Cucsa.166210 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.166210
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Pentatricopeptide repeat-containing protein family
Location	scaffold01153 : 1461758 .. 1464268 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACATACTTTTTTAGGAATCATTGCTAATGACGTTTTCAGCAACTTTAATGGAAGAACAGATGCCTCATGGAATGCCATGATATTGGGTTATGCTAAGAATGGAAGAGTGAGGGAGTGAGGGAGTGAGGCTTTGAATGGTTTTTATGAAACGCAATCTCTGGGTATGAAATGTCAAACCTGCTCTTCCAGAATCATCAATTACTCGCTAGGCAAAATTAATTGATGGACTCGTTATTGGATCTTGTTCGGGCAACGACAATTTTGTAACAATCGCTCTTGTGGGACATGTATGCAAAATGTGGAGTCATTCATATGACAAGGAAGCTTTTTTATTTTACATGAGCAATAAACGACATGTCATAACATAGAATGTGATGATAGATGGAATGGAACGCCTAGACTTGAAAAGACTCTTCCATATTTCTTTGAAAATATGAAAAAAAAAGGAAGAGTAGAGTCAAATTATATTACATTTTTATCTGTCATCTCTGCTTGCCGGACTCTGCCATTTAGATTGGAGGCTTCAATGGATCACTACGGTGCTGTGGTTGACCTTATCGGTCGAGCTAGCAGGATCAAAGAAGTCTCGGATTGTACTCAAAACATGCCTATTGGTCTAGGGATTACTGTATGTGGTGCTACGTTGGATGCTAGTAAATTCACAAAAATGTTGAATTGGGAGGGAGCCGCTACAAACTATTTGAGTTGAACCCGGAGGAAGGTGGCTACTATGTCTTGCTTGCGGATATTTATGCTTCTGCTTCAAAACGGAATAAGTTAGCTGAAGTAAAAAAAAGCAATATAATAAAGAAGCAGTGGCTTAAGAAAACTCCCGGTTGTAGCTCGGTGGAGTTGAGAAATGATGTTCATTTTCTCTATTCAGCAAGCACAACTCATCCACAATTCAAGAGAACATATGCCTTAAACTTGGGAAATGAAATCAAGACAGCTAGCTATGTGCCCGACACTAACTTGATTAACAATGTAGAAGGCGATGTGCAAGAACAGCTCCTCAATAGCCATAGTAAACAGCTTGCCGTTGCTTTTGGTCATTTAAATACTAGTCCCGGTACTACGATACTTGTCCGAAAGATTAGGAAGGGAAAAACAAAAGGCCGCTCATTTCGAGGTCATTGGAACTAGAGTTAGGCTACATACTTAGCAACATTAAGAAATATACAACAATAGATTTAGCTAAGAGCCTTAAAATTGAAAAGGAAAACAACAGAACTCTCCCACTTTGAAAGAGAGAGAGATCTTGAAAATCTGAAAAAGCAGTGTTCTGAAACAGTAGGCTCAATAACAACAAAAATGGTCCTCCATTTGAAGATAATGATGCTGAAATTTAAACTATAAGAAGAGAAGACTGTTAACTTACAGCTTTCCAATCCTATAGAACAGAACTGGTTTCGGCTGTGACATTGCCCCGGTATATGTCCATTAGCTTTGGTATTTCATCCAAATGCTTTAGAACATAAGTCTCCACAAATTGTCTCTCCACTAGTGTTAGCGCCCGAGCAACCTTTCTGTCCTTAAGAAGATTTTTTACCTTCAAAACCTCAAGAACTTTGTACCTTGGCCAGAGCTTGTCGACTGAATACGTGAAGAACTTAGGGTAAGAAATTACAGTTTCTGGATCCAACTTCGCAGTGTTGAAACAGAAATCTGCAACATCCCTAAATGCCTCCTCTGAACGAGCTAAACAAATTGGCTGTCTCTTAAATAGTGTAAGTATCTCATTCTCAGACCATCCTAAACTCTTCAAAACATTTATTTTCTTCTTCCAGGTTGAATCACTCATTGCACACCTTACTCTAAGAGCATGAAGAAACCTAGCAGACTTTGGTTCAATGCCCAATTCTTTAACCATTTTCACTACTTGAATCATTCTATCAACCGTATGCATTATAGTTCTAGAATTATATGCAATCAGTTTTGCTATATTGCTAGAAGGTACTCCTTCACTGGCTAAAACATCAATGTTAGATTTTAAAATACCCTTAAAATCAGAAGTTAGAAGCCAGGGAGAACGACGAATAGCACTAATTACTTGTTCATCCGATCCAAGCATTTCCTTTAGGAAAAAAAACAATGGTTTTAACTGAGAATCTAAGTTCCTGTAAAGAATCCAAGGGTTTGATAGGAATAGCTTAAAAAGTAAAGGACCGACGAACCCGATTTCCTGGAGGAACTCGAATTTAGGCTTCAGATTGTTGGATACTCTGGATTGAAGGATGAAAGGTCGCTTGGAGACCAACTTGGCGATCTCTGAATCCTCGAATCCATGCGATTTCAAGAAACCGATAATGGCTTCGTACTGCTGGATGTTTTTTTCATCGAATTGGAACTTTCGACCGGCGACGAAAGAAGGAGATTCTGAAGAAAGGCGACATGAATTTTTGAGGAATTCGAGGGTAGAAACAGAGGGCAAAGGCAATGTAGAAGTAGAAATGGTATTGAGAGAACGTTTTTGGAAGAAATGTAGAAGAAAAGTGGAGGAAAATTTGA

mRNA sequence

CAAACATACTTTTTTAGGAATCATTGCTAATGACGTTTTCAGCAACTTTAATGGAAGAACAGATGCCTCATGGAATGCCATGATATTGGGTTATGCTAAGAATGGAAGAGTGAGGGAATGGAATGGAACGCCTAGACTTGAAAAGACTCTTCCATATTTCTTTGAAAATATGAAAAAAAAAGGAAGAGTAGAGTCAAATTATATTACATTTTTATCTGTCATCTCTGCTTGCCGGACTCTGCCATTTAGATTGGAGGCTTCAATGGATCACTACGGTGCTGTGGTTGACCTTATCGGTCGAGCTAGCAGGATCAAAGAAGTCTCGGATTGTACTCAAAACATGCCTATTGGTCTAGGGATTACTGTATGTGGTGCTACGTTGGATGCTAGGAGCCGCTACAAACTATTTGAGTTGAACCCGGAGGAAGGTGGCTACTATGTCTTGCTTGCGGATATTTATGCTTCTGCTTCAAAACGGAATAAGTTAGCTGAAGTAAAAAAAAGCAATATAATAAAGAAGCAGTGGCTTAAGAAAACTCCCGGTTGTAGCTCGGTGGAGTTGAGAAATGATGTTCATTTTCTCTATTCAGCAAGCACAACTCATCCACAATTCAAGAGAACATATGCCTTAAACTTGGGAAATGAAATCAAGACAGCTAGCTATGTGCCCGACACTAACTTGATTAACAATGTAGAAGGCGATGTGCAAGAACAGCTCCTCAATAGCCATAGTAAACAGCTTGCCGTTGCTTTTGGTCATTTAAATACTAGTCCCGGTACTACGATACTTGTCCGAAAGATTAGGAAGGGAAAAACAAAAGGCCGCTCATTTCGAGGTCATTGGAACTAGAGTTAGGCTACATACTTAGCAACATTAAGAAATATACAACAATAGATTTAGCTAAGAGCCTTAAAATTGAAAAGGAAAACAACAGAACTCTCCCACTTTGAAAGAGAGAGAGATCTTGAAAATCTGAAAAAGCAGTGTTCTGAAACAGTAGGCTCAATAACAACAAAAATGGTCCTCCATTTGAAGATAATGATGCTGAAATTTAAACTATAAGAAGAGAAGACTGTTAACTTACAGCTTTCCAATCCTATAGAACAGAACTGGTTTCGGCTGTGACATTGCCCCGGTATATGTCCATTAGCTTTGGTATTTCATCCAAATGCTTTAGAACATAAGTCTCCACAAATTGTCTCTCCACTAGTGTTAGCGCCCGAGCAACCTTTCTGTCCTTAAGAAGATTTTTTACCTTCAAAACCTCAAGAACTTTGTACCTTGGCCAGAGCTTGTCGACTGAATACGTGAAGAACTTAGGGTAAGAAATTACAGTTTCTGGATCCAACTTCGCAGTGTTGAAACAGAAATCTGCAACATCCCTAAATGCCTCCTCTGAACGAGCTAAACAAATTGGCTGTCTCTTAAATAGTGTAAGTATCTCATTCTCAGACCATCCTAAACTCTTCAAAACATTTATTTTCTTCTTCCAGGTTGAATCACTCATTGCACACCTTACTCTAAGAGCATGAAGAAACCTAGCAGACTTTGGTTCAATGCCCAATTCTTTAACCATTTTCACTACTTGAATCATTCTATCAACCGTATGCATTATAGTTCTAGAATTATATGCAATCAGTTTTGCTATATTGCTAGAAGGTACTCCTTCACTGGCTAAAACATCAATGTTAGATTTTAAAATACCCTTAAAATCAGAAGTTAGAAGCCAGGGAGAACGACGAATAGCACTAATTACTTGTTCATCCGATCCAAGCATTTCCTTTAGGAAAAAAAACAATGGTTTTAACTGAGAATCTAAGTTCCTGTAAAGAATCCAAGGGTTTGATAGGAATAGCTTAAAAAGTAAAGGACCGACGAACCCGATTTCCTGGAGGAACTCGAATTTAGGCTTCAGATTGTTGGATACTCTGGATTGAAGGATGAAAGGTCGCTTGGAGACCAACTTGGCGATCTCTGAATCCTCGAATCCATGCGATTTCAAGAAACCGATAATGGCTTCGTACTGCTGGATGTTTTTTTCATCGAATTGGAACTTTCGACCGGCGACGAAAGAAGGAGATTCTGAAGAAAGGCGACATGAATTTTTGAGGAATTCGAGGGTAGAAACAGAGGGCAAAGGCAATGTAGAAGTAGAAATGGTATTGAGAGAACGTTTTTGGAAGAAATGTAGAAGAAAAGTGGAGGAAAATTTGA

Coding sequence (CDS)

ATGATATTGGGTTATGCTAAGAATGGAAGAGTGAGGGAATGGAATGGAACGCCTAGACTTGAAAAGACTCTTCCATATTTCTTTGAAAATATGAAAAAAAAAGGAAGAGTAGAGTCAAATTATATTACATTTTTATCTGTCATCTCTGCTTGCCGGACTCTGCCATTTAGATTGGAGGCTTCAATGGATCACTACGGTGCTGTGGTTGACCTTATCGGTCGAGCTAGCAGGATCAAAGAAGTCTCGGATTGTACTCAAAACATGCCTATTGGTCTAGGGATTACTGTATGTGGTGCTACGTTGGATGCTAGGAGCCGCTACAAACTATTTGAGTTGAACCCGGAGGAAGGTGGCTACTATGTCTTGCTTGCGGATATTTATGCTTCTGCTTCAAAACGGAATAAGTTAGCTGAAGTAAAAAAAAGCAATATAATAAAGAAGCAGTGGCTTAAGAAAACTCCCGGTTGTAGCTCGGTGGAGTTGAGAAATGATGTTCATTTTCTCTATTCAGCAAGCACAACTCATCCACAATTCAAGAGAACATATGCCTTAAACTTGGGAAATGAAATCAAGACAGCTAGCTATGTGCCCGACACTAACTTGATTAACAATGTAGAAGGCGATGTGCAAGAACAGCTCCTCAATAGCCATAGTAAACAGCTTGCCGTTGCTTTTGGTCATTTAAATACTAGTCCCGGTACTACGATACTTGTCCGAAAGATTAGGAAGGGAAAAACAAAAGGCCGCTCATTTCGAGGTCATTGGAACTAG

Protein sequence

MILGYAKNGRVREWNGTPRLEKTLPYFFENMKKKGRVESNYITFLSVISACRTLPFRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDARSRYKLFELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKKTPGCSSVELRNDVHFLYSASTTHPQFKRTYALNLGNEIKTASYVPDTNLINNVEGDVQEQLLNSHSKQLAVAFGHLNTSPGTTILVRKIRKGKTKGRSFRGHWN*

Homology

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BLAST of Cucsa.166210 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.0e-51
Identity = 122/274 (44.53%), Postives = 162/274 (59.12%), Query Frame = 1


Query: 1   MILGYAKNGRVREWN------GTPRLEKTLPYFFENMKKKGRVESNYITFLSVISACRTL 60
           +I        V  WN      GT    K     FE M+K G ++ N +TFLSVISAC   
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-GTIKPNGVTFLSVISACSHS 553

Query: 61  P---------------FRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGA 120
                           + +E SMDHYGA+VDL+GRA R+ E  D    MP+   + V GA
Sbjct: 554 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 613

Query: 121 TLDA-----------RSRYKLFELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQ 180
            L A           ++  +LFELNP++GGY+VLLA+IY +AS   K+ +V+ S +  +Q
Sbjct: 614 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSML--RQ 673

Query: 181 WLKKTPGCSSVELRNDVHFLYSASTTHPQFKRTYAL--NLGNEIKTASYVPDTNLINNVE 240
            L+KTPGCS VE++N+VH  +S ST HP  K+ YA    L   IK A YVPDTNL+  VE
Sbjct: 674 GLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVE 733

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BLAST of Cucsa.166210 vs. Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 6.0e-31
Identity = 88/234 (37.61%), Postives = 127/234 (54.27%), Query Frame = 1


Query: 37  VESNYITFLSVISACRTL---------------PFRLEASMDHYGAVVDLIGRASRIKEV 96
           V+ N +TF+SV +AC                   + +E S DHY  VVDL+GRA RIKE 
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673

Query: 97  SDCTQNMPIGLGITVCGATLDARSRY------------KLFELNPEEGGYYVLLADIYAS 156
                 MP         ++L   SR              L +L P    +YVLLA+IY+S
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 733

Query: 157 ASKRNKLAEVKKSNIIKKQWLKKTPGCSSVELRNDVHFLYSASTTHPQFKRT--YALNLG 216
           A   +K  EV+++  +K+Q ++K PGCS +E  ++VH   +  ++HPQ ++   Y   L 
Sbjct: 734 AGLWDKATEVRRN--MKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLW 793

Query: 217 NEIKTASYVPDTN-LINNVEGDVQEQLLNSHSKQLAVAFGHLNTSPGTTILVRK 241
             ++   YVPDT+ +++NVE D +E LL  HS++LA+AFG LNTSPGT I V K
Sbjct: 794 ERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAK 845

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BLAST of Cucsa.166210 vs. Swiss-Prot
Match: PP140_ARATH (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.8e-26
Identity = 89/271 (32.84%), Postives = 137/271 (50.55%), Query Frame = 1


Query: 1   MILGYAKNGRVREWNGTPRLEKTLPYFFENMKKKGRVESNYITFLSVISAC--------- 60
           MI+GYA NG  RE         TL   F  M+ +G +  NY+TFL V+SAC         
Sbjct: 282 MIVGYAMNGDSRE-------ALTL---FTTMQNEG-LRPNYVTFLGVLSACSHAGLVNEG 341

Query: 61  --------RTLPFRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDA 120
                   ++    LE   +HY  +VDL+GR+  ++E  +  + MP+     + GA L A
Sbjct: 342 KRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGA 401

Query: 121 RSRYK-----------LFELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKK 180
            + ++           L E  P+ G Y+VLL++IYA+A K + + +V+    ++K   KK
Sbjct: 402 CAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSK--MRKLGTKK 461

Query: 181 TPGCSSVELRNDVHFLYSASTTHPQFKRTYAL--NLGNEIKTASYVPDT-NLINNVEGDV 240
               SSVE    +HF      +HPQ K  Y     +  +I+   YVPDT ++ ++VE + 
Sbjct: 462 VAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEE 521

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BLAST of Cucsa.166210 vs. Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.9e-26
Identity = 81/270 (30.00%), Postives = 137/270 (50.74%), Query Frame = 1


Query: 1   MILGYAKNGRVREWNGTPRLEKTLPYFFENMKKKGRVESNYITFLSVISACRTL------ 60
           +I GYA +G  RE      + K     F  M+K G ++ N ITF +V++AC         
Sbjct: 319 LISGYAYHGHGRE-----AISK-----FMEMQKMG-IKPNVITFTAVLTACSYTGLVEEG 378

Query: 61  ---------PFRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDARS 120
                     + L+ +++HYG +VDL+GRA  + E     Q MP+     + GA L A  
Sbjct: 379 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 438

Query: 121 RYKLFEL-----------NPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKKTP 180
            +K  EL           +P  GG YV  A+I+A   K +K AE ++  ++K+Q + K P
Sbjct: 439 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRR--LMKEQGVAKVP 498

Query: 181 GCSSVELRNDVHFLYSASTTHPQFKRTYA--LNLGNEIKTASYVPDTN--LINNVEGDVQ 240
           GCS++ L    H   +   +HP+ ++  +    +  +++   YVP+    L++ V+ D +
Sbjct: 499 GCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDER 558

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BLAST of Cucsa.166210 vs. Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 9.9e-26
Identity = 79/242 (32.64%), Postives = 131/242 (54.13%), Query Frame = 1


Query: 28  FENMKKKGRVESNYITFLSVISACR---------------TLPFRLEASMDHYGAVVDLI 87
           F+ M  +G V+ ++ITF++++SAC                   + +  S+ HYG +VD+ 
Sbjct: 540 FKEMLDEG-VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 599

Query: 88  GRASRIKEVSDCTQNMPIGLGITVCGATLDARSRY-----------KLFELNPEEGGYYV 147
           GRA +++      ++M +    ++ GA L A   +            LFE+ PE  GY+V
Sbjct: 600 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 659

Query: 148 LLADIYASASKRNKLAEVKKSNIIKKQWLKKTPGCSSVELRNDVHFLYSASTTHPQFKRT 207
           LL+++YASA K   + E++  +I   + L+KTPG SS+E+ N V   Y+ + THP ++  
Sbjct: 660 LLSNMYASAGKWEGVDEIR--SIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEM 719

Query: 208 Y--ALNLGNEIKTASYVPDTN-LINNVEGDVQEQLLNSHSKQLAVAFGHLNTSPGTTILV 241
           Y     L  ++K   YVPD   ++ +VE D +E +L SHS++LA+AF  + T   TTI +
Sbjct: 720 YRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRI 778

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BLAST of Cucsa.166210 vs. TrEMBL
Match: A0A0A0KNI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175680 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.2e-110
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 1


Query: 31  MKKKGRVESNYITFLSVISACRTLPFRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPI 90
           MKKKGRVESNYITFLSVISACRTLPFRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPI
Sbjct: 1   MKKKGRVESNYITFLSVISACRTLPFRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPI 60

Query: 91  GLGITVCGATLDARSRYKLFELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWL 150
           GLGITVCGATLDARSRYKLFELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWL
Sbjct: 61  GLGITVCGATLDARSRYKLFELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWL 120

Query: 151 KKTPGCSSVELRNDVHFLYSASTTHPQFKRTYALNLGNEIKTASYVPDTNLINNVEGDVQ 210
           KKTPGCSSVELRNDVHFLYSASTTHPQFKRTYALNLGNEIKTASYVPDTNLINNVEGDVQ
Sbjct: 121 KKTPGCSSVELRNDVHFLYSASTTHPQFKRTYALNLGNEIKTASYVPDTNLINNVEGDVQ 180

Query: 211 EQLLNSHSKQLAVAFGHLNTSPGT 235
           EQLLNSHSKQLAVAFGHLNTSPG+
Sbjct: 181 EQLLNSHSKQLAVAFGHLNTSPGS 204

[Close]

BLAST of Cucsa.166210 vs. TrEMBL
Match: A0A0A0KPP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G583260 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.4e-63
Identity = 149/253 (58.89%), Postives = 173/253 (68.38%), Query Frame = 1


Query: 16  GTPRLEKTLPYFFENMKKKGRVESNYITFLSVISACR---------------TLPFRLEA 75
           GT  L +     F+ MKK G VE N IT+LSVISAC                   + LE 
Sbjct: 527 GTHGLGRAALDLFDKMKK-GAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEP 586

Query: 76  SMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDA-----------RSRYKL 135
           SMDHYGA+VDL+GRA RIKE  D  +NMPI  GITV GA L A           ++  KL
Sbjct: 587 SMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKL 646

Query: 136 FELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKKTPGCSSVELRNDVHFLY 195
           FELNP+EGGY+VLLA+IYAS SK +K+AEV+K+  ++K+ LKKTPGCS VELRN+VH  Y
Sbjct: 647 FELNPDEGGYHVLLANIYASTSKWSKVAEVRKT--MEKKGLKKTPGCSVVELRNEVHSFY 706

Query: 196 SASTTHPQFKRTYAL--NLGNEIKTASYVPDTNLINNVEGDVQEQLLNSHSKQLAVAFGH 241
           S STTHPQ KR YA    L  EIK A YVPDTNLI +VE DVQEQLLNSHS++LA+AFG 
Sbjct: 707 SGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGL 766

[Close]

BLAST of Cucsa.166210 vs. TrEMBL
Match: A0A059BIH8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03194 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.8e-57
Identity = 134/253 (52.96%), Postives = 170/253 (67.19%), Query Frame = 1


Query: 16  GTPRLEKTLPYFFENMKKKGRVESNYITFLSVISAC---------------RTLPFRLEA 75
           GT  L ++    F+ M+K G V  N ITFL ++SAC                   + +E 
Sbjct: 466 GTHGLGRSAVQLFKAMQK-GTVRPNDITFLCILSACSHSGLVDEGLRYFDSMKQDYGIEP 525

Query: 76  SMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDA-----------RSRYKL 135
           +MDHYG+VVDL+GRA R+K+  D  Q MPI  GITV GA L A            +  KL
Sbjct: 526 TMDHYGSVVDLLGRAGRLKQAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEMAANKL 585

Query: 136 FELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKKTPGCSSVELRNDVHFLY 195
           FELNP+EGGY+VLLA+IYA+AS  +++AEV+K  I++K+ L+KTPGCS VELRN+VH  Y
Sbjct: 586 FELNPQEGGYHVLLANIYATASMWSEVAEVRK--IMEKEGLQKTPGCSLVELRNEVHSFY 645

Query: 196 SASTTHPQFKRTYAL--NLGNEIKTASYVPDTNLINNVEGDVQEQLLNSHSKQLAVAFGH 241
           S ST HPQ KR YA    L +EIK A YVPDT+ I++VE DV+EQLLNSHS++LA+AFG 
Sbjct: 646 SGSTDHPQSKRIYAFLETLVDEIKAAGYVPDTHSIHDVEDDVKEQLLNSHSERLAIAFGL 705

[Close]

BLAST of Cucsa.166210 vs. TrEMBL
Match: M5X677_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001444mg PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 8.3e-56
Identity = 134/264 (50.76%), Postives = 171/264 (64.77%), Query Frame = 1


Query: 11  VREWN------GTPRLEKTLPYFFENMKKKGRVESNYITFLSVISACRTL---------- 70
           V  WN      GT  L K     F  M+K G ++ N ITFL VISAC             
Sbjct: 522 VTTWNAMIDGYGTNGLGKAAVDLFNEMEK-GTIKPNDITFLCVISACSHSGLVEEGLQYF 581

Query: 71  -----PFRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDA------ 130
                 + LE +MDHYGA+VDL+GRA ++ E  D  Q MP+  GITV GA L A      
Sbjct: 582 ASMKEDYGLEPAMDHYGAMVDLLGRAGQLSEAWDFIQKMPMEPGITVFGAMLGACRTHKN 641

Query: 131 -----RSRYKLFELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKKTPGCSS 190
                R+  K+FELNP EGGY+VLLA+IY++AS  +K+A+V+K  +++ + L+KTPGCS 
Sbjct: 642 VELGERAADKIFELNPVEGGYHVLLANIYSTASLWDKVAKVRK--MMEMKGLQKTPGCSL 701

Query: 191 VELRNDVHFLYSASTTHPQFKRTYAL--NLGNEIKTASYVPDTNLINNVEGDVQEQLLNS 241
           V+LRN+VH  YS ST+HPQ KR Y     LG+EIK A YVPDTN I++VE DV+EQLLNS
Sbjct: 702 VDLRNEVHTFYSGSTSHPQSKRIYTFLETLGDEIKAAGYVPDTNSIHDVEADVKEQLLNS 761

[Close]

BLAST of Cucsa.166210 vs. TrEMBL
Match: A0A067L904_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24583 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.0e-53
Identity = 128/253 (50.59%), Postives = 163/253 (64.43%), Query Frame = 1


Query: 16  GTPRLEKTLPYFFENMKKKGRVESNYITFLSVISACRTL---------------PFRLEA 75
           GT  L K     F  M++ G ++ N ITFL V+SAC                   + LE 
Sbjct: 521 GTHGLGKAAVELFREMER-GSIKPNDITFLCVLSACSHSGLVEEGLQYFASMKNDYGLEP 580

Query: 76  SMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDA-----------RSRYKL 135
           SMDHYGA+VDL+GRA R+ E  D  Q MP+   ITV GA L A           ++  KL
Sbjct: 581 SMDHYGAMVDLLGRAGRLNEAWDFIQKMPVEPEITVYGAMLGACKIHKNVELGEKAANKL 640

Query: 136 FELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKKTPGCSSVELRNDVHFLY 195
           FELNP+EGGY+VLLA+IYA+AS   KLAEV+   +++K+ L+KTPGCS VELRN++H  Y
Sbjct: 641 FELNPDEGGYHVLLANIYATASMWEKLAEVR--TMMRKKGLQKTPGCSLVELRNEIHSFY 700

Query: 196 SASTTHPQFKRTYAL--NLGNEIKTASYVPDTNLINNVEGDVQEQLLNSHSKQLAVAFGH 241
           S   +HPQ K  YA    L  +IK A YVPDT+ I++VE DV+EQLLN+HS++LA+AFG 
Sbjct: 701 SGGISHPQSKEIYAFLETLVGKIKAAGYVPDTSSIHDVEDDVKEQLLNTHSEKLAIAFGL 760

[Close]

BLAST of Cucsa.166210 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 203.4 bits (516), Expect = 1.7e-52
Identity = 122/274 (44.53%), Postives = 162/274 (59.12%), Query Frame = 1


Query: 1   MILGYAKNGRVREWN------GTPRLEKTLPYFFENMKKKGRVESNYITFLSVISACRTL 60
           +I        V  WN      GT    K     FE M+K G ++ N +TFLSVISAC   
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-GTIKPNGVTFLSVISACSHS 553

Query: 61  P---------------FRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGA 120
                           + +E SMDHYGA+VDL+GRA R+ E  D    MP+   + V GA
Sbjct: 554 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 613

Query: 121 TLDA-----------RSRYKLFELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQ 180
            L A           ++  +LFELNP++GGY+VLLA+IY +AS   K+ +V+ S +  +Q
Sbjct: 614 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSML--RQ 673

Query: 181 WLKKTPGCSSVELRNDVHFLYSASTTHPQFKRTYAL--NLGNEIKTASYVPDTNLINNVE 240
            L+KTPGCS VE++N+VH  +S ST HP  K+ YA    L   IK A YVPDTNL+  VE
Sbjct: 674 GLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVE 733

[Close]

BLAST of Cucsa.166210 vs. TAIR10
Match: AT3G57430.1 (AT3G57430.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 136.0 bits (341), Expect = 3.4e-32
Identity = 88/234 (37.61%), Postives = 127/234 (54.27%), Query Frame = 1


Query: 37  VESNYITFLSVISACRTL---------------PFRLEASMDHYGAVVDLIGRASRIKEV 96
           V+ N +TF+SV +AC                   + +E S DHY  VVDL+GRA RIKE 
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673

Query: 97  SDCTQNMPIGLGITVCGATLDARSRY------------KLFELNPEEGGYYVLLADIYAS 156
                 MP         ++L   SR              L +L P    +YVLLA+IY+S
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 733

Query: 157 ASKRNKLAEVKKSNIIKKQWLKKTPGCSSVELRNDVHFLYSASTTHPQFKRT--YALNLG 216
           A   +K  EV+++  +K+Q ++K PGCS +E  ++VH   +  ++HPQ ++   Y   L 
Sbjct: 734 AGLWDKATEVRRN--MKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLW 793

Query: 217 NEIKTASYVPDTN-LINNVEGDVQEQLLNSHSKQLAVAFGHLNTSPGTTILVRK 241
             ++   YVPDT+ +++NVE D +E LL  HS++LA+AFG LNTSPGT I V K
Sbjct: 794 ERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAK 845

[Close]

BLAST of Cucsa.166210 vs. TAIR10
Match: AT2G01510.1 (AT2G01510.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 3.3e-27
Identity = 89/271 (32.84%), Postives = 137/271 (50.55%), Query Frame = 1


Query: 1   MILGYAKNGRVREWNGTPRLEKTLPYFFENMKKKGRVESNYITFLSVISAC--------- 60
           MI+GYA NG  RE         TL   F  M+ +G +  NY+TFL V+SAC         
Sbjct: 282 MIVGYAMNGDSRE-------ALTL---FTTMQNEG-LRPNYVTFLGVLSACSHAGLVNEG 341

Query: 61  --------RTLPFRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDA 120
                   ++    LE   +HY  +VDL+GR+  ++E  +  + MP+     + GA L A
Sbjct: 342 KRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGA 401

Query: 121 RSRYK-----------LFELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKK 180
            + ++           L E  P+ G Y+VLL++IYA+A K + + +V+    ++K   KK
Sbjct: 402 CAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSK--MRKLGTKK 461

Query: 181 TPGCSSVELRNDVHFLYSASTTHPQFKRTYAL--NLGNEIKTASYVPDT-NLINNVEGDV 240
               SSVE    +HF      +HPQ K  Y     +  +I+   YVPDT ++ ++VE + 
Sbjct: 462 VAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEE 521

[Close]

BLAST of Cucsa.166210 vs. TAIR10
Match: AT5G66520.1 (AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 118.6 bits (296), Expect = 5.6e-27
Identity = 81/270 (30.00%), Postives = 137/270 (50.74%), Query Frame = 1


Query: 1   MILGYAKNGRVREWNGTPRLEKTLPYFFENMKKKGRVESNYITFLSVISACRTL------ 60
           +I GYA +G  RE      + K     F  M+K G ++ N ITF +V++AC         
Sbjct: 319 LISGYAYHGHGRE-----AISK-----FMEMQKMG-IKPNVITFTAVLTACSYTGLVEEG 378

Query: 61  ---------PFRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDARS 120
                     + L+ +++HYG +VDL+GRA  + E     Q MP+     + GA L A  
Sbjct: 379 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 438

Query: 121 RYKLFEL-----------NPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKKTP 180
            +K  EL           +P  GG YV  A+I+A   K +K AE ++  ++K+Q + K P
Sbjct: 439 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRR--LMKEQGVAKVP 498

Query: 181 GCSSVELRNDVHFLYSASTTHPQFKRTYA--LNLGNEIKTASYVPDTN--LINNVEGDVQ 240
           GCS++ L    H   +   +HP+ ++  +    +  +++   YVP+    L++ V+ D +
Sbjct: 499 GCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDER 558

[Close]

BLAST of Cucsa.166210 vs. TAIR10
Match: AT4G33990.1 (AT4G33990.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 118.6 bits (296), Expect = 5.6e-27
Identity = 79/242 (32.64%), Postives = 131/242 (54.13%), Query Frame = 1


Query: 28  FENMKKKGRVESNYITFLSVISACR---------------TLPFRLEASMDHYGAVVDLI 87
           F+ M  +G V+ ++ITF++++SAC                   + +  S+ HYG +VD+ 
Sbjct: 540 FKEMLDEG-VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 599

Query: 88  GRASRIKEVSDCTQNMPIGLGITVCGATLDARSRY-----------KLFELNPEEGGYYV 147
           GRA +++      ++M +    ++ GA L A   +            LFE+ PE  GY+V
Sbjct: 600 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 659

Query: 148 LLADIYASASKRNKLAEVKKSNIIKKQWLKKTPGCSSVELRNDVHFLYSASTTHPQFKRT 207
           LL+++YASA K   + E++  +I   + L+KTPG SS+E+ N V   Y+ + THP ++  
Sbjct: 660 LLSNMYASAGKWEGVDEIR--SIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEM 719

Query: 208 Y--ALNLGNEIKTASYVPDTN-LINNVEGDVQEQLLNSHSKQLAVAFGHLNTSPGTTILV 241
           Y     L  ++K   YVPD   ++ +VE D +E +L SHS++LA+AF  + T   TTI +
Sbjct: 720 YRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRI 778

[Close]

BLAST of Cucsa.166210 vs. NCBI nr
Match: gi|700195267|gb|KGN50444.1| (hypothetical protein Csa_5G175680 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 1.7e-110
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 1


Query: 31  MKKKGRVESNYITFLSVISACRTLPFRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPI 90
           MKKKGRVESNYITFLSVISACRTLPFRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPI
Sbjct: 1   MKKKGRVESNYITFLSVISACRTLPFRLEASMDHYGAVVDLIGRASRIKEVSDCTQNMPI 60

