Cucsa.158100 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGATGCTGTGCTCAAATACAAAGCCAATGTGTTTGCATTATTTTCAAAGAGAAAGCAGTTTGAAGAAGCAGAAAGTTAAGAACTGGAAGTGCTTTGCTATTGATCCCAGAAGTCAAAAAATCATTCATCATAATAACCTCTTATCTGTTTCTTTTGTATCTTTTAGTGACTTACCACTTTATGAATCTCCTGGGGTATATTTTGTTACATTCTATAGAATATAAATAAATAAATATTTTATTTTTTATTTGATTTGATATGATTTATATATATTTGGTAATTTGATCTCTGTATAGAAAGCTTCATTTGATGAATATTTGGAAGATAAACCCAGATTGGTCAAAGCAACATTTCCTGGAAAAAATCAACAGCTCAACCAGGTTAATTCATCCGCCACCTTTTTCTTTTTAGTTTAAGGGTGTTTTAATTAGTGATAATTAAAGAGTAATAATTAATGGGCAAACGTGTACTTGTTTTCGACTTTAAAATGAGTAGCATGTTTGAATTAATGTTGGATATTGATCAGGAAGAGTGGAGAATTGAAACACCAAAAATTCAACTATTGTTCCTCAAGATATGCCCAACCATTGATATGAAAATAATCTCCAAAACCAATGGAGGAGAAGCTTATCCATGTCATGTTCCTCATTACATCCCAAAACTTCTTCACTTTCAAATGGTAATCCTTACGATCACTTTCACGATGGAACCATATTATTTATTTCTATATTATCTATGCTTTGATTTGGTGGTTTTTTTGAGCAGACAAATTGGGAGATCAATGGTATCCATAAAGAGTATAGGCCATCTTCAGCCAATGTTTGTTCTCATGGAGTTATCTATAGACAAAAAATTGGAACAAGAAGCCGCCTTAAGTTTCAACTTGTAATCGATCTCAGCTTTCTTGTACCGGACGCGCTCCATTTCGTTCCAAATGACGTTTTACGGGGCATTATCGAGACGGTAAACACTCCATGGAAACTGTTGAGTTTTGTTTATCTATAGATATACATATAGAAGATTAATGATTGATTTATTATGTATTAAGTTTATGATAAAATTTTGGTAATTGAACAGGTTATGAAGGCAATGGTTGAGGACTTGAAGCATAAAACTGTACATAAATTGGTTGAGGATTATAGTAAGTTTAGGATGGAGAAAGAGAAAGAAAATATTGGAAAAGTAAACACATCAAAATGATGAAAAGATTGTTAATATTTTCATGTCCATGTGAGAGATAGATCGTCGGTTTCAATATATTGTAAAAGAATAAATGAAACATATATGATAAAAAATATTTACTTACATC ATGACGATGCTGTGCTCAAATACAAAGCCAATGTGTTTGCATTATTTTCAAAGAGAAAGCAGTTTGAAGAAGCAGAAAGTTAAGAACTGGAAGTGCTTTGCTATTGATCCCAGAAGTCAAAAAATCATTCATCATAATAACCTCTTATCTGTTTCTTTTGTATCTTTTAGTGACTTACCACTTTATGAATCTCCTGGGAAAGCTTCATTTGATGAATATTTGGAAGATAAACCCAGATTGGTCAAAGCAACATTTCCTGGAAAAAATCAACAGCTCAACCAGGTTAATTCATCCGCCACCTTTTTCTTTTTAGAAGAGTGGAGAATTGAAACACCAAAAATTCAACTATTGTTCCTCAAGATATGCCCAACCATTGATATGAAAATAATCTCCAAAACCAATGGAGGAGAAGCTTATCCATGTCATGTTCCTCATTACATCCCAAAACTTCTTCACTTTCAAATGACAAATTGGGAGATCAATGGTATCCATAAAGAGTATAGGCCATCTTCAGCCAATGTTTGTTCTCATGGAGTTATCTATAGACAAAAAATTGGAACAAGAAGCCGCCTTAAGTTTCAACTTGTAATCGATCTCAGCTTTCTTGTACCGGACGCGCTCCATTTCGTTCCAAATGACGTTTTACGGGGCATTATCGAGACGGTTATGAAGGCAATGGTTGAGGACTTGAAGCATAAAACTGTACATAAATTGGTTGAGGATTATAGTAAGTTTAGGATGGAGAAAGAGAAAGAAAATATTGGAAAAGTAAACACATCAAAATGATGAAAAGATTGTTAATATTTTCATGTCCATGTGAGAGATAGATCGTCGGTTTCAATATATTGTAAAAGAATAAATGAAACATATATGataaaaaatatttacttacatc ATGACGATGCTGTGCTCAAATACAAAGCCAATGTGTTTGCATTATTTTCAAAGAGAAAGCAGTTTGAAGAAGCAGAAAGTTAAGAACTGGAAGTGCTTTGCTATTGATCCCAGAAGTCAAAAAATCATTCATCATAATAACCTCTTATCTGTTTCTTTTGTATCTTTTAGTGACTTACCACTTTATGAATCTCCTGGGAAAGCTTCATTTGATGAATATTTGGAAGATAAACCCAGATTGGTCAAAGCAACATTTCCTGGAAAAAATCAACAGCTCAACCAGGTTAATTCATCCGCCACCTTTTTCTTTTTAGAAGAGTGGAGAATTGAAACACCAAAAATTCAACTATTGTTCCTCAAGATATGCCCAACCATTGATATGAAAATAATCTCCAAAACCAATGGAGGAGAAGCTTATCCATGTCATGTTCCTCATTACATCCCAAAACTTCTTCACTTTCAAATGACAAATTGGGAGATCAATGGTATCCATAAAGAGTATAGGCCATCTTCAGCCAATGTTTGTTCTCATGGAGTTATCTATAGACAAAAAATTGGAACAAGAAGCCGCCTTAAGTTTCAACTTGTAATCGATCTCAGCTTTCTTGTACCGGACGCGCTCCATTTCGTTCCAAATGACGTTTTACGGGGCATTATCGAGACGGTTATGAAGGCAATGGTTGAGGACTTGAAGCATAAAACTGTACATAAATTGGTTGAGGATTATAGTAAGTTTAGGATGGAGAAAGAGAAAGAAAATATTGGAAAAGTAAACACATCAAAATGA MTMLCSNTKPMCLHYFQRESSLKKQKVKNWKCFAIDPRSQKIIHHNNLLSVSFVSFSDLPLYESPGKASFDEYLEDKPRLVKATFPGKNQQLNQVNSSATFFFLEEWRIETPKIQLLFLKICPTIDMKIISKTNGGEAYPCHVPHYIPKLLHFQMTNWEINGIHKEYRPSSANVCSHGVIYRQKIGTRSRLKFQLVIDLSFLVPDALHFVPNDVLRGIIETVMKAMVEDLKHKTVHKLVEDYSKFRMEKEKENIGKVNTSK*
