Cucsa.168250 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.168250
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
Description40S ribosomal protein S3a
Locationscaffold01160 : 17368 .. 20433 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGGGGACAGCCGTTTCTCTCTCGCTTGTTTTTCATCCTCTGGAGCTGCTCCAAGCTTCTCAACTACTTCACAACCATGGCTGTCGGGTACCCTTCCTCTCTCCCTTTCTTCTCCCCATTACTTTCCCTTTACTCTCTTCACTGATGCAACTCTTTTTtCTTCTCCTTGCAGCAAAAACAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAGACGTACGTATCTTCTTCCATTCCATTGAAATTTCTTATATCAGATCTGGGTGTCGTCTTATATTCGGTTCTTGTTTATTTCAATTCTTCTCTTTTAGTTAATAATAATGCTCTATTGATGGATTTATTAATTTGGTTTTGTTTCTGTATGGGTTCTTTAGTGTCGACCCATTTGCAAAGAAGGATTGGTATGATATCAAGGCACCCTCTGTGTTCACTGTCAAGAACGTTGGAAAGACTCTTGTTACCCGTACCCAGGGAACCAAGGTAGATTCTTCATTGTTATTGCTCCCTTCAGCTGTAGTTTCTTTACTTTTATTTGCTTATGCCATTGTCTTTCTATATACTTTTGCTGTATTTTGCTATCTTCGTGTGGAAGATGCTCTCTTGTTTGTAGAATGGTCACTATGTTTTACGAAGATATCTTAGTGTATATCTGGGAGTGATTTTATCATATTGAAAATTACCTCGATATACAATTTTACCCTTCTAAACGCAATTTTCTCGTCATTAAAATTTATTTTAAATGATTAAAGAGGTGATTTATAGTGGTTTTGAAAACCACAAAATTGATTGTAACAATTTCAAGATACTCTCAAACATGCCCTTAATGGGGTGTTTGCCTAATATTTTCACCGCTCAGCATGTTCTTGAGTGACTACCTTAATAGCAAAAATGACATTGTTTATTTAGCTGTAATGTGGTTTCGAGACATCTATTTGGTTGTATTAATTTTAATCGTTCCATATAGATATGATGCGGTGTTAGTAAAGTCACTCATTTTGTAGATTAGAAGTGGCATTTTATTATTCTATACACACACAGCCTTTGAAATCCTTTGTAGGATTATATTTATTTATTTTTtATAGGATTCTAGGATTACACTTAATAGTAGGTCAGGTTAATTTTTACCTTTAGCAATGCATGAAACATTCTGAAATGTATGGTTATACTTGTAGATTGATATGGCAATTATTTTtCTTTGTGGTTTGGTACTGTTATTTCTCGTCTGTCTTTTATCAGTAACTAATAATAATTGTTATATCAACAGATTGCTTCTGAAGGGCTTAAACATAGAGTGTTTGAGGTATCACTCGCTGATCTTCAAGAAGATGAAGAGCACGCCTACAGAAAGATTAGATTGAGAGCTGAAGATGTTCAAGGAAGAAACGTTCTGACTAATTTCTGGGTATGGAATGGATGAGTTGCCTTTCATATATATTTGGATGGATGTCACACGCTTCAAATAGAAAAGTTTATTAGAATGACATTGACTGCCTTTATCATTTTGAGAATGGTCCATAAAAaGATTTTTTATGGCTCACAAGCGTTCTGCCTTCCATTGTTCTACAGGGAATGAATTTCACTACAGACAAATTAAGGTCATTGGTAAGGAAGTGGCATACGTTGATTGAAGCCCATGTGGATGTTAAGACCACAGACAATTACACTCTGAGGATGTTTTGCATTGGGTTTACAAAGAGACGTCCAAATCAAGTCAAAAGGACCTGCTATGCGCAATCCAGTCAGATCAGACAGGTGACTGCTCTTTTTTTTTtGTTGTCTTCCTGAAAAGATTTTACTGATGATCTGAATCTCTATATTGGATTTACTATGAAGGATATTATTGAATATAAAAGTTATGGATGAATTGAAAGCCTTGTAGACAACTATTTATCTTAACAATGGTCGCATGCATGGGAGAATACTGGAACAATGTTTTTGTTAGTGCAATGACAATAGACACCTTGCACATTCTGCTTCATTTTAACATTCTGCTTCATTTTAACCTTTCTTAAAATCGAAGTTTAGGATTAATGTGTATTTTCTTGACTCTTAAATATTGTTCACCCCGTACTATTGGTTACTTCAATTTTAATTATCTGAAATGTTATTTTATACTATTAACTTATATTGGACAATTGGTTATGCCAATCAAATACTATGCCCTTTGTCTGAGTTAGTGTTTTATTTCCTCTAGAAAAATGTTTGTGCATCGTGTCTGATTTTGAAGGACATGGGGATGAGATTGAGATTTGCAACTTTTTATATTCCTGGCAATCTGTTACTGTTTGTAAACATTTGTTTGTAATTACAGATTCGTAGGAAGATGAGGGAGATAATGGTCAACCAAGCAACATCATGCGATTTGAAAGAGTTGGTTCGTAAGTTCATACCTGAATCAATTGGAAAGGATATCGAGAAGGCTACATCTAGCATATACCCTCTACAGAATGTTTTCATCCGGAAGGTCAAGATCTTGAAAGCTCCCAAGTTTGATCTTGGAAAGTTGATGGAGGTATACAACTATTTACGTGTGCTTGTTAACTATCTATTTCGACCATAATTTGAAGATTCATTATCAAATCTGCTTGTCATCTTTTTtCTTGTTCTGAATATAGTTCTTAGGTAGGTGTCAATCGAGGCTGTTTAATTGGTTGCAATGATATTTATCAACCTTTTTGGTTGTCTATCTATAGGTTCATGGTGATTATTCGGAAGATGTTGGCGTCAAGGTAGACAGGCCTGCGGAAGAAGCCGTTGAAGGTGCTACTGAAGTTGTCGGTGCTTGAAAATGGAATCATGAATCAACTTTCTTATATTTACGAATGAACTGTGGCTTTTAATTTTTtAAAATTTTCTATTTTTAGTTAGTCTTGTTATGTTTCTGCCAAGTTGAGAAATCAGAGATATTCAGCGATTTTGACTATGAAAATACTTGCCGCTTTTTAGTTATGCATTGTTCCTTGGGACCATTTGAATACACATATTAAGCGCTCTCGTCTTGTTTTATCAACTTGAAAACTTGTTATTAAGTCATTTTGAAATGTGTCTTTACTGCAACTACG

