Cucsa.175430 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGCAAGCTCGTTCAATCGCGATAAGTTATACTTTGATTACCTAACAAACTTCCAATTCTCTCTGTTCTTTGTTGTTCATCGTCCAAAATGTCTTGCTGTGGCGGAAACTGTGGATGCGGCTCTGGCTGCAAGTGCGGAAATGGCTGTGGAGGGTGAGTAACCTCTCGCCAATTAACTCTTTTGAGTTTGATCGAGTGAAATTGCTTTTAGTTCGCGTATGATTTTGTGGAGAGCATGATCTCTCGAGAATCTGATCTTCTGTTTTCTTTTACATCGCTTTCGATTTCTTAATCTTCTACATATCTTTGTCCCTCGTTCGACGGCGATCCGATCACTTGCCGATTATCTTCATTCGTACGATCAAGGCGGATTTTCTTGTGAAGTTTCTGAAAATGACTACGGTGTTCATTTCACCCGAGGATAATCGCGATGATTCTGATGTTTTGATATTTTGTCATGCAGATGCAAGAGTTTCCCTGACTTGAGCTTCTCAGAGACCTCTGCTACGATCGACACTTTCGTAGTCGGTTTCGCTCCTCAGAAGATGTAAGTTTCTGCAATCAAGCCTAATTTTTCAAGAGAGGTTTCGGTATTTAGTGATGATTTTATTTAACAATATCGGCGTTTTCGATACCAGGTCCTACGAGGTAGCAGAGATGGGAGCCGAGAACGGCTGCAAGTGCGGTGACAACTGCACCTGCGATCCATGCACCTGTAAATGAGCAGCAGCAGCATCAAGAGCAGCTCGAACCGTCTCAGGTGGAGATTATGTTCGAGTACTAATAGTATGCATCCATCTTAATAACAATTATAAAATCTCCAAGCGCTTTCGTTCTCCGTTGTGTTGCGTCTTTTTAAGTGTCGATTGTAGCGTTCCTTTTGAATAATAGCAGTCATGGAGTTGTGGAAAAACTTTATATGCTGTTGTTATAAAGGTTCAGTCAGTGATCTTTTTAGCTGAAGATTCCTGTGTTCATCCATGTCTGTTTAGTATTTGCTTCTCTCTCTGTAAGAAATTTAAGAAATAGTACGTGCTAATTTGAGAGATTACAGAGTTTCTTTCATCATCAATATCTAATCTATGGTTGAAAATGATGAAAAATCTTGACGTGATAAATATCTCCAAATCTCGATCTCAATCATTATCCTGAATTTTAATATTTGGAAATGAAGAACAGAATTCTCACATTTTCGGTGGTGGGGACGATTGAATAGTTAAGCAGCACCATTCGTTCTAAATCGATGTATATCCATCCAAAAAaTTAAATGCGTATTTGCGTGTCCTTGTAGAATCTTTCCTCTGATGGCCGAACTTTTTAATGGTTAATAGTTTTGAAAATTGATCAATTTTTTCTGTCTAGTTTTGTCCTCTTGCTTTTAAGGATTTGGTTAGCACATCGTTGTTTCTTTATTGAAGATTTGAAGTATTTCTCCGTTTTTGTTAAACTTATCGTTACCAAACACTGAGTCGGTGTATATAGAGATCAATTTTTTCTTCTCATCCTTTTTCTTTAAATGGACGTTTTTAAATATAATCAAAATATCATCCCAGTATATAGTTTAAACAATTTCACTAAACTTAATCGGAGTTTGAAATCTGAATCTTAACCTTAGAACTGAAATCCAACAAAGAATTTTGCCAAGTGCGCGGTGTAGCGTTTTCACAGAATCAACGGACAGTTTTTTCCGATCATTGATCTCGGAATCGGATTAACTTTTCTGATCATCATTCTTAGAATCTTTCCACATTAAGATCAAACACAACGGAGAGAAAGCTATGAGAAAACTATTTTTGATTTGTAAGACATACCGCTGATTCTGGTTGAATGTGTTGTGGAAAATATCACATTCTTTGCAAACTTATATTTACTTCAACGCATATAGTCGCAACAAAAACGAACAAGAT TTGCAAGCTCGTTCAATCGCGATAAGTTATACTTTGATTACCTAACAAACTTCCAATTCTCTCTGTTCTTTGTTGTTCATCGTCCAAAATGTCTTGCTGTGGCGGAAACTGTGGATGCGGCTCTGGCTGCAAGTGCGGAAATGGCTGTGGAGGGCGGATTTTCTTATGCAAGAGTTTCCCTGACTTGAGCTTCTCAGAGACCTCTGCTACGATCGACACTTTCGTAGTCGGTTTCGCTCCTCAGAAGATGTCCTACGAGGTAGCAGAGATGGGAGCCGAGAACGGCTGCAAGTGCGGTGACAACTGCACCTGCGATCCATGCACCTGTAAATGAGCAGCAGCAGCATCAAGAGCAGCTCGAACCGTCTCAGGTGGAGATTATGTTCGAGTACTAATAGTATGCATCCATCTTAATAACAATTATAAAATCTCCAAGCGCTTTCGTTCTCCGTTGTGTTGCGTCTTTTTAAGTGTCGATTGTAGCGTTCCTTTTGAATAATAGCAGTCATGGAGTTGTGGAAAAACTTTATATGCTGTTGTTATAAAGGTTCAGTCAGTGATCTTTTTAGCTGAAGATTCCTGTGTTCATCCATGTCTGTTTAGTATTTGCTTCTCTCTCTGTAAGAAATTTAAGAAATAGTACGTGCTAATTTGAGAGATTACAGAGTTTCTTTCATCATCAATATCTAATCTATGGTTGAAAATGATGAAAAATCTTGACGTGATAAATATCTCCAAATCTCGATCTCAATCATTATCCTGAATTTTAATATTTGGAAATGAAGAACAGAATTCTCACATTTTCGGTGGTGGGGACGATTGAATAGTTAAGCAGCACCATTCGTTCTAAATCGATGTATATCCATCCAAAAAATTAAATGCGTATTTGCGTGTCCTTGTAGAATCTTTCCTCTGATGGCCGAACTTTTTAATGGTTAATAGTTTTGAAAATTGATCAATTTTTTCTGTCTAGTTTTGTCCTCTTGCTTTTAAGGATTTGGTTAGCACATCGTTGTTTCTTTATTGAAGATTTGAAGTATTTCTCCGTTTTTGTTAAACTTATCGTTACCAAACACTGAGTCGGTGTATATAGAGATCAATTTTTTCTTCTCATCCTTTTTCTTTAAATGGACGTTTTTAAATATAATCAAAATATCATCCCAGTATATAGTTTAAACAATTTCACTAAACTTAATCGGAGTTTGAAATCTGAATCTTAACCTTAGAACTGAAATCCAACAAAGAATTTTGCCAAGTGCGCGGTGTAGCGTTTTCACAGAATCAACGGACAGTTTTTTCCGATCATTGATCTCGGAATCGGATTAACTTTTCTGATCATCATTCTTAGAATCTTTCCACATTAAGATCAAACACAACGGAGAGAAAGCTATGAGAAAACTATTTTTGATTTGTAAGACATACCGCTGATTCTGGTTGAATGTGTTGTGGAAAATATCACATTCTTTGCAAACTTATATTTACTTCAACGCATATAGTCGCAACAAAAACGAACAAGAT ATGTCTTGCTGTGGCGGAAACTGTGGATGCGGCTCTGGCTGCAAGTGCGGAAATGGCTGTGGAGGGCGGATTTTCTTATGCAAGAGTTTCCCTGACTTGAGCTTCTCAGAGACCTCTGCTACGATCGACACTTTCGTAGTCGGTTTCGCTCCTCAGAAGATGTCCTACGAGGTAGCAGAGATGGGAGCCGAGAACGGCTGCAAGTGCGGTGACAACTGCACCTGCGATCCATGCACCTGTAAATGA MSCCGGNCGCGSGCKCGNGCGGRIFLCKSFPDLSFSETSATIDTFVVGFAPQKMSYEVAEMGAENGCKCGDNCTCDPCTCK*
BLAST of Cucsa.175430 vs. Swiss-Prot
Match: MT2_RICCO (Metallothionein-like protein type 2 OS=Ricinus communis GN=MTI PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 3.4e-28 Identity = 55/85 (64.71%), Postives = 63/85 (74.12%), Query Frame = 1
BLAST of Cucsa.175430 vs. Swiss-Prot
Match: MT2B_SOLLC (Metallothionein-like protein type 2 B OS=Solanum lycopersicum GN=MTB PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 3.4e-28 Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 1
BLAST of Cucsa.175430 vs. Swiss-Prot
Match: MT2_VICFA (Metallothionein-like protein type 2 OS=Vicia faba GN=MTI PE=2 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.2e-27 Identity = 54/82 (65.85%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of Cucsa.175430 vs. Swiss-Prot
Match: MT2_ACTDE (Metallothionein-like protein type 2 OS=Actinidia deliciosa GN=pKIWI504 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.1e-26 Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 1
BLAST of Cucsa.175430 vs. Swiss-Prot
Match: MT2_TRIRP (Metallothionein-like protein 2 OS=Trifolium repens GN=MT1A PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.4e-26 Identity = 55/82 (67.07%), Postives = 61/82 (74.39%), Query Frame = 1
BLAST of Cucsa.175430 vs. TrEMBL
Match: A0A0A0LAK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G734260 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 9.2e-41 Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 1
