280 vs. NCBI nr
Match: gi|700203523|gb|KGN58656.1| (hypothetical protein Csa_3G710830 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 2.8e-84
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 

Query: 51  SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE 110
           SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE
Sbjct: 106 SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE 165

Query: 111 MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL 170
           MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL
Sbjct: 166 MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL 225

Query: 171 NRLIHYLQQGSGTSDGYVLAISLGLTSIFK 201
           NRLIHYLQQGSGTSDGYVLAISLGLTSIFK
Sbjct: 226 NRLIHYLQQGSGTSDGYVLAISLGLTSIFK 255

[Close]
BLAST of Cucsa.177280 vs. NCBI nr
Match: gi|778682954|ref|XP_011651816.1| (PREDICTED: ABC transporter C family member 13 isoform X3 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 2.8e-84
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 

Query: 51  SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE 110
           SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE
Sbjct: 190 SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE 249

Query: 111 MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL 170
           MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL
Sbjct: 250 MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL 309

Query: 171 NRLIHYLQQGSGTSDGYVLAISLGLTSIFK 201
           NRLIHYLQQGSGTSDGYVLAISLGLTSIFK
Sbjct: 310 NRLIHYLQQGSGTSDGYVLAISLGLTSIFK 339

[Close]
BLAST of Cucsa.177280 vs. NCBI nr
Match: gi|778682948|ref|XP_011651814.1| (PREDICTED: ABC transporter C family member 13 isoform X1 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 2.8e-84
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 

Query: 51  SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE 110
           SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE
Sbjct: 190 SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE 249

Query: 111 MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL 170
           MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL
Sbjct: 250 MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL 309

Query: 171 NRLIHYLQQGSGTSDGYVLAISLGLTSIFK 201
           NRLIHYLQQGSGTSDGYVLAISLGLTSIFK
Sbjct: 310 NRLIHYLQQGSGTSDGYVLAISLGLTSIFK 339

[Close]
BLAST of Cucsa.177280 vs. NCBI nr
Match: gi|778682960|ref|XP_011651818.1| (PREDICTED: ABC transporter C family member 13 isoform X5 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 2.8e-84
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 

Query: 51  SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE 110
           SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE
Sbjct: 12  SMEDSLLYVDVDLEDSHMGNNKEDKQSCWNLLTFNSVTSVMDDGAKKQLNFEDLLQLPNE 71

Query: 111 MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL 170
           MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL
Sbjct: 72  MDPSFCHNKLSFCWKDQCSRNCLNPSFFWAICCAYGWSYVSLGLLKVLNDCINFVGPMLL 131

Query: 171 NRLIHYLQQGSGTSDGYVLAISLGLTSIFK 201
           NRLIHYLQQGSGTSDGYVLAISLGLTSIFK
Sbjct: 132 NRLIHYLQQGSGTSDGYVLAISLGLTSIFK 161

The following BLAST results are available for this feature:
BLAST of Cucsa.177280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AB13C_ARATH5.5e-2448.00ABC transporter C family member 13 OS=Arabidopsis thaliana GN=ABCC13 PE=2 SV=3[more]
ABCC8_DICDI1.6e-1028.74ABC transporter C family member 8 OS=Dictyostelium discoideum GN=abcC8 PE=3 SV=1[more]
BLAST of Cucsa.177280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF13_CUCSA1.9e-84100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710830 PE=4 SV=1[more]
W9RHK2_9ROSA2.8e-4361.07ABC transporter C family member 13 OS=Morus notabilis GN=L484_018058 PE=4 SV=1[more]
A0A0J8BI00_BETVU8.3e-4361.15Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223000 PE=4 S... [more]
A0A067DM07_CITSI1.4e-4261.59Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0004971mg PE=4 ... [more]
A0A067DZH8_CITSI1.4e-4261.59Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0004971mg PE=4 ... [more]
BLAST of Cucsa.177280 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07680.13.1e-2548.00 multidrug resistance-associated protein 11[more]
BLAST of Cucsa.177280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778682957|ref|XP_011651817.1|2.8e-84100.00PREDICTED: ABC transporter C family member 13 isoform X4 [Cucumis sativus][more]
gi|700203523|gb|KGN58656.1|2.8e-84100.00hypothetical protein Csa_3G710830 [Cucumis sativus][more]
gi|778682954|ref|XP_011651816.1|2.8e-84100.00PREDICTED: ABC transporter C family member 13 isoform X3 [Cucumis sativus][more]
gi|778682948|ref|XP_011651814.1|2.8e-84100.00PREDICTED: ABC transporter C family member 13 isoform X1 [Cucumis sativus][more]
gi|778682960|ref|XP_011651818.1|2.8e-84100.00PREDICTED: ABC transporter C family member 13 isoform X5 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.177280.1Cucsa.177280.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 7..200
score: 3.1
NoneNo IPR availablePANTHERPTHR24223:SF232SERINE PROTEASE/ABC TRANSPORTER B FAMILY PROTEIN TAGB-RELATEDcoord: 7..200
score: 3.1