mRNA sequence

TCGGGGACAGCCGTTTCTCTCTCGCTTGTTTTTCATCCTCTGGAGCTGCTCCAAGCTTCTCAACTACTTCACAACCATGGCTGTCGGCAAAAACAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAGACTGTCGACCCATTTGCAAAGAAGGATTGGTATGATATCAAGGCACCCTCTGTGTTCACTGTCAAGAACGTTGGAAAGACTCTTGTTACCCGTACCCAGGGAACCAAGATTGCTTCTGAAGGGCTTAAACATAGAGTGTTTGAGGTATCACTCGCTGATCTTCAAGAAGATGAAGAGCACGCCTACAGAAAGATTAGATTGAGAGCTGAAGATGTTCAAGGAAGAAACGTTCTGACTAATTTCTGGGGAATGAATTTCACTACAGACAAATTAAGGTCATTGGTAAGGAAGTGGCATACGTTGATTGAAGCCCATGTGGATGTTAAGACCACAGACAATTACACTCTGAGGATGTTTTGCATTGGGTTTACAAAGAGACGTCCAAATCAAGTCAAAAGGACCTGCTATGCGCAATCCAGTCAGATCAGACAGATTCGTAGGAAGATGAGGGAGATAATGGTCAACCAAGCAACATCATGCGATTTGAAAGAGTTGGTTCGTAAGTTCATACCTGAATCAATTGGAAAGGATATCGAGAAGGCTACATCTAGCATATACCCTCTACAGAATGTTTTCATCCGGAAGGTCAAGATCTTGAAAGCTCCCAAGTTTGATCTTGGAAAGTTGATGGAGGTTCATGGTGATTATTCGGAAGATGTTGGCGTCAAGGTAGACAGGCCTGCGGAAGAAGCCGTTGAAGGTGCTACTGAAGTTGTCGGTGCTTGAAAATGGAATCATGAATCAACTTTCTTATATTTACGAATGAACTGTGGCttttaattttttaaaattttctatttttaGTTAGTCTTGTTATGTTTCTGCCAAGTTGAGAAATCAGAGATATTCAGCGATTTTGACTATGAAAATACTTGCCGCTTTTTAGTTATGCATTGTTCCTTGGGACCATTTGAATACACATATTAAGCGCTCTCGTCTTGTTTTATCAACTTGAAAACTTGTTATTAAGTCATTTTGAAATGTGTCTTTACTGCAACTACG

Coding sequence (CDS)

ATGGCTGTCGGCAAAAACAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAGACTGTCGACCCATTTGCAAAGAAGGATTGGTATGATATCAAGGCACCCTCTGTGTTCACTGTCAAGAACGTTGGAAAGACTCTTGTTACCCGTACCCAGGGAACCAAGATTGCTTCTGAAGGGCTTAAACATAGAGTGTTTGAGGTATCACTCGCTGATCTTCAAGAAGATGAAGAGCACGCCTACAGAAAGATTAGATTGAGAGCTGAAGATGTTCAAGGAAGAAACGTTCTGACTAATTTCTGGGGAATGAATTTCACTACAGACAAATTAAGGTCATTGGTAAGGAAGTGGCATACGTTGATTGAAGCCCATGTGGATGTTAAGACCACAGACAATTACACTCTGAGGATGTTTTGCATTGGGTTTACAAAGAGACGTCCAAATCAAGTCAAAAGGACCTGCTATGCGCAATCCAGTCAGATCAGACAGATTCGTAGGAAGATGAGGGAGATAATGGTCAACCAAGCAACATCATGCGATTTGAAAGAGTTGGTTCGTAAGTTCATACCTGAATCAATTGGAAAGGATATCGAGAAGGCTACATCTAGCATATACCCTCTACAGAATGTTTTCATCCGGAAGGTCAAGATCTTGAAAGCTCCCAAGTTTGATCTTGGAAAGTTGATGGAGGTTCATGGTGATTATTCGGAAGATGTTGGCGTCAAGGTAGACAGGCCTGCGGAAGAAGCCGTTGAAGGTGCTACTGAAGTTGTCGGTGCTTGA

Protein sequence

MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEAVEGATEVVGA*
Homology
[Close]
BLAST of Cucsa.168250 vs. Swiss-Prot
Match: RS3A_CICAR (40S ribosomal protein S3a OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 5.2e-131
Identity = 234/261 (89.66%), Postives = 248/261 (95.02%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ DE++A+RKIRLRAEDVQG+NVLTNF+GM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEISLADLQGDEDNAFRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGK+IEKATSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKSPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPAEE-AVEGATEVVGA 261
            KV+ PA+E  VEG  E+VGA
Sbjct: 241 TKVESPADETVVEGTPEIVGA 261

[Close]
BLAST of Cucsa.168250 vs. Swiss-Prot
Match: RS3A_HELAN (40S ribosomal protein S3a OS=Helianthus annuus GN=RPS3A PE=2 SV=2)

HSP 1 Score: 466.8 bits (1200), Expect = 1.5e-130
Identity = 228/260 (87.69%), Postives = 247/260 (95.00%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ DE+H+YRKIRLRAEDVQG+NVLTNFWGM+ TTDKLRSLV+KW +L
Sbjct: 61  LKHRVFEVSLADLQNDEDHSYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDN+TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIMV QA +CD
Sbjct: 121 IEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV+KFIPESIG++IEKATSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVG
Sbjct: 181 LKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPAEEAVEGATEVVGA 261
           VK+DRPAEEA   ATEV+GA
Sbjct: 241 VKLDRPAEEAAPEATEVIGA 260

[Close]
BLAST of Cucsa.168250 vs. Swiss-Prot
Match: RS3A1_VITVI (40S ribosomal protein S3a-1 OS=Vitis vinifera GN=GSVIVT00020038001 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 5.7e-130
Identity = 230/261 (88.12%), Postives = 246/261 (94.25%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQ DE+ AYRKIRLRAEDVQGRNVLTNFWGM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEISLADLQADEDQAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N ATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV+KFIPESIG++IEKATSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPAEEAV-EGATEVVGA 261
            K++RPA+E V EG TEV+GA
Sbjct: 241 TKLERPADEPVAEGVTEVIGA 261

[Close]
BLAST of Cucsa.168250 vs. Swiss-Prot
Match: RS3A_CATRO (40S ribosomal protein S3a OS=Catharanthus roseus GN=RPS3A PE=2 SV=4)

HSP 1 Score: 464.2 bits (1193), Expect = 9.7e-130
Identity = 228/261 (87.36%), Postives = 249/261 (95.40%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF+V+NVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           L+HRVFE+SLADLQ DE+H++RKIRLRAED+QG+NVLTNFWGM+FTTDKLRSLVRKW +L
Sbjct: 61  LEHRVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIMVNQA SCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DV 240
           LK+LV+KFIPESIG++IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+
Sbjct: 181 LKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDDI 240

