Cucsa.177160 (gene) Cucumber (Gy14) v1

NameCucsa.177160
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPentatricopeptide repeat-containing protein, putative
Locationscaffold01225 : 1141824 .. 1143821 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTTCTTCTCTCCACCCACACCCACTGTCTCCCCATTACCCAGAAACCCAATCACGCATACCATCGCCACCCACCATTTAATAATCTCCCTCATGTTCGTACTATGACTGTAGAGAATTATGCTAATTTATGCGTAGCCCACCAAGTGTTCGACGATATTCCTATATGGGATACTTTTGCATGGAACAATCTAATTCAAACCCATCTCACCAATGGAGATTTGGGGCATGTAATTTCAACCTATCGACAGATGTTATTTCGTGGAGTTCGTCCTGACAAACACACCCTTCCTCGAATTATATGTGCTACACGCCAGTATGGTGATCTACAGGTTGGCAAACAGCTCCACGCTCAAGCCTTCAAACTTGGGTTCTCCTCTAACCTTTATGTACTTACTTCCTTAATTGAGTTGTATGGGATTCTTGATAGTGCTGACACTGCAAAGTGGCTTCATGACAAGTCCACTTGTAGAAACTCTGTTTCTTGGACCGTTTTAGCTAAGCTGTACTTGAGGGAAGATAAACCCAGTCTTGCCCTAGACTTGTTTTACCAAATGGTGGAGTTGGCGGATGATATTGATGCAGTGGCTTTGGCCACGGCCATTGGTGCCTGTGGTGCTCTCAAAATGCTGCATCATGGGAGAAACATCCACCATCTTGCAAGAGTTCATGGCTTGGAATTTAATATATTGGTCAGTAATTCTCTATTGAAAATGTACATCGACTGTGATAGTATCAAAGATGCTCGGGGGTTCTTCGACCAAATGCCGTCCAAAGACATCATTTCCTGGACAGAACTTATCCATATGTACGTTAAGAAAGGTGGAATCAATGAGGCTTTTAAGCTGTTTCGACAAATGAATATGGATGGAGAATTGAAGCCTGATCCTCGTACAATCAGCAGCATTCTCCCAGCTTGTGGAAGAATGGCTGCACATAAGCATGGAAAAGAGATTCATGGATATGTGGTTAAAAATGCTTTTGACGAGAATCTCATCGTCCAAAATGCTTTGGTCGACATGTATGTCAAATCTGGATGTATACAATCTGCATCAAAAACTTTCTCGATGATGAAGGAGAAAGATATGGTTTCGTGGAGCATCATGACTTTGGGCTACAGCTTACATGGTCAAGGAAAACTGGGAGTCAGTTTGTTCCGTGAGATGGAGAAGAACTTTAAGATGCGTAGAGATGAGATCACTTACACTGCAGTTTTGCATGCTTGTACTACTGCAAACATGGTAGATGAAGGGGATTCTTACTTCAGTTGCATTACCAAGCCAACCGTGGCACACATTGCTCTAAAGGTGGCTCTTTTAGCTCGAGCGGGGAGACTGGATGAAGCTAGGACATTTGTAGAAAAAaaGAAACTTGATAAACATCCTGAGATTTTGAGAGCGTTGCTCGATGGATGCCGGAACCACCGTCAACAAAAACTAGGCAAGCGAATCATTGAGCAGCTGTGTGATTTGGAGCCTCTAAATGCTGAGAATTACATTCTACTTTCAAACTGGTATGCATGCAACGAaaaaTGGGACATGGTTGAAAAGTTGAGAGAAACAATAAGAGACATGGGATTAAGACCCAAGAAGGCTTACAGTTGGATAGAGTTTTGCAACAAAATTCACGTGTTCGGGACAGGGGATGTATCCCACCCGAGATCACAAAACATATATTGGAATTTACAGTGCTTAATGAAAGAAATGGAAGAAGATGGTTCCAAGCCGAATCCTGATTTCAGCTTGCACGACGTCGACGAGGAGCGAGAATGTGTTCCAATAGGACACAGTGAACTGTTGGCGATTTCATTCGGGCTGATTAGTACAGAAGCAGGAAGGACAATTCGTATTACAAAGAACCTTCGTGTATGTCATAGTTGTCATGAGTCGGCAAAGTTTATATCCAAGATGGTTGGCCGAGAAATCATAGTAAAAGATCCCTATGTATTCCATCATTTTAAAGATGGTTGCTGCTCTTGTGAAAACTTTTGTTAA

mRNA sequence

ATGAATCTTCTTCTCTCCACCCACACCCACTGTCTCCCCATTACCCAGAAACCCAATCACGCATACCATCGCCACCCACCATTTAATAATCTCCCTCATGTTCGTACTATGACTGTAGAGAATTATGCTAATTTATGCGTAGCCCACCAAGTGTTCGACGATATTCCTATATGGGATACTTTTGCATGGAACAATCTAATTCAAACCCATCTCACCAATGGAGATTTGGGGCATGTAATTTCAACCTATCGACAGATGTTATTTCGTGGAGTTCGTCCTGACAAACACACCCTTCCTCGAATTATATGTGCTACACGCCAGTATGGTGATCTACAGGTTGGCAAACAGCTCCACGCTCAAGCCTTCAAACTTGGGTTCTCCTCTAACCTTTATGTACTTACTTCCTTAATTGAGTTGTATGGGATTCTTGATAGTGCTGACACTGCAAAGTGGCTTCATGACAAGTCCACTTGTAGAAACTCTGTTTCTTGGACCGTTTTAGCTAAGCTGTACTTGAGGGAAGATAAACCCAGTCTTGCCCTAGACTTGTTTTACCAAATGGTGGAGTTGGCGGATGATATTGATGCAGTGGCTTTGGCCACGGCCATTGGTGCCTGTGGTGCTCTCAAAATGCTGCATCATGGGAGAAACATCCACCATCTTGCAAGAGTTCATGGCTTGGAATTTAATATATTGGTCAGTAATTCTCTATTGAAAATGTACATCGACTGTGATAGTATCAAAGATGCTCGGGGGTTCTTCGACCAAATGCCGTCCAAAGACATCATTTCCTGGACAGAACTTATCCATATGTACGTTAAGAAAGGTGGAATCAATGAGGCTTTTAAGCTGTTTCGACAAATGAATATGGATGGAGAATTGAAGCCTGATCCTCGTACAATCAGCAGCATTCTCCCAGCTTGTGGAAGAATGGCTGCACATAAGCATGGAAAAGAGATTCATGGATATGTGGTTAAAAATGCTTTTGACGAGAATCTCATCGTCCAAAATGCTTTGGTCGACATGTATGTCAAATCTGGATGTATACAATCTGCATCAAAAACTTTCTCGATGATGAAGGAGAAAGATATGGTTTCGTGGAGCATCATGACTTTGGGCTACAGCTTACATGGTCAAGGAAAACTGGGAGTCAGTTTGTTCCGTGAGATGGAGAAGAACTTTAAGATGCGTAGAGATGAGATCACTTACACTGCAGTTTTGCATGCTTGTACTACTGCAAACATGGTAGATGAAGGGGATTCTTACTTCAGTTGCATTACCAAGCCAACCGTGGCACACATTGCTCTAAAGGTGGCTCTTTTAGCTCGAGCGGGGAGACTGGATGAAGCTAGGACATTTGTAGAAAAAAAGAAACTTGATAAACATCCTGAGATTTTGAGAGCGTTGCTCGATGGATGCCGGAACCACCGTCAACAAAAACTAGGCAAGCGAATCATTGAGCAGCTGTGTGATTTGGAGCCTCTAAATGCTGAGAATTACATTCTACTTTCAAACTGGTATGCATGCAACGAAAAATGGGACATGGTTGAAAAGTTGAGAGAAACAATAAGAGACATGGGATTAAGACCCAAGAAGGCTTACAGTTGGATAGAGTTTTGCAACAAAATTCACGTGTTCGGGACAGGGGATGTATCCCACCCGAGATCACAAAACATATATTGGAATTTACAGTGCTTAATGAAAGAAATGGAAGAAGATGGTTCCAAGCCGAATCCTGATTTCAGCTTGCACGACGTCGACGAGGAGCGAGAATGTGTTCCAATAGGACACAGTGAACTGTTGGCGATTTCATTCGGGCTGATTAGTACAGAAGCAGGAAGGACAATTCGTATTACAAAGAACCTTCGTGTATGTCATAGTTGTCATGAGTCGGCAAAGTTTATATCCAAGATGGTTGGCCGAGAAATCATAGTAAAAGATCCCTATGTATTCCATCATTTTAAAGATGGTTGCTGCTCTTGTGAAAACTTTTGTTAA

Coding sequence (CDS)