Query: 91  GLGITVCGATLDARSRYKLFELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWL 150
           GLGITVCGATLDARSRYKLFELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWL
Sbjct: 61  GLGITVCGATLDARSRYKLFELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWL 120

Query: 151 KKTPGCSSVELRNDVHFLYSASTTHPQFKRTYALNLGNEIKTASYVPDTNLINNVEGDVQ 210
           KKTPGCSSVELRNDVHFLYSASTTHPQFKRTYALNLGNEIKTASYVPDTNLINNVEGDVQ
Sbjct: 121 KKTPGCSSVELRNDVHFLYSASTTHPQFKRTYALNLGNEIKTASYVPDTNLINNVEGDVQ 180

Query: 211 EQLLNSHSKQLAVAFGHLNTSPGT 235
           EQLLNSHSKQLAVAFGHLNTSPG+
Sbjct: 181 EQLLNSHSKQLAVAFGHLNTSPGS 204

[Close]

BLAST of Cucsa.166210 vs. NCBI nr
Match: gi|778704342|ref|XP_004147126.2| (PREDICTED: pentatricopeptide repeat-containing protein At1g11290 isoform X1 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 3.5e-63
Identity = 149/253 (58.89%), Postives = 173/253 (68.38%), Query Frame = 1


Query: 16  GTPRLEKTLPYFFENMKKKGRVESNYITFLSVISACR---------------TLPFRLEA 75
           GT  L +     F+ MKK G VE N IT+LSVISAC                   + LE 
Sbjct: 527 GTHGLGRAALDLFDKMKK-GAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEP 586

Query: 76  SMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDA-----------RSRYKL 135
           SMDHYGA+VDL+GRA RIKE  D  +NMPI  GITV GA L A           ++  KL
Sbjct: 587 SMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKL 646

Query: 136 FELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKKTPGCSSVELRNDVHFLY 195
           FELNP+EGGY+VLLA+IYAS SK +K+AEV+K+  ++K+ LKKTPGCS VELRN+VH  Y
Sbjct: 647 FELNPDEGGYHVLLANIYASTSKWSKVAEVRKT--MEKKGLKKTPGCSVVELRNEVHSFY 706

Query: 196 SASTTHPQFKRTYAL--NLGNEIKTASYVPDTNLINNVEGDVQEQLLNSHSKQLAVAFGH 241
           S STTHPQ KR YA    L  EIK A YVPDTNLI +VE DVQEQLLNSHS++LA+AFG 
Sbjct: 707 SGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGL 766

[Close]

BLAST of Cucsa.166210 vs. NCBI nr
Match: gi|778704346|ref|XP_011655522.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g11290 isoform X2 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 3.5e-63
Identity = 149/253 (58.89%), Postives = 173/253 (68.38%), Query Frame = 1


Query: 16  GTPRLEKTLPYFFENMKKKGRVESNYITFLSVISACR---------------TLPFRLEA 75
           GT  L +     F+ MKK G VE N IT+LSVISAC                   + LE 
Sbjct: 343 GTHGLGRAALDLFDKMKK-GAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEP 402

Query: 76  SMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDA-----------RSRYKL 135
           SMDHYGA+VDL+GRA RIKE  D  +NMPI  GITV GA L A           ++  KL
Sbjct: 403 SMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKL 462

Query: 136 FELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKKTPGCSSVELRNDVHFLY 195
           FELNP+EGGY+VLLA+IYAS SK +K+AEV+K+  ++K+ LKKTPGCS VELRN+VH  Y
Sbjct: 463 FELNPDEGGYHVLLANIYASTSKWSKVAEVRKT--MEKKGLKKTPGCSVVELRNEVHSFY 522

Query: 196 SASTTHPQFKRTYAL--NLGNEIKTASYVPDTNLINNVEGDVQEQLLNSHSKQLAVAFGH 241
           S STTHPQ KR YA    L  EIK A YVPDTNLI +VE DVQEQLLNSHS++LA+AFG 
Sbjct: 523 SGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGL 582

[Close]

BLAST of Cucsa.166210 vs. NCBI nr
Match: gi|659090279|ref|XP_008445930.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g11290 isoform X1 [Cucumis melo])

HSP 1 Score: 250.0 bits (637), Expect = 4.5e-63
Identity = 148/253 (58.50%), Postives = 172/253 (67.98%), Query Frame = 1


Query: 16  GTPRLEKTLPYFFENMKKKGRVESNYITFLSVISACR---------------TLPFRLEA 75
           GT  L +     F+ MKK G VE N IT+LSVISAC                   + LE 
Sbjct: 527 GTHGLGRAALDLFDKMKK-GTVEPNDITYLSVISACSHSGLVDEGLHHFKSMKQDYGLEP 586

Query: 76  SMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDA-----------RSRYKL 135
           SMDHYG +VDL+GRA RIKE  D  +NMPI  GITV GA L A           ++  KL
Sbjct: 587 SMDHYGTMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNVEFGEKAANKL 646

Query: 136 FELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKKTPGCSSVELRNDVHFLY 195
           FELNP+EGGY+VLLA+IYAS SK +K+AEV+K+  ++K+ LKKTPGCS VELRN+VH  Y
Sbjct: 647 FELNPDEGGYHVLLANIYASTSKWSKVAEVRKT--MEKKGLKKTPGCSLVELRNEVHSFY 706

Query: 196 SASTTHPQFKRTYAL--NLGNEIKTASYVPDTNLINNVEGDVQEQLLNSHSKQLAVAFGH 241
           S STTHPQ KR YA    LG EIK A YVPDTN I +VE DVQEQLLNSHS++LA+AFG 
Sbjct: 707 SGSTTHPQSKRIYAFLEELGYEIKAAGYVPDTNSILDVEDDVQEQLLNSHSEKLAIAFGL 766

[Close]

BLAST of Cucsa.166210 vs. NCBI nr
Match: gi|629100084|gb|KCW65849.1| (hypothetical protein EUGRSUZ_G03194 [Eucalyptus grandis])

HSP 1 Score: 229.2 bits (583), Expect = 8.3e-57
Identity = 134/253 (52.96%), Postives = 170/253 (67.19%), Query Frame = 1


Query: 16  GTPRLEKTLPYFFENMKKKGRVESNYITFLSVISAC---------------RTLPFRLEA 75
           GT  L ++    F+ M+K G V  N ITFL ++SAC                   + +E 
Sbjct: 466 GTHGLGRSAVQLFKAMQK-GTVRPNDITFLCILSACSHSGLVDEGLRYFDSMKQDYGIEP 525

Query: 76  SMDHYGAVVDLIGRASRIKEVSDCTQNMPIGLGITVCGATLDA-----------RSRYKL 135
           +MDHYG+VVDL+GRA R+K+  D  Q MPI  GITV GA L A            +  KL
Sbjct: 526 TMDHYGSVVDLLGRAGRLKQAWDFIQKMPIEPGITVFGAMLGACKIHKNVELGEMAANKL 585

Query: 136 FELNPEEGGYYVLLADIYASASKRNKLAEVKKSNIIKKQWLKKTPGCSSVELRNDVHFLY 195
           FELNP+EGGY+VLLA+IYA+AS  +++AEV+K  I++K+ L+KTPGCS VELRN+VH  Y
Sbjct: 586 FELNPQEGGYHVLLANIYATASMWSEVAEVRK--IMEKEGLQKTPGCSLVELRNEVHSFY 645

Query: 196 SASTTHPQFKRTYAL--NLGNEIKTASYVPDTNLINNVEGDVQEQLLNSHSKQLAVAFGH 241
           S ST HPQ KR YA    L +EIK A YVPDT+ I++VE DV+EQLLNSHS++LA+AFG 
Sbjct: 646 SGSTDHPQSKRIYAFLETLVDEIKAAGYVPDTHSIHDVEDDVKEQLLNSHSERLAIAFGL 705

The following BLAST results are available for this feature:

BLAST of Cucsa.166210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PPR32_ARATH	3.0e-51	44.53	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
PP285_ARATH	6.0e-31	37.61	Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop...	[more]
PP140_ARATH	5.8e-26	32.84	Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidop...	[more]
PP449_ARATH	9.9e-26	30.00	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN...	[more]
PP348_ARATH	9.9e-26	32.64	Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN...	[more]

BLAST of Cucsa.166210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNI3_CUCSA	1.2e-110	99.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175680 PE=4 SV=1	[more]
A0A0A0KPP6_CUCSA	2.4e-63	58.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G583260 PE=4 SV=1	[more]
A0A059BIH8_EUCGR	5.8e-57	52.96	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03194 PE=4 SV=1	[more]
M5X677_PRUPE	8.3e-56	50.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001444mg PE=4 SV=1	[more]
A0A067L904_JATCU	1.0e-53	50.59	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24583 PE=4 SV=1	[more]

BLAST of Cucsa.166210 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11290.1	1.7e-52	44.53	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G57430.1	3.4e-32	37.61	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G01510.1	3.3e-27	32.84	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G66520.1	5.6e-27	30.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G33990.1	5.6e-27	32.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Cucsa.166210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700195267\|gb\|KGN50444.1\|	1.7e-110	99.51	hypothetical protein Csa_5G175680 [Cucumis sativus]	[more]
gi\|778704342\|ref\|XP_004147126.2\|	3.5e-63	58.89	PREDICTED: pentatricopeptide repeat-containing protein At1g11290 isoform X1 [Cuc...	[more]
gi\|778704346\|ref\|XP_011655522.1\|	3.5e-63	58.89	PREDICTED: pentatricopeptide repeat-containing protein At1g11290 isoform X2 [Cuc...	[more]
gi\|659090279\|ref\|XP_008445930.1\|	4.5e-63	58.50	PREDICTED: pentatricopeptide repeat-containing protein At1g11290 isoform X1 [Cuc...	[more]
gi\|629100084\|gb\|KCW65849.1\|	8.3e-57	52.96	hypothetical protein EUGRSUZ_G03194 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.166210.1	Cucsa.166210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..159 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.166210	Csa5G175680	Cucumber (Chinese Long) v2	cgycuB251

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.166210	Melon (DHL92) v3.6.1	cgymedB285
Cucsa.166210	Silver-seed gourd	carcgyB0963
Cucsa.166210	Cucumber (Chinese Long) v3	cgycucB264
Cucsa.166210	Watermelon (97103) v2	cgywmbB290
Cucsa.166210	Wax gourd	cgywgoB340
Cucsa.166210	Wax gourd	cgywgoB338
Cucsa.166210	Cucurbita maxima (Rimu)	cgycmaB0471
Cucsa.166210	Cucurbita maxima (Rimu)	cgycmaB0472
Cucsa.166210	Cucurbita moschata (Rifu)	cgycmoB0474
Cucsa.166210	Cucurbita moschata (Rifu)	cgycmoB0475
Cucsa.166210	Wild cucumber (PI 183967)	cgycpiB258
Cucsa.166210	Melon (DHL92) v3.5.1	cgymeB290
Cucsa.166210	Watermelon (Charleston Gray)	cgywcgB290
Cucsa.166210	Watermelon (97103) v1	cgywmB310
Cucsa.166210	Cucurbita pepo (Zucchini)	cgycpeB0458
Cucsa.166210	Bottle gourd (USVL1VR-Ls)	cgylsiB276