Cucsa.167370 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.167370
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	toprim domain-containing protein
Location	scaffold01154 : 721502 .. 739156 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCCACTCTTAGCACACCCCTAACTCATTCCTTTCTTCACCAACATTCATTTTAATGCCCTGTTGGTTTCTTCAGTCTCTACCTAACTACCATGTTATCTCTGTAGCCTACACTTGAAATGGTGGCCATACTCAGCTGATTACCCTAACCCTACCAAGAGCCAGAATGCGTTTTCTTCATAACAATCACTGTCTCTATACCCCCTTTTCCAAACTCTCTTCCTTTTCCTCACCATCTTGTCTAATGGGTTCCTTTCCTTTATGCAAATCAACTTCTCTGGTTTTCCTGTCACACCTTTCTTCTTCTTCTTCTTCTTCTTCGCAGAAGTATTTCCTGTACAGAAGCATTTCTCTTCTCCATGGTTCATTTCCTGTACGACCCATGTCCCTTGTGAAACCCTTTGCCATGAAACCAAATGGGGTTTCTTCTTTTACTTCTCATGCCAATGTTCCCAGACCTCCAGGTGCTATTATTGGAACTTTTTATGGTTGTTTAATTGTAGTTGGGTTTATGATTGTTTCTGGTTAATACCCATGTTGTGGAGTAACTTGATGTTTCTTGGCTGGGTGGTTACTTTTTTTTTTCCCACTTTTTGGATTGGGATGAAACAGGAGAGGTTAAGGGTACATTTTTTAAGGCAGCAAAGTAGTTTGCAGGCAATGTATTCTGAGGATGGGATTTGGGAGAGGACTTGACGTTTGTTTAGTTTTAATGTTATTCGCTTTCTTCTTTGTGCAGCCCTTTTGGAGAATCCACCAGACAAGGCTTCAAGCTCCACTCGATTGAATATTCTGAGAAAAAAATTGCAGGATCTTGACATTGACATCGAAGCTTGTGTTCCCGGGCAGTTTTACAGTTTGCTTTGTCCAATGGTATTTTGTTTCTAATATCAGTTTCTTTATGCACATTGTATTCTGGTTTGAGATATTCAACCAATTTGTAGAAGTGAAATGAAAACAGCTGCCAACTTCTATATCTTATTTATTTATGTATTTATTTTTGGTAAGAAACCAGAAGATATATGGATGAAAAAAAGAAGACAGCCTAAGGGCAGGAAAGAGAGACCCCCTTCCAAAGGTGTTAATAAAATTAATAAAAGCAGCAAGCATATCTTCAGGAGTCCATTGACTTGTTGCGGTCAAAATTCATCAATTCTAACCAGTTTTCAATTGAAATTCATGAATTGGGGACTAATCTTGGTCTAAGTTCAAGAATTTGGACCACATCTCAGTTGGAATTAGTGAGTTTCAAAGAGTTTTCGGCAGAACTCATGAATTCAGATTTCGACTTCTTCTTTGAAAAGATGGATAAAAAAATCTATTTTACAATTCCTTATTCAATTTGGATAGGGAAAGTGGGTTAAAAAGTTGATGAATATGGAATGAAAGCAAAAAATGGAAAGAAAGGAAAAGATTTGCATTGGAATCTAGAAAGCAAAAGATGTGCATCAAAAAGAGTCTTTATCAACTTAAATTTGCTCCAAGGGACTCTGCTTCATTAGTTTTTGTTTGGGGCAATCGGATCTAGTTCTGATGTAGTTAGCTTGGCTGTTGGTTATTAGCTGATGTAATTAGCTTGGTTATTAACTGCTGGAAAGTACTCACACTTTTAGACTTTTGACTTGTTGTAAAGGTGGTAGGTCACCTTCTGCCTTAGTATAAAACTTGGAATTAGGCTGTTCTAATTTTTTTTTCAATTCATATTTTAATAAGAAGAATAAAGACTTCAGTTTTTTTGTTTGAACTTCTCCAAGACTTCATCAACTTGCTATCAGAGCTCTCGAAGAAGGGACTCATGGTGGGAAGGAACCCAGCCAACGCTGGCAAAGGCAAGCGTGTCAATGAGCAACCCTTGGAACCAGAGATTCTCTCGCTGAAGACTTCAACCCCACTCTTGTTGGCCGTTGAAGAAGCGATAGGAAAGATGAATACCCGTTTGGCCAATCTACAACTTGTAATCGAATGGGTGTCCTGCCAAATGGAATTAGGCACAAACGCCTTACCAAACTGGCAAGATGCCGCCACTAGAAATAAGAGAAGAAGATGCTAGCTGCAACTCGCCGACAACATGCAAGAACCAAGAACCAAGAACCGACGAGGATACCTCAGAAAGCGCCAAGAAGCTTCAAATGCACCTAGTGACCACTGACTTCTAAGACTTGTTGTTATACAAACAAATTCGAATGCATTGTCGAATGAAGAAAATGGGTTCGATCGTCAACTTGCAGACCAACGGTGGATGCAATGAAACAAAGAGGGTAAAAAATTATTTTGAGTGTAACGAGTTTCACCTTCTCTTCAAGGCTATCTTGTACTCAAAAATCCCTTTTTCATCACAGAGAGGGCCAGATAAGAGGGGATTATTACCAAGAATTTAAAATGAAGGTGGACTTAACCACATTCAGTGGAAAATTAGATGTGGAGGAATTTCTTGATTGGATCAAGAATGTGGAAAACTTTTTTGAGTACATGATAGCCTTGAAGAGAAGGTGAAACTCGTTTCACTCAAAATCAAGTCAGGAGCTTCAGCTTGGTGGGACCAAATCTAGGTGAATCGGAGATAGATCGGAAAAAGTCTCACTAGGAATTGGCCTAGAATGTTGAAACTAATGAAGGGAAGATTCTTGCCAACAGATTACGAACGGATTTTGTACCATCAATATAAAAAATGCAAACAAGGCAAGCATAAGATATTTGAATATGCGGAAGAGTTTCACTGATTGAACGCAAGAACGAGAATCAACGAAATAGAAAACCGAGATTTGTTAATGGCCTTAAAGAAGAGATCCAAGAACAAAGGAATCTCCAATTGATTAGCACCCAATCGGCGGCAATTTTGATGATTTACAAAGTCGAGATCAAGATGGAAAGAAGACAGAAAATACGAGATCCGTCAAGAACAAGTGAATGAACTCCTAGAGAAAGGGCATATTAGGCCAAGCCTAAGTCCTTGCATCTTTCAAGACCAATGAGGGCCTCTTTGAATGGTTGGTATGCCTTTCAAACTTTCCAATGCGCCTAGCATTTCCATGAGGTTAATGACTTAGGATTTACATTCTTGCCTTAATAAATTCTTGGTAGTCTATTTTGATGACATTTTAGTATGTATCCTTTCCTATGAAGAACATCTTTCTCACTTGCATAAACTTTTAAAACCCTTCAAAGAAACCAACTTAGTATCAATTTCAAGAAGTGTTGACGTGCTTTAATTTCTATTTCTACTGTTGAGCTTTTACTCTTCAGCTTTCAAGACCTTAGTATTGTTCTTGTATTTTGGATATGATGAGAATGCTAAGGGGGTGCCAGCCTAGCTGAGATGTCTGGGTGCACCTACTGATCCTCTCTCTCCCTCTCCCATTTCTAGGCTTTTCTATTACTCTCAATGTATACTCCTTTGTACTTTGAGTTTATTAATAATATTGAAGCTTGTCTCCTTTCTAAAAAAATATATCAATTTCAAGAAGTGTTCTTTCTTGGTCAAAGACATATTTTTTTGGGTTTTGTCACTAATGAATTTGGTATATCTGTAGATCATAAAATTTTTTACTACTATAGCATCCTTGCTAACTGAATGTTTAAAGAAAGGAAAATCCTCATGGTCTAACATGGTCTAACTCGCAAACACAAAGTTTTGTGCTTTTGAAAGAAAAGTTGTCTAACAAAACCGTTCGAGGTAGCGGTTGGTGCTTGTGGAGCACCTATGAACAAGAACTTTTTCGTTGGTAAGAGCTTTAAAGGCCTGGGAAAAATTATCTTGTAGGCCAATAATTCATTTAATATTCCAACCACTTGTCCCTCAAATATTTACAGACCCGAAAAACTATTAGTAGAATGCATGCTAGATGGCTCTCTTTTACCCAACGTTTTCATTTTGTAATAAAGCATAAGGCGGGTAGTACGTACTATGTTGTGGCGGGTGCTCGTAGTAGGAAAGCCAATCTTCTGACTATCCTAAAGACTCAAGTGGTAGTTTTTGATTCTTTACCAAACCTTTATAAGGATGACCTTAACTTTGGCAATATTTGGTTTTTATGTATTGATGAGGTTAATTGTCACTTGACTAACGAGTTTCTTTTGAAGAATAATTTTCTTTGCATTTTTGGAACATCGCTTCATGAGGCTTTGATTGAAGAGTTTCATAGCAATGGCCTTGTGGGGCGTTTCGATATTGACAAGACCTATCAACTACTTAGTGAAAGGTATTATTGGCCACATCTACGTAGGGATGTCATAAAGTTTGTCAAATACTGTTTTATGTGTCAAACTGCCAAGGGACAGCATCGAAATACGGGCCTTTACACCCCATTACCTATTACGGGAGGCATTTGGGAAGACTTGTCCATGGACTTCATCCTAGGCCTTTCAAAAATTCAAAGGGGGTATGATTCCCTTGTTGTGGTAGTTGATCGATTTAGCAAGATGTCTCACTTTTTACCTTGTAGGAAAACTTCGAATGCTGTTTATGTATCTAACATATTCTTTAAAGAAATTGTGCGTTTGCACGGAATACCTAAATCCATAGTGTTTGGTCGAGATGTAAAGTTTCTAAGCTACTTTTGGAGGACTCTTTGGAAAAAATTCAACATGACACTCAAAGTTAGCACCACGAGTCATCCACAAATGGATGGACAAACTGAAGTCAATAGTAGAACTCTAGCCAACCTTATAAGATGCATCGGTGGAGACAAACCTAAACAATGGGATCTCATCTTAGCACAGGTAGAGTTTGCCTACAATCATATGAAGAATCGATCCATTGGGAAGTCACCATTTGAGATTGTTTACACTAAATTACCTAGATAAACAGTTGACCTTGCCAATATTCCTTCTAATGTTGATCTTAGTGTAGAAGCCGAGAACATAGCCGAAAGAATAGCAAAACTGCACAAAGATCTAGCAAACCAACTAGAAAAGATGAATGAAAACTACAAGAAACAAGCGAATAAACATAGAAAATTCAAGGAATTTAAAGAAGGCAATCTCGTCATGATATATCTTCGAAAATAGGACCTTATCGAATAGTAAAGAAGTTTGGAGACAACACATACAAGATTGACTTACAGGATCACGAACACATCAACCCTATCTTCAACTTAGCCAATATTTTTTAGTATTTTCTACCTGACCAGCTGCATATTTCAGCCTAACTCTAGGACGAGTTTTCCTTTGGAGGAGGGAATTTGATGTAATTAGCTTGGTTATTAACTTCTGGAAATTACTCACACTTTTAGATTTTTGACCTGTTGTAATGGTTAGTTCACCTTCTGCCTTAGTATAAAACTTGGAATTAGGCTGTTATTATTATTTTTGAATTCAGATTTTAATAAAAAGATTAAAGACTTCAGTTCTTTTGTTTGAACTTCTCCAATACTTCATCAAGTTCCTATGGTTATCTTTCTTTCAAACAATCATGGTTGGCCTAGTGGTAAAAAAAGGACACATAGTCTCAATAAACGCTAAGACGTCATAGGTTCAATACATGGTGGTCACCTACCTAGTCCTATGAGTTTTCTGGACACCCAAATATTGTAGGGTTAGGTGGGTTGTCCCGTGAGATTAGTCGAGGTGCATGTATCTTACCTGGACACTCATGGATATTAAAAAACGGATATTTCATGATGATACTTATGAAGCTTTGCCATTTTCTAATAGATTATGGATCAACATTGGACTTCACTTGATTTAGTTTTTTAGGCCCCTCTGCTTTGTTATTGTCAGATTTGGTTGTACCTTTTTCTATTTGCTCATTTGTATTTTGGTTGTTATTCACTCTTTCATGTATGGGCTTCCTCTTTATCTTTTTAGGGGTTTTTCCACTTACTCTTTGGATTAATCTCATTCATCTATAAAATGTTTCTTATTAATTTTTTTTTTGATGAATATTTATTTATCTTGTATTTAATAAGTGAGGGCATAAATGTTACTTTTTGCATAAGCAATGGGCCCAAATCGACTGGTTTTTAAGAGGTACTTTTTTGTACAATGTAAACATTTAGAGGCCATTTTTTAGAATTACTGTATGAACTTATAACTTCCAAGTGCAAAGAGGTAGTTATTATCATTATTATATTTATTTTGATTTTTTTTTTTAATTTTACGTCATGCCTCGATTAATTATGTATCAAATTGGTGCCAGTGCAAAGGTGGTGATTCAGAGGAACGATCCTTCTCCCTAAATATCTCAGAAGATGGGTAAGATTTTATAGCTTTTTTCTCGTCGAGTTTTTTTCACAATCTTTTTATTTGATATACTGATAGGCTTTTGTGTGTTTGTGTTTTTCTTATATGGTTTGTTTTAAATGTTTTTGTCGAAGTTATTTAGGGTGACATTTAATTATTAAAAGTCTGAATTATCCTTGTTCTTCTTTCGCTTATGTAGACTTCTTTATTTAGTTCTTTGTATAATTCTCATTATTATTAATAAAAAAGTTTGTTTCGGTTTAAATTTTTTTTATTAAAAGTCTTAATTTTGGCTTCTTCCTCAGTTGGGTTTTTCTAAGTCTTTTTACTTTTTACACTATTAGTATTTGTTATTTTTTTTGAAGAGGAAAGAAGTCTTAATATTATTAATGAATAAAATAGAGACAAATGCTCATATACTAGAGGGTTATACAAAGAGCAAAAAAAGAGTGAGAGACGGATCAACATGCGCACCTGGACATCTCAACTAGGTTGACACTCCTTGGCGCCCTCATCATATCCATAGGTGGAAAGAAATAAAAATTATCCTTTCTCCAGGTTGATAGTAGCATACAAAGCCAAAATACAAGACCAAAATAAAGTAGTCAGTCCATACAGAACATTAAAAAAGAAGCATCAGCGATATATTAGTAAAGCATTCCTCATTTATGCTAGGATCAAGTTGAAGCAGAAGGCCATTCAAAAGTCATGCTGCCCAAGACTTCAAAGTGGAGGGGCTATGAAGGCTGGCCAGTTCAGCAAAATCTCCTGCAGAGAGTACTCCTGAATAACTTTGGATAAGGAACACCACAATGTTGCAATTCAAATTGGTCCATCTATGTCGAAGGCTTGTCATGGAAAACCCTCTGATTTCTTTCAAACCAAACTTCAACTAATAGAGCTTTCACTGCATTAACCGACAGCAAGACAGCTGTCTTCTTCTTCAAAGCTGGACTAACAATGATTTGGACCACATTCTTCTTAAAGTCTTTATCGAAAACCCAACAAATATTAAAAGTTTGGTGGAGTCGGAACCAACATTTTGTTGCATAAACATAGTCAAACAAAAGGGGCTGGATGTTCTCCTACTCGTCTTTACAAAGGGGGCAAAGCATGGGATATCCTCCTAGTCAAATAAAAGTTGCTGAATGTTGCAATGCTGGATATCCTTCAATATGTGGTGACAGAGCATGGGAAGAGAGTTGTCTTTGAAGGACCAATGCTCAGATTAGGTTATCGAACAACATAATCCATAAGGAGATGTTTACTATTCTTGGACTGTTTGACTGTCAGTCTTTTTTGTAAAGAGATATCCATAGGTGAAGATGGAGAGAGGTGATCAACCAAAGATTTTACCAAGAAGGAGCCATTTGTTTTGAGAGACAAAACCTTCTATCCGGATGGGTGCCCGGCTGTGAGGTAGAAAGCTGGCTTAATACGGACTGGAAGTCTAAGATTTCTTCATCATCAAGCAGTCTTCTAAAAAAATGAACCAAGGCTGGTGGAAGAGTCCCAATGAAATGGACCATTTGGATTGTGTGCAACCCTAAACAGTCTTGGAAATTTACAATTCAGGGAAATTCTTTCCATTTAAGGGTGTTGCCAAAAAAGGATTCTGCTGCCATCACCTAAATTGAAGAGTGCCAATGCATCTATTTTGCGCCATTGTCTGGAAATGCTAATCCAAGGGCTTCTAAGGCTCAAAGTTTCTTTTCCATTTGTATGCCAATTAAAGGTACTGCTTCCATGGATGCTTCTAATCACTTGACACCACAATGAATTTTGTTCAAATATAAAGCGCCAGCACCACTTAGACAATAATGCCAAATTCTTGTGTTTCAGCTTACCCAAACCGAGGCCTCCATCCTTATGCGATTTAATGACAACATCCCATTTTGCTAAGTGATTCAACTGTCCTCGCTTGTTTTATTCTCAAAAGAACTTCCTCATAATTCTTTCAAAAGAGCTTAGAACGCTTTCTGGCATGAGGAAAGAAAACATATAATAGGTAGGGAGACTGGAGATAACAGATTTGCATAATGTAATCCTCTTACCTCTAGAAAGGTTGTACCTTCTCCATTTGTCCAGCTTTCCATGGACGATTTTATCAAATATAGGCTGCCAGAACAGCTCTTTGGGTATCCACCCAAAGGAAGACCAAGATAAGTTAAGGGAAGGCTTTCCACTTTGCAGTTCAGATTATTTGATGTTGAAAGAATCTTGCTGTCCTCAATATTGATACCGCATATGGATGATTTCTCCCAATTAAGTTTTTGTCCAGAACACTATTCAAGAACTAATAACGTTTTCCTTCAATTTTCCAGCATCGCCTCATCAAATTTACAAAACAATAAAGTATCATTTGCAAATTGAAGTGTTTCAATCGCTGAATGCATGATTAATTGCTATTCGATTGAGACCAATCTAATGCATCGCGTTCCTCCTTCGACCGTGACCAATCTAATGCGGTTCTATCTAATCTGATTACAACGATTAATTTCTCAGAATCGGTTAATTTGTACTTTTGGAAATTTTGTTTGGTTCAAAGAAAACACGAGTCGAAGTCCTTACCGCCAAACACTCGTAACTCAAGCTTGTTTCGATCACTCACCTTCTCTTCAATTTGTATTTTCTTCGTTCGTCCTTCGTTCTCAGTTCGTTTTGTCGGTGTCCTTCCCCCTTCGATTGTGCTCTTCATCACCAATATTTGTTGTTTCTCGGCTTGATCCTCTAACTTCTCAATAATCTTCTTGCTTGTCTTCGATCCCTCAATTATTTCAAGCATCGATGCTTCACCTTGCTCTATCTTATTCTCACTCATCTTTATTCGGCTGAATGACTTCTTTTTCTCTCGTCGTAGATTTCTCACAAATCATGTCGTCAATTTATTTCATTAGCAAATCTTCTGTTTCTCTCAATGTCGTTTCTTCCTTCGCCCTCATTTCAACGCACTTTAACAACCGCTGTTCGTTTTCCTCGATTTGGATCTCCAACCGGTCAATCCTCTTTGCCACGGACCTTAAAGTTCCTCTGATTTCTGATAATTTCTGGAATCCTACTCGTGTGTCAGCTTTCTTCTTCTCCATTTCCCTCTGTTTTCCCAGGTTTGAGCTCTAATACCAATTTGATAGAACACTGATATGGTGTCTATACTTTATTGATATCTCCAACAGAAAATACAATATGAACGAAATTTGATATCCTCAGACAATGAATCACGATAACAGGACTTCACAATCAACAAGTAAATTAACTTCAACTACTCCAAACACTACGAACAAAACAATTCAGAATAATAGAATCAAAACACAAACGATAGAACCTGGCCTTCTGCTTCTCCTCTCTCTCAAGGAGTAATGCAGCCTTTTACCTTCACCAAAATCTTCATGCTCTTCTCCTCTTCCTTCCCTGGCTTTTATCTCTTTCTTCTAACTAACTTTGGCCCACCGTGGTCCCCTATTTCCCTCCCTCACTGCCTTAGTTTCCCTTCACACGCGCTTCCTCTTTCTCTTACCCATTCTACTGTATTGTAGAATAATAGGATGTCTATCATATTGTATCATAGAACAACATAAAAAAAGGTGAAGAAAAAGAAAATGAAAAAGAAAAGACAAACTATACCATATAATATACAATCAATATCAAATCAACTAATAATTTCAAGTCATTTAAAATTGGTAACTCAACAACCTCACGCCACTTTTCTTTTAGTTAACTAATGGTCAATTTAAAACAGGGGCCATTTATGACTATTTTCCAAAATTCAAGGACTAAGTGTTTACTTGGGAATTAAATAGACATTAACACCAATCCTCAAGGACCAAGTGTATGTTTCCCTATGTTTTGTAACGATCTTTTAGGTTATCAATTTAATTTTATTATAAATATGATTATTTTCAAATTCTTTATTTATTTTTTCTTGATATACATATATGGCTGTGACAAGTTAATATGACTTGAACTCATAGTTCGTTCACTACTAACCTTAGTTTGATTCTTAGCTTTATTTTTTTTTTGTTCAATGAAATTCAAACTTTTTTTTTCTAATGAAAAGTGGCTGGATTTCCTTCCAATCCACTGGACTTTTCAATTTTTCAATTGCATTGACCTGCATGTATTCTACGGCCTTTTTCTTTTTGAGTATCGTAGGTTTCTAATTTCCATTTCAAATGACCAGGGGGGCTGCTGTTTGGAATTGTTTTCGTGGAAAATGTGGTTGGAAAGGCCATACTCTGGTATTTATAATAATTCAATTAGTTATGCTTTCACACAAAATGTGGTTTGGGCCCTTTGACGTAGGGTTGATTTGAATAGTTCTTCAGTTATGTTTTGCTTTGTTTTTTTCTTTTTAATTTTTATGAGATAATTTGGTTTTTGTTTCAATTTCTTGTATTTTGTTCAAATATCATAGAATGTTTCATAAAGTTTAATTGAGAGGTACCCCACTACTTGTGGGAAGGGGTTGATGGGGAAGGGTCTCATTTGGTTAATTGGAAATTAGTGGTTAAGCTAGTGGAACTAGTAGGATTAAGGATTCGGGGCCTAAGATTTTAAATAGAGGCTTTGCTAGCAAAGTGGTTCTGACGATTCTTCATGGAGTTCTTTGTGGTATAAAGTTATCGTGAGTAGATATGCCTCACACCCATTGTTTTTTAAAGGTCAAGGCACAATAGTCTTCTAGGGCATACGCGCAAGGCGCAAAAGAAAAAGCTCAAGCCTTTTTGTTTAGGTGTGCTATGTATAAATGATGTAATTCAAAGTTAGAATTAATTTCCCAAATGAATTCTCTGCCAATAATGGCTAAGAGATGTGGTATTTATTAAGGTTTTGTAAGTTGGTTACAAAGTAGTTACAAGGAAACTGTTTATGACACAGTTAAGTATTTAACTGTTTTAACTAACTACAACTGTTTTCTACTCTAACTATAGCTTTCTTTTAGCCTTATTCTTATTACATCAATAAAAGTACTACATGAAGAAGAGAAAGCAACTAGTTCAAGTGGAAATATGAAAACCTAAACGCAAACAAAGTAAATATGATTTTTTTATAGTTAATAAATAAACAAAACCCTTTGTTATTACTAGTTTTTTTTTAAATAATGGAAACCCTCCCAACGCAAGGCTTTGAGCCTTTGGGCTTCACAAAAGATGCATGAATGAAACGCGTCTTGTTTTGTGAGTCTCGCCTTTTCCAGCAAGGCACCAAACTTGGGGGCTTTGAGGCTAGGTGCGCACCCGAGTGGGCTTTTCAAAAAACCGTCCAGAAAGCAGTTGTTCTGTCTAAAGACATAAGAAAAATGAAAAATCTCTTTGAAGCTATCACATATGGATTCCCTTTATTCTCTCAGTTTCTCAAATGGTTTGTTGGGCAAGACTTGAAAAGTTTATTTTGGGAGATCGTTGGGCAGGTGGTTATAAAACTTATATTATTAAAATAATAGAAAACCCGTTGGCGTGTCTATTATTTTATTTATACTTTTTTACTTTCCGACATGTTAGGACACTCCTAAGACACATGTAACTATCAGTGTCTATCAATATCTATCGTTGGTAGGTTTTAAACTTTTTTGCTATATTTGTAAATATTTTCAGCAGTTTTGTCATTTATAGTAATTTCCTTAACAACAACAATAATGTGTCCTCAATGTACCGTGCCCTACTTTGCTAGGTTCTAGACCAACATGTTCTTTGGGAGAGAAGGGACTCTAGAATTTGGTTTCTCAATCCTTTGCTAGGCTTCTCCTCTTGGTTCCTATTACATATTTTGTTTGTTGCTTTTACGACCTAGATTACTATTGCTTTTGTCGGTATTTGGAAGAGTACATTTCCAAAGAAGTTCAGTTTTTTTTCTGTGACAGGGTTTATATGGTGATTAACAACATAATTTTTATGTATTGAGAAAGGGACTGTATCATTGGCCAGTTGTCCGTGGTTTATGCTACAAAACTGAGATTGGTGGCAACATCTTGAGTCGAGCTACTAAGCTAAGGCAACCCACTAGGCCACTACCAAGTTTAAAATGGAGGGAGATTTGGGATCTCCATGCCTAAAACTTCTTGATCCAATGATCTTCTCTTCTTTTCTTATTATTATTTAGGCTAATTGAATGGTTGGGTTTTATTTATTTATTATTGTTTTCTTTCTTTTTCTTTTCTTTGGGTAGGCCAACTGGCTTTTAATGATGGTGTCCTATCACTCGTGTATTTTTTTCGACTGCTGTGAGCGTATCTTATAAAAATGGAAAAAAAGTTCACAATGCAAATTGGTGCCTTTTTTTCTTACTTCTTCCGTTACTTTACTTTACTGTTTTATTGATTTCATTTGTTTCAAATTGGTGCCTTTTTTTCTTACTTCTTCCGTTACTTTACTTTACTGTTTTATTGGTTTCATATTACTTTACTGTTTTATTGGTTTCATTTGTTTGGCTTAGCATAGTTTGTGATGGCAGGCCTTTGCTGATGGTCGGTCATCATATAAACATTTAGGACAAGTTGCACTTAAGCAGAACATACGGAAAATTACAGTGGAGAGTCTACAACTTGAACCACTGTGCGATCAGGTTGTTGATTTTATATTTTTCTTCATTTTGATGATAATTATTGCTTTCCGGTCTGTGTGAAAGCATATATGTATGTTATTGTGTAGTTTTCTAAATATGTTATTTGTAGGTGATCATCAATTCTTTTTCCTTTATTGTAATCCTACATTTTGTTCTATTAGGAATACTTATTTTTCTTGAAATTAAGAATTTAAAATTATCCCAAAAGTGCATTAAAACCTGTTAAAACACACTAAAAATGGGTATACTTTCATTTTTATTTTTAGGGAATTTTTTTAACAACTTTATAAATTATTTTTTTGCCTATAAGTTTGGAGAGGTAAGTTGTTTAACTAAGAATAAATTATTGAATCGTATAATTTATTTTCTTTAAACAAATGAAATTTATTTTAAGCATTTAGTATAATTTTGTCAACTAAGCATGGATATAAATATTTCCTTTTCATATGCAATTCAATTGCTCTTATAATTGTGGAACATAGAGAAAATAATTATGTTTCTTGTTTCAGCTGGTTGATTATTTCGCGGAGCGATTGATATCCAAGCAAACATTGTTAAGAAATTCAGTTATGCAGAAAAGATCCGATAATCAGGTAAAAGGAGTTATTGTTGAATTGAAGTAGCCATGGAGCATTGGCCTTTGAATGATAATCTCTCAGGGGTCGTTTGGTTTGAGAATTTTCTACATGAGAATTGACACAGATTTTTAAAACTCATGTTTATTTTTCACAATTTTAAAACTTTTGCCTGAGAGAACTGATTCCAGGCATCCTTATTTACCACAAGCCAGGTTTTTTTATTCCGTTCCAAAACAGTGAGTTTCTTCCTCTTTTTCCCCTCTATTTTATTTTATTTATAATTTCATTTGAAATACAGTTAATTAATTAATACTAACTTTAAAAAATTAATATAAAATATTTATTTCAATAAATTAGTAACAGTCTAATAAAATATCTACCTAACTTATTTTACAATAAAAAAGTTGTTAAATGAATACAGTTATTTCTTTACACAAATTATTAATTAATTAGCTAACCATATATTTAATTGATAAACTAAGATTAATTAAATTTAGTTAGCACAAAAATTTATTTTTCAATAATAATAATTGATTACTTTATTGTTTTTTCAATAATCAAGCCATTATTTCTTGAGATTAGTTTTAATTTATATTATTTCATTCATTAAAAACATATAATATTTATAAAAAAAAATTTAGTATTCTTCATCGATATATCATACTCCTATCTCATTTTTTCATTTTTTTATTTAATATATTGAACTAAAATATATTTTCTTATTGTATTTAATTAAAATTTAAATTACTTACGATAGACTTAATTAATTATAATGATTAAATATTAGATTATAATTAGTATTATGTTTGTTAAATATATCAATGGGTTTAATTTTAATTATCAATTTATTGAAAAAAAATTAGTTATAAATTACTTAATTTCAAGTATTTTTAGTTAAAATTATTATTGATTACAAATTAATCAAATTTTATCAATATATTGTTTAATTAATTAATCTATTAAATTTATATGTGACTTTTCTGCTTAATTTCATAAAATAAATTCAAACATATTTTTTGTTCATAAAATTCTGATAGCATTTCCCATGCTCAACCGAACACTGTCATCTTATTCCCAGGTATTCCATTCCCTATGAAACCTTAAACCAAACGACTCCTTAATGCCATTAAAGCATGCTAAATTGCATTTCAAATCTGTATTGATAAATTGTGCTTCATTAACTGTGGAAGAATGTTTCAATTTCATAAGTTGCAGTTGGATTTTTTGTAATATTTTGTTGTCTATATAGCTGCTTTGAATTATTATTATTTTTTAATAAAAAGAAACAAATCTATTCATTGAGTGAAAATAAGTATTCTTAATATTCTGCCATTGAATTAGATAAGAAATATCGGGAATGTATTGCATTTTGAATCTTTGAAAGGGAAAACTACAAAGGAAAAAGGGGAAACTAGGAAACAAGTTTACCTTTGACTTCTCTCTCTCTCTCTTGTGGATTAAGGGGCACGGTTTCTGTCAAGTTACAAGTTTGACCTTTTTAATGATTCGTTGTGATGGGCCTCATCATCTTAGTTGCTCTCTTCTTCTGCTTATTTTGTGCATTTGGGGGGTGGGGAGGGGCAGATCTCGAAGGGAAATTAAGTAGTTTTAGCTACAAAGCACATTTTGATAGCGTTCATGTCGAAACTTGAAAGCTCTGGTTATTTTGGTGATATTGAAGCCATAACTTTTGATTTGTATAAATTCTAATATGCTTACGGTAGTAAAATTTTACCATGATTTGCTTCTTCTGATTGCTTGCACTTGTTTCTACAGATTGCTGTGGCATTTACGTATTATCGAGGTGGAGCGCTAATTAGTTGCAAGTATCGTGATGCCAACAAAAAGTTCTGGCAGGTTCTTGGTTCAACTTATAAATAAAACTGTATGATAAATTTTTACTTATCCTAATCCTAAAGGCTTAAAATATATGCTTAGAGTAAATTCAGTTCATCTTAAATCATTTTGATTTTACCTTCTTCCCACTAGAAAAGTGTGCCATCTGCTTTACTTGTATAATGTTATTGTAAGAATTTATATATATAATCATCATTTGATTGTCTACCATTCCTTTATTTCAGGAGCCCAATACTGAGAGAATATTTTATGGAATCGATGACATAGATGGCGCAAGTGATATCATCATAGTATGAATTATTCAGTATGGAAAATCACTCCACTTAGATATATATTACTCATAATTTTCCTTTGTAATATAGGTTGAAGGGGAGATGGACAAGCTCTCAATGGCAGAAGCTGGTATCCATAATTGTGTGAGTGTTCCTGATGGTGCACCAGCATCAGTTTCCGAAAAGGACGTACCTCCTGCAGACAAGGTTACTCTTTCAGGACCTTGAATTTTTTTAAGCCTTAACCTTAGCTATCAGATTTGTTTATAACCAAGATTTGTTATTCTTTTCTTCATCACTCCACCTGATTCATTTCTCAAATTTTGTACTTATTGAGTAACAGAATTTGTCTTCTTTCTGCAGAATACATGTTTTTTCCTCTCAATTTCTATTTTTTTCATGTTCTCGCATCCACATCAAGTAACTGAAGTTGTCTTCACTCTACACTCTGCAGATTAAAATATGTCTAACTAGACGTTTTACAGAACTGGCATATATGGCTAGCTAGAAGATCTTCCTTGATGAAGTTATTTAATTAGCATTAGTGAAGGATTTCATTATATTTTTTTAAAAAAATCTGACTAGCAAATCACTTTCATCAGGAGAAATAATAATACAAAAGTAAACAGGCTGTATAAACATTTATGCACATATAATTTACAAGGGGCTATGTGATGATGTCCATTCTGCTGAAAGGCCTCATATTTGTTGAAATTTTCATGTTATGTTAGTTCCTTGTTACTGACGGTTAGTTTGAGATGTACTATGTCTTGTTATATTTTTTGTTTTTGGATAAGTATTCTTGTCTTATTGCCATTCTAGCTCTTTCTCCCATTTTACAGCCATGTGGTTAATGTTGTGTGTTTAATTTGCCTGCATACCATTCTGTTAAATGACCTCACTCCTTTTCTAAAATGATGTGGGAAGGTTTATCTTTGTGGGATAAAAAATGAGTGGTTACTGTGGGCAGGTATGCTTAAAAGAAAAATTCCTGTATCGTTCTCTTTTGGCCAGAAACAATGGTTTCAGTCCATTTGTAATATCTAATCATGTGCATTGTTATTCATTTGAAAATATTCATCCTGTGCCCAAGAAAACATTGTCATAAGATCATAAAAAAATGAATTATTATTGCTTATTATTTGGTTTGGTTGATGTAAATTTATTTTAGTCTGATTGAAATGCATATTTCATGTTTCTTGTGAAGCTAGGATAAGAAGTTTCAGTTTCTATGGAACTGCAAAGACTACTTGAATAAGGTTGGCAGATATAATCCCATTTCTTTTAAGCATGAAAGCAAAGTAGGCCATTGGAAACTGCTTAACTTATTGAAATTGATAGGCCTCACGCATTATACTTGCTACTGATGGGGATACTCCTGGTCAAGCTTTAGCAGAGGAAATTGCACGCCGTGTTGGGAGGGAAAGGTTTTCTTTTGTCATTTTTCTTGCTGCAATATATTATTTTGCTGGATTTGATGCGGAATAGTTTGGCTAGTAACAGACATTTTCATTTTCCATTTTTAGATGTTGGAGGGTCAAATGGCCAAAAAAGAATGAGGTCGATCATTTCAAAGATGCAAACGAGGTTGGAATTACTGATCAATTATCATTTTGCTGTACTTCTATTTATTTATTTTTAATAAACAAAATTAACCTTCTCAGGATGTCTATATTTTCTTTCTCATGACAAAGTTAATGTTTATTATATGTAATGCTTTGATGGGAAATGTTGTAGGTATTTCTGATAAATTTTTTCCTTTGCATAGACAAAGCTTGCTTTAGGCAATGAATCTAAGGGTGCATTTGACACACAAAGTTGAGTTGATAATAATTGTTTTTTGGTAATAATGGTCTCTTTGAGGTGCAAAGTTGAGTTGAGTTGGTAATAATTGTATTTATGCAAGTGGCTTCTGCTAAAAGCTAGAAAAACTAAACTTTGTTAATATTACCAATAAATGATTGTCAATGTTTGCATGGAATGGGATCACTTCTCTTCTAAATTGTGTTTAGGTTTTGATGTACTTGGGCCCTGAGGCCCTGAAGGAAGTTGTTGACAACGCAGAGTTGTATCCTATAAGTGGATTATTTCGCTTCAAAGATTACTTCCACGAGATTGATGCATATTATCACAAAAAATTTGGAAATGAGTTTGGTGTGCCGACTGGATGGAGGTGTCTCAATGATTTGTACAATGTGAGTTCAAACTAG

mRNA sequence

GACCCACTCTTAGCACACCCCTAACTCATTCCTTTCTTCACCAACATTCATTTTAATGCCCTGTTGGTTTCTTCAGTCTCTACCTAACTACCATGTTATCTCTGTAGCCTACACTTGAAATGGTGGCCATACTCAGCTGATTACCCTAACCCTACCAAGAGCCAGAATGCGTTTTCTTCATAACAATCACTGTCTCTATACCCCCTTTTCCAAACTCTCTTCCTTTTCCTCACCATCTTGTCTAATGGGTTCCTTTCCTTTATGCAAATCAACTTCTCTGGTTTTCCTGTCACACCTttcttcttcttcttcttcttcttcGCAGAAGTATTTCCTGTACAGAAGCATTTCTCTTCTCCATGGTTCATTTCCTGTACGACCCATGTCCCTTGTGAAACCCTTTGCCATGAAACCAAATGGGGTTTCTTCTTTTACTTCTCATGCCAATGTTCCCAGACCTCCAGCCCTTTTGGAGAATCCACCAGACAAGGCTTCAAGCTCCACTCGATTGAATATTCTGAGAAAAAAATTGCAGGATCTTGACATTGACATCGAAGCTTGTGTTCCCGGGCAGTTTTACAGTTTGCTTTGTCCAATGTGCAAAGGTGGTGATTCAGAGGAACGATCCTTCTCCCTAAATATCTCAGAAGATGGGGGGGCTGCTGTTTGGAATTGTTTTCGTGGAAAATGTGGTTGGAAAGGCCATACTCTGgcctttgctgatggtcggtcatcatataaacatttaggacaagttgcacttaagcagaacatacggaaaattacagtggagagtctacaacttgaaccactgtgcgatcagctggttgattatttcgcggagcgattgatatccaagcaaacattgttaagaaattcagttatgcagaaaagatccgataatcagattgctgtggcatttacgtattatcgaggtggagcgctaattagttgcaagtatcgtgatgccaacaaaaagttctggcaggagcccaatactgagagaatattttatggaatcgatgacatagatggcgcaagtgatatcatcatagttgaaggggagatggacaagctctcaatggcagaagctggtatccataattgtgtgagtgttcctgatggtgcaccagcatcagtttccgaaaaggacgtacctcctgcagacaagGATAAGAAGTTTCAGTTTCTATGGAACTGCAAAGACTACTTGAATAAGGCCTCACGCATTATACTTGCTACTGATGGGGATACTCCTGGTCAAGCTTTAGCAGAGGAAATTGCACGCCGTGTTGGGAGGGAAAGATGTTGGAGGGTCAAATGGCCAAAAAAGAATGAGGTCGATCATTTCAAAGATGCAAACGAGGTTTTGATGTACTTGGGCCCTGAGGCCCTGAAGGAAGTTGTTGACAACGCAGAGTTGTATCCTATAAGTGGATTATTTCGCTTCAAAGATTACTTCCACGAGATTGATGCATATTATCACAAAAAATTTGGAAATGAGTTTGGTGTGCCGACTGGATGGAGGTGTCTCAATGATTTGTACAATGTGAGTTCAAACTAG

Coding sequence (CDS)

ATGCGTTTTCTTCATAACAATCACTGTCTCTATACCCCCTTTTCCAAACTCTCTTCCTTTTCCTCACCATCTTGTCTAATGGGTTCCTTTCCTTTATGCAAATCAACTTCTCTGGTTTTCCTGTCACACCTTTCTTCTTCTTCTTCTTCTTCTTCGCAGAAGTATTTCCTGTACAGAAGCATTTCTCTTCTCCATGGTTCATTTCCTGTACGACCCATGTCCCTTGTGAAACCCTTTGCCATGAAACCAAATGGGGTTTCTTCTTTTACTTCTCATGCCAATGTTCCCAGACCTCCAGCCCTTTTGGAGAATCCACCAGACAAGGCTTCAAGCTCCACTCGATTGAATATTCTGAGAAAAAAATTGCAGGATCTTGACATTGACATCGAAGCTTGTGTTCCCGGGCAGTTTTACAGTTTGCTTTGTCCAATGTGCAAAGGTGGTGATTCAGAGGAACGATCCTTCTCCCTAAATATCTCAGAAGATGGGGGGGCTGCTGTTTGGAATTGTTTTCGTGGAAAATGTGGTTGGAAAGGCCATACTCTGGCCTTTGCTGATGGTCGGTCATCATATAAACATTTAGGACAAGTTGCACTTAAGCAGAACATACGGAAAATTACAGTGGAGAGTCTACAACTTGAACCACTGTGCGATCAGCTGGTTGATTATTTCGCGGAGCGATTGATATCCAAGCAAACATTGTTAAGAAATTCAGTTATGCAGAAAAGATCCGATAATCAGATTGCTGTGGCATTTACGTATTATCGAGGTGGAGCGCTAATTAGTTGCAAGTATCGTGATGCCAACAAAAAGTTCTGGCAGGAGCCCAATACTGAGAGAATATTTTATGGAATCGATGACATAGATGGCGCAAGTGATATCATCATAGTTGAAGGGGAGATGGACAAGCTCTCAATGGCAGAAGCTGGTATCCATAATTGTGTGAGTGTTCCTGATGGTGCACCAGCATCAGTTTCCGAAAAGGACGTACCTCCTGCAGACAAGGATAAGAAGTTTCAGTTTCTATGGAACTGCAAAGACTACTTGAATAAGGCCTCACGCATTATACTTGCTACTGATGGGGATACTCCTGGTCAAGCTTTAGCAGAGGAAATTGCACGCCGTGTTGGGAGGGAAAGATGTTGGAGGGTCAAATGGCCAAAAAAGAATGAGGTCGATCATTTCAAAGATGCAAACGAGGTTTTGATGTACTTGGGCCCTGAGGCCCTGAAGGAAGTTGTTGACAACGCAGAGTTGTATCCTATAAGTGGATTATTTCGCTTCAAAGATTACTTCCACGAGATTGATGCATATTATCACAAAAAATTTGGAAATGAGTTTGGTGTGCCGACTGGATGGAGGTGTCTCAATGATTTGTACAATGTGAGTTCAAACTAG