ATGAATCTTCTTCTCTCCACCCACACCCACTGTCTCCCCATTACCCAGAAACCCAATCACGCATACCATCGCCACCCACCATTTAATAATCTCCCTCATGTTCGTACTATGACTGTAGAGAATTATGCTAATTTATGCGTAGCCCACCAAGTGTTCGACGATATTCCTATATGGGATACTTTTGCATGGAACAATCTAATTCAAACCCATCTCACCAATGGAGATTTGGGGCATGTAATTTCAACCTATCGACAGATGTTATTTCGTGGAGTTCGTCCTGACAAACACACCCTTCCTCGAATTATATGTGCTACACGCCAGTATGGTGATCTACAGGTTGGCAAACAGCTCCACGCTCAAGCCTTCAAACTTGGGTTCTCCTCTAACCTTTATGTACTTACTTCCTTAATTGAGTTGTATGGGATTCTTGATAGTGCTGACACTGCAAAGTGGCTTCATGACAAGTCCACTTGTAGAAACTCTGTTTCTTGGACCGTTTTAGCTAAGCTGTACTTGAGGGAAGATAAACCCAGTCTTGCCCTAGACTTGTTTTACCAAATGGTGGAGTTGGCGGATGATATTGATGCAGTGGCTTTGGCCACGGCCATTGGTGCCTGTGGTGCTCTCAAAATGCTGCATCATGGGAGAAACATCCACCATCTTGCAAGAGTTCATGGCTTGGAATTTAATATATTGGTCAGTAATTCTCTATTGAAAATGTACATCGACTGTGATAGTATCAAAGATGCTCGGGGGTTCTTCGACCAAATGCCGTCCAAAGACATCATTTCCTGGACAGAACTTATCCATATGTACGTTAAGAAAGGTGGAATCAATGAGGCTTTTAAGCTGTTTCGACAAATGAATATGGATGGAGAATTGAAGCCTGATCCTCGTACAATCAGCAGCATTCTCCCAGCTTGTGGAAGAATGGCTGCACATAAGCATGGAAAAGAGATTCATGGATATGTGGTTAAAAATGCTTTTGACGAGAATCTCATCGTCCAAAATGCTTTGGTCGACATGTATGTCAAATCTGGATGTATACAATCTGCATCAAAAACTTTCTCGATGATGAAGGAGAAAGATATGGTTTCGTGGAGCATCATGACTTTGGGCTACAGCTTACATGGTCAAGGAAAACTGGGAGTCAGTTTGTTCCGTGAGATGGAGAAGAACTTTAAGATGCGTAGAGATGAGATCACTTACACTGCAGTTTTGCATGCTTGTACTACTGCAAACATGGTAGATGAAGGGGATTCTTACTTCAGTTGCATTACCAAGCCAACCGTGGCACACATTGCTCTAAAGGTGGCTCTTTTAGCTCGAGCGGGGAGACTGGATGAAGCTAGGACATTTGTAGAAAAAaaGAAACTTGATAAACATCCTGAGATTTTGAGAGCGTTGCTCGATGGATGCCGGAACCACCGTCAACAAAAACTAGGCAAGCGAATCATTGAGCAGCTGTGTGATTTGGAGCCTCTAAATGCTGAGAATTACATTCTACTTTCAAACTGGTATGCATGCAACGAaaaaTGGGACATGGTTGAAAAGTTGAGAGAAACAATAAGAGACATGGGATTAAGACCCAAGAAGGCTTACAGTTGGATAGAGTTTTGCAACAAAATTCACGTGTTCGGGACAGGGGATGTATCCCACCCGAGATCACAAAACATATATTGGAATTTACAGTGCTTAATGAAAGAAATGGAAGAAGATGGTTCCAAGCCGAATCCTGATTTCAGCTTGCACGACGTCGACGAGGAGCGAGAATGTGTTCCAATAGGACACAGTGAACTGTTGGCGATTTCATTCGGGCTGATTAGTACAGAAGCAGGAAGGACAATTCGTATTACAAAGAACCTTCGTGTATGTCATAGTTGTCATGAGTCGGCAAAGTTTATATCCAAGATGGTTGGCCGAGAAATCATAGTAAAAGATCCCTATGTATTCCATCATTTTAAAGATGGTTGCTGCTCTTGTGAAAACTTTTGTTAA

Protein sequence

MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGDSYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCSCENFC*
BLAST of Cucsa.177160 vs. Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.4e-119
Identity = 232/623 (37.24%), Postives = 358/623 (57.46%), Query Frame = 1

Query: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107
           A +VFD++   D  +WN++I  +++NG     +S + QML  G+  D  T+  +      
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD 308

Query: 108 YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 167
              + +G+ +H+   K  FS       +L+++Y      D+AK +  + + R+ VS+T +
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 368

Query: 168 AKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGL 227
              Y RE     A+ LF +M E     D   +   +  C   ++L  G+ +H   + + L
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428

Query: 228 EFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQ 287
            F+I VSN+L+ MY  C S+++A   F +M  KDIISW  +I  Y K    NEA  LF  
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488

Query: 288 MNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSG 347
           +  +    PD RT++ +LPAC  ++A   G+EIHGY+++N +  +  V N+LVDMY K G
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548

Query: 348 CIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVL 407
            +  A   F  +  KD+VSW++M  GY +HG GK  ++LF +M +   +  DEI++ ++L
Sbjct: 549 ALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADEISFVSLL 608

Query: 408 HACTTANMVDEGDSYFS-----CITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKH 467
           +AC+ + +VDEG  +F+     C  +PTV H A  V +LAR G L +A  F+E   +   
Sbjct: 609 YACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPD 668

Query: 468 PEILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRET 527
             I  ALL GCR H   KL +++ E++ +LEP N   Y+L++N YA  EKW+ V++LR+ 
Sbjct: 669 ATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKR 728

Query: 528 IRDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFS 587
           I   GLR     SWIE   ++++F  GD S+P ++NI   L+ +   M E+G  P   ++
Sbjct: 729 IGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYA 788

Query: 588 LHDVDE-ERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGR 647
           L D +E E+E    GHSE LA++ G+IS+  G+ IR+TKNLRVC  CHE AKF+SK+  R
Sbjct: 789 LIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRR 848

Query: 648 EIIVKDPYVFHHFKDGCCSCENF 665
           EI+++D   FH FKDG CSC  F
Sbjct: 849 EIVLRDSNRFHQFKDGHCSCRGF 870


HSP 2 Score: 196.1 bits (497), Expect = 1.3e-48
Identity = 115/394 (29.19%), Postives = 192/394 (48.73%), Query Frame = 1

Query: 29  NNLPHVRTMTVENYANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLF 88
           +NL    ++   N  +L  A +VFD++ I     WN L+     +GD    I  +++M+ 
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188

Query: 89  RGVRPDKHTLPRIICATRQYGDLQV---GKQLHAQAFKLGFSSNLYVLTSLIELYGILDS 148
            GV  D +T     C ++ +  L+    G+QLH    K GF     V  SL+  Y     
Sbjct: 189 SGVEMDSYTFS---CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 248

Query: 149 ADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGA 208
            D+A+ + D+ T R+ +SW  +   Y+        L +F QM+    +ID   + +    
Sbjct: 249 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 308

Query: 209 CGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISW 268
           C   +++  GR +H +             N+LL MY  C  +  A+  F +M  + ++S+
Sbjct: 309 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 368

Query: 269 TELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVV 328
           T +I  Y ++G   EA KLF +M  +G + PD  T++++L  C R      GK +H ++ 
Sbjct: 369 TSMIAGYAREGLAGEAVKLFEEMEEEG-ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 428

Query: 329 KNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVS 388
           +N    ++ V NAL+DMY K G +Q A   FS M+ KD++SW+ +  GYS +      +S
Sbjct: 429 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 488

Query: 389 LFREMEKNFKMRRDEITYTAVLHACTTANMVDEG 420
           LF  + +  +   DE T   VL AC + +  D+G
Sbjct: 489 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518


HSP 3 Score: 110.5 bits (275), Expect = 7.0e-23
Identity = 63/232 (27.16%), Postives = 119/232 (51.29%), Query Frame = 1

Query: 193 DIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIKDARG 252
           DID   L + +  C   K L  G+ + +  R +G   +  + + L  MY +C  +K+A  
Sbjct: 91  DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150

Query: 253 FFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMA 312
            FD++  +  + W  L++   K G  + +  LF++M   G ++ D  T S +  +   + 
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYTFSCVSKSFSSLR 210

Query: 313 AHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTL 372
           +   G+++HG+++K+ F E   V N+LV  Y+K+  + SA K F  M E+D++SW+ +  
Sbjct: 211 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 270

Query: 373 GYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGDSYFS 425
           GY  +G  + G+S+F +M  +  +  D  T  +V   C  + ++  G +  S
Sbjct: 271 GYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGRAVHS 320

BLAST of Cucsa.177160 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.0e-111
Identity = 221/631 (35.02%), Postives = 350/631 (55.47%), Query Frame = 1

Query: 41  NYANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPR 100
           ++ ++  A QVFDD+P    F WN +I+ +  N      +  Y  M    V PD  T P 
Sbjct: 65  SFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPH 124

Query: 101 IICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTC-- 160
           ++ A      LQ+G+ +HAQ F+LGF ++++V   LI LY       +A+ + +      
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184

Query: 161 RNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNI 220
           R  VSWT +   Y +  +P  AL++F QM ++    D VAL + + A   L+ L  GR+I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244

Query: 221 HHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGI 280
           H      GLE    +  SL  MY  C  +  A+  FD+M S ++I W  +I  Y K G  
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304

Query: 281 NEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNA 340
            EA  +F +M ++ +++PD  +I+S + AC ++ + +  + ++ YV ++ + +++ + +A
Sbjct: 305 REAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 364

Query: 341 LVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRR 400
           L+DM+ K G ++ A   F    ++D+V WS M +GY LHG+ +  +SL+R ME+   +  
Sbjct: 365 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHP 424

Query: 401 DEITYTAVLHACTTANMVDEGDSYFSCIT----KPTVAHIALKVALLARAGRLDEARTFV 460
           +++T+  +L AC  + MV EG  +F+ +      P   H A  + LL RAG LD+A   +
Sbjct: 425 NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 484

Query: 461 EKKKLDKHPEILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWD 520
           +   +     +  ALL  C+ HR  +LG+   +QL  ++P N  +Y+ LSN YA    WD
Sbjct: 485 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 544

Query: 521 MVEKLRETIRDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDG 580
            V ++R  +++ GL      SW+E   ++  F  GD SHPR + I   ++ +   ++E G
Sbjct: 545 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 604

Query: 581 SKPNPDFSLHDV-DEERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAK 640
              N D SLHD+ DEE E     HSE +AI++GLIST  G  +RITKNLR C +CH + K
Sbjct: 605 FVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATK 664

Query: 641 FISKMVGREIIVKDPYVFHHFKDGCCSCENF 665
            ISK+V REI+V+D   FHHFKDG CSC ++
Sbjct: 665 LISKLVDREIVVRDTNRFHHFKDGVCSCGDY 693

BLAST of Cucsa.177160 vs. Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 4.9e-101
Identity = 220/675 (32.59%), Postives = 353/675 (52.30%), Query Frame = 1

Query: 36  TMTVENYANLCVAHQ---VFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVR 95
           ++ +  Y NL + H+   +F  +      AW ++I+           ++++ +M   G  
Sbjct: 43  SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC 102

Query: 96  PDKHTLPRIICATRQYGDLQVGKQLHAQAFKLGFSSNLYV-------------LTSLIEL 155
           PD +  P ++ +     DL+ G+ +H    +LG   +LY              + S I +
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162

Query: 156 YGILDSA-----------------------DTAKWLHDKSTCRNSVSWTVLAKLYLREDK 215
             + D                         D+ + + +    ++ VS+  +   Y +   
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222

Query: 216 PSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNS 275
              AL +  +M       D+  L++ +        +  G+ IH      G++ ++ + +S
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282

Query: 276 LLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKP 335
           L+ MY     I+D+   F ++  +D ISW  L+  YV+ G  NEA +LFRQM +  ++KP
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKP 342

Query: 336 DPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTF 395
                SS++PAC  +A    GK++HGYV++  F  N+ + +ALVDMY K G I++A K F
Sbjct: 343 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 402

Query: 396 SMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMV 455
             M   D VSW+ + +G++LHG G   VSLF EM++   ++ +++ + AVL AC+   +V
Sbjct: 403 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ-GVKPNQVAFVAVLTACSHVGLV 462

Query: 456 DEGDSYFSCITK-----PTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLD 515
           DE   YF+ +TK       + H A    LL RAG+L+EA  F+ K  ++    +   LL 
Sbjct: 463 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 522

Query: 516 GCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPK 575
            C  H+  +L +++ E++  ++  N   Y+L+ N YA N +W  + KLR  +R  GLR K
Sbjct: 523 SCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK 582

Query: 576 KAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEE-- 635
            A SWIE  NK H F +GD SHP    I   L+ +M++ME++G   +    LHDVDEE  
Sbjct: 583 PACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHK 642

Query: 636 RECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPY 665
           RE +  GHSE LA++FG+I+TE G TIR+TKN+R+C  CH + KFISK+  REIIV+D  
Sbjct: 643 RELL-FGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNS 702

BLAST of Cucsa.177160 vs. Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 4.9e-101
Identity = 224/619 (36.19%), Postives = 334/619 (53.96%), Query Frame = 1

Query: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107
           A  +FD +P  D  +WN +I  +  NG     +  +  M    V PD  TL  +I A   
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309

Query: 108 YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 167
            GD ++G+ +HA     GF+ ++ V  SL ++Y    S   A+ L  +   ++ VSWT +
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369

Query: 168 AKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGL 227
              Y     P  A+D +  M + +   D + +A  + AC  L  L  G  +H LA    L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429

Query: 228 EFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQ 287
              ++V+N+L+ MY  C  I  A   F  +P K++ISWT +I          EA    RQ
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489

Query: 288 MNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSG 347
           M M   L+P+  T+++ L AC R+ A   GKEIH +V++     +  + NAL+DMYV+ G
Sbjct: 490 MKM--TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG 549

Query: 348 CIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVL 407
            + +A   F+  K KD+ SW+I+  GYS  GQG + V LF  M K+ ++R DEIT+ ++L
Sbjct: 550 RMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKS-RVRPDEITFISLL 609

Query: 408 HACTTANMVDEGDSYFSCI----TKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHP 467
             C+ + MV +G  YFS +      P + H A  V LL RAG L EA  F++K  +   P
Sbjct: 610 CGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDP 669

Query: 468 EILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETI 527
            +  ALL+ CR H +  LG+   + + +L+  +   YILL N YA   KW  V K+R  +
Sbjct: 670 AVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMM 729

Query: 528 RDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDG-SKPNPDFS 587
           ++ GL      SW+E   K+H F + D  HP+++ I   L+   ++M E G +K +   S
Sbjct: 730 KENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSS 789

Query: 588 LHDVDEERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGRE 647
           + + +  R+ +  GHSE  AI+FGLI+T  G  I +TKNL +C +CH++ KFISK V RE
Sbjct: 790 MDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRRE 849

Query: 648 IIVKDPYVFHHFKDGCCSC 662
           I V+D   FHHFKDG CSC
Sbjct: 850 ISVRDAEHFHHFKDGECSC 864


HSP 2 Score: 182.2 bits (461), Expect = 1.9e-44
Identity = 124/424 (29.25%), Postives = 204/424 (48.11%), Query Frame = 1

Query: 42  YANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLF-RGVRPDKHTLPR 101
           + NL  A  VF  +   + F+WN L+  +   G     +  Y +ML+  GV+PD +T P 
Sbjct: 142 FGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPC 201

Query: 102 IICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRN 161
           ++       DL  GK++H    + G+  ++ V+ +LI +Y       +A+ L D+   R+
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261

Query: 162 SVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHH 221
            +SW  +   Y         L+LF+ M  L+ D D + L + I AC  L     GR+IH 
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321

Query: 222 LARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINE 281
                G   +I V NSL +MY++  S ++A   F +M  KDI+SWT +I  Y      ++
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381

Query: 282 AFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALV 341
           A   +R M+ D  +KPD  T++++L AC  +     G E+H   +K      +IV N L+
Sbjct: 382 AIDTYRMMDQD-SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 441

Query: 342 DMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDE 401
           +MY K  CI  A   F  +  K+++SW+ +  G  L+ +    +   R+M+    ++ + 
Sbjct: 442 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK--MTLQPNA 501

Query: 402 ITYTAVLHACTTANMVDEGDSYFSCITKPTVA-HIALKVALL---ARAGRLDEARTFVEK 461
           IT TA L AC     +  G    + + +  V     L  ALL    R GR++ A +    
Sbjct: 502 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS 561


HSP 3 Score: 161.0 bits (406), Expect = 4.5e-38
Identity = 103/358 (28.77%), Postives = 177/358 (49.44%), Query Frame = 1

Query: 64  NNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQAFK 123
           N+ +     NG L   +     M    V  D+     ++         + G ++++ A  
Sbjct: 63  NSQLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALS 122

Query: 124 LGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLALDL 183
              S  + +  + + ++    +   A ++  K + RN  SW VL   Y ++     A+ L
Sbjct: 123 SMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCL 182

Query: 184 FYQMVELAD-DIDAVALATAIGACGALKMLHHGRNIH-HLARVHGLEFNILVSNSLLKMY 243
           +++M+ +     D       +  CG +  L  G+ +H H+ R +G E +I V N+L+ MY
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMY 242

Query: 244 IDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTI 303
           + C  +K AR  FD+MP +DIISW  +I  Y + G  +E  +LF  M     + PD  T+
Sbjct: 243 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR-GLSVDPDLMTL 302

Query: 304 SSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKE 363
           +S++ AC  +   + G++IH YV+   F  ++ V N+L  MY+ +G  + A K FS M+ 
Sbjct: 303 TSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER 362

Query: 364 KDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEG 420
           KD+VSW+ M  GY  +      +  +R M+++  ++ DEIT  AVL AC T   +D G
Sbjct: 363 KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD-SVKPDEITVAAVLSACATLGDLDTG 417

BLAST of Cucsa.177160 vs. Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.2e-100
Identity = 219/624 (35.10%), Postives = 329/624 (52.72%), Query Frame = 1

Query: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRG-VRPDKHTLPRIICATR 107
           A +VFD +P  DT  WN +I  +  N      I  +R ++     R D  TL  I+ A  
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232

Query: 108 QYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTV 167
           +  +L++G Q+H+ A K G  S+ YVLT  I LY           L  +    + V++  
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292

Query: 168 LAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHG 227
           +   Y    +  L+L LF +++     + +  L + +   G L +++    IH       
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSN 352

Query: 228 LEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFR 287
              +  VS +L  +Y   + I+ AR  FD+ P K + SW  +I  Y + G   +A  LFR
Sbjct: 353 FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFR 412

Query: 288 QMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKS 347
           +M    E  P+P TI+ IL AC ++ A   GK +H  V    F+ ++ V  AL+ MY K 
Sbjct: 413 EMQKS-EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 472

Query: 348 GCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAV 407
           G I  A + F +M +K+ V+W+ M  GY LHGQG+  +++F EM  N  +    +T+  V
Sbjct: 473 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM-LNSGITPTPVTFLCV 532

Query: 408 LHACTTANMVDEGDSYFSCIT-----KPTVAHIALKVALLARAGRLDEARTFVEKKKLDK 467
           L+AC+ A +V EGD  F+ +      +P+V H A  V +L RAG L  A  F+E   ++ 
Sbjct: 533 LYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEP 592

Query: 468 HPEILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRE 527
              +   LL  CR H+   L + + E+L +L+P N   ++LLSN ++ +  +     +R+
Sbjct: 593 GSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQ 652

Query: 528 TIRDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDF 587
           T +   L     Y+ IE     HVF +GD SHP+ + IY  L+ L  +M E G +P  + 
Sbjct: 653 TAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETEL 712

Query: 588 SLHDV-DEERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVG 647
           +LHDV +EERE +   HSE LAI+FGLI+TE G  IRI KNLRVC  CH   K ISK+  
Sbjct: 713 ALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITE 772