Query: 241 GVKVDRPAEEAVEGATEVVGA 261
           G K+DRPAEEAV   TEV+GA
Sbjct: 241 GTKLDRPAEEAVAEPTEVIGA 261

[Close]
BLAST of Cucsa.168250 vs. Swiss-Prot
Match: RS3A_TOBAC (40S ribosomal protein S3a OS=Nicotiana tabacum GN=cyc07 PE=2 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 4.5e-127
Identity = 225/261 (86.21%), Postives = 245/261 (93.87%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DP+AKKDWYDIKAPSVF +KNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPYAKKDWYDIKAPSVFDIKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ+DE+ ++RKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQKDEDQSFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD+YTLRMFCI FTK+RPNQ KRTCYAQSSQIRQIRRKM EIM NQA+SCD
Sbjct: 121 IEAHVDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELV KFIPESIG++IEKATSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVG
Sbjct: 181 LKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDIGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPAEEAV-EGATEVVGA 261
           VK+DRPA+E V E   E+ GA
Sbjct: 241 VKLDRPADETVAEAEPEIPGA 261

[Close]
BLAST of Cucsa.168250 vs. TrEMBL
Match: A0A0A0LLN9_CUCSA (40S ribosomal protein S3a OS=Cucumis sativus GN=Csa_2G223140 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 2.2e-144
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPAEEAVEGATEVVGA 261
           VKVDRPAEEAVEGATEVVGA
Sbjct: 241 VKVDRPAEEAVEGATEVVGA 260

[Close]
BLAST of Cucsa.168250 vs. TrEMBL
Match: A0A0A0L4P6_CUCSA (40S ribosomal protein S3a OS=Cucumis sativus GN=Csa_3G146360 PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 4.2e-140
Identity = 253/261 (96.93%), Postives = 258/261 (98.85%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGK+IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPAEE-AVEGATEVVGA 261
           VKV+RPA+E AVEGATEVVGA
Sbjct: 241 VKVERPADETAVEGATEVVGA 261

[Close]
BLAST of Cucsa.168250 vs. TrEMBL
Match: A0A059B376_EUCGR (40S ribosomal protein S3a OS=Eucalyptus grandis GN=EUGRSUZ_H03423 PE=3 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 1.8e-135
Identity = 244/261 (93.49%), Postives = 252/261 (96.55%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVFTVKNVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFTVKNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE SLADLQ DE+H+YRKIRLR EDVQGRNVLTNFWGMNFTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFETSLADLQGDEDHSYRKIRLRCEDVQGRNVLTNFWGMNFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGK+IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED+G
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDIG 240

Query: 241 VKVDRPAEEAV-EGATEVVGA 261
           VK+DRPA+E V E  TEV+GA
Sbjct: 241 VKLDRPADETVAEAPTEVIGA 261

[Close]
BLAST of Cucsa.168250 vs. TrEMBL
Match: A0A0L9TAL1_PHAAN (40S ribosomal protein S3a OS=Phaseolus angularis GN=LR48_Vigan442s001900 PE=3 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 1.5e-132
Identity = 240/261 (91.95%), Postives = 250/261 (95.79%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ DE+HA++KIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEVSLADLQGDEDHAFKKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQAT+CD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATACD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGK+IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPAEE-AVEGATEVVGA 261
            KVDRPA+E  VEG TEVVGA
Sbjct: 241 TKVDRPADETVVEGTTEVVGA 261

[Close]
BLAST of Cucsa.168250 vs. TrEMBL
Match: A0A0S3T6R9_PHAAN (40S ribosomal protein S3a OS=Vigna angularis var. angularis GN=Vigan.10G239300 PE=3 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 1.5e-132
Identity = 240/261 (91.95%), Postives = 250/261 (95.79%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ DE+HA++KIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFEVSLADLQGDEDHAFKKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQAT+CD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATACD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPE IGK+IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPAEE-AVEGATEVVGA 261
            KVDRPA+E  VEG TEVVGA
Sbjct: 241 TKVDRPADETVVEGTTEVVGA 261

[Close]
BLAST of Cucsa.168250 vs. TAIR10
Match: AT3G04840.1 (AT3G04840.1 Ribosomal protein S3Ae)

HSP 1 Score: 449.5 bits (1155), Expect = 1.4e-126
Identity = 223/262 (85.11%), Postives = 246/262 (93.89%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKG+KGGKKK VDPF+KKDWYD+KAPS+FT +NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPSIFTHRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVL  FWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQGDEDNAYRKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD+YTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IMV +A+SCD
Sbjct: 121 IEAHVDVKTTDSYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMRDIMVREASSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDV 240
           LK+LV KFIPE+IG++IEKAT  IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDV
Sbjct: 181 LKDLVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDV 240

Query: 241 GVKVDRPAEE-AVEGATEVVGA 261
           GVKVDRPA+E AVE  TE++GA
Sbjct: 241 GVKVDRPADEMAVEEPTEIIGA 262

[Close]
BLAST of Cucsa.168250 vs. TAIR10
Match: AT4G34670.1 (AT4G34670.1 Ribosomal protein S3Ae)

HSP 1 Score: 448.4 bits (1152), Expect = 3.1e-126
Identity = 224/262 (85.50%), Postives = 242/262 (92.37%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKG+KGGKKK VDPF+KKDWYD+KAP  FT +NVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVLT FWGM+FTTDKLRSLV+KW TL
Sbjct: 61  LKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIMV +A+SCD
Sbjct: 121 IEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDV 240
           LKELV KFIPE+IG++IEKAT  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDV
Sbjct: 181 LKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDV 240

Query: 241 GVKVDRPAEEA-VEGATEVVGA 261
           GVKVDRPA+E  VE  TE++GA
Sbjct: 241 GVKVDRPADETMVEEPTEIIGA 262

[Close]
BLAST of Cucsa.168250 vs. NCBI nr
Match: gi|449472057|ref|XP_004153483.1| (PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus])

HSP 1 Score: 519.6 bits (1337), Expect = 3.1e-144
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPAEEAVEGATEVVGA 261
           VKVDRPAEEAVEGATEVVGA
Sbjct: 241 VKVDRPAEEAVEGATEVVGA 260

[Close]
BLAST of Cucsa.168250 vs. NCBI nr
Match: gi|659096858|ref|XP_008449325.1| (PREDICTED: 40S ribosomal protein S3a-like [Cucumis melo])

HSP 1 Score: 519.2 bits (1336), Expect = 4.1e-144
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPAEEAVEGATEVVGA 261
           VKVDRPAEEAVEGATE+VGA
Sbjct: 241 VKVDRPAEEAVEGATEIVGA 260

[Close]
BLAST of Cucsa.168250 vs. NCBI nr
Match: gi|449432676|ref|XP_004134125.1| (PREDICTED: 40S ribosomal protein S3a [Cucumis sativus])

HSP 1 Score: 505.4 bits (1300), Expect = 6.1e-140
Identity = 253/261 (96.93%), Postives = 258/261 (98.85%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGK+IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPAEE-AVEGATEVVGA 261
           VKV+RPA+E AVEGATEVVGA
Sbjct: 241 VKVERPADETAVEGATEVVGA 261

[Close]
BLAST of Cucsa.168250 vs. NCBI nr
Match: gi|659076341|ref|XP_008438626.1| (PREDICTED: 40S ribosomal protein S3a [Cucumis melo])

HSP 1 Score: 505.4 bits (1300), Expect = 6.1e-140
Identity = 253/261 (96.93%), Postives = 258/261 (98.85%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE+SLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL
Sbjct: 61  LKHRVFEISLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGK+IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240

Query: 241 VKVDRPAEE-AVEGATEVVGA 261
           VKV+RPA+E AVEGATEVVGA
Sbjct: 241 VKVERPADEAAVEGATEVVGA 261

[Close]
BLAST of Cucsa.168250 vs. NCBI nr
Match: gi|702444159|ref|XP_010024230.1| (PREDICTED: 40S ribosomal protein S3a-like [Eucalyptus grandis])

HSP 1 Score: 490.0 bits (1260), Expect = 2.6e-135
Identity = 244/261 (93.49%), Postives = 252/261 (96.55%), Query Frame = 1 

Query: 1   MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEG 60
           MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVFTVKNVGKTLV+RTQGTKIASEG
Sbjct: 1   MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFTVKNVGKTLVSRTQGTKIASEG 60

Query: 61  LKHRVFEVSLADLQEDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWHTL 120
           LKHRVFE SLADLQ DE+H+YRKIRLR EDVQGRNVLTNFWGMNFTTDKLRSLVRKW TL
Sbjct: 61  LKHRVFETSLADLQGDEDHSYRKIRLRCEDVQGRNVLTNFWGMNFTTDKLRSLVRKWQTL 120

Query: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180
           IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD
Sbjct: 121 IEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCD 180

Query: 181 LKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 240
           LKELVRKFIPESIGK+IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED+G
Sbjct: 181 LKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDIG 240

Query: 241 VKVDRPAEEAV-EGATEVVGA 261
           VK+DRPA+E V E  TEV+GA
Sbjct: 241 VKLDRPADETVAEAPTEVIGA 261

The following BLAST results are available for this feature:
BLAST of Cucsa.168250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS3A_CICAR5.2e-13189.6640S ribosomal protein S3a OS=Cicer arietinum PE=2 SV=1[more]
RS3A_HELAN1.5e-13087.6940S ribosomal protein S3a OS=Helianthus annuus GN=RPS3A PE=2 SV=2[more]
RS3A1_VITVI5.7e-13088.1240S ribosomal protein S3a-1 OS=Vitis vinifera GN=GSVIVT00020038001 PE=3 SV=1[more]
RS3A_CATRO9.7e-13087.3640S ribosomal protein S3a OS=Catharanthus roseus GN=RPS3A PE=2 SV=4[more]
RS3A_TOBAC4.5e-12786.2140S ribosomal protein S3a OS=Nicotiana tabacum GN=cyc07 PE=2 SV=1[more]
BLAST of Cucsa.168250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLN9_CUCSA2.2e-144100.0040S ribosomal protein S3a OS=Cucumis sativus GN=Csa_2G223140 PE=3 SV=1[more]
A0A0A0L4P6_CUCSA4.2e-14096.9340S ribosomal protein S3a OS=Cucumis sativus GN=Csa_3G146360 PE=3 SV=1[more]
A0A059B376_EUCGR1.8e-13593.4940S ribosomal protein S3a OS=Eucalyptus grandis GN=EUGRSUZ_H03423 PE=3 SV=1[more]
A0A0L9TAL1_PHAAN1.5e-13291.9540S ribosomal protein S3a OS=Phaseolus angularis GN=LR48_Vigan442s001900 PE=3 SV... [more]
A0A0S3T6R9_PHAAN1.5e-13291.9540S ribosomal protein S3a OS=Vigna angularis var. angularis GN=Vigan.10G239300 P... [more]
BLAST of Cucsa.168250 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04840.11.4e-12685.11 Ribosomal protein S3Ae[more]
AT4G34670.13.1e-12685.50 Ribosomal protein S3Ae[more]
BLAST of Cucsa.168250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449472057|ref|XP_004153483.1|3.1e-144100.00PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus][more]
gi|659096858|ref|XP_008449325.1|4.1e-14499.62PREDICTED: 40S ribosomal protein S3a-like [Cucumis melo][more]
gi|449432676|ref|XP_004134125.1|6.1e-14096.93PREDICTED: 40S ribosomal protein S3a [Cucumis sativus][more]
gi|659076341|ref|XP_008438626.1|6.1e-14096.93PREDICTED: 40S ribosomal protein S3a [Cucumis melo][more]
gi|702444159|ref|XP_010024230.1|2.6e-13593.49PREDICTED: 40S ribosomal protein S3a-like [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001593Ribosomal_S3Ae
IPR018281Ribosomal_S3Ae_CS
IPR027500Ribosomal_S1/3_euk
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.168250.1Cucsa.168250.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001593Ribosomal protein S3AePFAMPF01015Ribosomal_S3Aecoord: 15..221
score: 3.3E
IPR001593Ribosomal protein S3AeSMARTSM01397Ribosomal_S3Ae_2coord: 15..221
score: 3.8E
IPR018281Ribosomal protein S3Ae, conserved sitePROSITEPS01191RIBOSOMAL_S3AEcoord: 61..73
scor
IPR02750040S ribosomal protein S1/3, eukaryotesHAMAPMF_03122Ribosomal_S3Ae_eukcoord: 1..257
score: 40
NoneNo IPR availablePANTHERPTHR1183040S RIBOSOMAL PROTEIN S3Acoord: 1..249
score: 5.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.168250Csa2G223140Cucumber (Chinese Long) v2cgycuB256
Cucsa.168250MELO3C014292Melon (DHL92) v3.5.1cgymeB300
Cucsa.168250CSPI02G11070Wild cucumber (PI 183967)cgycpiB264
Cucsa.168250MELO3C014292.2Melon (DHL92) v3.6.1cgymedB293
Cucsa.168250CsaV3_2G013510Cucumber (Chinese Long) v3cgycucB269
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None