Protein sequence

MRFLHNNHCLYTPFSKLSSFSSPSCLMGSFPLCKSTSLVFLSHLSSSSSSSSQKYFLYRSISLLHGSFPVRPMSLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNILRKKLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGHTLAFADGRSSYKHLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGEMDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVSSN*

Homology

[Close]

BLAST of Cucsa.167370 vs. Swiss-Prot
Match: TWIH_ARATH (Twinkle homolog protein, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At1g30680 PE=1 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 2.7e-130
Identity = 252/454 (55.51%), Postives = 314/454 (69.16%), Query Frame = 1


Query: 14  FSKLSSFSSPSCLMGSFPLCKSTSLV-FLSHLSSSSSSSSQKYFLYRSISLLHGSF-PV- 73
           F KLS   S S LMGS    +   L  F S+ SS S SSS      R +S +   F PV 
Sbjct: 12  FRKLSC--SMSVLMGSKQFLEFCLLPSFASYPSSPSYSSS------RQVSSVSRRFRPVL 71

Query: 74  --RPMSLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNILRKKLQDLDID 133
             RP+S   P+  + NG+SS+ S   VP P    E   DK    +RL  LR+KL +  +D
Sbjct: 72  ASRPVSKNSPYYQRTNGLSSYNSIPRVPTPVDT-EVEADKRVVLSRLVTLRRKLAEQGVD 131

Query: 134 IEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGHTLAFADGR 193
            E C PGQ   L+CP C+GG+S E+S SL I+ DG +A WNCFRGKCG KG   A   G 
Sbjct: 132 AENCPPGQHSGLICPTCEGGNSGEKSLSLFIAPDGSSATWNCFRGKCGLKGGVRADG-GL 191

Query: 194 SSYKHLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQKRSDNQI 253
           +S   + +V      RKITVE ++LEPLCD++ DYFA R IS++TL RN VMQKR  ++I
Sbjct: 192 ASADPIEKVE-----RKITVEGIELEPLCDEIQDYFAARAISRKTLERNRVMQKRIGDEI 251

Query: 254 AVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGEMDKLSMAE 313
            +AFTY++ G L+SCKYR   K F+QE  T RI YG+DDI+  S++IIVEGE+DKL+M E
Sbjct: 252 VIAFTYWQRGELVSCKYRSLTKMFFQERKTRRILYGLDDIEKTSEVIIVEGEIDKLAMEE 311

Query: 314 AGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATDGDTPGQAL 373
           AG  NCVSVPDGAPA VS K++P  DKD K++FLWNC DYL KASRI++ATDGD PGQA+
Sbjct: 312 AGFLNCVSVPDGAPAKVSSKEIPSEDKDTKYKFLWNCNDYLKKASRIVIATDGDGPGQAM 371

Query: 374 AEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRF 433
           AEEIARR+G+ERCWRVKWPKK+E +HFKDANEVLM  GP  LKE + +AE YPI GLF F
Sbjct: 372 AEEIARRLGKERCWRVKWPKKSEDEHFKDANEVLMSKGPHLLKEAILDAEPYPILGLFSF 431

Query: 434 KDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 463
           KD+F EIDAYY +  G+E+GV TGW+ L++LY+V
Sbjct: 432 KDFFDEIDAYYDRTHGHEYGVSTGWKNLDNLYSV 450

[Close]

BLAST of Cucsa.167370 vs. Swiss-Prot
Match: PRIH_ARATH (Primase homolog protein OS=Arabidopsis thaliana GN=At1g30660 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 7.9e-98
Identity = 181/311 (58.20%), Postives = 227/311 (72.99%), Query Frame = 1


Query: 113 TRLNILRKKLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFR 172
           ++L  L +KL +  ID + C PG    L+CP C+ GDS E+S +L I  DG +A W C R
Sbjct: 33  SKLVTLMRKLSEQGIDAQNCPPGVRSCLICPKCEVGDSGEKSLTLYIYPDGSSAKWTC-R 92

Query: 173 GKCGWKGHTLAFADGRSSYKH-LGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISK 232
            KCG KG  +   DG+   K  +G+V      RKITVES++LEPLCD++ D+FA R IS 
Sbjct: 93  RKCGLKG--VLQVDGKLVSKDPIGKVE-----RKITVESIKLEPLCDEIQDFFAARAISG 152

Query: 233 QTLLRNSVMQKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGA 292
           +TL RN VMQKR D++I +AFTY++ G L+SCKYR   KKF QE NT +I YG+DDI+  
Sbjct: 153 KTLERNRVMQKRIDDEIVIAFTYWQRGELVSCKYRSLTKKFVQERNTRKILYGLDDIEET 212

Query: 293 SDIIIVEGEMDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNK 352
           S+IIIVEGE DKL+M EAG  NCVSVPDGAP +VS K++P   KD  F+++WNC DYL K
Sbjct: 213 SEIIIVEGEPDKLAMEEAGFFNCVSVPDGAPETVSSKEIPSESKDTAFKYIWNCNDYLKK 272

Query: 353 ASRIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALK 412
           ASRI++ATDGD PGQALAEE+ARR+G+ERCW VKWPKK+E +HFKDANEVLM  GP  LK
Sbjct: 273 ASRIVIATDGDGPGQALAEELARRLGKERCWLVKWPKKSEDEHFKDANEVLMSKGPHLLK 332

Query: 413 EVVDNAELYPI 423
           E + NAE YP+
Sbjct: 333 EAILNAEPYPL 335

[Close]

BLAST of Cucsa.167370 vs. TrEMBL
Match: A0A0A0LYM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G541890 PE=4 SV=1)

HSP 1 Score: 945.3 bits (2442), Expect = 2.9e-272
Identity = 458/462 (99.13%), Postives = 460/462 (99.57%), Query Frame = 1


Query: 1   MRFLHNNHCLYTPFSKLSSFSSPSCLMGSFPLCKSTSLVFLSHLSSSSSSSSQKYFLYRS 60
           MRFLHNNHCLYTPFSKLSSFSSPSCLMGSFPLCKSTSLVFLSHLSSSSSSSSQKYFLYRS
Sbjct: 1   MRFLHNNHCLYTPFSKLSSFSSPSCLMGSFPLCKSTSLVFLSHLSSSSSSSSQKYFLYRS 60

Query: 61  ISLLHGSFPVRPMSLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNILRK 120
           ISLLHGSFPVRP+SLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNILRK
Sbjct: 61  ISLLHGSFPVRPLSLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNILRK 120

Query: 121 KLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGH 180
           KLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGH
Sbjct: 121 KLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGH 180

Query: 181 TLAFADGRSSYKHLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVM 240
           TLAF DGRSSYK LGQVALKQNIRKITVESLQLEPLCD+LVDYFAERLISKQTLLRNSVM
Sbjct: 181 TLAFTDGRSSYKDLGQVALKQNIRKITVESLQLEPLCDELVDYFAERLISKQTLLRNSVM 240

Query: 241 QKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGE 300
           QKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGE
Sbjct: 241 QKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGE 300

Query: 301 MDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATD 360
           MDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATD
Sbjct: 301 MDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATD 360

Query: 361 GDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELY 420
           GDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELY
Sbjct: 361 GDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELY 420

Query: 421 PISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 463
           PISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV
Sbjct: 421 PISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 462

[Close]

BLAST of Cucsa.167370 vs. TrEMBL
Match: W9RPH9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026953 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 4.6e-153
Identity = 274/437 (62.70%), Postives = 334/437 (76.43%), Query Frame = 1


Query: 27  MGSFPLCKSTSLVFLSHLSSSSSSSSQKYFLYRSISLLHGSFPVRPMSLVKPFAM-KPNG 86
           MGS    KST   F + L+ +S        L  +  L   +FP +P S  +P  + K NG
Sbjct: 1   MGSKQFLKST--FFSNPLTPASHRR-----LSNTRKLPFSAFPSKPTSRTQPCCLIKTNG 60

Query: 87  VSSFTSHANVPRPPALLENPPDKASSSTRLNILRKKLQDLDIDIEACVPGQFYSLLCPMC 146
            SS  S A+ PR   +LE+P +K +S  R  IL++KL+DL ++ +  VPGQF  L+CPMC
Sbjct: 61  YSS-VSEASDPRA-VVLEDPEEKNASQFR--ILKQKLEDLGLECDISVPGQFNHLICPMC 120

Query: 147 KGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGHTLAFADGRSSYKHLGQVALKQNIRK 206
            GGD EERS SL I +DG +A+W CFR KCGW+G T AFA+ + +Y+   ++A  + IR+
Sbjct: 121 NGGDQEERSLSLFIEQDGSSALWVCFRAKCGWRGSTRAFAESKPAYERPNKIARIKKIRE 180

Query: 207 ITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQKRSDNQIAVAFTYYRGGALISCKY 266
           IT+E L LEP CD++V YF+ER+ISK+T+ RN+VMQKR D+Q A+AFTY+R G LISCKY
Sbjct: 181 ITIEDLGLEPPCDEIVAYFSERMISKETMQRNAVMQKRYDDQFAIAFTYWRNGNLISCKY 240

Query: 267 RDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGEMDKLSMAEAGIHNCVSVPDGAPASV 326
           RD NKKFWQE +TE+IFYG+DDI  ASDIIIVEGEMDKL+M EAG  NCVSVPDGAP  V
Sbjct: 241 RDINKKFWQEADTEKIFYGLDDIKEASDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPCV 300

Query: 327 SEKDVPPADKDKKFQFLWNCKDYLNKASRIILATDGDTPGQALAEEIARRVGRERCWRVK 386
           SEKD+PP + D K+Q+LWNCK+YL KASRIILATDGD PGQALAEE+ARRVGRERCWRVK
Sbjct: 301 SEKDLPPKETDTKYQYLWNCKEYLKKASRIILATDGDVPGQALAEELARRVGRERCWRVK 360

Query: 387 WPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDAYYHKKFGN 446
           WPKKNEVDHFKDANEVLMY+GP+ LKEV++NAELYPI GLF FKDYF EIDAYY++ FG+
Sbjct: 361 WPKKNEVDHFKDANEVLMYMGPDVLKEVIENAELYPIRGLFNFKDYFSEIDAYYYRTFGD 420

Query: 447 EFGVPTGWRCLNDLYNV 463
           EFG  TGWR LN LYNV
Sbjct: 421 EFGASTGWRSLNHLYNV 426

[Close]

BLAST of Cucsa.167370 vs. TrEMBL
Match: A0A059CFW7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01628 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 8.9e-149
Identity = 265/420 (63.10%), Postives = 321/420 (76.43%), Query Frame = 1


Query: 44  LSSSSSSSSQKYFLYRSISLLHGSFP-VRPMSLVKPFAMKPNGVSSFTSHANVPRPPALL 103
           LSSSSSSSS     +R    LH S    R  S + P  +K NGV     H+++PRP   L
Sbjct: 53  LSSSSSSSSLSRVRFRGAYGLHFSCARSRAGSRMNPSCLKANGVPH-RPHSSIPRP-VQL 112

Query: 104 ENPPDKASSSTRLNILRKKLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISED 163
           E P  +    T L +L+ +L++L ID++ C+PGQ++SLLCPMCKGG S ERS S+ +S D
Sbjct: 113 EGPVGRGIE-TPLKVLKMRLEELGIDMQTCLPGQYHSLLCPMCKGGRSMERSLSIFVSPD 172

Query: 164 GGAAVWNCFRGKCGWKGHTLAFADGRSSYKHLGQVALKQNIRKITVESLQLEPLCDQLVD 223
           GG+AVW CFRG CGWKG T A A  RSSY    Q +  + IR+I+ ESL LEPLC++LV 
Sbjct: 173 GGSAVWTCFRGSCGWKGSTRAAAKPRSSYATSNQTSKVKTIREISEESLGLEPLCNELVA 232

Query: 224 YFAERLISKQTLLRNSVMQKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIF 283
           YFAERLIS +TL RN+VMQK+ +NQI +AFTY R G L+SCKYRD  KKFWQE +TE+IF
Sbjct: 233 YFAERLISAETLRRNAVMQKKCENQIVIAFTYRREGKLVSCKYRDVKKKFWQEAHTEKIF 292

Query: 284 YGIDDIDGASDIIIVEGEMDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFL 343
           YG+DDI G S+IIIVEGEMDKL+M EAG  NCVSVPDGAP S S+KD+PP  +D K+Q+L
Sbjct: 293 YGLDDIKGKSEIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPSTSDKDLPPEGQDIKYQYL 352

Query: 344 WNCKDYLNKASRIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVL 403
           WNCKDYL +ASRIILATDGD PGQALAEE+ARR+GRERCWRVKWPKKN+ ++FKDANEVL
Sbjct: 353 WNCKDYLKEASRIILATDGDKPGQALAEELARRLGRERCWRVKWPKKNDSEYFKDANEVL 412

Query: 404 MYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 463
           MY+GP  L+EV+D+AELYPI GLF FKD+F EI+ YYH+  G EFGV TGW+ LN LYNV
Sbjct: 413 MYVGPGVLREVIDDAELYPIRGLFTFKDFFDEINGYYHRTLGYEFGVSTGWKSLNHLYNV 469

[Close]

BLAST of Cucsa.167370 vs. TrEMBL
Match: A0A059CGG0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01628 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 8.9e-149
Identity = 265/420 (63.10%), Postives = 321/420 (76.43%), Query Frame = 1


Query: 44  LSSSSSSSSQKYFLYRSISLLHGSFP-VRPMSLVKPFAMKPNGVSSFTSHANVPRPPALL 103
           LSSSSSSSS     +R    LH S    R  S + P  +K NGV     H+++PRP   L
Sbjct: 53  LSSSSSSSSLSRVRFRGAYGLHFSCARSRAGSRMNPSCLKANGVPH-RPHSSIPRP-VQL 112

Query: 104 ENPPDKASSSTRLNILRKKLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISED 163
           E P  +    T L +L+ +L++L ID++ C+PGQ++SLLCPMCKGG S ERS S+ +S D
Sbjct: 113 EGPVGRGIE-TPLKVLKMRLEELGIDMQTCLPGQYHSLLCPMCKGGRSMERSLSIFVSPD 172

Query: 164 GGAAVWNCFRGKCGWKGHTLAFADGRSSYKHLGQVALKQNIRKITVESLQLEPLCDQLVD 223
           GG+AVW CFRG CGWKG T A A  RSSY    Q +  + IR+I+ ESL LEPLC++LV 
Sbjct: 173 GGSAVWTCFRGSCGWKGSTRAAAKPRSSYATSNQTSKVKTIREISEESLGLEPLCNELVA 232

Query: 224 YFAERLISKQTLLRNSVMQKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIF 283
           YFAERLIS +TL RN+VMQK+ +NQI +AFTY R G L+SCKYRD  KKFWQE +TE+IF
Sbjct: 233 YFAERLISAETLRRNAVMQKKCENQIVIAFTYRREGKLVSCKYRDVKKKFWQEAHTEKIF 292

Query: 284 YGIDDIDGASDIIIVEGEMDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFL 343
           YG+DDI G S+IIIVEGEMDKL+M EAG  NCVSVPDGAP S S+KD+PP  +D K+Q+L
Sbjct: 293 YGLDDIKGKSEIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPSTSDKDLPPEGQDIKYQYL 352

Query: 344 WNCKDYLNKASRIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVL 403
           WNCKDYL +ASRIILATDGD PGQALAEE+ARR+GRERCWRVKWPKKN+ ++FKDANEVL
Sbjct: 353 WNCKDYLKEASRIILATDGDKPGQALAEELARRLGRERCWRVKWPKKNDSEYFKDANEVL 412

Query: 404 MYLGPEALKEVVDNAELYPISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 463
           MY+GP  L+EV+D+AELYPI GLF FKD+F EI+ YYH+  G EFGV TGW+ LN LYNV
Sbjct: 413 MYVGPGVLREVIDDAELYPIRGLFTFKDFFDEINGYYHRTLGYEFGVSTGWKSLNHLYNV 469

[Close]

BLAST of Cucsa.167370 vs. TrEMBL
Match: A0A061G8E8_THECC (Toprim domain-containing protein isoform 1 OS=Theobroma cacao GN=TCM_027034 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 2.9e-147
Identity = 271/448 (60.49%), Postives = 329/448 (73.44%), Query Frame = 1


Query: 16  KLSSFSSPSC-LMGSFPLCKSTSLVFLSHLSSSSSSSSQKYFLYRSISLLHGSFPVRPMS 75
           KLS FS  S  LM S     S SL+ L+      S+  ++   Y S          +P S
Sbjct: 18  KLSLFSCNSAALMASKTFSSSFSLLPLTPSPKRLSTPCKRLVPYLSS---------KPYS 77

Query: 76  LVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNILRKKLQDLDIDIEACVP 135
                +++ NG SS  S ANV  P    +   D+  +   L IL+ KL+ L IDI ACVP
Sbjct: 78  KNHSLSLRTNGFSSIPS-ANVSAP-VYSKELEDRPLNMRSLEILKHKLKQLGIDISACVP 137

Query: 136 GQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGHTLAFADGRSSYKHL 195
           G+   LLCP C GG+SEE S SL I++DG +A W CFR KCGWKG T AFADG+ SY +L
Sbjct: 138 GRENRLLCPSCNGGESEEISLSLFINQDGSSASWMCFRAKCGWKGITKAFADGKPSYANL 197

Query: 196 GQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQKRSDNQIAVAFTY 255
            +V   +  R+ITVESLQLEPLC+QL+ YFAER+IS +TL RN+VMQK+S  +IA+AF Y
Sbjct: 198 SRVNKVKVKREITVESLQLEPLCNQLIAYFAERMISAETLKRNAVMQKKSGEEIAIAFPY 257

Query: 256 YRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGEMDKLSMAEAGIHNC 315
           +R G+L++CKYRD  K+FWQE +TE+IFYG+DDI+ ASDIIIVEGE+DKL+M EAG  NC
Sbjct: 258 WRKGSLVNCKYRDIAKRFWQEKDTEKIFYGLDDIEDASDIIIVEGEIDKLAMEEAGFRNC 317

Query: 316 VSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATDGDTPGQALAEEIAR 375
           VSVPDGAP SVS K+VP  ++D K+Q+LWNCK+YL KASRIILATDGD PGQALAEE+AR
Sbjct: 318 VSVPDGAPPSVSSKEVPAEEQDTKYQYLWNCKEYLKKASRIILATDGDPPGQALAEELAR 377

Query: 376 RVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRFKDYFHE 435
           R+GRERCWRVKWPKKNEVDHFKDANEVLMYLGP  LK+V++NAELYPI GLF F+D+F E
Sbjct: 378 RLGRERCWRVKWPKKNEVDHFKDANEVLMYLGPSVLKDVIENAELYPIRGLFNFRDFFDE 437

Query: 436 IDAYYHKKFGNEFGVPTGWRCLNDLYNV 463
           ID YYH+  G EFGVPTGWR L+ LYNV
Sbjct: 438 IDRYYHRTLGYEFGVPTGWRALDGLYNV 454

[Close]

BLAST of Cucsa.167370 vs. TAIR10
Match: AT1G30680.1 (AT1G30680.1 toprim domain-containing protein)

HSP 1 Score: 466.8 bits (1200), Expect = 1.5e-131
Identity = 252/454 (55.51%), Postives = 314/454 (69.16%), Query Frame = 1


Query: 14  FSKLSSFSSPSCLMGSFPLCKSTSLV-FLSHLSSSSSSSSQKYFLYRSISLLHGSF-PV- 73
           F KLS   S S LMGS    +   L  F S+ SS S SSS      R +S +   F PV 
Sbjct: 12  FRKLSC--SMSVLMGSKQFLEFCLLPSFASYPSSPSYSSS------RQVSSVSRRFRPVL 71

Query: 74  --RPMSLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNILRKKLQDLDID 133
             RP+S   P+  + NG+SS+ S   VP P    E   DK    +RL  LR+KL +  +D
Sbjct: 72  ASRPVSKNSPYYQRTNGLSSYNSIPRVPTPVDT-EVEADKRVVLSRLVTLRRKLAEQGVD 131

Query: 134 IEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGHTLAFADGR 193
            E C PGQ   L+CP C+GG+S E+S SL I+ DG +A WNCFRGKCG KG   A   G 
Sbjct: 132 AENCPPGQHSGLICPTCEGGNSGEKSLSLFIAPDGSSATWNCFRGKCGLKGGVRADG-GL 191

Query: 194 SSYKHLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVMQKRSDNQI 253
           +S   + +V      RKITVE ++LEPLCD++ DYFA R IS++TL RN VMQKR  ++I
Sbjct: 192 ASADPIEKVE-----RKITVEGIELEPLCDEIQDYFAARAISRKTLERNRVMQKRIGDEI 251

Query: 254 AVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGEMDKLSMAE 313
            +AFTY++ G L+SCKYR   K F+QE  T RI YG+DDI+  S++IIVEGE+DKL+M E
Sbjct: 252 VIAFTYWQRGELVSCKYRSLTKMFFQERKTRRILYGLDDIEKTSEVIIVEGEIDKLAMEE 311

Query: 314 AGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATDGDTPGQAL 373
           AG  NCVSVPDGAPA VS K++P  DKD K++FLWNC DYL KASRI++ATDGD PGQA+
Sbjct: 312 AGFLNCVSVPDGAPAKVSSKEIPSEDKDTKYKFLWNCNDYLKKASRIVIATDGDGPGQAM 371

Query: 374 AEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELYPISGLFRF 433
           AEEIARR+G+ERCWRVKWPKK+E +HFKDANEVLM  GP  LKE + +AE YPI GLF F
Sbjct: 372 AEEIARRLGKERCWRVKWPKKSEDEHFKDANEVLMSKGPHLLKEAILDAEPYPILGLFSF 431

Query: 434 KDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 463
           KD+F EIDAYY +  G+E+GV TGW+ L++LY+V
Sbjct: 432 KDFFDEIDAYYDRTHGHEYGVSTGWKNLDNLYSV 450

[Close]

BLAST of Cucsa.167370 vs. TAIR10
Match: AT1G30660.1 (AT1G30660.1 nucleic acid binding;nucleic acid binding)

HSP 1 Score: 359.0 bits (920), Expect = 4.4e-99
Identity = 181/311 (58.20%), Postives = 227/311 (72.99%), Query Frame = 1


Query: 113 TRLNILRKKLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFR 172
           ++L  L +KL +  ID + C PG    L+CP C+ GDS E+S +L I  DG +A W C R
Sbjct: 33  SKLVTLMRKLSEQGIDAQNCPPGVRSCLICPKCEVGDSGEKSLTLYIYPDGSSAKWTC-R 92

Query: 173 GKCGWKGHTLAFADGRSSYKH-LGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISK 232
            KCG KG  +   DG+   K  +G+V      RKITVES++LEPLCD++ D+FA R IS 
Sbjct: 93  RKCGLKG--VLQVDGKLVSKDPIGKVE-----RKITVESIKLEPLCDEIQDFFAARAISG 152

Query: 233 QTLLRNSVMQKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGA 292
           +TL RN VMQKR D++I +AFTY++ G L+SCKYR   KKF QE NT +I YG+DDI+  
Sbjct: 153 KTLERNRVMQKRIDDEIVIAFTYWQRGELVSCKYRSLTKKFVQERNTRKILYGLDDIEET 212

Query: 293 SDIIIVEGEMDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNK 352
           S+IIIVEGE DKL+M EAG  NCVSVPDGAP +VS K++P   KD  F+++WNC DYL K
Sbjct: 213 SEIIIVEGEPDKLAMEEAGFFNCVSVPDGAPETVSSKEIPSESKDTAFKYIWNCNDYLKK 272

Query: 353 ASRIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALK 412
           ASRI++ATDGD PGQALAEE+ARR+G+ERCW VKWPKK+E +HFKDANEVLM  GP  LK
Sbjct: 273 ASRIVIATDGDGPGQALAEELARRLGKERCWLVKWPKKSEDEHFKDANEVLMSKGPHLLK 332

Query: 413 EVVDNAELYPI 423
           E + NAE YP+
Sbjct: 333 EAILNAEPYPL 335

[Close]

BLAST of Cucsa.167370 vs. NCBI nr
Match: gi|778662016|ref|XP_011659233.1| (PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 945.3 bits (2442), Expect = 4.1e-272
Identity = 458/462 (99.13%), Postives = 460/462 (99.57%), Query Frame = 1


Query: 1   MRFLHNNHCLYTPFSKLSSFSSPSCLMGSFPLCKSTSLVFLSHLSSSSSSSSQKYFLYRS 60
           MRFLHNNHCLYTPFSKLSSFSSPSCLMGSFPLCKSTSLVFLSHLSSSSSSSSQKYFLYRS
Sbjct: 1   MRFLHNNHCLYTPFSKLSSFSSPSCLMGSFPLCKSTSLVFLSHLSSSSSSSSQKYFLYRS 60

Query: 61  ISLLHGSFPVRPMSLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNILRK 120
           ISLLHGSFPVRP+SLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNILRK
Sbjct: 61  ISLLHGSFPVRPLSLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNILRK 120

Query: 121 KLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGH 180
           KLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGH
Sbjct: 121 KLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGH 180

Query: 181 TLAFADGRSSYKHLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVM 240
           TLAF DGRSSYK LGQVALKQNIRKITVESLQLEPLCD+LVDYFAERLISKQTLLRNSVM
Sbjct: 181 TLAFTDGRSSYKDLGQVALKQNIRKITVESLQLEPLCDELVDYFAERLISKQTLLRNSVM 240

Query: 241 QKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGE 300
           QKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGE
Sbjct: 241 QKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGE 300

Query: 301 MDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATD 360
           MDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATD
Sbjct: 301 MDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATD 360

Query: 361 GDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELY 420
           GDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELY
Sbjct: 361 GDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELY 420

Query: 421 PISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 463
           PISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV
Sbjct: 421 PISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 462

[Close]

BLAST of Cucsa.167370 vs. NCBI nr
Match: gi|778662022|ref|XP_011659237.1| (PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like isoform X1 [Cucumis sativus])

HSP 1 Score: 872.5 bits (2253), Expect = 3.4e-250
Identity = 425/462 (91.99%), Postives = 443/462 (95.89%), Query Frame = 1


Query: 1   MRFLHNNHCLYTPFSKLSSFSSPSCLMGSFPLCKSTSLVFLSHLSSSSSSSSQKYFLYRS 60
           MRFLH+NH LY PFSKLSSFSSP  LMGSFPLCKSTSLVFLSHLSSS    SQKYFLYRS
Sbjct: 1   MRFLHHNHRLYNPFSKLSSFSSPFRLMGSFPLCKSTSLVFLSHLSSSF---SQKYFLYRS 60

Query: 61  ISLLHGSFPVRPMSLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNILRK 120
           ISLLHGSFPVRP+SLVKPFAMKPNGVSSFTSHANVPRPPALL NPPDKAS STRLNILRK
Sbjct: 61  ISLLHGSFPVRPLSLVKPFAMKPNGVSSFTSHANVPRPPALLGNPPDKASISTRLNILRK 120

Query: 121 KLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGH 180
           KLQDLDIDIEACVPGQF SLLCPMCKGGD++ERSFSLNISEDG AAVWNCFRGKCGWKGH
Sbjct: 121 KLQDLDIDIEACVPGQFSSLLCPMCKGGDTKERSFSLNISEDGEAAVWNCFRGKCGWKGH 180

Query: 181 TLAFADGRSSYKHLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVM 240
           TLAFADGRSSYKHLGQVALKQNIRKITVESLQLEPLCD+LVDYFAERLISKQTLLRNSVM
Sbjct: 181 TLAFADGRSSYKHLGQVALKQNIRKITVESLQLEPLCDELVDYFAERLISKQTLLRNSVM 240

Query: 241 QKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGE 300
           QKRS+NQIAVAFTYYRGGALISCKYRDA K+FWQE  TE+IFYG+DDIDGASDIIIVEGE
Sbjct: 241 QKRSNNQIAVAFTYYRGGALISCKYRDAKKRFWQEAKTEKIFYGLDDIDGASDIIIVEGE 300

Query: 301 MDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATD 360
           +DKLSMAEAGIHNCVSVPDGAP SVS+K+VPPA + +KFQ+LWNC+DYLNKA RIILATD
Sbjct: 301 IDKLSMAEAGIHNCVSVPDGAPPSVSKKNVPPAHQARKFQYLWNCRDYLNKALRIILATD 360

Query: 361 GDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELY 420
           GDTPGQALAEEIARRVG+ERCWRVKWPKK+EVDHFKDANEVLMYLGPEALKEVVDNAELY
Sbjct: 361 GDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELY 420

Query: 421 PISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 463
           PISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV
Sbjct: 421 PISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 459

[Close]

BLAST of Cucsa.167370 vs. NCBI nr
Match: gi|778662024|ref|XP_011659240.1| (PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like isoform X2 [Cucumis sativus])

HSP 1 Score: 872.5 bits (2253), Expect = 3.4e-250
Identity = 425/462 (91.99%), Postives = 443/462 (95.89%), Query Frame = 1


Query: 1   MRFLHNNHCLYTPFSKLSSFSSPSCLMGSFPLCKSTSLVFLSHLSSSSSSSSQKYFLYRS 60
           MRFLH+NH LY PFSKLSSFSSP  LMGSFPLCKSTSLVFLSHLSSS    SQKYFLYRS
Sbjct: 1   MRFLHHNHRLYNPFSKLSSFSSPFRLMGSFPLCKSTSLVFLSHLSSSF---SQKYFLYRS 60

Query: 61  ISLLHGSFPVRPMSLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNILRK 120
           ISLLHGSFPVRP+SLVKPFAMKPNGVSSFTSHANVPRPPALL NPPDKAS STRLNILRK
Sbjct: 61  ISLLHGSFPVRPLSLVKPFAMKPNGVSSFTSHANVPRPPALLGNPPDKASISTRLNILRK 120

Query: 121 KLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGWKGH 180
           KLQDLDIDIEACVPGQF SLLCPMCKGGD++ERSFSLNISEDG AAVWNCFRGKCGWKGH
Sbjct: 121 KLQDLDIDIEACVPGQFSSLLCPMCKGGDTKERSFSLNISEDGEAAVWNCFRGKCGWKGH 180

Query: 181 TLAFADGRSSYKHLGQVALKQNIRKITVESLQLEPLCDQLVDYFAERLISKQTLLRNSVM 240
           TLAFADGRSSYKHLGQVALKQNIRKITVESLQLEPLCD+LVDYFAERLISKQTLLRNSVM
Sbjct: 181 TLAFADGRSSYKHLGQVALKQNIRKITVESLQLEPLCDELVDYFAERLISKQTLLRNSVM 240

Query: 241 QKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDIDGASDIIIVEGE 300
           QKRS+NQIAVAFTYYRGGALISCKYRDA K+FWQE  TE+IFYG+DDIDGASDIIIVEGE
Sbjct: 241 QKRSNNQIAVAFTYYRGGALISCKYRDAKKRFWQEAKTEKIFYGLDDIDGASDIIIVEGE 300

Query: 301 MDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDYLNKASRIILATD 360
           +DKLSMAEAGIHNCVSVPDGAP SVS+K+VPPA + +KFQ+LWNC+DYLNKA RIILATD
Sbjct: 301 IDKLSMAEAGIHNCVSVPDGAPPSVSKKNVPPAHQARKFQYLWNCRDYLNKALRIILATD 360

Query: 361 GDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPEALKEVVDNAELY 420
           GDTPGQALAEEIARRVG+ERCWRVKWPKK+EVDHFKDANEVLMYLGPEALKEVVDNAELY
Sbjct: 361 GDTPGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELY 420

Query: 421 PISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 463
           PISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV
Sbjct: 421 PISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 459

[Close]

BLAST of Cucsa.167370 vs. NCBI nr
Match: gi|659068706|ref|XP_008445781.1| (PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 839.7 bits (2168), Expect = 2.4e-240
Identity = 414/474 (87.34%), Postives = 434/474 (91.56%), Query Frame = 1