BLAST of Cucsa.158100 vs. TrEMBL
Match: A0A0A0KSD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G637730 PE=4 SV=1) HSP 1 Score: 511.1 bits (1315), Expect = 7.8e-142 Identity = 251/261 (96.17%), Postives = 251/261 (96.17%), Query Frame = 1
BLAST of Cucsa.158100 vs. TrEMBL
Match: A0A067GAW2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024974mg PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 3.6e-38 Identity = 95/258 (36.82%), Postives = 147/258 (56.98%), Query Frame = 1
BLAST of Cucsa.158100 vs. TrEMBL
Match: V4SZD3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012515mg PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.0e-37 Identity = 94/258 (36.43%), Postives = 146/258 (56.59%), Query Frame = 1
BLAST of Cucsa.158100 vs. TrEMBL
Match: A0A059AQL8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02016 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 6.8e-37 Identity = 87/198 (43.94%), Postives = 126/198 (63.64%), Query Frame = 1
BLAST of Cucsa.158100 vs. TrEMBL
Match: D7SXF7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0108g01180 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.6e-36 Identity = 90/219 (41.10%), Postives = 135/219 (61.64%), Query Frame = 1
BLAST of Cucsa.158100 vs. TAIR10
Match: AT5G39520.1 (AT5G39520.1 Protein of unknown function (DUF1997)) HSP 1 Score: 147.9 bits (372), Expect = 8.7e-36 Identity = 78/197 (39.59%), Postives = 118/197 (59.90%), Query Frame = 1
BLAST of Cucsa.158100 vs. TAIR10
Match: AT5G39530.1 (AT5G39530.1 Protein of unknown function (DUF1997)) HSP 1 Score: 140.6 bits (353), Expect = 1.4e-33 Identity = 76/196 (38.78%), Postives = 118/196 (60.20%), Query Frame = 1
BLAST of Cucsa.158100 vs. NCBI nr
Match: gi|449447645|ref|XP_004141578.1| (PREDICTED: uncharacterized protein LOC101212716 [Cucumis sativus]) HSP 1 Score: 511.1 bits (1315), Expect = 1.1e-141 Identity = 251/261 (96.17%), Postives = 251/261 (96.17%), Query Frame = 1
BLAST of Cucsa.158100 vs. NCBI nr
Match: gi|659119525|ref|XP_008459703.1| (PREDICTED: uncharacterized protein LOC103498744 [Cucumis melo]) HSP 1 Score: 419.1 bits (1076), Expect = 5.8e-114 Identity = 206/247 (83.40%), Postives = 224/247 (90.69%), Query Frame = 1
BLAST of Cucsa.158100 vs. NCBI nr
Match: gi|641853829|gb|KDO72647.1| (hypothetical protein CISIN_1g024974mg [Citrus sinensis]) HSP 1 Score: 166.8 bits (421), Expect = 5.1e-38 Identity = 95/258 (36.82%), Postives = 147/258 (56.98%), Query Frame = 1
BLAST of Cucsa.158100 vs. NCBI nr
Match: gi|697149481|ref|XP_009628951.1| (PREDICTED: uncharacterized protein LOC104119215 isoform X1 [Nicotiana tomentosiformis]) HSP 1 Score: 166.4 bits (420), Expect = 6.7e-38 Identity = 94/234 (40.17%), Postives = 139/234 (59.40%), Query Frame = 1
BLAST of Cucsa.158100 vs. NCBI nr
Match: gi|1000945167|ref|XP_002530009.2| (PREDICTED: uncharacterized protein LOC8283427, partial [Ricinus communis]) HSP 1 Score: 165.2 bits (417), Expect = 1.5e-37 Identity = 90/233 (38.63%), Postives = 145/233 (62.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |