Cucsa.166200 (gene) Cucumber (Gy14) v1

NameCucsa.166200
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionMitochondrial transcription termination factor family protein, putative
Locationscaffold01153 : 1461754 .. 1463787 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAAATTTTCCTCCACTTTTCTTCTACATTTCTTCCAAAAACGTTCTCTCAATACCATTTCTACTTCTACATTGCCTTTGCCCTCTGTTTCTACCCTCGAATTCCTCAAAAATTCATGTCGCCTTTCTTCAGAATCTCCTTCTTTCGTCGCCGGTCGAAAGTTCCAATTCGATGAAAAAAaCATCCAGCAGTACGAAGCCATTATCGGTTTCTTGAAATCGCATGGATTCGAGGATTCAGAGATCGCCAAGTTGGTCTCCAAGCGACCTTTCATCCTTCAATCCAGAGTATCCAACAATCTGAAGCCTAAATTCGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTTTTAAGCTATTCCTATCAAACCCTTGGATTCTTTACAGGAACTTAGATTCTCAGTTAAAACCATTGTTTTTTTtCCTAAAGGAAATGCTTGGATCGGATGAACAAGTAATTAGTGCTATTCGTCGTTCTCCCTGGCTTCTAACTTCTGATTTTAAGGGTATTTTAAAATCTAACATTGATGTTTTAGCCAGTGAAGGAGTACCTTCTAGCAATATAGCAAAACTGATTGCATATAATTCTAGAACTATAATGCATACGGTTGATAGAATGATTCAAGTAGTGAAAATGGTTAAAGAATTGGGCATTGAACCAAAGTCTGCTAGGTTTCTTCATGCTCTTAGAGTAAGGTGTGCAATGAGTGATTCAACCTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAATGAGATACTTACACTATTTAAGAGACAGCCAATTTGTTTAGCTCGTTCAGAGGAGGCATTTAGGGATGTTGCAGATTTCTGTTTCAACACTGCGAAGTTGGATCCAGAAACTGTAATTTCTTACCCTAAGTTCTTCACGTATTCAGTCGACAAGCTCTGGCCAAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGGACAGAAAGGTTGCTCGGGCGCTAACACTAGTGGAGAGACAATTTGTGGAGACTTATGTTCTAAAGCATTTGGATGAAATACCAAAGCTAATGGACATATACCGGGGCAATGTCACAGCCGAAACCAGTTCTGTTCTATAGGATTGGAAAGCTGTAAGTTAACAGTCTTCTCTTCTTATAGTTTAAATTTCAGCATCATTATCTTCAAATGGAGGACCATTTTTGTTGTTATTGAGCCTACTGTTTCAGAACACTGCTTTTTCAGATTTTCAAGATCTCTCTCTCTTTCAAAGTGGGAGAGTTCTGTTGTTTTCCTTTTCAATTTTAAGGCTCTTAGCTAAATCTATTGTTGTATATTTCTTAATGTTGCTAAGTATGTAGCCTAACTCTAGTTCCAATGACCTCGAAATGAGCGGCCTTTTGTTTTtCCCTTCCTAATCTTTCGGACAAGTATCGTAGTACCGGGACTAGTATTTAAATGACCAAAAGCAACGGCAAGCTGTTTACTATGGCTATTGAGGAGCTGTTCTTGCACATCGCCTTCTACATTGTTAATCAAGTTAGTGTCGGGCACATAGCTAGCTGTCTTGATTTCATTTCCCAAGTTTAAGGCATATGTTCTCTTGAATTGTGGATGAGTTGTGCTTGCTGAATAGAGAAAATGAACATCATTTCTCAACTCCACCGAGCTACAACCGGGAGTTTTCTTAAGCCACTGCTTCTTTATTATATTGCTTTTTTTtACTTCAGCTAACTTATTCCGTTTTGAAGCAGAAGCATAAATATCCGCAAGCAAGACATAGTAGCCACCTTCCTCCGGGTTCAACTCAAATAGTTTGTAGCGGCTCCCTCCCAATTCAACATTTTTGTGAATTTACTAGCATCCAACGTAGCACCACATACAGTAATCCCTAGACCAATAGGCATGTTTTGAGTACAATCCGAGACTTCTTTGATCCTGCTAGCTCGACCGATAAGGTCAACCACAGCACCGTAGTGATCCATTGAAGCCTCCAATCTAAATGGCAGAGTCCGGCAAGCAGAGATGACAGA

mRNA sequence

ATGTTCAAATTTTCCTCCACTTTTCTTCTACATTTCTTCCAAAAACGTTCTCTCAATACCATTTCTACTTCTACATTGCCTTTGCCCTCTGTTTCTACCCTCGAATTCCTCAAAAATTCATGTCGCCTTTCTTCAGAATCTCCTTCTTTCGTCGCCGGTCGAAAGTTCCAATTCGATGAAAAAAACATCCAGCAGTACGAAGCCATTATCGGTTTCTTGAAATCGCATGGATTCGAGGATTCAGAGATCGCCAAGTTGGTCTCCAAGCGACCTTTCATCCTTCAATCCAGAGTATCCAACAATCTGAAGCCTAAATTCGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTTTTAAGCTATTCCTATCAAACCCTTGGATTCTTTACAGGAACTTAGATTCTCAGTTAAAACCATTGTTTTTTTTCCTAAAGGAAATGCTTGGATCGGATGAACAAGTAATTAGTGCTATTCGTCGTTCTCCCTGGCTTCTAACTTCTGATTTTAAGGGTATTTTAAAATCTAACATTGATGTTTTAGCCAGTGAAGGAGTACCTTCTAGCAATATAGCAAAACTGATTGCATATAATTCTAGAACTATAATGCATACGGTTGATAGAATGATTCAAGTAGTGAAAATGGTTAAAGAATTGGGCATTGAACCAAAGTCTGCTAGGTTTCTTCATGCTCTTAGAGTAAGGTGTGCAATGAGTGATTCAACCTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAATGAGATACTTACACTATTTAAGAGACAGCCAATTTGTTTAGCTCGTTCAGAGGAGGCATTTAGGGATGTTGCAGATTTCTGTTTCAACACTGCGAAGTTGGATCCAGAAACTGTAATTTCTTACCCTAAGTTCTTCACGTATTCAGTCGACAAGCTCTGGCCAAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGGACAGAAAGGTTGCTCGGGCGCTAACACTAGTGGAGAGACAATTTGTGGAGACTTATGTTCTAAAGCATTTGGATGAAATACCAAAGCTAATGGACATATACCGGGGCAATGTCACAGCCGAAACCAGTTCTGTTCTATAGGATTGGAAAGCTAAGCATAAATATCCGCAAGCAAGACATAGTAGCCACCTTCCTCCGGGTTCAACTCAAATAGTTTGTAGCGGCTCCCTCCCAATTCAACATTTTTGTGAATTTACTAGCATCCAACGTAGCACCACATACAGTAATCCCTAGACCAATAGGCATGTTTTGAGTACAATCCGAGACTTCTTTGATCCTGCTAGCTCGACCGATAAGGTCAACCACAGCACCGTAGTGATCCATTGAAGCCTCCAATCTAAATGGCAGAGTCCGGCAAGCAGAGATGACAGA

Coding sequence (CDS)

ATGTTCAAATTTTCCTCCACTTTTCTTCTACATTTCTTCCAAAAACGTTCTCTCAATACCATTTCTACTTCTACATTGCCTTTGCCCTCTGTTTCTACCCTCGAATTCCTCAAAAATTCATGTCGCCTTTCTTCAGAATCTCCTTCTTTCGTCGCCGGTCGAAAGTTCCAATTCGATGAAAAAAaCATCCAGCAGTACGAAGCCATTATCGGTTTCTTGAAATCGCATGGATTCGAGGATTCAGAGATCGCCAAGTTGGTCTCCAAGCGACCTTTCATCCTTCAATCCAGAGTATCCAACAATCTGAAGCCTAAATTCGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTTTTAAGCTATTCCTATCAAACCCTTGGATTCTTTACAGGAACTTAGATTCTCAGTTAAAACCATTGTTTTTTTtCCTAAAGGAAATGCTTGGATCGGATGAACAAGTAATTAGTGCTATTCGTCGTTCTCCCTGGCTTCTAACTTCTGATTTTAAGGGTATTTTAAAATCTAACATTGATGTTTTAGCCAGTGAAGGAGTACCTTCTAGCAATATAGCAAAACTGATTGCATATAATTCTAGAACTATAATGCATACGGTTGATAGAATGATTCAAGTAGTGAAAATGGTTAAAGAATTGGGCATTGAACCAAAGTCTGCTAGGTTTCTTCATGCTCTTAGAGTAAGGTGTGCAATGAGTGATTCAACCTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAATGAGATACTTACACTATTTAAGAGACAGCCAATTTGTTTAGCTCGTTCAGAGGAGGCATTTAGGGATGTTGCAGATTTCTGTTTCAACACTGCGAAGTTGGATCCAGAAACTGTAATTTCTTACCCTAAGTTCTTCACGTATTCAGTCGACAAGCTCTGGCCAAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGGACAGAAAGGTTGCTCGGGCGCTAACACTAGTGGAGAGACAATTTGTGGAGACTTATGTTCTAAAGCATTTGGATGAAATACCAAAGCTAATGGACATATACCGGGGCAATGTCACAGCCGAAACCAGTTCTGTTCTATAG

Protein sequence

MFKFSSTFLLHFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDEKNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLFKLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDVLASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSDSTWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYPKFFTYSVDKLWPRYKVLEVLKVKNLLKDRKVARALTLVERQFVETYVLKHLDEIPKLMDIYRGNVTAETSSVL*
BLAST of Cucsa.166200 vs. Swiss-Prot
Match: MTEF6_ARATH (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.6e-08
Identity = 36/145 (24.83%), Postives = 73/145 (50.34%), Query Frame = 1

Query: 69  IIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGF-VGPLLFKLFLSNP 128
           ++ F ++ G  ++++ K++   P ++   +   L     FL  +G     ++ K+ + NP
Sbjct: 117 LLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNP 176

Query: 129 WILYRNLDSQLKPLFFFLKEMLG-SDEQVISAIRRSPWLLTSDFKGILKSNIDVLASEGV 188
           +++  ++D +L+P   FLK  +G S++ + S +   P LL  D   ILK N D L   G 
Sbjct: 177 FLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGF 236

Query: 189 PSSNIAKLIAYNSRTIMHTVDRMIQ 212
             S IA ++    + ++ +V   +Q
Sbjct: 237 GDSQIATMVTGYPQILIKSVKNSLQ 261


HSP 2 Score: 44.3 bits (103), Expect = 3.4e-03
Identity = 32/114 (28.07%), Postives = 56/114 (49.12%), Query Frame = 1

Query: 72  FLKSH-GFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLFKLFLSNPWIL 131
           FLKS  G  +  I  +V   P +L   V+  LKP +++L+E GF    +  +    P IL
Sbjct: 193 FLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQIL 252

Query: 132 YRNLDSQLKPLFFFLKEMLGSDEQVISAI-----RRSPWLLTSDFKGILKSNID 180
            +++ + L+P   FL +++G     +++            + S FK + K+NID
Sbjct: 253 IKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNNID 306

BLAST of Cucsa.166200 vs. Swiss-Prot
Match: MTEF9_ARATH (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.3e-06
Identity = 34/148 (22.97%), Postives = 73/148 (49.32%), Query Frame = 1

Query: 62  NIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLFK 121
           N+   +  + +L S G +  +I +++ ++P ILQ  V NNLK    FL  +G     + +
Sbjct: 215 NVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQ 274

Query: 122 LFLSNPWILYRNLDSQLKPLFFFLKEMLGSDE-QVISAIRRSPWLLTSDFKGILKSNIDV 181
           +  + P +   ++++ L+P   +L E +G  E  V   ++ SP +L         +    
Sbjct: 275 IVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMF 334

Query: 182 LASE-GVPSSNIAKLIAYNSRTIMHTVD 208
           L+ E G P  ++ K++  + + + +++D
Sbjct: 335 LSKELGAPRDSVVKMVKKHPQLLHYSID 362


HSP 2 Score: 39.7 bits (91), Expect = 8.5e-02
Identity = 30/100 (30.00%), Postives = 52/100 (52.00%), Query Frame = 1

Query: 70  IGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFL-QEIGFVGPLLFKLFLSNPW 129
           I FL+S G  +S+I K+++    +L   + +NLKPK+ +L  E+     +L K     P 
Sbjct: 369 INFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKY----PM 428

Query: 130 ILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTS 169
            L  +LD +++P   FL E        +  +R+ P+ L+S
Sbjct: 429 YLSLSLDQRIRPRHRFLVE--------LKKVRKGPFPLSS 456

BLAST of Cucsa.166200 vs. Swiss-Prot
Match: MTEF4_ARATH (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.7e-06
Identity = 56/247 (22.67%), Postives = 101/247 (40.89%), Query Frame = 1

Query: 70  IGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLFKLFLSNPWI 129
           + +L   G    EI  ++++ P IL  RV+  +KP  E+L+ +G       +L    P I
Sbjct: 255 VAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHI 314

Query: 130 LYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDVLASEGVPSS 189
           L   LD  +KP    L++    +  + S I + P ++  D K  L +   +L S      
Sbjct: 315 LGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQRKLLCS------ 374

Query: 190 NIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSDSTWKKKINV 249
                I  N   +   ++RM Q V                       ++S+S   K I+ 
Sbjct: 375 ----AIHLNPEDLGSLIERMPQFV-----------------------SLSESPMLKHIDF 434

Query: 250 LKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYPKFFTYSVDK 309
           L   G+S ++   +    P  LA +    +   ++     K   + ++ +P FFTY ++ 
Sbjct: 435 LTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLES 468

Query: 310 -LWPRYK 316
            + PR+K
Sbjct: 495 TVKPRHK 468

BLAST of Cucsa.166200 vs. TrEMBL
Match: A0A067L028_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24592 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.3e-85
Identity = 177/372 (47.58%), Postives = 243/372 (65.32%), Query Frame = 1

Query: 9   LLHFFQKRSLNTISTSTL----PLPSVS-------TLEFLKNSCRLSSESPSFVAGRKFQ 68
           L    QKR LN  +T  L    PLP+ S       T++FL  SC L  +S   V+ R  Q
Sbjct: 9   LFFHIQKRFLNASATGKLSPRSPLPTTSNSSSSTFTVQFLVKSCGLPLKSARSVS-RTLQ 68

Query: 69  FDEKNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGP 128
            DEKN Q+Y++++  LKSH F  +++AKL+ K+P ILQ RV NNL PKF +L+E GF G 
Sbjct: 69  LDEKNQQRYQSVMELLKSHNFSGTQVAKLIVKKPAILQCRVENNLFPKFNYLKENGFAGE 128

Query: 129 LLFKLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSN 188
           LL +LFLSNP I+ R L+S +KP F FL+ +L SD++V++AIRRS WLLTSD KG ++ N
Sbjct: 129 LLPELFLSNPVIIQRALNSHIKPTFDFLRSVLDSDDKVVAAIRRSSWLLTSDLKGRMQPN 188

Query: 189 IDVLASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCA 248
           ID+L   GVP+ +I K++    R I    DRM+  V  V  LGI+P + RF+HA+RV  +
Sbjct: 189 IDLLVKVGVPAHSIEKIVILQPRVISQNHDRMVHAVHAVNNLGIQPTARRFVHAVRVMMS 248

Query: 249 MSDSTWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVI 308
           MSD TWKKK  +LK++GWSE EI + FK++P  LA SEE F++  DF  NT KL P+T+I
Sbjct: 249 MSDFTWKKKFELLKNVGWSEEEIFSAFKKKPHFLASSEEKFKNAMDFYLNTMKLQPQTLI 308

Query: 309 SYPKFFTYSVDK-LWPRYKVLEVLKVKNLLKDRKVARALTLV-ERQFVETYVLKHLDEIP 368
           + P F  +SVDK L PRY VL+ L+ K L++ RK    L L+ E+ F + +V K+  E+P
Sbjct: 309 ASPIFLMHSVDKRLRPRYNVLQALESKKLIEGRKKIEWLLLISEKNFQKNFVSKYAAEVP 368

BLAST of Cucsa.166200 vs. TrEMBL
Match: B9GLU5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07200g PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.2e-81
Identity = 166/369 (44.99%), Postives = 240/369 (65.04%), Query Frame = 1

Query: 9   LLHFFQKRSLNTISTSTLPLPSVST-------LEFLKNSCRLSSESPSFVAGRKFQFDEK 68
           LL   QKR L+T S+ST  L  +ST       ++FL NSC L S+S   V+ +K Q DEK
Sbjct: 10  LLPLLQKRFLSTSSSSTPTLSPLSTAPSSSFTVDFLINSCGLPSKSALSVS-QKLQLDEK 69

Query: 69  NIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLFK 128
           +IQ+ ++++ FLK+HGF+++ + KL+ KRP +L+  V  NLKPKFEFL   GFVG LL +
Sbjct: 70  SIQKPQSVLEFLKAHGFKETHVVKLIEKRPDVLRRGVDTNLKPKFEFLIANGFVGKLLPE 129

Query: 129 LFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDVL 188
           L  SNP +L R L+S +KP F + K +LGS++ +++A +R    LT D+K I++ N+++L
Sbjct: 130 LITSNPNVLERALESNMKPCFEYFKSILGSNDMIVAASKRCAVFLTYDWKSIIQPNVELL 189

Query: 189 ASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSDS 248
             EGVP   + K+I    R I    DRM+  V  VK LG+EPK+  F++ALR   +M++ 
Sbjct: 190 IKEGVPEERVVKMIVAQPRIIYQRRDRMVYAVNAVKNLGLEPKAPMFIYALRSILSMNEF 249

Query: 249 TWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYPK 308
           TWKKKI V+KS GW+E EIL  FK+ P  L+ SEE  R   DF  NT K++ + +I+ PK
Sbjct: 250 TWKKKIEVMKSFGWTEEEILRAFKQYPFQLSSSEEKMRKSMDFLLNTIKMERQAIIACPK 309

Query: 309 FFTYSVDK-LWPRYKVLEVLKVKNLLK-DRKVARALTLVERQFVETYVLKHLDEIPKLMD 368
           F  YS +K L PRY VL++LK K L++  +K    LT+ E+ F+E YV K+ D++P L++
Sbjct: 310 FLMYSTEKRLRPRYDVLKILKSKKLIEIGKKTNYLLTVSEKNFLENYVTKYADKVPGLLE 369

BLAST of Cucsa.166200 vs. TrEMBL
Match: M5XTI6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021790mg PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 4.1e-80
Identity = 164/359 (45.68%), Postives = 239/359 (66.57%), Query Frame = 1

Query: 9   LLHFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDEKNIQQYEA 68
           LL   QKR L T+ T T  L S  T+E+L  SC L  ES +  A +K Q D+K   + ++
Sbjct: 9   LLSLVQKRLLATLPTPTAALCSSFTVEYLVKSCGLPLES-AISASKKLQIDKKQTHRIDS 68

Query: 69  IIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLFKLFLSNPW 128
           ++ FLKS+GF+D++IAKL++KRP IL  +V +NL+PKF FL E GFVG  L +L L NP 
Sbjct: 69  MLKFLKSNGFDDAQIAKLITKRPTILHYKVLSNLEPKFNFLIENGFVGQNLPELVLLNPV 128

Query: 129 ILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDVLASEGVPS 188
           IL R+LDS +KP   FLK++L +++ +++A +RS WLL  D  G ++ N+ +L SEGVP 
Sbjct: 129 ILTRSLDSHIKPAVQFLKKLLSTND-MLAAAKRSSWLLNMDSVGTIQPNVALLQSEGVPL 188

Query: 189 SNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSDSTWKKKIN 248
             I K+I +  RT+M  VDRM   V+ +K+LGI+P    F+ A+RV  +M +STWK+KI 
Sbjct: 189 DVITKMILFQPRTVMQNVDRMAYAVRTIKDLGIDPTGPMFVRAVRVMISMKESTWKRKIE 248

Query: 249 VLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYPKFFTYSVD 308
             KS GWSE+ +L++FKRQP CLA SEE    V DF  NT KL+PET+I+ P    +  +
Sbjct: 249 FFKSYGWSEDVVLSVFKRQPFCLACSEEKLGRVMDFFLNTVKLEPETMIANPMLLMHGFE 308

Query: 309 K-LWPRYKVLEVLKVKNLLK--DRKVARALTLVERQFVETYVLKHLDEIPKLMDIYRGN 365
           K + PRY V ++L  K L+   ++++   +T  ER+F++ YVLK+L+E+P L++IY  +
Sbjct: 309 KTVLPRYNVFKILVSKELINRDNKRLCWLITQSERRFLDYYVLKYLNEVPDLLEIYHSS 365

BLAST of Cucsa.166200 vs. TrEMBL
Match: A0A061FRH9_THECC (Mitochondrial transcription termination factor family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_044644 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 3.5e-79
Identity = 149/314 (47.45%), Postives = 214/314 (68.15%), Query Frame = 1

Query: 54  RKFQFDEKNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIG 113
           ++ +  + N     +++  LKSHGFED++IAKLV KRP IL  +V   LKPK  +L + G
Sbjct: 58  KRLRIPQNNSPNSSSVLNCLKSHGFEDTQIAKLVRKRPDILNCKVQTKLKPKLRYLIQKG 117

Query: 114 FVGPLLFKLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGI 173
           F G LL  L LSNP++L+R LDSQ++P F FL+  L +DE++  A++R+ WLLT     +
Sbjct: 118 FTGKLLPDLILSNPFLLFRGLDSQIRPSFEFLRPFL-NDEEMFVALKRASWLLTISLNSV 177

Query: 174 LKSNIDVLASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALR 233
           L+ N+D+L SEGVP+S I+KL+    R ++ + DRM+  VK +KE+GIEPK  RF+HALR
Sbjct: 178 LQPNVDLLISEGVPASRISKLLILQPRVLLQSHDRMVYAVKTIKEIGIEPKETRFIHALR 237

Query: 234 VRCAMSDSTWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDP 293
           V C+MS S WKKK+ V  SLGWS+ E+L  FK+ P+CLA SE   R + DF  NT KLD 
Sbjct: 238 VICSMSKSNWKKKVEVFMSLGWSKEEVLNTFKKDPLCLACSENKLRYLMDFYVNTMKLDA 297

Query: 294 ETVISYPKFFTYSVD-KLWPRYKVLEVLKVKNLLK-DRKVARALTLVERQFVETYVLKHL 353
             +I+YPK   YSV+ ++  RY VL+ L+   L+K D+K+   + L E++F+E Y+ KH+
Sbjct: 298 RAIIAYPKLLGYSVERRVHARYIVLKALESMKLIKDDKKIVWVIKLPEKKFLEEYIAKHI 357

Query: 354 DEIPKLMDIYRGNV 366
           D++P L+D+Y G V
Sbjct: 358 DKVPGLLDMYHGAV 370

BLAST of Cucsa.166200 vs. TrEMBL
Match: A0A061FQC6_THECC (Mitochondrial transcription termination factor family protein, putative OS=Theobroma cacao GN=TCM_044645 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 5.6e-77
Identity = 164/364 (45.05%), Postives = 228/364 (62.64%), Query Frame = 1

Query: 6   STFLLHFFQKRSLNT--ISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDEKNI 65
           ST LL   QKR L T  I +S    P + +             +PS    ++ Q  + N 
Sbjct: 39  STNLLSLIQKRFLQTQAIPSSASEPPPLGS-------------APSL--SKRLQILQTNS 98

Query: 66  QQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLFKLF 125
               +++  LKSHGFED++IAKLV KRP IL  +V   L PK  +L E GF G LL  L 
Sbjct: 99  PNSSSVLNCLKSHGFEDTQIAKLVGKRPDILNCKVHTKLVPKLRYLIEKGFTGKLLPDLI 158

Query: 126 LSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDVLAS 185
           LSNP IL+R LDS +KP F FL+  L  +E ++ AI+RS WLLT     IL+ N+D+L  
Sbjct: 159 LSNPLILFRGLDSHIKPSFEFLRPFLNGEEMLV-AIKRSSWLLTISRNAILQPNVDLLIR 218

Query: 186 EGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSDSTW 245
            G+P+S I+KL+    R I  + DRM+  +K VK++G+EPK  RF+HALRV C+MS+S W
Sbjct: 219 AGIPASRISKLLILQPRVISQSNDRMVYAIKTVKQIGLEPKVPRFIHALRVICSMSESNW 278

Query: 246 KKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYPKFF 305
           KKK+ V  SLGWS+ E+L  FK+ P CLA SE   R + DF  NT K D +T+I+Y K  
Sbjct: 279 KKKVEVFMSLGWSKEEVLNTFKKDPPCLACSENKLRCLMDFYVNTMKSDVKTIIAYSKLL 338

Query: 306 TYSVDK-LWPRYKVLEVLKVKNLLKD-RKVARALTLVERQFVETYVLKHLDEIPKLMDIY 365
            YSV+K +  RY VL+VL+   L+K+ +K+  A+ L E++F+E Y+ KH+D++P+L+D+Y
Sbjct: 339 HYSVEKRVHARYIVLKVLESMKLIKEYKKIVWAIVLSEKKFLEAYITKHIDKVPELLDMY 386

BLAST of Cucsa.166200 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 186.8 bits (473), Expect = 2.4e-47
Identity = 110/334 (32.93%), Postives = 178/334 (53.29%), Query Frame = 1

Query: 33  TLEFLKNSCRLSSESPSFVAGRKFQFDEKNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPF 92
           TL +L +SC LS +S + VA RK   D    ++   ++  L+ HGF  ++I+ LV KRP 
Sbjct: 71  TLNYLIDSCGLSPDSAT-VASRKLLLDSP--ERPNTVLNLLRDHGFTTAQISSLVKKRPV 130

Query: 93  ILQSRVSNNLKPKFEFLQEIGFVGPLLFKLFLSNPWILYRNLDSQLKPLFFFLKEMLGSD 152
           +L +   + L PK  F   IG    LL +   S+P IL R+L +QL P + FLK +L SD
Sbjct: 131 LLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSD 190

Query: 153 EQVISAIRRSPWLLTSDFKGILKSNIDVLASEGVPSSNIAKLIAYNSRTIMHTVDRMIQV 212
           E++++A+RR+ W+   D    L  NI+ +A  GVP   I  L+ +    +M        +
Sbjct: 191 EKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAI 250

Query: 213 VKMVKELGIEPKSARFLHALRVRCAMSD-STWKKKINVLKSLGWSENEILTLFKRQPICL 272
            K  +E+G  P+ + F+ A+       + S W K   V +  GWSE++I+  FK+ P C+
Sbjct: 251 AKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCM 310

Query: 273 ARSEEAFRDVADFCFNTAKLDPETVISYPKFFTYSVDK-LWPRYKVLEVLKVKNLLK-DR 332
             SE       ++  N   + P ++   P    +S++K + PR  V +VL    L+K D 
Sbjct: 311 MLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDW 370

Query: 333 KVARALTLVERQFVETYVLKHLDEIPKLMDIYRG 364
            +   L  VE+ F+E  V+K+ +E+P+LM++Y G
Sbjct: 371 SLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

BLAST of Cucsa.166200 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 133.7 bits (335), Expect = 2.4e-31
Identity = 86/335 (25.67%), Postives = 160/335 (47.76%), Query Frame = 1

Query: 33  TLEFLKNSCRLSSESPSFVAGRKFQFDEKNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPF 92
           T+ +L +SC LS ES    +  +F     + ++ ++++   K HGF + +I  ++   P 
Sbjct: 58  TVSYLVDSCGLSLESAK--SNSRF-VKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPR 117

Query: 93  ILQSRVSNNLKPKFEFLQEIGFVGPLLFKLFLSNPWILYRNLDSQLKPLFFFLKEMLGSD 152
           +L     + + PK  F   IGF      K+  S+P +L  +L  +L P +  LK +L  +
Sbjct: 118 VLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEE 177

Query: 153 EQVISAIRRSPWLLTSDFKGILKSNIDVLASEGVPSSNIAKLIAYNSRTIMHTVDRMIQV 212
           E V+  ++R     +      +   + +    GVP  +I  L+  +  T      R  +V
Sbjct: 178 ESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEV 237

Query: 213 VKMVKELGIEPKSARFLHALRVRCAMSDSTWKKKINVLKSLGWSENEILTLFKRQPICLA 272
           +  V   G +PK A F+HA+      S+S  ++K  + +  GWS+ + +    R P C+ 
Sbjct: 238 LNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVT 297

Query: 273 RSEEAFRDVADFCFNTAKLDPETVISYPKFFTYSVDK-LWPRYKVLEVLKVKNLLK--DR 332
            S+E      ++  N   L    +++ P   + S++K + PR +V+ +L  K L+K  D 
Sbjct: 298 VSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDI 357

Query: 333 KVARALTLVERQFVETYVLKHLDEIPKLMDIYRGN 365
                L L   +F++ +VLK+ DE+P+L+  +  N
Sbjct: 358 NYFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

BLAST of Cucsa.166200 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 125.2 bits (313), Expect = 8.6e-29
Identity = 95/348 (27.30%), Postives = 173/348 (49.71%), Query Frame = 1

Query: 17  SLNTISTSTLP--LPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDEKNIQQYEAIIGFLK 76
           SL+  S++  P  + + + +EFL+++     + P  +A      + K+++Q  ++I  LK
Sbjct: 23  SLHHFSSNATPASISNPAFVEFLRDN---GFQKPLAIAIAMRYPNLKSLEQPRSVIQMLK 82

Query: 77  SHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLFKLFLSNPWILYRNL 136
           S+ F D++I K +   P ++   V   L+PK  F ++IGF G  L K    N  ++  +L
Sbjct: 83  SYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSL 142

Query: 137 DSQLKPLFFFLKEMLGSDEQVISAI-RRSPWLLTS-DFKGILKSNIDVLASEGVPSSNIA 196
             +L P    LK ++    + +  I  R  WLL S D    L  NI  L + G+  S +A
Sbjct: 143 VKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLA 202

Query: 197 KLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSDSTWKKKINVLKS 256
            L+    R    + +++   V    +LG    S   +HA+    ++S+ T+ +K+ +  +
Sbjct: 203 SLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMA 262

Query: 257 LGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYPKFFTYSVDK-LW 316
            G+SE+EI  + +R P  +  SE+      +F      L+ E +   P   +Y+++K + 
Sbjct: 263 NGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVI 322

Query: 317 PRYKVLEVLKVKNLL-----KDRKVARALTLVERQFVETYVLKHLDEI 355
           PR KVL++L+ K LL     K + +   + + E  F+E YV++  DEI
Sbjct: 323 PRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEI 367

BLAST of Cucsa.166200 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 110.2 bits (274), Expect = 2.9e-24
Identity = 97/397 (24.43%), Postives = 188/397 (47.36%), Query Frame = 1

Query: 11  HFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDEKNIQQYEAII 70
           +FF   S   +S       +  T+ +L +S  L+++    ++ RK  F++KN    ++++
Sbjct: 32  NFFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESIS-RKVSFEDKN--NPDSVL 91

Query: 71  GFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLFKLFLSNPWIL 130
             L SHGF  S+I+ ++   P +L +    +L PK +FLQ  G     + ++  S P IL
Sbjct: 92  NLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEIL 151

Query: 131 YRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKS---NIDVLASEGVP 190
            +     +   + F+K+ L      +    ++  L  S  +G L++   N+ VL   G+P
Sbjct: 152 GKKGHKTISVYYDFIKDTL------LEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMP 211

Query: 191 SSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSDSTWKKKI 250
              +  L+  +S+ +    ++  + +K V E+G +P +++F+ AL+V   M++ T ++K+
Sbjct: 212 HKLLFSLLISDSQPVCGK-EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKV 271

Query: 251 NVLKSLGWSENEILTLFKRQPICLARSEEAFRDVAD------------------------ 310
           ++ KSLG+   ++ + FK+ PI L  SE+   D  +                        
Sbjct: 272 HLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIG 331

Query: 311 FCFNTAKLDPETVI-----------SYPKFFTYSVDK-LWPRYKVLEVLKVKNLLKDR-- 365
               T K   E ++           S P  F YS++K + PR  V++ L  K L+++   
Sbjct: 332 LSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELP 391

BLAST of Cucsa.166200 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 103.2 bits (256), Expect = 3.5e-22
Identity = 70/265 (26.42%), Postives = 137/265 (51.70%), Query Frame = 1

Query: 12  FFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDEKNIQQYEAIIG 71
           F  K   +TI+  + P  S  T+ +L  S  L+ +    ++ +K  F++K     ++++ 
Sbjct: 33  FTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETIS-KKVTFEDK--VNPDSVLN 92

Query: 72  FLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLFKLFLSNPWILY 131
            L+S+GF+DS+I++++   P +L +    +L+PK +FL+  G     + ++  + P IL 
Sbjct: 93  LLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILD 152

Query: 132 RNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDVLASEGVPSSNI 191
           +  +  +   + F+K+++   + +  +            KG    NI VL   GVP   +
Sbjct: 153 KKGEESVSLYYDFVKDIMQDGKSLCISCPEGK-------KGNRIRNISVLRELGVPQKLL 212

Query: 192 AKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSDSTWKKKINVLK 251
             L+    + +    ++  + +K V ++G +P  ++F+ AL V   MS+ T ++K+NV K
Sbjct: 213 FSLLISRYQPVCGK-EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYK 272

Query: 252 SLGWSENEILTLFKRQPICLARSEE 277
            LG+SE EI  +FK+ P  L  SE+
Sbjct: 273 RLGFSEAEIWAIFKKWPYFLKFSEK 286


HSP 2 Score: 63.5 bits (153), Expect = 3.1e-10
Identity = 78/340 (22.94%), Postives = 142/340 (41.76%), Query Frame = 1

Query: 34  LEFLKNSCRLSSESPSFVAGRKFQFDEKNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFI 93
           L+FLK+    SSE    V+      D+K  +       F+K    +D +   L    P  
Sbjct: 124 LQFLKSRGASSSEVIEIVSNVPTILDKKGEESVSLYYDFVKDI-MQDGK--SLCISCP-- 183

Query: 94  LQSRVSNNLKPKFEFLQEIGFVGPLLFKLFLSN--PWILYRNLDSQLKPLFFFLKEMLGS 153
            + +  N ++     L+E+G    LLF L +S   P       +  LK +       +G 
Sbjct: 184 -EGKKGNRIR-NISVLRELGVPQKLLFSLLISRYQPVCGKEKFEESLKKVVD-----MGF 243

Query: 154 DEQVISAIRRSPWLLTSDFKGILKSNIDVLASEGVPSSNIAKLIAYNSRTIMHTVDRMIQ 213
           D      +     +     K I +  ++V    G   + I  +       +  +  ++I 
Sbjct: 244 DPAKSKFVEALHVVYEMSEKTI-EEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIIL 303

Query: 214 VVKMVKELGIEPKSARFLHALRVRCAMS-DSTWKKKINVLKSLGWSENEILTLFKRQPIC 273
           + + +K+ G+  +    +   R +C  S +      I +   LG+S ++   + KR P C
Sbjct: 304 MFETLKKCGLVEEEIISVLKSRPQCIRSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCC 363

Query: 274 LARSEEAFRDVADFCFNTAKLDPETVISYPKFFTYSVDK-LWPRYKVLEVLKVKNLL--K 333
            A S E  R   +          E V+  P    YS++K + PR  V++ L  K L+  +
Sbjct: 364 TAYSGETLRKKFEVLVKMMNWPLEAVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSE 423

Query: 334 DRKVARALTLVERQFVETYVLKHLDEIPKLMDIY-RGNVT 367
           +  ++  L   +++F++ YV+KH   +PKLM I+ RG V+
Sbjct: 424 NPPISSVLVCTDQEFLKRYVMKHDKLVPKLMAIFNRGRVS 450

BLAST of Cucsa.166200 vs. NCBI nr
Match: gi|778700689|ref|XP_011654901.1| (PREDICTED: uncharacterized protein LOC101206293 [Cucumis sativus])

HSP 1 Score: 733.4 bits (1892), Expect = 2.0e-208
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 1

Query: 1   MFKFSSTFLLHFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDE 60
           MFKFSSTFLLHFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDE
Sbjct: 1   MFKFSSTFLLHFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDE 60

Query: 61  KNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLF 120
           KNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLF
Sbjct: 61  KNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLF 120

Query: 121 KLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDV 180
           KLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDV
Sbjct: 121 KLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDV 180

Query: 181 LASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSD 240
           LASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSD
Sbjct: 181 LASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSD 240

Query: 241 STWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYP 300
           STWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYP
Sbjct: 241 STWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYP 300

Query: 301 KFFTYSVDKLWPRYKVLEVLKVKNLLKDRKVARALTLVERQFVETYVLKHLDEIPKLMDI 360
           KFFTYSVDKLWPRYKVLEVLKVKNLLKDRKVARALTLVERQFVETYVLKHLDEIPKLMDI
Sbjct: 301 KFFTYSVDKLWPRYKVLEVLKVKNLLKDRKVARALTLVERQFVETYVLKHLDEIPKLMDI 360

Query: 361 YRGNVTAETSSVL 374
           YRGNVTAETSSVL
Sbjct: 361 YRGNVTAETSSVL 373

BLAST of Cucsa.166200 vs. NCBI nr
Match: gi|659090428|ref|XP_008446011.1| (PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo])

HSP 1 Score: 549.7 bits (1415), Expect = 4.0e-153
Identity = 288/374 (77.01%), Postives = 315/374 (84.22%), Query Frame = 1

Query: 1   MFKFSSTFLLHFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDE 60
           MFKFSSTFLLHF QKR LNT+STSTLPL SVST+EFL NSC LSS SP+   GRK QFDE
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTS-NGRKLQFDE 60

Query: 61  KNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLF 120
           KNIQQYEA+IGFLKSHG E+ +IAKLVS++P+ILQS+VS NLKPKFEFLQEIGFVGPLL 
Sbjct: 61  KNIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIGFVGPLLS 120

Query: 121 KLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDV 180
           KL LSNP I YRNLDSQLKP FFFLKE+L SDEQV +AIR SPWLL SDFKGILKSNIDV
Sbjct: 121 KLILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGILKSNIDV 180

Query: 181 LASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSD 240
           LASEGVPS NIAKLI  NSRTIM  VDRMI+VVK VKELGIEPK+  F+HALR+RC++SD
Sbjct: 181 LASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSD 240

Query: 241 STWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYP 300
           STWKKKINV+KSLGWSE EI T FK+ P  L  SEE  RDVADFCFNTAKLDP +VI  P
Sbjct: 241 STWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICP 300

Query: 301 KFFTYSVDK-LWPRYKVLEVLKVKNLLKDRKVARALTLVERQFVETYVLKHLDEIPKLMD 360
           K F  SVDK L PRYKVLEVLKVKNLLK+  +A  L   ER FV+ +V++HLDEIP LMD
Sbjct: 301 KIFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMD 360

Query: 361 IYRGNVTAETSSVL 374
           IYRGNVTAET SVL
Sbjct: 361 IYRGNVTAETKSVL 373

BLAST of Cucsa.166200 vs. NCBI nr
Match: gi|659090283|ref|XP_008445932.1| (PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo])

HSP 1 Score: 511.1 bits (1315), Expect = 1.6e-141
Identity = 267/375 (71.20%), Postives = 308/375 (82.13%), Query Frame = 1

Query: 1   MFKFSSTFLLHFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDE 60
           M K SS+FLLHFF  R LNT+STSTLPLPSVST++FL NSC LSS SP+  AGRK QFDE
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTS-AGRKLQFDE 60

Query: 61  KNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLF 120
           K+IQQY A+I FLKSHGFE+++IA LVSKRP ILQS+VS NLKP+FEF QEIGF+GPLL 
Sbjct: 61  KHIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLP 120

Query: 121 KLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDV 180
           KL LS PW+L  +LDSQLKP FFFLK++L SDEQV +AI R P LL SD KG LKSNIDV
Sbjct: 121 KLILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGNLKSNIDV 180

Query: 181 LASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSD 240
           LASEGVPS NIAK+I  + RT+M  VDRMIQVVK VKELGIEPK+ +F+HA+R+R ++SD
Sbjct: 181 LASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSD 240

Query: 241 STWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYP 300
           STWKKKINV+KSLGWSENEILT FK+ P  L+ SEE  RDV DFC NTAKLDPETVISYP
Sbjct: 241 STWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYP 300

Query: 301 KFFTYSVDK-LWPRYKVLEVLKVKNLLKDR-KVARALTLVERQFVETYVLKHLDEIPKLM 360
             F  ++DK L PR+K+LE LKVK+LLK+  K+ RAL   ER+FVE YV+KHLD+IP LM
Sbjct: 301 TLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLM 360

Query: 361 DIYRGNVTAETSSVL 374
           DIYRGNV  ET SVL
Sbjct: 361 DIYRGNVATETKSVL 374

BLAST of Cucsa.166200 vs. NCBI nr
Match: gi|778708378|ref|XP_011656176.1| (PREDICTED: uncharacterized protein LOC105435654 [Cucumis sativus])

HSP 1 Score: 508.8 bits (1309), Expect = 7.9e-141
Identity = 269/374 (71.93%), Postives = 298/374 (79.68%), Query Frame = 1

Query: 1   MFKFSSTFLLHFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDE 60
           M K SSTFLLHF  KR L  IST TLPLPSVST++FL NSC LSS SP+  AGRK QFDE
Sbjct: 1   MSKISSTFLLHFIHKRFLTAISTPTLPLPSVSTIQFLTNSCALSSGSPTS-AGRKLQFDE 60

Query: 61  KNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLF 120
           KNIQQYEAIIGF KSHGFE+S+IA LVS+ P ILQSRVS NL PKFEFLQE+GFVGPLL 
Sbjct: 61  KNIQQYEAIIGFFKSHGFENSQIANLVSRHPSILQSRVSTNLNPKFEFLQEMGFVGPLLS 120

Query: 121 KLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDV 180
           KL LSNPW+L+R+LDS LKP F F K  L S EQV +AI RS WLLTSDFKGILKSNID+
Sbjct: 121 KLILSNPWLLFRSLDSHLKPSFSFWKNNLESVEQVTAAISRSSWLLTSDFKGILKSNIDL 180

Query: 181 LASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSD 240
           L SEGV S  IA LI    RTIM TVDRMIQ+VK VKELG EPK+  F+HALRVR +MSD
Sbjct: 181 LVSEGVSSRAIATLIVVQPRTIMRTVDRMIQLVKTVKELGFEPKARTFVHALRVRGSMSD 240

Query: 241 STWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYP 300
           S WKKKINVLKSLGWSE EI   FK+ P+ L  SE+  RDVADFCFNTAKLD  T+I+YP
Sbjct: 241 SIWKKKINVLKSLGWSEKEIFAAFKKFPLYLTCSEKKMRDVADFCFNTAKLDAGTLITYP 300

Query: 301 KFFTYSVDK-LWPRYKVLEVLKVKNLLKDRKVARALTLVERQFVETYVLKHLDEIPKLMD 360
             F  SVDK L P YKVLEVLKVKNLLK++K+AR     ER+FVE Y+++HLDEIP LMD
Sbjct: 301 VLFKLSVDKRLLPMYKVLEVLKVKNLLKNKKIARVFVQGEREFVEKYIVRHLDEIPYLMD 360

Query: 361 IYRGNVTAETSSVL 374
           IYRGNVTAET SV+
Sbjct: 361 IYRGNVTAETKSVV 373

BLAST of Cucsa.166200 vs. NCBI nr
Match: gi|778708378|ref|XP_011656176.1| (PREDICTED: uncharacterized protein LOC105435654 [Cucumis sativus])

HSP 1 Score: 494.6 bits (1272), Expect = 1.5e-136
Identity = 263/374 (70.32%), Postives = 298/374 (79.68%), Query Frame = 1

Query: 1   MFKFSSTFLLHFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDE 60
           M K SSTFLLHF  KR LNTISTSTLPLPSVST++FL NSC LSS S +  AGRK QFDE
Sbjct: 405 MSKISSTFLLHFIFKRLLNTISTSTLPLPSVSTIQFLTNSCALSSGSTTS-AGRKLQFDE 464

Query: 61  KNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLF 120
           KNIQQYEAIIGFLKSHGFE+ +IA LVS+RP ILQSRVS NL PKF FLQEIGFVGPLL 
Sbjct: 465 KNIQQYEAIIGFLKSHGFENPQIANLVSRRPSILQSRVSTNLNPKFGFLQEIGFVGPLLP 524

Query: 121 KLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDV 180
           KL LSNP +L+R+LDS LKP FFFLKE+L SDE+V +A+ R P LLT DFKG++KSN+D 
Sbjct: 525 KLILSNPTLLFRSLDSHLKPSFFFLKEILESDERVTTAVCRFPRLLTYDFKGVIKSNVDF 584

Query: 181 LASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSD 240
           L SEG+PS NIA +IA    TI+   DRMI+VVK VKELGIEPK   F++A+  R +MSD
Sbjct: 585 LVSEGMPSRNIANMIAMQPITILQKADRMIRVVKTVKELGIEPKGPMFVYAVLSRSSMSD 644

Query: 241 STWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYP 300
           STWK K+NV+KSLGWSENEILT FKR P  L  SEE  R+VADFCFNTAK DP TVI+YP
Sbjct: 645 STWKNKVNVMKSLGWSENEILTAFKRYPRYLTCSEEKMREVADFCFNTAKFDPGTVITYP 704

Query: 301 KFFTYSVDK-LWPRYKVLEVLKVKNLLKDRKVARALTLVERQFVETYVLKHLDEIPKLMD 360
            FF  SV+K L PRYKV+EVLKVKNLLK++K+A  L   ER FVE  V+KHLDEIP LMD
Sbjct: 705 MFFMCSVEKRLQPRYKVIEVLKVKNLLKNKKIAWLLLQGERNFVEKCVVKHLDEIPNLMD 764

Query: 361 IYRGNVTAETSSVL 374
           IYRG V AET  V+
Sbjct: 765 IYRGIVAAETKCVV 777


HSP 2 Score: 501.9 bits (1291), Expect = 9.6e-139
Identity = 266/372 (71.51%), Postives = 301/372 (80.91%), Query Frame = 1

Query: 1   MFKFSSTFLLHFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDE 60
           MFKFSSTFLLHF  KRSLNT+STSTLPLPSVST++FL NSC LSS SP+   GRK QFDE
Sbjct: 1   MFKFSSTFLLHFIHKRSLNTLSTSTLPLPSVSTIQFLTNSCGLSSGSPTS-HGRKLQFDE 60

Query: 61  KNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLF 120
           KNIQQYEAI+GF KSHGFE+S+IAKLVSK+P ILQS+VSNNLKPKFEFLQE GFVGPLL 
Sbjct: 61  KNIQQYEAIVGFFKSHGFENSQIAKLVSKQPSILQSKVSNNLKPKFEFLQENGFVGPLLP 120

Query: 121 KLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDV 180
           K+ L++P IL R+LDSQLKP F F+KEML  DE+V +AI R   LLT + KG  KS +DV
Sbjct: 121 KVILTSPAILLRSLDSQLKPSFRFMKEMLEPDEKVTTAICRYSRLLTCNIKGNFKSIVDV 180

Query: 181 LASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSD 240
           L SEGVPS NIAK+IAY   TIMH VDR I  VK VKELGIEP++  F++A+ VR +MSD
Sbjct: 181 LVSEGVPSKNIAKMIAYKPTTIMHKVDRTIHAVKTVKELGIEPEARMFVYAVLVRLSMSD 240

Query: 241 STWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYP 300
           STWKKKINV+KSLGWSE EI T FK+ P+ L  SEE  RDVADFCFNTAKLDP +VI YP
Sbjct: 241 STWKKKINVMKSLGWSEKEIFTAFKKYPLYLTCSEEKLRDVADFCFNTAKLDPGSVIIYP 300

Query: 301 KFFTYSV-DKLWPRYKVLEVLKVKNLLKDRKVARALTLVERQFVETYVLKHLDEIPKLMD 360
           KFF  SV ++L PRYKVLE LKVKNLLK +K+A  L   ER F+E YVLK+LDEIP LMD
Sbjct: 301 KFFKCSVNERLQPRYKVLEALKVKNLLKSKKIAWLLVEGERIFLENYVLKYLDEIPNLMD 360

Query: 361 IYRGNVTAETSS 372
           IYRGNV AET S
Sbjct: 361 IYRGNVVAETKS 371

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MTEF6_ARATH3.6e-0824.83Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
MTEF9_ARATH3.3e-0622.97Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana G... [more]
MTEF4_ARATH5.7e-0622.67Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana G... [more]
Match NameE-valueIdentityDescription
A0A067L028_JATCU3.3e-8547.58Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24592 PE=4 SV=1[more]
B9GLU5_POPTR2.2e-8144.99Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07200g PE=4 SV=1[more]
M5XTI6_PRUPE4.1e-8045.68Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021790mg PE=4 SV=1[more]
A0A061FRH9_THECC3.5e-7947.45Mitochondrial transcription termination factor family protein, putative isoform ... [more]
A0A061FQC6_THECC5.6e-7745.05Mitochondrial transcription termination factor family protein, putative OS=Theob... [more]
Match NameE-valueIdentityDescription
AT5G07900.12.4e-4732.93 Mitochondrial transcription termination factor family protein[more]
AT1G21150.12.4e-3125.67 Mitochondrial transcription termination factor family protein[more]
AT5G64950.18.6e-2927.30 Mitochondrial transcription termination factor family protein[more]
AT1G61970.12.9e-2424.43 Mitochondrial transcription termination factor family protein[more]
AT3G46950.13.5e-2226.42 Mitochondrial transcription termination factor family protein[more]
Match NameE-valueIdentityDescription
gi|778700689|ref|XP_011654901.1|2.0e-208100.00PREDICTED: uncharacterized protein LOC101206293 [Cucumis sativus][more]
gi|659090428|ref|XP_008446011.1|4.0e-15377.01PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo][more]
gi|659090283|ref|XP_008445932.1|1.6e-14171.20PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo][more]
gi|778708378|ref|XP_011656176.1|7.9e-14171.93PREDICTED: uncharacterized protein LOC105435654 [Cucumis sativus][more]
gi|778708378|ref|XP_011656176.1|1.5e-13670.32PREDICTED: uncharacterized protein LOC105435654 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.166200.1Cucsa.166200.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 238..336
score: 3.5E-14coord: 71..268
score: 4.2
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 156..187
score: 14.0coord: 226..256
score: 15.0coord: 84..115
score: 1.4E-5coord: 192..222
score: 77.0coord: 120..151
score: 0.14coord: 293..323
score:
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 9..368
score: 2.2E
NoneNo IPR availablePANTHERPTHR13068:SF20SUBFAMILY NOT NAMEDcoord: 9..368
score: 2.2E

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.166200CSPI05G08600Wild cucumber (PI 183967)cgycpiB258
Cucsa.166200MELO3C011753.2Melon (DHL92) v3.6.1cgymedB285
Cucsa.166200CsaV3_5G006050Cucumber (Chinese Long) v3cgycucB264
The following gene(s) are paralogous to this gene:

None