Query: 648 REIIVKDPYVFHHFKDGCCSCENF 665
           R I+V+D   FHHFKDG CSC ++
Sbjct: 773 RVIVVRDANRFHHFKDGVCSCGDY 791


HSP 2 Score: 119.8 bits (299), Expect = 1.1e-25
Identity = 90/350 (25.71%), Postives = 164/350 (46.86%), Query Frame = 1

Query: 116 QLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLRED 175
           Q HAQ    GF +++ +LT L +    L +   A+ +       +   + VL + +   +
Sbjct: 38  QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 176 KPSLALDLFYQMVELAD-DIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVS 235
            P  +L +F  + +  D   ++   A AI A    +    GR IH  A V G +  +L+ 
Sbjct: 98  SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157

Query: 236 NSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGEL 295
           ++++KMY     ++DAR  FD+MP KD I W  +I  Y K     E+ ++FR +  +   
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 296 KPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASK 355
           + D  T+  ILPA   +   + G +IH    K     +  V    + +Y K G I+  S 
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277

Query: 356 TFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTAN 415
            F   ++ D+V+++ M  GY+ +G+ +L +SLF+E+  +    R   T  +++       
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS-TLVSLVPVSGHLM 337

Query: 416 MVDEGDSYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPE 465
           ++     Y  C+    ++H ++  AL     +L+E  +   +K  D+ PE
Sbjct: 338 LIYAIHGY--CLKSNFLSHASVSTALTTVYSKLNEIES--ARKLFDESPE 382

BLAST of Cucsa.177160 vs. TrEMBL
Match: A0A0A0L9N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G722890 PE=4 SV=1)

HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 623/624 (99.84%), Postives = 624/624 (100.00%), Query Frame = 1

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420
           EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420

Query: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480
           SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK
Sbjct: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540
           LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC
Sbjct: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540

Query: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600
           NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRITKNLRV 625
           LAISFGLISTEAGRTIRITKNLR+
Sbjct: 601 LAISFGLISTEAGRTIRITKNLRM 624

BLAST of Cucsa.177160 vs. TrEMBL
Match: A5AJ01_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011875 PE=4 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 6.2e-236
Identity = 407/664 (61.30%), Postives = 497/664 (74.85%), Query Frame = 1

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           M++L ST +  + + QK  +A H   P N    VR    +   +  + HQ+FD+IP+ +T
Sbjct: 96  MDVLSSTQSQSIFVKQKSTNATHCKNPSNLRSXVRMS--QKSIDFGLTHQLFDEIPVSNT 155

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGD G V+STYRQML RGVRPDKHT+PRI+ A R       GKQ+H  
Sbjct: 156 FAWNNLIQTHLTNGDSGRVVSTYRQMLLRGVRPDKHTIPRILTAARHTSSFSFGKQVHGH 215

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           A KLG SS  YV+++L+E+YG LD A+ AK +  KS  RNSVSWT++++LY+ EDKP LA
Sbjct: 216 ALKLGLSSESYVISALLEMYGRLDGABAAKLVFCKSARRNSVSWTLISRLYIMEDKPGLA 275

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           +D+F QMVE   +ID +AL TAI ACG LK L  G                       +M
Sbjct: 276 VDMFKQMVESKSEIDPLALVTAIVACGMLKSLPGG-----------------------EM 335

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           YIDC SIKDAR  FD+MPSKD+ISWTE+   YVK GG NE  KLFRQM+M+G +KPD   
Sbjct: 336 YIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEG-VKPDSLA 395

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGR AAHK GKEIH Y+++N  D N+ VQNA++DMYVKSG I+SA+K F+ MK
Sbjct: 396 ISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIFAGMK 455

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420
           ++D +SW++M LGYSLHGQG+LGV LFR+MEKN  +  D+I Y A LHACTTA +V++G 
Sbjct: 456 DRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVEQGR 515

Query: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480
            YF+CIT P   H AL VALL+R G  DEAR F+E+ KL+ H E+LRALLDGCR H   +
Sbjct: 516 FYFNCITAPKSRHYALMVALLSRVGLFDEARVFMEEHKLEGHVEVLRALLDGCRIHHNMR 575

Query: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540
             KR+IEQLCDL+ LNA+NY+LLSNWY+   KWDMV +LRETIRDMGL+P+KAYSWIEF 
Sbjct: 576 TAKRVIEQLCDLQTLNADNYVLLSNWYSSFAKWDMVNELRETIRDMGLKPRKAYSWIEFR 635

Query: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600
           NKIHVFGTGDVSHPRS+ IYW L  LMK++EE+G++ N DFSLHDVDEERECVPIGHSEL
Sbjct: 636 NKIHVFGTGDVSHPRSEKIYWELHSLMKKIEEEGTRLNLDFSLHDVDEERECVPIGHSEL 695

Query: 601 LAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCS 660
           LA SFGLIST+AG TIR+TKNLR+C +CH+SAK ISK+V REII+KDP  FHHFKDG CS
Sbjct: 696 LATSFGLISTQAGATIRVTKNLRMCGNCHDSAKAISKIVEREIIIKDPSCFHHFKDGFCS 733

Query: 661 CENF 665
           C +F
Sbjct: 756 CGDF 733

BLAST of Cucsa.177160 vs. TrEMBL
Match: M5XS66_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020455mg PE=4 SV=1)

HSP 1 Score: 810.1 bits (2091), Expect = 2.1e-231
Identity = 404/665 (60.75%), Postives = 500/665 (75.19%), Query Frame = 1

Query: 1   MNLLLSTHTHCLPITQKP-NHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWD 60
           M +L S     L +T+KP + A ++HP      + +T T      + V  ++ + +P  D
Sbjct: 1   MEVLASAQIQRLIVTEKPIDTAQYKHPR-----NSKTST-----RVAVTRKLLEKMPHSD 60

Query: 61  TFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHA 120
           TFAWN LIQTH+ N    + +STY QML RGVRPD+HTLPRI+ A+R   DL +GKQLH 
Sbjct: 61  TFAWNKLIQTHIANAHFDNALSTYHQMLLRGVRPDRHTLPRILSASRLSVDLPLGKQLHG 120

Query: 121 QAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSL 180
            A KLG S + YV+ +LIELYG L S D AK L DKS  ++SVSWT+LA+LY+ E KP +
Sbjct: 121 HALKLGCSDDRYVVAALIELYGRLHSVDAAKGLFDKSPVKDSVSWTMLARLYIMEGKPGM 180

Query: 181 ALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLK 240
           AL +F  MVE    ID VALATA GACG LK +  G+ +H +A+  GLEF++LVSN+LLK
Sbjct: 181 ALHVFDGMVESGAQIDPVALATAAGACGMLKSVIDGKKVHRVAKERGLEFDVLVSNTLLK 240

Query: 241 MYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPR 300
           MY+DC  + DA   FDQMPSKD+ISWT +IH  VK+GG NE  KLFRQM  DG  KPD  
Sbjct: 241 MYMDCGCVDDAWSVFDQMPSKDVISWTGMIHANVKRGGFNEGLKLFRQMIADGA-KPDSL 300

Query: 301 TISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMM 360
           ++SS+LPAC RM+A K GKEIHGY+++N    NL V NAL+DMYVKSG I+SASK F+ +
Sbjct: 301 SVSSVLPACARMSASKQGKEIHGYLIRNGIRMNLTVLNALMDMYVKSGFIESASKIFAGL 360

Query: 361 KEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEG 420
           K+KD+VSW++M LGYSLHGQG+LGV+LFR+ME +  ++ DE TY AVL AC  A MV+EG
Sbjct: 361 KDKDVVSWTVMILGYSLHGQGQLGVNLFRQMEDS-SIQIDEFTYAAVLRACVAALMVEEG 420

Query: 421 DSYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQ 480
             YF+CI  P VAH  L V LL+R G  D+A+ F+  KK++   E+LRALLDGCR H+Q 
Sbjct: 421 KFYFNCIKTPAVAHSVLLVTLLSRYGLFDDAKNFIADKKIEGDAEVLRALLDGCRIHQQS 480

Query: 481 KLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEF 540
           KLGKR+IEQLCDLEPLNA+NY+LLSNWYA   KWDMVE LR TI DMGL+ KKAY+W+E 
Sbjct: 481 KLGKRVIEQLCDLEPLNADNYVLLSNWYAHYAKWDMVEGLRGTIIDMGLKTKKAYTWMEL 540

Query: 541 CNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSE 600
            NK+HVFGTGDVSHPRSQ IYW LQ LM++ME++G + + DFS HDVDEEREC+PIGHSE
Sbjct: 541 RNKVHVFGTGDVSHPRSQGIYWELQGLMQKMEDEGHRRDSDFSFHDVDEERECIPIGHSE 600

Query: 601 LLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCC 660
           +LAISFGLIST+AG TIR+TKNLRVC +CH+SAK IS+MVGREII+KDP  FHHFKDG C
Sbjct: 601 MLAISFGLISTQAGSTIRVTKNLRVCRNCHDSAKIISQMVGREIILKDPNCFHHFKDGYC 653

Query: 661 SCENF 665
           SC +F
Sbjct: 661 SCGDF 653

BLAST of Cucsa.177160 vs. TrEMBL
Match: A0A061DP49_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_003517 PE=4 SV=1)

HSP 1 Score: 803.1 bits (2073), Expect = 2.5e-229
Identity = 400/643 (62.21%), Postives = 485/643 (75.43%), Query Frame = 1

Query: 25  HPPFNNL----PHVRTMTVENYANLCVAHQVFDDIPIW--DTFAWNNLIQTHLTNGDLGH 84
           H PFN      P  R     N   L + HQ+  +IP+   +TFAWN LIQTHL+N  L  
Sbjct: 11  HIPFNKPKCEHPPCRVSATLNLNKLALTHQLVLEIPLSTSNTFAWNQLIQTHLSNKQLQQ 70