BLAST of Cucsa.175430 vs. TrEMBL
Match: Q6I674_CITLA (Type-2 metallothionein OS=Citrullus lanatus GN=CLMT2 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 8.0e-37 Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 1
BLAST of Cucsa.175430 vs. TrEMBL
Match: A1Z0N9_9ROSI (Metallothionein-like protein MT2A OS=Salix matsudana PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 2.3e-28 Identity = 61/84 (72.62%), Postives = 68/84 (80.95%), Query Frame = 1
BLAST of Cucsa.175430 vs. TrEMBL
Match: A9UFY1_VITVI (Metallothionein OS=Vitis vinifera GN=MT PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 6.8e-28 Identity = 56/83 (67.47%), Postives = 64/83 (77.11%), Query Frame = 1
BLAST of Cucsa.175430 vs. TrEMBL
Match: J7HBR0_9AQUA (Metallothionein type 2 OS=Ilex paraguariensis PE=2 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 8.9e-28 Identity = 58/83 (69.88%), Postives = 65/83 (78.31%), Query Frame = 1
BLAST of Cucsa.175430 vs. TAIR10
Match: AT3G09390.1 (AT3G09390.1 metallothionein 2A) HSP 1 Score: 116.7 bits (291), Expect = 6.7e-27 Identity = 54/85 (63.53%), Postives = 60/85 (70.59%), Query Frame = 1
BLAST of Cucsa.175430 vs. TAIR10
Match: AT5G02380.1 (AT5G02380.1 metallothionein 2B) HSP 1 Score: 97.4 bits (241), Expect = 4.2e-21 Identity = 50/85 (58.82%), Postives = 58/85 (68.24%), Query Frame = 1
BLAST of Cucsa.175430 vs. NCBI nr
Match: gi|449440040|ref|XP_004137793.1| (PREDICTED: metallothionein-like protein type 2 [Cucumis sativus]) HSP 1 Score: 173.7 bits (439), Expect = 1.3e-40 Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 1
BLAST of Cucsa.175430 vs. NCBI nr
Match: gi|659083808|ref|XP_008442554.1| (PREDICTED: metallothionein-like protein type 2 [Cucumis melo]) HSP 1 Score: 170.2 bits (430), Expect = 1.5e-39 Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 1
BLAST of Cucsa.175430 vs. NCBI nr
Match: gi|49532940|dbj|BAD26571.1| (type-2 metallothionein [Citrullus lanatus]) HSP 1 Score: 160.6 bits (405), Expect = 1.2e-36 Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 1
BLAST of Cucsa.175430 vs. NCBI nr
Match: gi|747061965|ref|XP_011077472.1| (PREDICTED: metallothionein-like protein type 2 [Sesamum indicum]) HSP 1 Score: 133.7 bits (335), Expect = 1.5e-28 Identity = 59/84 (70.24%), Postives = 65/84 (77.38%), Query Frame = 1
BLAST of Cucsa.175430 vs. NCBI nr
Match: gi|120431594|gb|ABM21761.1| (metallothionein-like protein MT2A [Salix matsudana]) HSP 1 Score: 132.5 bits (332), Expect = 3.4e-28 Identity = 61/84 (72.62%), Postives = 68/84 (80.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |