Cucsa.156350 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.156350
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionZinc finger family protein, putative
Locationscaffold01139 : 673390 .. 675588 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCAGAAGGATCCACAGCAAGCGCTTCAGAATCGAAACCACTTGGAATTGCAAATGACGCGGACAGTTTTCTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGATGAAGAGGCTCTTCTATTCGCGAGCCTCGTGGTTGACGACACGCCGGAAAGAGAGTTTCAGCAGAAGAAACGATCTGTTCTCCAGCGCAAGAGTCCTGCATCTGGTTCAAGAAGGTATATATATATATATTGATTGTGTTTCTTCTCTTGTTTTTTATGTGAATCGTGGAGATATATGAGCGGATCCGAGAGTTTCTTGTTCCAATTGGGATCGATTTGTTGGAAAGTGGTGTTGATTTCTTGGTTTTTtGTTTTTAGGAAACGGAGGACTTTGACGAGCATAATTTCGATTCCGGTGGCTGTTCTTGACCTCGATGAGACAGAACCCACTGTGAAAGGTGTGAATTCTTCTCTCCAGTGCTCTGAGCATTTGGATTTCCTTTTAGCCCTAATTAATTCCTTTCCTTACCCGACAAATGTTTACAAATTTTGTTATGGATGGTTTCCTTTCTTGTCATTTCATTAAAGGTTCATGCATAGAAACATTTGAATTCACAATCAGACTCTAATAACAAAACGAGTATTTTAGGTCCTATTTGGTATTGATTTAGTCTATTTTGTTTTTTAGAAATTATACATGTTTTTTTAAGACTTCAGTGTAAGGATTTTCACCTGTTATTAACCACATATGTGAATTCTTAATCAAATTCTAGGTAACCATTTGATTTTTAATTTTTGAAACATTGACCTACAGTAATTCTCATAAAAAATCAAATTGTTACTACATAGAGTCCTAGCTTTCAAATTGCTCTTAAAAGTAGGTAACAAGAAAAGCAAGGGTTAAACAGTATTTATAAACTTAGTTTTCTTTTGATGAATGATGGATGGCTGGCTAGAGTTTCAGAATTGTGCCCATTTTCAAAATTTATGGAGTAGATATGAACAGAGTTGTTTCAAATGACATGAACAGATGATGGTCCAAAACAAGAGCCAAAATCTGCAGAAGCTGAAGCAAAGAAGAGTGATTCAATGGTTGAACAGAAAGCTGACGCTTCTTCTTTAACATCTTCAACTCTCCCATTGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTGTAAGGATATTCTCTCCACTTACAAGCTTGAGACATCTTTTTGTACACTTCTCTCTCATTCTTAACTGTCTCTTTTTtCCCCCTAATTCTTTTCACAGATTTGTTTGGAAATTTGCTTCGAACCTAGTACCACACCTTGTGGACACAGGTAAGCCCAAAACTGACTTCTTGTTCTTGCACGTTTTGGAATTTTGAGTTTGTTTTAATTCCTAAATTATGCAGCAAAATTATTTTAGTTGATTTTTCATTAATTATTACATAATTTCCATTTCTTGACCAGTCAATAGAAATTTAAAATGTCAATACACATAAAaTTGATATTTTTGTGACATATTCAATATTTTGATAAAATTCACACACATACTAAACTACTAGATACAAAaTTAAAAGTTTACCAGTTTATGGCTGATATTAACAAACATGTTAGTTTTCAACAATAGCGAAAATGTCAATAACCCAAAATGGAAACTTCAAGGACTTATTGACATTTTTAAAAGTTCATTGATCCATCCTGCAAACTTACACCAGTATGAAAATTTGGAGACTAAAGTTCTGAAGCTGAACTTTTGTTTTTCACTCTTTTTGTAGTTTCTGCAAGAAATGTCTAAGATCTGCAGCTGACAAATGTGGAAAAAGGTGCCCTAAATGCAGACAACTAATAAGGTTGAATTTGCAACTCCAAAAGTTCCATGAACCAAATCAGTTGGGATCATTTCATTTTCAAACATTTAGTGCTTATATCTCTCTTGTTGATCTTAAATGTGCAGCAATGGGAGATCTTGCACTGTCAATACAGTTCTTTGGAACACAATACAGCTTCTCTTTCCCAAAGAGGTTGAAGCAAGGAAGGAAGCAAGAGAGTGTAATAGCCGTGAAAAGAAGATTCAAGACCCAGAAAAGGCATTCTATAGTAGTCTGCAGAACTATGATACAAGACCAATTGGCACGTCGAGTAGGCATGCTAGTACAAGAAGAAGAGGGGAAATAACAGTTCAGGAGGAGAATGGTGAATGGGACAGCAGGGTGA

mRNA sequence

ATGGTGTCAGAAGGATCCACAGCAAGCGCTTCAGAATCGAAACCACTTGGAATTGCAAATGACGCGGACAGTTTTCTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGATGAAGAGGCTCTTCTATTCGCGAGCCTCGTGGTTGACGACACGCCGGAAAGAGAGTTTCAGCAGAAGAAACGATCTGTTCTCCAGCGCAAGAGTCCTGCATCTGGTTCAAGAAGGAAACGGAGGACTTTGACGAGCATAATTTCGATTCCGGTGGCTGTTCTTGACCTCGATGAGACAGAACCCACTGTGAAAGATGATGGTCCAAAACAAGAGCCAAAATCTGCAGAAGCTGAAGCAAAGAAGAGTGATTCAATGGTTGAACAGAAAGCTGACGCTTCTTCTTTAACATCTTCAACTCTCCCATTGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTATTTGTTTGGAAATTTGCTTCGAACCTAGTACCACACCTTGTGGACACAGTTTCTGCAAGAAATGTCTAAGATCTGCAGCTGACAAATGTGGAAAAAGGTGCCCTAAATGCAGACAACTAATAAGCAATGGGAGATCTTGCACTGTCAATACAGTTCTTTGGAACACAATACAGCTTCTCTTTCCCAAAGAGGTTGAAGCAAGGAAGGAAGCAAGAGAGTGGTGA

Coding sequence (CDS)

ATGGTGTCAGAAGGATCCACAGCAAGCGCTTCAGAATCGAAACCACTTGGAATTGCAAATGACGCGGACAGTTTTCTTAGCCCTAGATTCAAATCGGCGGCCGCCATGGCCGGCTGGGATGAAGAGGCTCTTCTATTCGCGAGCCTCGTGGTTGACGACACGCCGGAAAGAGAGTTTCAGCAGAAGAAACGATCTGTTCTCCAGCGCAAGAGTCCTGCATCTGGTTCAAGAAGGAAACGGAGGACTTTGACGAGCATAATTTCGATTCCGGTGGCTGTTCTTGACCTCGATGAGACAGAACCCACTGTGAAAGATGATGGTCCAAAACAAGAGCCAAAATCTGCAGAAGCTGAAGCAAAGAAGAGTGATTCAATGGTTGAACAGAAAGCTGACGCTTCTTCTTTAACATCTTCAACTCTCCCATTGGATAAGCTCAGAGAAGAGCTTTCTTGTGCTATTTGTTTGGAAATTTGCTTCGAACCTAGTACCACACCTTGTGGACACAGTTTCTGCAAGAAATGTCTAAGATCTGCAGCTGACAAATGTGGAAAAAGGTGCCCTAAATGCAGACAACTAATAAGCAATGGGAGATCTTGCACTGTCAATACAGTTCTTTGGAACACAATACAGCTTCTCTTTCCCAAAGAGGTTGAAGCAAGGAAGGAAGCAAGAGAGTGGTGA

Protein sequence

MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKKSDSMVEQKADASSLTSSTLPLDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEAREW*
Homology
[Close]
BLAST of Cucsa.156350 vs. Swiss-Prot
Match: RN168_BOVIN (E3 ubiquitin-protein ligase RNF168 OS=Bos taurus GN=RNF168 PE=2 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 7.2e-12
Identity = 37/84 (44.05%), Postives = 46/84 (54.76%), Query Frame = 1 

Query: 148 ELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLISNG---RSCT---V 207
           E  C IC+EI FEP T PC H+ CK C  S  +K    CP CR+ +S+    RS T   V
Sbjct: 13  ECQCQICVEILFEPVTLPCNHTLCKPCFESTVEKASLCCPFCRRRVSSWARYRSRTNSLV 72

Query: 208 NTVLWNTIQLLFPKEVEARKEARE 226
           N  LW  IQ  +PKE + R   +E
Sbjct: 73  NMELWEIIQKHYPKECKLRASGQE 96

[Close]
BLAST of Cucsa.156350 vs. Swiss-Prot
Match: RN168_HUMAN (E3 ubiquitin-protein ligase RNF168 OS=Homo sapiens GN=RNF168 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.4e-12
Identity = 36/94 (38.30%), Postives = 49/94 (52.13%), Query Frame = 1 

Query: 140 LPLDKLRE--ELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLISN-- 199
           LP D +    E  C IC+EI  EP T PC H+ CK C +S  +K    CP CR+ +S+  
Sbjct: 3   LPKDAIPSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWT 62

Query: 200 ----GRSCTVNTVLWNTIQLLFPKEVEARKEARE 226
                R+  VN  LW  IQ  +P+E + R   +E
Sbjct: 63  RYHTRRNSLVNVELWTIIQKHYPRECKLRASGQE 96

[Close]
BLAST of Cucsa.156350 vs. Swiss-Prot
Match: TRI65_HUMAN (Tripartite motif-containing protein 65 OS=Homo sapiens GN=TRIM65 PE=1 SV=3)

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-11
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 1 

Query: 145 LREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLISNGRSCTVNTV 204
           L E+L+CAICL +  +P T PCGH+FC  C+R   D+CGK CP+CR+   +G     N  
Sbjct: 6   LEEKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKACPECREPFPDGAELRRNVA 65

Query: 205 LWNTIQLL 213
           L   ++++
Sbjct: 66  LSGVLEVV 73

[Close]
BLAST of Cucsa.156350 vs. Swiss-Prot
Match: RN168_DANRE (E3 ubiquitin-protein ligase RNF168 OS=Danio rerio GN=rnf168 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-11
Identity = 36/81 (44.44%), Postives = 43/81 (53.09%), Query Frame = 1 

Query: 146 REELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLIS-----NGRSCT 205
           R +  C +CLEI  EP T PC H+FCK C     DK    CP CR+ +S     N R+ T
Sbjct: 21  RSDCVCPVCLEIFLEPVTLPCMHTFCKPCFLETVDKSNMCCPLCRKRVSTWARLNSRNKT 80

Query: 206 -VNTVLWNTIQLLFPKEVEAR 221
            VN  LW  IQ  FP + E R
Sbjct: 81  LVNMELWRRIQDAFPSQCERR 101

[Close]
BLAST of Cucsa.156350 vs. Swiss-Prot
Match: RN168_MOUSE (E3 ubiquitin-protein ligase RNF168 OS=Mus musculus GN=Rnf168 PE=1 SV=3)

HSP 1 Score: 68.9 bits (167), Expect = 7.9e-11
Identity = 33/84 (39.29%), Postives = 44/84 (52.38%), Query Frame = 1 

Query: 148 ELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLISN------GRSCTV 207
           E  C IC+EI  EP T PC H+ C  C +S  +K    CP CR+ +S+       R+  V
Sbjct: 13  ECQCGICMEILLEPVTLPCNHTLCNPCFQSTVEKANLCCPFCRRRVSSWTRYHTRRNSLV 72

Query: 208 NTVLWNTIQLLFPKEVEARKEARE 226
           NT LW  IQ  + KE + R   +E
Sbjct: 73  NTDLWEIIQKHYAKECKLRISGQE 96

[Close]
BLAST of Cucsa.156350 vs. TrEMBL
Match: A0A0A0LBY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G592120 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 5.5e-120
Identity = 222/226 (98.23%), Postives = 224/226 (99.12%), Query Frame = 1 

Query: 1   MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQ 60
           MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQ
Sbjct: 1   MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQ 60

Query: 61  QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK 120
           QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK
Sbjct: 61  QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK 120

Query: 121 KSDSMVEQKADASSLTSSTLP-LDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAA 180
           KSDSMVEQKADASSLTSSTLP +DKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAA
Sbjct: 121 KSDSMVEQKADASSLTSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAA 180

Query: 181 DKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEARE 226
           DKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEA+E
Sbjct: 181 DKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEAKE 226

[Close]
BLAST of Cucsa.156350 vs. TrEMBL
Match: A0A067EMB8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044354mg PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.4e-70
Identity = 144/225 (64.00%), Postives = 166/225 (73.78%), Query Frame = 1 

Query: 6   STASASESKPL-GIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKKR 65
           S     E  P+ G     +S  SPRFKS AAMAGWDEEA+L ASLVV+DTP+RE +QK+R
Sbjct: 9   SLRDQKEPNPVAGNGQSTESLFSPRFKSVAAMAGWDEEAILVASLVVEDTPDRESKQKRR 68

Query: 66  SVLQRKSPASGSRRKRRTLT-SIISIPVAVLDLDETEPTVKDDGPK-----QEPKSAEAE 125
             L  K+P S SRRKRR    S +SIP+AVLDLDE E + ++ G       +E K+ E +
Sbjct: 69  FDLPFKTPPSNSRRKRRLQKRSPVSIPIAVLDLDEGESSGQESGKNKVQLNEEKKTKEEK 128

Query: 126 AKKSDSMVEQKADASSLTSSTLPLDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSA 185
           +   D + E   D SS +S    +DKLREELSCAICLEICFEPSTT CGHSFCKKCLRSA
Sbjct: 129 SVGGDELTEPSNDGSSSSSVLTCIDKLREELSCAICLEICFEPSTTTCGHSFCKKCLRSA 188

Query: 186 ADKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEA 224
           ADKCGK+CPKCRQLISNGRSCTVNTVLWNTIQLLFP+EVEARK A
Sbjct: 189 ADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPQEVEARKAA 233

[Close]
BLAST of Cucsa.156350 vs. TrEMBL
Match: V4UDQ4_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10017544mg PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-70
Identity = 144/225 (64.00%), Postives = 166/225 (73.78%), Query Frame = 1 

Query: 6   STASASESKPL-GIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKKR 65
           S     E  P+ G     +S  SPRFKS AAMAGWDEEA+L ASLVV+DTP+RE +QK+R
Sbjct: 568 SLRDQKEPNPVAGNGQSTESLFSPRFKSVAAMAGWDEEAILVASLVVEDTPDRESKQKRR 627

Query: 66  SVLQRKSPASGSRRKRRTLT-SIISIPVAVLDLDETEPTVKDDGPKQ-----EPKSAEAE 125
             L  K+P S SRRKRR    S +SIP+AVLDLDE E + ++ G  +     E K+ E +
Sbjct: 628 FDLPFKTPPSNSRRKRRLQKRSPVSIPIAVLDLDEGESSGQESGKNKVQLNDEKKTKEEK 687

Query: 126 AKKSDSMVEQKADASSLTSSTLPLDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSA 185
           +   D + E   D SS +S    +DKLREELSCAICLEICFEPSTT CGHSFCKKCLRSA
Sbjct: 688 SVGGDELTEPSNDGSSSSSVLTCIDKLREELSCAICLEICFEPSTTTCGHSFCKKCLRSA 747

Query: 186 ADKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEA 224
           ADKCGK+CPKCRQLISNGRSCTVNTVLWNTIQLLFP+EVEARK A
Sbjct: 748 ADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPQEVEARKAA 792

[Close]
BLAST of Cucsa.156350 vs. TrEMBL
Match: F6GX56_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0219g00030 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.7e-68
Identity = 150/234 (64.10%), Postives = 173/234 (73.93%), Query Frame = 1 

Query: 1   MVSEGSTASASESKPLGIAND--ADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPERE 60
           MV + S  S  E +   + ND  A+   SPRFKS AA+AGWDEEALL ASLVV+DTP+R 
Sbjct: 1   MVRQESKQSP-EKQSESVENDGSAECVFSPRFKSVAALAGWDEEALLIASLVVEDTPDRL 60

Query: 61  FQQKKRSVLQRKSPASGSRRKRRTLT-SIISIPVAVLDLDETEPTVKDDGPKQ-EPKSAE 120
            + KKRS L  K+P S SRRKRRT   S  SIPV VLDLDE E   ++   K+ E K+AE
Sbjct: 61  VKHKKRSDLTFKTPPSNSRRKRRTQRRSPASIPVTVLDLDEGENAKEESEKKKIETKTAE 120

Query: 121 AEAKKSDSMVEQKADAS------SLTSSTLP-LDKLREELSCAICLEICFEPSTTPCGHS 180
            E K      +Q A++S      S ++S LP +D+LREELSCAICLEICFEPSTTPCGHS
Sbjct: 121 HEEKNVTGDKQQGAESSAASCSASTSTSVLPCMDRLREELSCAICLEICFEPSTTPCGHS 180

Query: 181 FCKKCLRSAADKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEA 224
           FCKKCLRSAADKCGKRC KCRQ++SNGRSCTVNTVLWNTIQLLFP+EVEARK A
Sbjct: 181 FCKKCLRSAADKCGKRCSKCRQMMSNGRSCTVNTVLWNTIQLLFPQEVEARKAA 233

[Close]
BLAST of Cucsa.156350 vs. TrEMBL
Match: M5X715_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018846mg PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.7e-68
Identity = 142/213 (66.67%), Postives = 169/213 (79.34%), Query Frame = 1 

Query: 17  GIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKKRSVLQRKSP-ASG 76
           G + D+  F SPRFKS AAMAGWDEE+LL ASLVVDDTPER+ + KKRS L  K+P  + 
Sbjct: 598 GTSGDSSMF-SPRFKSVAAMAGWDEESLLIASLVVDDTPERQVKYKKRSDLHFKTPPTNS 657

Query: 77  SRRKRRTLT-SIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKKSDSMVEQKADASS 136
           SRRKRR    S IS+PVAVL+LD+ E T KD+  K++ +      K+ ++  ++ A++S 
Sbjct: 658 SRRKRRAQRRSPISMPVAVLNLDDDEETKKDESGKEKEEPQIIVNKEKETRDDKMAESSG 717

Query: 137 LT---SSTLP-LDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCR 196
           ++   SS LP LDKLR+ELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCR
Sbjct: 718 VSCPPSSNLPCLDKLRDELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCR 777

Query: 197 QLISNGRSCTVNTVLWNTIQLLFPKEVEARKEA 224
           QL+S+ RSCTVNTVLWNTIQLLFP+EVEARK A
Sbjct: 778 QLMSHSRSCTVNTVLWNTIQLLFPQEVEARKAA 809

[Close]
BLAST of Cucsa.156350 vs. TAIR10
Match: AT3G27330.1 (AT3G27330.1 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 242.3 bits (617), Expect = 2.9e-64
Identity = 129/231 (55.84%), Postives = 164/231 (71.00%), Query Frame = 1 

Query: 2   VSEGSTASASESKPLGIAND-----ADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPE 61
           V+  S   ++ SK + IA +     A+ F+SPRFKSAAAMAGWDEE L+ AS VVDDTPE
Sbjct: 568 VTNRSGDGSNGSKEVSIAREKNGENAEIFISPRFKSAAAMAGWDEEDLIIASFVVDDTPE 627

Query: 62  REFQQKKR--SVLQRKSPASGS-RRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPK 121
           R   +++R  ++L + +P SGS RR +R   S++ +PV  +DLD+     ++   +++ K
Sbjct: 628 RSSSKRRRRSNLLFKSTPPSGSSRRNQRVKQSLVPLPV--IDLDKVIRHEEEKSAEKKKK 687

Query: 122 SAEAEAKKSDSMVEQKADASSLTSSTLP-LDKLREELSCAICLEICFEPSTTPCGHSFCK 181
             E E +  +     K + S      LP +DKLR+ELSCAICLEICFEPSTT CGHSFCK
Sbjct: 688 KREMETETKEEKKIDKDEKSLSDHVVLPCIDKLRDELSCAICLEICFEPSTTTCGHSFCK 747

Query: 182 KCLRSAADKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEA 224
           KCLRSAADKCG++CPKCRQLI NGR CTVNTVLWNTIQLLFPKEVEA++ A
Sbjct: 748 KCLRSAADKCGRKCPKCRQLIGNGRYCTVNTVLWNTIQLLFPKEVEAQRAA 796

[Close]
BLAST of Cucsa.156350 vs. TAIR10
Match: AT1G18660.4 (AT1G18660.4 zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 77.8 bits (190), Expect = 9.6e-15
Identity = 33/80 (41.25%), Postives = 52/80 (65.00%), Query Frame = 1 

Query: 147 EELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLI-SNGRSCTVNTVL 206
           ++  C +CL++ +EP+TTPCGH+FC+ CL  + D+ G +CP CR +I    R+C V+  L
Sbjct: 192 DDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDR-GNKCPLCRTVIFMTPRTCAVSVTL 251

Query: 207 WNTIQLLFPKEVEARKEARE 226
            N I+  FP+E   RK  ++
Sbjct: 252 NNIIEKNFPEEYAERKSEQD 270

[Close]
BLAST of Cucsa.156350 vs. TAIR10
Match: AT5G39550.1 (AT5G39550.1 Zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.5e-07
Identity = 47/176 (26.70%), Postives = 75/176 (42.61%), Query Frame = 1 

Query: 39  WDEEALLFASLVVDDTPEREFQQKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDE 98
           W    LL  SL    T E E       V+   +P +G+ R   +  S++   +  +  DE
Sbjct: 37  WHVPCLLPESLA-SSTGEWECPDCSGVVVPSAAPGTGNARPESS-GSVLVAAIRAIQADE 96

Query: 99  TEPTVKDDGPKQEPKSAEAEAKKSDSMVEQKADASSLTSSTLPLDKLREELSCAICLEIC 158
           T    +    +Q+  S   +    D + E+              +K + E+ C+IC+++ 
Sbjct: 97  TLTEAEKAKKRQKLMSGGGD----DGVDEE--------------EKKKLEIFCSICIQLP 156

Query: 159 FEPSTTPCGHSFCKKCLRSAADKCGK-RCPKCRQLISN--GRSCTVNTVLWNTIQL 212
             P TTPCGH+FC KC    A   GK  C  CR  I     ++  +N  L + I+L
Sbjct: 157 ERPITTPCGHNFCLKCFEKWAVGQGKLTCMICRSKIPRHVAKNPRINLALVSAIRL 192

[Close]
BLAST of Cucsa.156350 vs. TAIR10
Match: AT1G57820.1 (AT1G57820.1 Zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 52.8 bits (125), Expect = 3.3e-07
Identity = 34/142 (23.94%), Postives = 62/142 (43.66%), Query Frame = 1 

Query: 72  PASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKKSDSMVEQKAD 131
           P SG      +  S +   +  ++ DE+  T +    +Q   S +   ++ D   ++K  
Sbjct: 68  PVSGGATGFESAGSDLVAAIRAIEADESLSTEEKAKMRQRLLSGKG-VEEDDEEEKRKKK 127

Query: 132 ASSLTSSTLPLDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQ 191
                 +   L  L + L C+ C+++   P T PCGH+ C KC      +  + C KCR 
Sbjct: 128 GKGKNPNLDVLSALGDNLMCSFCMQLPERPVTKPCGHNACLKCFEKWMGQGKRTCGKCRS 187

Query: 192 LISN--GRSCTVNTVLWNTIQL 212
           +I     ++  +N+ L   I+L
Sbjct: 188 IIPEKMAKNPRINSSLVAAIRL 208

[Close]
BLAST of Cucsa.156350 vs. TAIR10
Match: AT1G66050.1 (AT1G66050.1 Zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-06
Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 1 

Query: 143 DKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGK-RCPKCRQLISN--GRSC 202
           +K + E+ C+IC+++   P TTPCGH+FC KC    A   GK  C  CR  I     ++ 
Sbjct: 121 EKKKLEIFCSICIQLPERPVTTPCGHNFCLKCFEKWAVGQGKLTCMICRSKIPRHVAKNP 180

Query: 203 TVNTVLWNTIQL 212
            +N  L + I+L
Sbjct: 181 RINLALVSAIRL 192

[Close]
BLAST of Cucsa.156350 vs. NCBI nr
Match: gi|449455962|ref|XP_004145719.1| (PREDICTED: uncharacterized protein LOC101209296 [Cucumis sativus])

HSP 1 Score: 438.3 bits (1126), Expect = 7.9e-120
Identity = 222/226 (98.23%), Postives = 224/226 (99.12%), Query Frame = 1 

Query: 1   MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQ 60
           MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQ
Sbjct: 1   MVSEGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQ 60

Query: 61  QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK 120
           QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK
Sbjct: 61  QKKRSVLQRKSPASGSRRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAK 120

Query: 121 KSDSMVEQKADASSLTSSTLP-LDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAA 180
           KSDSMVEQKADASSLTSSTLP +DKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAA
Sbjct: 121 KSDSMVEQKADASSLTSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAA 180

Query: 181 DKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEARE 226
           DKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEA+E
Sbjct: 181 DKCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEAKE 226

[Close]
BLAST of Cucsa.156350 vs. NCBI nr
Match: gi|659098268|ref|XP_008450054.1| (PREDICTED: LON peptidase N-terminal domain and RING finger protein 3-like [Cucumis melo])

HSP 1 Score: 403.3 bits (1035), Expect = 2.8e-109
Identity = 206/225 (91.56%), Postives = 210/225 (93.33%), Query Frame = 1 

Query: 4   EGSTASASESKPLGIANDADSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKK 63
           EGSTA  SE KPLGIANDADSFLSPRFKSAAAMAGWDEEALL ASLVVDDTPEREFQQKK
Sbjct: 6   EGSTAGTSELKPLGIANDADSFLSPRFKSAAAMAGWDEEALLIASLVVDDTPEREFQQKK 65

Query: 64  RSVLQRKSPASGS--RRKRRTLTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKK 123
           RS LQRKSPAS S  RRKRRTLTSIISIPV VLDL+E EP VKDDGPKQEPK AEAEAKK
Sbjct: 66  RSDLQRKSPASASASRRKRRTLTSIISIPVTVLDLEEEEPAVKDDGPKQEPKYAEAEAKK 125

Query: 124 SDSMVEQKADASSLTSSTLP-LDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAAD 183
            DSMVEQKADASSL+SSTLP +DKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAAD
Sbjct: 126 CDSMVEQKADASSLSSSTLPCMDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAAD 185

Query: 184 KCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEARE 226
           KCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKE +E
Sbjct: 186 KCGKRCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVEARKEVKE 230

[Close]
BLAST of Cucsa.156350 vs. NCBI nr
Match: gi|658012173|ref|XP_008341352.1| (PREDICTED: tripartite motif-containing protein 65-like isoform X1 [Malus domestica])

HSP 1 Score: 280.8 bits (717), Expect = 2.1e-72
Identity = 150/202 (74.26%), Postives = 160/202 (79.21%), Query Frame = 1 

Query: 27  SPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKKRSVLQRKSP-ASGSRRKRRT-LT 86
           SPRFKS AAMAGWDEE+LL ASLVVDDTPER+F+ KKRSVL  K+P  + SRRKRR    
Sbjct: 40  SPRFKSVAAMAGWDEESLLVASLVVDDTPERDFKHKKRSVLBSKTPPTNSSRRKRRAPRR 99

Query: 87  SIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKKSDSMVEQKADASS----LTSSTL 146
           S ISIPVAVLDLD+ E T KD+G K++    E  A K     E K   SS      SS L
Sbjct: 100 SPISIPVAVLDLDDAEETAKDEGGKEKKVELEIFANKDKETREDKMAESSGGSCPPSSNL 159

Query: 147 P-LDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLISNGRSC 206
           P LDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLISN RSC
Sbjct: 160 PCLDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLISNSRSC 219

Query: 207 TVNTVLWNTIQLLFPKEVEARK 222
           TVNTVLWNTIQLLFP+EVEARK
Sbjct: 220 TVNTVLWNTIQLLFPQEVEARK 241

[Close]
BLAST of Cucsa.156350 vs. NCBI nr
Match: gi|658012175|ref|XP_008341353.1| (PREDICTED: tripartite motif-containing protein 65-like isoform X2 [Malus domestica])

HSP 1 Score: 278.1 bits (710), Expect = 1.4e-71
Identity = 147/200 (73.50%), Postives = 157/200 (78.50%), Query Frame = 1 

Query: 27  SPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKKRSVLQRKSPASGSRRKRRTLTSI 86
           SPRFKS AAMAGWDEE+LL ASLVVDDTPER+F+ KKRSVL  K+P + S R R    S 
Sbjct: 40  SPRFKSVAAMAGWDEESLLVASLVVDDTPERDFKHKKRSVLBSKTPPTNSSR-RAPRRSP 99

Query: 87  ISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKKSDSMVEQKADASS----LTSSTLP- 146
           ISIPVAVLDLD+ E T KD+G K++    E  A K     E K   SS      SS LP 
Sbjct: 100 ISIPVAVLDLDDAEETAKDEGGKEKKVELEIFANKDKETREDKMAESSGGSCPPSSNLPC 159

Query: 147 LDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLISNGRSCTV 206
           LDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLISN RSCTV
Sbjct: 160 LDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLISNSRSCTV 219

Query: 207 NTVLWNTIQLLFPKEVEARK 222
           NTVLWNTIQLLFP+EVEARK
Sbjct: 220 NTVLWNTIQLLFPQEVEARK 238

[Close]
BLAST of Cucsa.156350 vs. NCBI nr
Match: gi|1021530668|ref|XP_016162287.1| (PREDICTED: tripartite motif-containing protein 75 [Arachis ipaensis])

HSP 1 Score: 276.2 bits (705), Expect = 5.2e-71
Identity = 140/202 (69.31%), Postives = 159/202 (78.71%), Query Frame = 1 

Query: 23  DSFLSPRFKSAAAMAGWDEEALLFASLVVDDTPEREFQQKKRSVLQRKSPASGSRRKRRT 82
           D+  SPRFKSAAAMAGWDEEALL ASLVV+DTP+R+F+ KKRSVL  K+P + SRRKRR 
Sbjct: 29  DAVFSPRFKSAAAMAGWDEEALLLASLVVEDTPDRDFKHKKRSVLNSKTPPTNSRRKRRA 88

Query: 83  LTSIISIPVAVLDLDETEPTVKDDGPKQEPKSAEAEAKKSDSMVEQKADASSLTSSTLP- 142
            +S  SI VAVLDLDE +   KD   K + K A    +  +   E   + S + +  LP 
Sbjct: 89  QSSPESIRVAVLDLDEEDTPRKDSKEKTKEKKATVNEESKEGGKESTKEKSGVAA--LPC 148

Query: 143 LDKLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKRCPKCRQLISNGRSCTV 202
           +DKLR+ELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGK+CPKCRQLI NGRSCTV
Sbjct: 149 IDKLRDELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLIGNGRSCTV 208

Query: 203 NTVLWNTIQLLFPKEVEARKEA 224
           NTVLWNTIQLLFP+EVEARK A
Sbjct: 209 NTVLWNTIQLLFPQEVEARKAA 228

The following BLAST results are available for this feature:
BLAST of Cucsa.156350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RN168_BOVIN7.2e-1244.05E3 ubiquitin-protein ligase RNF168 OS=Bos taurus GN=RNF168 PE=2 SV=2[more]
RN168_HUMAN9.4e-1238.30E3 ubiquitin-protein ligase RNF168 OS=Homo sapiens GN=RNF168 PE=1 SV=1[more]
TRI65_HUMAN1.2e-1142.65Tripartite motif-containing protein 65 OS=Homo sapiens GN=TRIM65 PE=1 SV=3[more]
RN168_DANRE2.7e-1144.44E3 ubiquitin-protein ligase RNF168 OS=Danio rerio GN=rnf168 PE=2 SV=1[more]
RN168_MOUSE7.9e-1139.29E3 ubiquitin-protein ligase RNF168 OS=Mus musculus GN=Rnf168 PE=1 SV=3[more]
BLAST of Cucsa.156350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBY2_CUCSA5.5e-12098.23Uncharacterized protein OS=Cucumis sativus GN=Csa_3G592120 PE=4 SV=1[more]
A0A067EMB8_CITSI1.4e-7064.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044354mg PE=4 SV=1[more]
V4UDQ4_9ROSI1.8e-7064.00Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10017544mg PE=... [more]
F6GX56_VITVI1.7e-6864.10Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0219g00030 PE=4 SV=... [more]
M5X715_PRUPE1.7e-6866.67Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018846mg PE=4 SV=1[more]
BLAST of Cucsa.156350 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G27330.12.9e-6455.84 zinc finger (C3HC4-type RING finger) family protein[more]
AT1G18660.49.6e-1541.25 zinc finger (C3HC4-type RING finger) family protein[more]
AT5G39550.12.5e-0726.70 Zinc finger (C3HC4-type RING finger) family protein[more]
AT1G57820.13.3e-0723.94 Zinc finger (C3HC4-type RING finger) family protein[more]
AT1G66050.11.3e-0637.50 Zinc finger (C3HC4-type RING finger) family protein[more]
BLAST of Cucsa.156350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449455962|ref|XP_004145719.1|7.9e-12098.23PREDICTED: uncharacterized protein LOC101209296 [Cucumis sativus][more]
gi|659098268|ref|XP_008450054.1|2.8e-10991.56PREDICTED: LON peptidase N-terminal domain and RING finger protein 3-like [Cucum... [more]
gi|658012173|ref|XP_008341352.1|2.1e-7274.26PREDICTED: tripartite motif-containing protein 65-like isoform X1 [Malus domesti... [more]
gi|658012175|ref|XP_008341353.1|1.4e-7173.50PREDICTED: tripartite motif-containing protein 65-like isoform X2 [Malus domesti... [more]
gi|1021530668|ref|XP_016162287.1|5.2e-7169.31PREDICTED: tripartite motif-containing protein 75 [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR018957Znf_C3HC4_RING-type
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.156350.1Cucsa.156350.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 151..189
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 151..190
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 133..216
score: 3.7
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 166..175
scor
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 151..189
score: 3.
NoneNo IPR availablePANTHERPTHR23328UNCHARACTERIZEDcoord: 104..225
score: 1.0
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 143..214
score: 1.63