Query: 1   MRFLHNNHCLYTPFSKLSSFSSPSCLMGSFPLCKSTSLVFLSHLSSSSSSSS---QKYFL 60
           MRFLH+N CLY PFSKLSSFSSP CLMGSFPLCKSTSLVFLSHLSSSSSSSS   QKYFL
Sbjct: 1   MRFLHHNQCLYNPFSKLSSFSSPFCLMGSFPLCKSTSLVFLSHLSSSSSSSSSYSQKYFL 60

Query: 61  YRSISLLHGSFPVRPMSLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNI 120
           YRSISLLHGSFPVRP SLVKPFAMKPNG SSFTSHANVPRPPA  ENP DKA SST LNI
Sbjct: 61  YRSISLLHGSFPVRPTSLVKPFAMKPNGFSSFTSHANVPRPPAFSENPRDKALSSTLLNI 120

Query: 121 LRKKLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGW 180
           LRKKLQDL IDIEACVPGQF  LLCPMCKGGDS+ERSF+L+ISEDGGAAVWNCFRGKCGW
Sbjct: 121 LRKKLQDLGIDIEACVPGQFSGLLCPMCKGGDSKERSFALHISEDGGAAVWNCFRGKCGW 180

Query: 181 KGHTLAFADGRSSYKHLG---------QVALKQNIRKITVESLQLEPLCDQLVDYFAERL 240
           KGHTLA A+ RSSY+ LG         +VALKQNIRKITVESLQLEPLCDQ+V YFAERL
Sbjct: 181 KGHTLALAEDRSSYQDLGRVALKQDLGRVALKQNIRKITVESLQLEPLCDQVVAYFAERL 240

Query: 241 ISKQTLLRNSVMQKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDI 300
           ISK+TLLRNSVMQK   +QIA+AFTYYRGGAL+SCKYRD NKKFWQE NTE+IFYGIDDI
Sbjct: 241 ISKETLLRNSVMQKTFGDQIAIAFTYYRGGALVSCKYRDVNKKFWQEANTEKIFYGIDDI 300

Query: 301 DGASDIIIVEGEMDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDY 360
           +GASDIIIVEGE+DKLSMAEAGIHNCVSVPDGAP SVS+KDVP AD+DKK+QFLWNCK+Y
Sbjct: 301 EGASDIIIVEGEIDKLSMAEAGIHNCVSVPDGAPPSVSKKDVPSADQDKKYQFLWNCKNY 360

Query: 361 LNKASRIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPE 420
           LNKASRIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPE
Sbjct: 361 LNKASRIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPE 420

Query: 421 ALKEVVDNAELYPISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 463
           ALKEVVDNAELYPISGLF FKDYFHEIDAYYHKKFG EFGVPTGW  LN+LYNV
Sbjct: 421 ALKEVVDNAELYPISGLFNFKDYFHEIDAYYHKKFGFEFGVPTGWNSLNNLYNV 474

[Close]

BLAST of Cucsa.167370 vs. NCBI nr
Match: gi|659068709|ref|XP_008445786.1| (PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 839.7 bits (2168), Expect = 2.4e-240
Identity = 414/474 (87.34%), Postives = 434/474 (91.56%), Query Frame = 1


Query: 1   MRFLHNNHCLYTPFSKLSSFSSPSCLMGSFPLCKSTSLVFLSHLSSSSSSSS---QKYFL 60
           MRFLH+N CLY PFSKLSSFSSP CLMGSFPLCKSTSLVFLSHLSSSSSSSS   QKYFL
Sbjct: 1   MRFLHHNQCLYNPFSKLSSFSSPFCLMGSFPLCKSTSLVFLSHLSSSSSSSSSYSQKYFL 60

Query: 61  YRSISLLHGSFPVRPMSLVKPFAMKPNGVSSFTSHANVPRPPALLENPPDKASSSTRLNI 120
           YRSISLLHGSFPVRP SLVKPFAMKPNG SSFTSHANVPRPPA  ENP DKA SST LNI
Sbjct: 61  YRSISLLHGSFPVRPTSLVKPFAMKPNGFSSFTSHANVPRPPAFSENPRDKALSSTLLNI 120

Query: 121 LRKKLQDLDIDIEACVPGQFYSLLCPMCKGGDSEERSFSLNISEDGGAAVWNCFRGKCGW 180
           LRKKLQDL IDIEACVPGQF  LLCPMCKGGDS+ERSF+L+ISEDGGAAVWNCFRGKCGW
Sbjct: 121 LRKKLQDLGIDIEACVPGQFSGLLCPMCKGGDSKERSFALHISEDGGAAVWNCFRGKCGW 180

Query: 181 KGHTLAFADGRSSYKHLG---------QVALKQNIRKITVESLQLEPLCDQLVDYFAERL 240
           KGHTLA A+ RSSY+ LG         +VALKQNIRKITVESLQLEPLCDQ+V YFAERL
Sbjct: 181 KGHTLALAEDRSSYQDLGRVALKQDLGRVALKQNIRKITVESLQLEPLCDQVVAYFAERL 240

Query: 241 ISKQTLLRNSVMQKRSDNQIAVAFTYYRGGALISCKYRDANKKFWQEPNTERIFYGIDDI 300
           ISK+TLLRNSVMQK   +QIA+AFTYYRGGAL+SCKYRD NKKFWQE NTE+IFYGIDDI
Sbjct: 241 ISKETLLRNSVMQKTFGDQIAIAFTYYRGGALVSCKYRDVNKKFWQEANTEKIFYGIDDI 300

Query: 301 DGASDIIIVEGEMDKLSMAEAGIHNCVSVPDGAPASVSEKDVPPADKDKKFQFLWNCKDY 360
           +GASDIIIVEGE+DKLSMAEAGIHNCVSVPDGAP SVS+KDVP AD+DKK+QFLWNCK+Y
Sbjct: 301 EGASDIIIVEGEIDKLSMAEAGIHNCVSVPDGAPPSVSKKDVPSADQDKKYQFLWNCKNY 360

Query: 361 LNKASRIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPE 420
           LNKASRIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPE
Sbjct: 361 LNKASRIILATDGDTPGQALAEEIARRVGRERCWRVKWPKKNEVDHFKDANEVLMYLGPE 420

Query: 421 ALKEVVDNAELYPISGLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNV 463
           ALKEVVDNAELYPISGLF FKDYFHEIDAYYHKKFG EFGVPTGW  LN+LYNV
Sbjct: 421 ALKEVVDNAELYPISGLFNFKDYFHEIDAYYHKKFGFEFGVPTGWNSLNNLYNV 474

The following BLAST results are available for this feature:

BLAST of Cucsa.167370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TWIH_ARATH	2.7e-130	55.51	Twinkle homolog protein, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=...	[more]
PRIH_ARATH	7.9e-98	58.20	Primase homolog protein OS=Arabidopsis thaliana GN=At1g30660 PE=3 SV=1	[more]

BLAST of Cucsa.167370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYM8_CUCSA	2.9e-272	99.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G541890 PE=4 SV=1	[more]
W9RPH9_9ROSA	4.6e-153	62.70	Uncharacterized protein OS=Morus notabilis GN=L484_026953 PE=4 SV=1	[more]
A0A059CFW7_EUCGR	8.9e-149	63.10	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01628 PE=4 SV=1	[more]
A0A059CGG0_EUCGR	8.9e-149	63.10	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01628 PE=4 SV=1	[more]
A0A061G8E8_THECC	2.9e-147	60.49	Toprim domain-containing protein isoform 1 OS=Theobroma cacao GN=TCM_027034 PE=4...	[more]

BLAST of Cucsa.167370 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30680.1	1.5e-131	55.51	toprim domain-containing protein	[more]
AT1G30660.1	4.4e-99	58.20	nucleic acid binding;nucleic acid binding	[more]

BLAST of Cucsa.167370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778662016\|ref\|XP_011659233.1\|	4.1e-272	99.13	PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Cucumis sativus...	[more]
gi\|778662022\|ref\|XP_011659237.1\|	3.4e-250	91.99	PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like isoform X1 ...	[more]
gi\|778662024\|ref\|XP_011659240.1\|	3.4e-250	91.99	PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like isoform X2 ...	[more]
gi\|659068706\|ref\|XP_008445781.1\|	2.4e-240	87.34	PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucu...	[more]
gi\|659068709\|ref\|XP_008445786.1\|	2.4e-240	87.34	PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X2 [Cucu...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006171	TOPRIM_domain
IPR027032	Twinkle-like protein

Vocabulary: **Molecular Function**
Term	Definition
GO:0003697	single-stranded DNA binding
GO:0043139	5'-3' DNA helicase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006260	DNA replication
biological_process	GO:0008150	biological_process
cellular_component	GO:0005657	replication fork
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043139	5'-3' DNA helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.167370.1	Cucsa.167370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006171	Toprim domain	PFAM	PF13662	Toprim_4	coord: 293..384 score: 1.4
IPR006171	Toprim domain	SMART	SM00493	toprim5	coord: 292..381 score: 3.
IPR006171	Toprim domain	PROFILE	PS50880	TOPRIM	coord: 292..410 score: 10
IPR027032	Twinkle-like protein	PANTHER	PTHR12873	T7-LIKE MITOCHONDRIAL DNA HELICASE	coord: 49..323 score: 2.2E-138coord: 341..461 score: 2.2E
None	No IPR available	GENE3D	G3DSA:3.40.1360.10		coord: 279..420 score: 8.2
None	No IPR available	unknown	SSF56731	DNA primase core	coord: 224..403 score: 3.27

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.167370	Cla019747	Watermelon (97103) v1	cgywmB313
Cucsa.167370	MELO3C002866	Melon (DHL92) v3.5.1	cgymeB297
Cucsa.167370	CmaCh18G005250	Cucurbita maxima (Rimu)	cgycmaB0476
Cucsa.167370	CmoCh18G005040	Cucurbita moschata (Rifu)	cgycmoB0479
Cucsa.167370	Cp4.1LG09g07090	Cucurbita pepo (Zucchini)	cgycpeB0462
Cucsa.167370	MELO3C035679.2	Melon (DHL92) v3.6.1	cgymedB290
Cucsa.167370	Bhi08G000817	Wax gourd	cgywgoB345
Cucsa.167370	Carg25391	Silver-seed gourd	carcgyB0517

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.167370	Watermelon (97103) v2	cgywmbB300
Cucsa.167370	Cucurbita maxima (Rimu)	cgycmaB0475
Cucsa.167370	Cucurbita moschata (Rifu)	cgycmoB0478
Cucsa.167370	Wild cucumber (PI 183967)	cgycpiB262
Cucsa.167370	Cucumber (Chinese Long) v2	cgycuB255
Cucsa.167370	Watermelon (Charleston Gray)	cgywcgB296
Cucsa.167370	Cucurbita pepo (Zucchini)	cgycpeB0463
Cucsa.167370	Bottle gourd (USVL1VR-Ls)	cgylsiB278
Cucsa.167370	Silver-seed gourd	carcgyB0462
Cucsa.167370	Cucumber (Chinese Long) v3	cgycucB267