Query: 85  VISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIE 144
           V+S Y  M+ RGVRPDKHTLPR++ A+R   +L  GKQ+HA AFKLGFSS+LYV+T+L+E
Sbjct: 71  VLSVYHGMMLRGVRPDKHTLPRVLTASRLCTNLAFGKQVHAHAFKLGFSSDLYVITALME 130

Query: 145 LYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVA 204
           +YG L   D AKW+ D +   NSV+WT+LAKL+L ++KP LA ++F QM+ L  DID V 
Sbjct: 131 MYGRLHGVDAAKWVLDNAPTTNSVAWTILAKLHLIDNKPHLAFEIFDQMLRLKADIDPVG 190

Query: 205 LATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMP 264
           LATAIGAC  LK L   RN H +AR  G EF++L+ NSLLKMYIDCDS+++AR FFD MP
Sbjct: 191 LATAIGACSLLKSLQQARNAHQIARDCGFEFHLLIGNSLLKMYIDCDSLEEARSFFDAMP 250

Query: 265 SKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGK 324
           SKD+ISWTE+I  YVKKGG NE  KLFR+M   G +KPD  TISSILPAC R+ AHK GK
Sbjct: 251 SKDVISWTEMIRGYVKKGGYNEGLKLFRRMIRAG-IKPDSLTISSILPACARVPAHKQGK 310

Query: 325 EIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHG 384
           E+H Y+ +N  D NL VQNA++DMYVKSG I+ AS  F  M E+D+VSW+IM LGYSLHG
Sbjct: 311 ELHAYLFRNGIDLNLTVQNAIMDMYVKSGFIELASTVFMCMMERDIVSWTIMILGYSLHG 370

Query: 385 QGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGDSYFSCITKPTVAHIALKV 444
           QG  G+ LF EMEK   +  DE TY AVLHAC TA  VD G  YF+ I  PTV H AL V
Sbjct: 371 QGGRGLDLFFEMEKESSLEIDEFTYAAVLHACVTACRVDVGMFYFNRIQAPTVIHCALMV 430

Query: 445 ALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAE 504
           ALLARAG  +EA  F+E+ ++    E+LRALLDGCR H+Q K+GK+I+EQLC+LEPLNAE
Sbjct: 431 ALLARAGLFNEAWAFIEEHQIVNDAEVLRALLDGCRIHQQLKIGKQIVEQLCELEPLNAE 490

Query: 505 NYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQN 564
           NY+LLSNWYA N KWDMV+KL+ TIRDMGL+PK+AYSWIEF NKIHVFGTGDVSHPRS+ 
Sbjct: 491 NYVLLSNWYADNAKWDMVDKLKITIRDMGLKPKRAYSWIEFRNKIHVFGTGDVSHPRSEI 550

Query: 565 IYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSELLAISFGLISTEAGRTIRI 624
           +Y  LQ LMK+ME++G +P+  FSLHDVDEEREC+ IGHSE+LAISFGLIST+   TIR+
Sbjct: 551 VYCQLQHLMKKMEDEGRRPSSVFSLHDVDEERECIHIGHSEMLAISFGLISTQGRETIRV 610

Query: 625 TKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCSC 662
           TKNLRVC SCH++AK ISK+V R+II+KDP  FHH +DG C C
Sbjct: 611 TKNLRVCRSCHDTAKVISKIVERKIIIKDPNCFHHIQDGVCLC 652

BLAST of Cucsa.177160 vs. TrEMBL
Match: W9RUH8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009366 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 1.2e-226
Identity = 389/625 (62.24%), Postives = 486/625 (77.76%), Query Frame = 1

Query: 43  ANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRII 102
           A+L  AH++FD++ + DTFAWN+LIQ++LT+ DL HV+ TY+QML RGV PD+HTLPR++
Sbjct: 52  ADLSPAHKMFDEMSLSDTFAWNSLIQSYLTSRDLHHVLFTYQQMLRRGVCPDRHTLPRVL 111

Query: 103 CATRQY-GDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLH-DKSTCRN 162
            A     G L VGKQ+H  A KLGFS + YV+++L+E+YG LD  D AK L  DKS   N
Sbjct: 112 AAVSGLSGGLFVGKQVHGHAIKLGFSHDQYVISALLEMYGKLDDIDRAKCLILDKSPRTN 171

Query: 163 SVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHH 222
           +VSWT+LA+LY+RE KPSLA+DLFYQM++   +ID+VALATAI A   LK L  GR +H 
Sbjct: 172 AVSWTLLARLYIREGKPSLAIDLFYQMLDSGAEIDSVALATAISAAAMLKSLKDGRILHQ 231

Query: 223 LARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINE 282
           +AR  GLEF +LVSNSLLKMYIDC SI+DAR  FD+MPS+DIISWTE+IH YVKKGG +E
Sbjct: 232 IARQRGLEFKVLVSNSLLKMYIDCGSIQDARAGFDRMPSRDIISWTEIIHAYVKKGGYSE 291

Query: 283 AFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALV 342
             KLFR+M  +G LKPDP +ISSILPAC R+ A+K GKEIHGY+++N  D NL V NAL+
Sbjct: 292 GLKLFRRMITNG-LKPDPFSISSILPACARVTANKQGKEIHGYLLRNRIDMNLTVLNALI 351

Query: 343 DMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFK-MRRD 402
           DMY KSGCI+ AS+ F+ +K KD++SW++M LGYSLHG+G L V L RE+E     +R D
Sbjct: 352 DMYAKSGCIELASRMFAQLKHKDVISWTVMILGYSLHGRGDLAVDLCRELENELSAVRLD 411

Query: 403 EITYTAVLHACTTANMVDEGDSYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKL 462
           ++ Y  VL AC++A  ++EG  YF+ I  P VAH AL V LLA A   DEA  F+++ K+
Sbjct: 412 QLRYADVLRACSSARKIEEGKFYFNRIKAPEVAHYALMVGLLANAALFDEAMLFIQENKI 471

Query: 463 DKHPEILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKL 522
           ++H E+LRALLDGCR HR+  LGKR+ EQL +LEPLNAENY+LLSNWYA N KWD+V K+
Sbjct: 472 ERHAEVLRALLDGCRIHRRTDLGKRVAEQLSELEPLNAENYVLLSNWYAHNGKWDLVNKM 531

Query: 523 RETIRDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNP 582
           R  I  M L+PKKAYSWIE  NK+HVF TGDVSHPRSQ IYW L+CLMK+MEE+G KPN 
Sbjct: 532 RGMIGGMDLKPKKAYSWIESRNKVHVFRTGDVSHPRSQGIYWELECLMKKMEEEGQKPNA 591

Query: 583 DFSLHDVDEERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMV 642
           D+SLHDVDEER+C+ +GHSE+LAISFGLIS++   T+R+TKN RVC  CHESAK IS +V
Sbjct: 592 DYSLHDVDEERDCIGVGHSEMLAISFGLISSKGSATVRVTKNHRVCRFCHESAKAISNIV 651

Query: 643 GREIIVKDPYVFHHFKDGCCSCENF 665
           GREII+KDP  FHHF+DG CSC +F
Sbjct: 652 GREIILKDPNRFHHFRDGLCSCGDF 675

BLAST of Cucsa.177160 vs. TAIR10
Match: AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 431.8 bits (1109), Expect = 7.7e-121
Identity = 232/623 (37.24%), Postives = 358/623 (57.46%), Query Frame = 1

Query: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107
           A +VFD++   D  +WN++I  +++NG     +S + QML  G+  D  T+  +      
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD 308

Query: 108 YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 167
              + +G+ +H+   K  FS       +L+++Y      D+AK +  + + R+ VS+T +
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 368

Query: 168 AKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGL 227
              Y RE     A+ LF +M E     D   +   +  C   ++L  G+ +H   + + L
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428

Query: 228 EFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQ 287
            F+I VSN+L+ MY  C S+++A   F +M  KDIISW  +I  Y K    NEA  LF  
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488

Query: 288 MNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSG 347
           +  +    PD RT++ +LPAC  ++A   G+EIHGY+++N +  +  V N+LVDMY K G
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548

Query: 348 CIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVL 407
            +  A   F  +  KD+VSW++M  GY +HG GK  ++LF +M +   +  DEI++ ++L
Sbjct: 549 ALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADEISFVSLL 608

Query: 408 HACTTANMVDEGDSYFS-----CITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKH 467
           +AC+ + +VDEG  +F+     C  +PTV H A  V +LAR G L +A  F+E   +   
Sbjct: 609 YACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPD 668

Query: 468 PEILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRET 527
             I  ALL GCR H   KL +++ E++ +LEP N   Y+L++N YA  EKW+ V++LR+ 
Sbjct: 669 ATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKR 728

Query: 528 IRDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFS 587
           I   GLR     SWIE   ++++F  GD S+P ++NI   L+ +   M E+G  P   ++
Sbjct: 729 IGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYA 788

Query: 588 LHDVDE-ERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGR 647
           L D +E E+E    GHSE LA++ G+IS+  G+ IR+TKNLRVC  CHE AKF+SK+  R
Sbjct: 789 LIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRR 848

Query: 648 EIIVKDPYVFHHFKDGCCSCENF 665
           EI+++D   FH FKDG CSC  F
Sbjct: 849 EIVLRDSNRFHQFKDGHCSCRGF 870


HSP 2 Score: 196.1 bits (497), Expect = 7.1e-50
Identity = 115/394 (29.19%), Postives = 192/394 (48.73%), Query Frame = 1

Query: 29  NNLPHVRTMTVENYANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLF 88
           +NL    ++   N  +L  A +VFD++ I     WN L+     +GD    I  +++M+ 
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188

Query: 89  RGVRPDKHTLPRIICATRQYGDLQV---GKQLHAQAFKLGFSSNLYVLTSLIELYGILDS 148
            GV  D +T     C ++ +  L+    G+QLH    K GF     V  SL+  Y     
Sbjct: 189 SGVEMDSYTFS---CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 248

Query: 149 ADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGA 208
            D+A+ + D+ T R+ +SW  +   Y+        L +F QM+    +ID   + +    
Sbjct: 249 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 308

Query: 209 CGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISW 268
           C   +++  GR +H +             N+LL MY  C  +  A+  F +M  + ++S+
Sbjct: 309 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 368

Query: 269 TELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVV 328
           T +I  Y ++G   EA KLF +M  +G + PD  T++++L  C R      GK +H ++ 
Sbjct: 369 TSMIAGYAREGLAGEAVKLFEEMEEEG-ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 428

Query: 329 KNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVS 388
           +N    ++ V NAL+DMY K G +Q A   FS M+ KD++SW+ +  GYS +      +S
Sbjct: 429 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 488

Query: 389 LFREMEKNFKMRRDEITYTAVLHACTTANMVDEG 420
           LF  + +  +   DE T   VL AC + +  D+G
Sbjct: 489 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518


HSP 3 Score: 110.5 bits (275), Expect = 3.9e-24
Identity = 63/232 (27.16%), Postives = 119/232 (51.29%), Query Frame = 1

Query: 193 DIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIKDARG 252
           DID   L + +  C   K L  G+ + +  R +G   +  + + L  MY +C  +K+A  
Sbjct: 91  DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150

Query: 253 FFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMA 312
            FD++  +  + W  L++   K G  + +  LF++M   G ++ D  T S +  +   + 
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYTFSCVSKSFSSLR 210

Query: 313 AHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTL 372
           +   G+++HG+++K+ F E   V N+LV  Y+K+  + SA K F  M E+D++SW+ +  
Sbjct: 211 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 270

Query: 373 GYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGDSYFS 425
           GY  +G  + G+S+F +M  +  +  D  T  +V   C  + ++  G +  S
Sbjct: 271 GYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGRAVHS 320

BLAST of Cucsa.177160 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)

HSP 1 Score: 405.6 bits (1041), Expect = 5.9e-113
Identity = 221/631 (35.02%), Postives = 350/631 (55.47%), Query Frame = 1

Query: 41  NYANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPR 100
           ++ ++  A QVFDD+P    F WN +I+ +  N      +  Y  M    V PD  T P 
Sbjct: 65  SFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPH 124

Query: 101 IICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTC-- 160
           ++ A      LQ+G+ +HAQ F+LGF ++++V   LI LY       +A+ + +      
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184

Query: 161 RNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNI 220
           R  VSWT +   Y +  +P  AL++F QM ++    D VAL + + A   L+ L  GR+I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244

Query: 221 HHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGI 280
           H      GLE    +  SL  MY  C  +  A+  FD+M S ++I W  +I  Y K G  
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304

Query: 281 NEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNA 340
            EA  +F +M ++ +++PD  +I+S + AC ++ + +  + ++ YV ++ + +++ + +A
Sbjct: 305 REAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 364

Query: 341 LVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRR 400
           L+DM+ K G ++ A   F    ++D+V WS M +GY LHG+ +  +SL+R ME+   +  
Sbjct: 365 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHP 424

Query: 401 DEITYTAVLHACTTANMVDEGDSYFSCIT----KPTVAHIALKVALLARAGRLDEARTFV 460
           +++T+  +L AC  + MV EG  +F+ +      P   H A  + LL RAG LD+A   +
Sbjct: 425 NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 484

Query: 461 EKKKLDKHPEILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWD 520
           +   +     +  ALL  C+ HR  +LG+   +QL  ++P N  +Y+ LSN YA    WD
Sbjct: 485 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 544

Query: 521 MVEKLRETIRDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDG 580
            V ++R  +++ GL      SW+E   ++  F  GD SHPR + I   ++ +   ++E G
Sbjct: 545 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 604

Query: 581 SKPNPDFSLHDV-DEERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAK 640
              N D SLHD+ DEE E     HSE +AI++GLIST  G  +RITKNLR C +CH + K
Sbjct: 605 FVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATK 664

Query: 641 FISKMVGREIIVKDPYVFHHFKDGCCSCENF 665
            ISK+V REI+V+D   FHHFKDG CSC ++
Sbjct: 665 LISKLVDREIVVRDTNRFHHFKDGVCSCGDY 693

BLAST of Cucsa.177160 vs. TAIR10
Match: AT3G23330.1 (AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 370.2 bits (949), Expect = 2.7e-102
Identity = 220/675 (32.59%), Postives = 353/675 (52.30%), Query Frame = 1

Query: 36  TMTVENYANLCVAHQ---VFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVR 95
           ++ +  Y NL + H+   +F  +      AW ++I+           ++++ +M   G  
Sbjct: 43  SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC 102

Query: 96  PDKHTLPRIICATRQYGDLQVGKQLHAQAFKLGFSSNLYV-------------LTSLIEL 155
           PD +  P ++ +     DL+ G+ +H    +LG   +LY              + S I +
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162

Query: 156 YGILDSA-----------------------DTAKWLHDKSTCRNSVSWTVLAKLYLREDK 215
             + D                         D+ + + +    ++ VS+  +   Y +   
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222

Query: 216 PSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNS 275
              AL +  +M       D+  L++ +        +  G+ IH      G++ ++ + +S
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282

Query: 276 LLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKP 335
           L+ MY     I+D+   F ++  +D ISW  L+  YV+ G  NEA +LFRQM +  ++KP
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKP 342

Query: 336 DPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTF 395
                SS++PAC  +A    GK++HGYV++  F  N+ + +ALVDMY K G I++A K F
Sbjct: 343 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 402

Query: 396 SMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMV 455
             M   D VSW+ + +G++LHG G   VSLF EM++   ++ +++ + AVL AC+   +V
Sbjct: 403 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ-GVKPNQVAFVAVLTACSHVGLV 462

Query: 456 DEGDSYFSCITK-----PTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLD 515
           DE   YF+ +TK       + H A    LL RAG+L+EA  F+ K  ++    +   LL 
Sbjct: 463 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 522

Query: 516 GCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPK 575
            C  H+  +L +++ E++  ++  N   Y+L+ N YA N +W  + KLR  +R  GLR K
Sbjct: 523 SCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK 582

Query: 576 KAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEE-- 635
            A SWIE  NK H F +GD SHP    I   L+ +M++ME++G   +    LHDVDEE  
Sbjct: 583 PACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHK 642

Query: 636 RECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPY 665
           RE +  GHSE LA++FG+I+TE G TIR+TKN+R+C  CH + KFISK+  REIIV+D  
Sbjct: 643 RELL-FGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNS 702

BLAST of Cucsa.177160 vs. TAIR10
Match: AT1G15510.1 (AT1G15510.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 370.2 bits (949), Expect = 2.7e-102
Identity = 224/619 (36.19%), Postives = 334/619 (53.96%), Query Frame = 1

Query: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107
           A  +FD +P  D  +WN +I  +  NG     +  +  M    V PD  TL  +I A   
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309

Query: 108 YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 167
            GD ++G+ +HA     GF+ ++ V  SL ++Y    S   A+ L  +   ++ VSWT +
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369

Query: 168 AKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGL 227
              Y     P  A+D +  M + +   D + +A  + AC  L  L  G  +H LA    L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429

Query: 228 EFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQ 287
              ++V+N+L+ MY  C  I  A   F  +P K++ISWT +I          EA    RQ
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489

Query: 288 MNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSG 347
           M M   L+P+  T+++ L AC R+ A   GKEIH +V++     +  + NAL+DMYV+ G
Sbjct: 490 MKM--TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG 549

Query: 348 CIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVL 407
            + +A   F+  K KD+ SW+I+  GYS  GQG + V LF  M K+ ++R DEIT+ ++L
Sbjct: 550 RMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKS-RVRPDEITFISLL 609

Query: 408 HACTTANMVDEGDSYFSCI----TKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHP 467
             C+ + MV +G  YFS +      P + H A  V LL RAG L EA  F++K  +   P
Sbjct: 610 CGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDP 669

Query: 468 EILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETI 527
            +  ALL+ CR H +  LG+   + + +L+  +   YILL N YA   KW  V K+R  +
Sbjct: 670 AVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMM 729

Query: 528 RDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDG-SKPNPDFS 587
           ++ GL      SW+E   K+H F + D  HP+++ I   L+   ++M E G +K +   S
Sbjct: 730 KENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSS 789

Query: 588 LHDVDEERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGRE 647
           + + +  R+ +  GHSE  AI+FGLI+T  G  I +TKNL +C +CH++ KFISK V RE
Sbjct: 790 MDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRRE 849

Query: 648 IIVKDPYVFHHFKDGCCSC 662
           I V+D   FHHFKDG CSC
Sbjct: 850 ISVRDAEHFHHFKDGECSC 864


HSP 2 Score: 182.2 bits (461), Expect = 1.1e-45
Identity = 124/424 (29.25%), Postives = 204/424 (48.11%), Query Frame = 1

Query: 42  YANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLF-RGVRPDKHTLPR 101
           + NL  A  VF  +   + F+WN L+  +   G     +  Y +ML+  GV+PD +T P 
Sbjct: 142 FGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPC 201

Query: 102 IICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRN 161
           ++       DL  GK++H    + G+  ++ V+ +LI +Y       +A+ L D+   R+
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261

Query: 162 SVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHH 221
            +SW  +   Y         L+LF+ M  L+ D D + L + I AC  L     GR+IH 
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321

Query: 222 LARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINE 281
                G   +I V NSL +MY++  S ++A   F +M  KDI+SWT +I  Y      ++
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381

Query: 282 AFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALV 341
           A   +R M+ D  +KPD  T++++L AC  +     G E+H   +K      +IV N L+
Sbjct: 382 AIDTYRMMDQD-SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 441

Query: 342 DMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDE 401
           +MY K  CI  A   F  +  K+++SW+ +  G  L+ +    +   R+M+    ++ + 
Sbjct: 442 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK--MTLQPNA 501

Query: 402 ITYTAVLHACTTANMVDEGDSYFSCITKPTVA-HIALKVALL---ARAGRLDEARTFVEK 461
           IT TA L AC     +  G    + + +  V     L  ALL    R GR++ A +    
Sbjct: 502 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS 561


HSP 3 Score: 161.0 bits (406), Expect = 2.5e-39
Identity = 103/358 (28.77%), Postives = 177/358 (49.44%), Query Frame = 1

Query: 64  NNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQAFK 123
           N+ +     NG L   +     M    V  D+     ++         + G ++++ A  
Sbjct: 63  NSQLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALS 122

Query: 124 LGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLALDL 183
              S  + +  + + ++    +   A ++  K + RN  SW VL   Y ++     A+ L
Sbjct: 123 SMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCL 182

Query: 184 FYQMVELAD-DIDAVALATAIGACGALKMLHHGRNIH-HLARVHGLEFNILVSNSLLKMY 243
           +++M+ +     D       +  CG +  L  G+ +H H+ R +G E +I V N+L+ MY
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMY 242

Query: 244 IDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTI 303
           + C  +K AR  FD+MP +DIISW  +I  Y + G  +E  +LF  M     + PD  T+
Sbjct: 243 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR-GLSVDPDLMTL 302

Query: 304 SSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKE 363
           +S++ AC  +   + G++IH YV+   F  ++ V N+L  MY+ +G  + A K FS M+ 
Sbjct: 303 TSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER 362

Query: 364 KDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEG 420
           KD+VSW+ M  GY  +      +  +R M+++  ++ DEIT  AVL AC T   +D G
Sbjct: 363 KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD-SVKPDEITVAAVLSACATLGDLDTG 417

BLAST of Cucsa.177160 vs. TAIR10
Match: AT4G30700.1 (AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 367.5 bits (942), Expect = 1.8e-101
Identity = 219/624 (35.10%), Postives = 329/624 (52.72%), Query Frame = 1

Query: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRG-VRPDKHTLPRIICATR 107
           A +VFD +P  DT  WN +I  +  N      I  +R ++     R D  TL  I+ A  
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232

Query: 108 QYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTV 167
           +  +L++G Q+H+ A K G  S+ YVLT  I LY           L  +    + V++  
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292

Query: 168 LAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHG 227
           +   Y    +  L+L LF +++     + +  L + +   G L +++    IH       
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSN 352

Query: 228 LEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFR 287
              +  VS +L  +Y   + I+ AR  FD+ P K + SW  +I  Y + G   +A  LFR
Sbjct: 353 FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFR 412

Query: 288 QMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKS 347
           +M    E  P+P TI+ IL AC ++ A   GK +H  V    F+ ++ V  AL+ MY K 
Sbjct: 413 EMQKS-EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 472

Query: 348 GCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAV 407
           G I  A + F +M +K+ V+W+ M  GY LHGQG+  +++F EM  N  +    +T+  V
Sbjct: 473 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM-LNSGITPTPVTFLCV 532

Query: 408 LHACTTANMVDEGDSYFSCIT-----KPTVAHIALKVALLARAGRLDEARTFVEKKKLDK 467
           L+AC+ A +V EGD  F+ +      +P+V H A  V +L RAG L  A  F+E   ++ 
Sbjct: 533 LYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEP 592

Query: 468 HPEILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRE 527
              +   LL  CR H+   L + + E+L +L+P N   ++LLSN ++ +  +     +R+
Sbjct: 593 GSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQ 652

Query: 528 TIRDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDF 587
           T +   L     Y+ IE     HVF +GD SHP+ + IY  L+ L  +M E G +P  + 
Sbjct: 653 TAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETEL 712

Query: 588 SLHDV-DEERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVG 647
           +LHDV +EERE +   HSE LAI+FGLI+TE G  IRI KNLRVC  CH   K ISK+  
Sbjct: 713 ALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITE 772

Query: 648 REIIVKDPYVFHHFKDGCCSCENF 665
           R I+V+D   FHHFKDG CSC ++
Sbjct: 773 RVIVVRDANRFHHFKDGVCSCGDY 791


HSP 2 Score: 119.8 bits (299), Expect = 6.5e-27
Identity = 90/350 (25.71%), Postives = 164/350 (46.86%), Query Frame = 1

Query: 116 QLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLRED 175
           Q HAQ    GF +++ +LT L +    L +   A+ +       +   + VL + +   +
Sbjct: 38  QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 176 KPSLALDLFYQMVELAD-DIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVS 235
            P  +L +F  + +  D   ++   A AI A    +    GR IH  A V G +  +L+ 
Sbjct: 98  SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157

Query: 236 NSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGEL 295
           ++++KMY     ++DAR  FD+MP KD I W  +I  Y K     E+ ++FR +  +   
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 296 KPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASK 355
           + D  T+  ILPA   +   + G +IH    K     +  V    + +Y K G I+  S 
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277

Query: 356 TFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTAN 415
            F   ++ D+V+++ M  GY+ +G+ +L +SLF+E+  +    R   T  +++       
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS-TLVSLVPVSGHLM 337

Query: 416 MVDEGDSYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPE 465
           ++     Y  C+    ++H ++  AL     +L+E  +   +K  D+ PE
Sbjct: 338 LIYAIHGY--CLKSNFLSHASVSTALTTVYSKLNEIES--ARKLFDESPE 382

BLAST of Cucsa.177160 vs. NCBI nr
Match: gi|778682994|ref|XP_004137884.2| (PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 1376.3 bits (3561), Expect = 0.0e+00
Identity = 665/665 (100.00%), Postives = 665/665 (100.00%), Query Frame = 1

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420
           EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420

Query: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480
           SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK
Sbjct: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540
           LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC
Sbjct: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540

Query: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600
           NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCS 660
           LAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCS
Sbjct: 601 LAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCS 660

Query: 661 CENFC 666
           CENFC
Sbjct: 661 CENFC 665

BLAST of Cucsa.177160 vs. NCBI nr
Match: gi|659130420|ref|XP_008465161.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-like [Cucumis melo])

HSP 1 Score: 1322.4 bits (3421), Expect = 0.0e+00
Identity = 635/665 (95.49%), Postives = 650/665 (97.74%), Query Frame = 1

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           MNLLLSTHTHCLPITQKP HAYHRHPPFNNLPHVRT TVENYA+LCVAHQVFD+IPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPYHAYHRHPPFNNLPHVRTTTVENYADLCVAHQVFDEIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGD GHVIS YRQMLFRGVRPDKHTLPRIICATRQYGDL VGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDWGHVISIYRQMLFRGVRPDKHTLPRIICATRQYGDLPVGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLGFSS+LYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWT+LAKLYLREDKPS A
Sbjct: 121 AFKLGFSSDLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTILAKLYLREDKPSFA 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           +DLFYQMVELADDID+VALATAIGACGALKMLHHGRNIHHLAR+HGLEFNILVSNSLLKM
Sbjct: 181 IDLFYQMVELADDIDSVALATAIGACGALKMLHHGRNIHHLARIHGLEFNILVSNSLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           Y+DCDSIKDARGFFDQMPSKD+ISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDP T
Sbjct: 241 YLDCDSIKDARGFFDQMPSKDVISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGRMAAHKHGKEIHGYV+KN FDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVLKNGFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420
           EKDMVSWSIMTLGYSLHGQGKLGV LFREMEKN KM RDEITYTAVLHACTTANMVDEGD
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVGLFREMEKNLKMHRDEITYTAVLHACTTANMVDEGD 420

Query: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480
            YFS ITKPTVAHIALKVALLARAGRLDEARTFVEKKKL+KHPEILRALLDGCRNHRQQK
Sbjct: 421 FYFSRITKPTVAHIALKVALLARAGRLDEARTFVEKKKLNKHPEILRALLDGCRNHRQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540
           LGKRIIEQLCDLEPLN ENYILLSNWYACN+KWDMVE+LRETIRDMGLRPKKAYSWIEFC
Sbjct: 481 LGKRIIEQLCDLEPLNTENYILLSNWYACNKKWDMVEELRETIRDMGLRPKKAYSWIEFC 540

Query: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600
           NKIHVFGTGDVSHPRSQNIYWNLQCLMK+MEEDGSK NP+FSLHDVDEERECVPIGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKKMEEDGSKTNPEFSLHDVDEERECVPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCS 660
           LAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCS
Sbjct: 601 LAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCS 660

Query: 661 CENFC 666
           CENFC
Sbjct: 661 CENFC 665

BLAST of Cucsa.177160 vs. NCBI nr
Match: gi|700203537|gb|KGN58670.1| (hypothetical protein Csa_3G722890 [Cucumis sativus])

HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 623/624 (99.84%), Postives = 624/624 (100.00%), Query Frame = 1

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420
           EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420

Query: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480
           SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK
Sbjct: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480

Query: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540
           LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC
Sbjct: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540

Query: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600
           NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRITKNLRV 625
           LAISFGLISTEAGRTIRITKNLR+
Sbjct: 601 LAISFGLISTEAGRTIRITKNLRM 624

BLAST of Cucsa.177160 vs. NCBI nr
Match: gi|225441828|ref|XP_002278166.1| (PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Vitis vinifera])

HSP 1 Score: 865.5 bits (2235), Expect = 5.9e-248
Identity = 421/664 (63.40%), Postives = 515/664 (77.56%), Query Frame = 1

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           M++L ST +  + + QK  +A H   P N   HVR    +   +  + HQ+FD+IP+ +T
Sbjct: 1   MDVLSSTQSQSIFVKQKSTNATHCKNPSNLRSHVRMS--QKSIDFGLTHQLFDEIPVSNT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGD   V+STYRQML RGVRPDKHT+PRI+ A R       GKQ+H  
Sbjct: 61  FAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAARHTSSFSFGKQVHGH 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           A KLG SS  YV+++L+E+YG LD A+ AK +  KS  RNSVSWT++++LY+ EDKP LA
Sbjct: 121 ALKLGLSSESYVISALLEMYGRLDGANAAKLVFCKSARRNSVSWTLISRLYIMEDKPGLA 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           +D+F QMVE   +ID +AL TAI ACG LK L  GR +H +A+  GLE ++LVSNSLLKM
Sbjct: 181 VDMFKQMVESKSEIDPLALVTAIVACGMLKSLQEGRYVHEIAKKCGLEADVLVSNSLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           YIDC SIKDAR  FD+MPSKD+ISWTE+   YVK GG NE  KLFRQM+M+G +KPD   
Sbjct: 241 YIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEG-VKPDSLA 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGR AAHK GKEIH Y+++N  D N+ VQNA++DMYVKSG I+SA+K F+ MK
Sbjct: 301 ISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIFAGMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEGD 420
           ++D +SW++M LGYSLHGQG+LGV LFR+MEKN  +  D+I Y A LHACTTA +V++G 
Sbjct: 361 DRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVEQGR 420

Query: 421 SYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHRQQK 480
            YF+CIT P   H AL VALL+R G  DEAR F+E+ KL+ H E+LRALLDGCR H   +
Sbjct: 421 FYFNCITAPKSRHYALMVALLSRVGLFDEARVFMEEHKLEGHVEVLRALLDGCRIHHNMR 480

Query: 481 LGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWIEFC 540
             KR+IEQLCDL+ LNA+NY+LLSNWY+   KWDMV +LRETIRDMGL+P+KAYSWIEF 
Sbjct: 481 TAKRVIEQLCDLQTLNADNYVLLSNWYSSFAKWDMVNELRETIRDMGLKPRKAYSWIEFR 540

Query: 541 NKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGHSEL 600
           NKIHVFGTGDVSHPRS+ IYW L  LMK++EE+G++ N DFSLHDVDEERECVPIGHSEL
Sbjct: 541 NKIHVFGTGDVSHPRSEKIYWELHSLMKKIEEEGTRLNLDFSLHDVDEERECVPIGHSEL 600

Query: 601 LAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDGCCS 660
           LA SFGLIST+AG TIR+TKNLR+C +CH+SAK ISK+V REII+KDP  FHHFKDG CS
Sbjct: 601 LATSFGLISTQAGATIRVTKNLRMCGNCHDSAKAISKIVEREIIIKDPSCFHHFKDGFCS 660

Query: 661 CENF 665
           C +F
Sbjct: 661 CGDF 661

BLAST of Cucsa.177160 vs. NCBI nr
Match: gi|1009160317|ref|XP_015898285.1| (PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 851.3 bits (2198), Expect = 1.2e-243
Identity = 415/664 (62.50%), Postives = 515/664 (77.56%), Query Frame = 1

Query: 1   MNLLLSTHTHCLPITQKPNHAYHR--HPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIW 60
           M++L STH H    T  P+H  H+  H P+ +  + R         L + H  FD+IP+ 
Sbjct: 1   MDVLPSTHIHRFVSTVVPSHTPHQLNHSPYLHC-NTRVPVKLKSGELLLTHHAFDEIPVS 60

Query: 61  DTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLH 120
           DTFAWNNLIQTHLT+GD   V STY QML RGV PD+HTLPR++ A+R  G L +GKQLH
Sbjct: 61  DTFAWNNLIQTHLTHGDFQLVFSTYHQMLLRGVHPDRHTLPRVLAASRLSGYLFLGKQLH 120

Query: 121 AQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKST-CRNSVSWTVLAKLYLREDKP 180
            QA KLGFSS+ YV+T+L+E+YG LD+ DTA+WL DKS+  RNSVSWT+LAKLY+ E +P
Sbjct: 121 GQALKLGFSSDQYVVTALLEIYGRLDTVDTARWLLDKSSPSRNSVSWTLLAKLYIEEGQP 180

Query: 181 SLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSL 240
           S A+ LFYQM++   +ID+VALATAI AC +LK L  GR +H +AR  GLEF++LVSNSL
Sbjct: 181 SSAIHLFYQMLDFGAEIDSVALATAIVACASLKSLKQGRKVHQVARNCGLEFDVLVSNSL 240

Query: 241 LKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPD 300
           LKMYIDC SI++AR  FD MPSKDIISWT +IH YVKKGG NE  KLFRQM  DG LKPD
Sbjct: 241 LKMYIDCSSIQEARVIFDSMPSKDIISWTSIIHAYVKKGGFNEGLKLFRQMVKDG-LKPD 300

Query: 301 PRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFS 360
             +ISSILPAC R+ A+K G+EIHGY+++N  + N+ V NA++DMY KSGCI SASK F 
Sbjct: 301 QLSISSILPACARVTANKQGREIHGYLLRNGMELNVTVFNAVIDMYAKSGCINSASKMFR 360

Query: 361 MMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVD 420
            ++ KD+VSW+IM +GYSLHGQG LGV LF EMEK+  +  D++TY AVLHAC+TA +V+
Sbjct: 361 QLRWKDVVSWTIMIMGYSLHGQGDLGVDLFGEMEKDSSILIDQVTYGAVLHACSTARLVE 420

Query: 421 EGDSYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEILRALLDGCRNHR 480
           EG  YF+CI  P V H+AL VALLA +G  DEA  F++K+K++++ E+LR LL+GCR HR
Sbjct: 421 EGKFYFNCIMTPEVTHLALMVALLAHSGLFDEAMAFIKKQKVERNAEVLRPLLEGCRIHR 480

Query: 481 QQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRDMGLRPKKAYSWI 540
           ++ LGK ++EQLC+LE LN ENY+LLSNWYA N KW MV+KL  TI D+GL+ KKAYSWI
Sbjct: 481 KKNLGKWVVEQLCELESLNPENYVLLSNWYAVNAKWGMVDKLYGTIIDLGLKAKKAYSWI 540

Query: 541 EFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEEDGSKPNPDFSLHDVDEERECVPIGH 600
           E  NKIHVFGTGDVSHPRS+ IYW LQCLMK++E++G +P+ D+SLHDVDEEREC+ IGH
Sbjct: 541 ELRNKIHVFGTGDVSHPRSERIYWELQCLMKKIEDEGYRPSEDYSLHDVDEERECIQIGH 600

Query: 601 SELLAISFGLISTEAGRTIRITKNLRVCHSCHESAKFISKMVGREIIVKDPYVFHHFKDG 660
           SE+LA+SFGLIST  G TIR+TKNLRVC +CH+ AK ISK V REII+KDP  FHHF+DG
Sbjct: 601 SEMLALSFGLISTHIGSTIRVTKNLRVCRNCHDCAKIISKFVQREIILKDPNRFHHFQDG 660

Query: 661 CCSC 662
            CSC
Sbjct: 661 FCSC 662

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP320_ARATH1.4e-11937.24Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
PP224_ARATH1.0e-11135.02Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... [more]
PP251_ARATH4.9e-10132.59Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
PPR45_ARATH4.9e-10136.19Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... [more]
PP341_ARATH3.2e-10035.10Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0L9N4_CUCSA0.0e+0099.84Uncharacterized protein OS=Cucumis sativus GN=Csa_3G722890 PE=4 SV=1[more]
A5AJ01_VITVI6.2e-23661.30Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011875 PE=4 SV=1[more]
M5XS66_PRUPE2.1e-23160.75Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020455mg PE=4 SV=1[more]
A0A061DP49_THECC2.5e-22962.21Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_... [more]
W9RUH8_9ROSA1.2e-22662.24Uncharacterized protein OS=Morus notabilis GN=L484_009366 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G18750.17.7e-12137.24 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G12770.15.9e-11335.02 mitochondrial editing factor 22[more]
AT3G23330.12.7e-10232.59 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G15510.12.7e-10236.19 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G30700.11.8e-10135.10 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778682994|ref|XP_004137884.2|0.0e+00100.00PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like ... [more]
gi|659130420|ref|XP_008465161.1|0.0e+0095.49PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-... [more]
gi|700203537|gb|KGN58670.1|0.0e+0099.84hypothetical protein Csa_3G722890 [Cucumis sativus][more]
gi|225441828|ref|XP_002278166.1|5.9e-24863.40PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like ... [more]
gi|1009160317|ref|XP_015898285.1|1.2e-24362.50PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like ... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.177160.1Cucsa.177160.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 162..189
score: 0.0077coord: 337..363
score: 0.01coord: 365..393
score: 0.0097coord: 401..425
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 260..308
score: 5.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 335..365
score: 0.0029coord: 62..94
score: 0.0021coord: 263..297
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 160..190
score: 7.903coord: 332..366
score: 8.539coord: 261..295
score: 9.876coord: 399..433
score: 6.851coord: 230..260
score: 7.081coord: 496..530
score: 7.377coord: 297..331
score: 5.283coord: 59..93
score: 9.931coord: 195..229
score: 5
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 326..363
score: 5.9E-7coord: 264..288
score: 5.9E-7coord: 460..560
score: 5.9E-7coord: 62..93
score: 5.9E-7coord: 159..209
score: 5.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 48..537
score: 4.8E

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.177160Cucurbita pepo (Zucchini)cgycpeB0489
Cucsa.177160Melon (DHL92) v3.5.1cgymeB317