Cucsa.152680 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.152680
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	scaffold01124 : 74787 .. 77365 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGGGGTCCGTCTAGAGTGTTGGCTTATAGTGGTAAGCGTTGAGTTGGGTTGGTTTGTTACCTTGATCACACTTGTTTAACTTGATTTTATCTTTTAACAAAAAAAaTGAAGGTAGAAGAGGTTTTTGTTTGGTTTTACAATATGATTGAGACCTAGTCTCAAACTAAAATCCGCATTCTTCACTCTGATAATAGTACTGAATATTTTAACAAACAATTAACTTATTTTTTGCAAGATAAGGGTATTTTTCCATCAAGCTACATGTCAAGATACTCTTTAGCAAAATGACGTCGTTGAGCGAAAAAATAGATATTTACTTGAAGTTGCTTGTGCCCTTATGCTTTCTATGCATGTACCAAAATATTTGTGTGGTGATGCAGTCCTTACTGCTGCATACCTCATAAATCAAATGCCAACCAAGATTTTGAATTTTAAAACTCCTTTGAGTCGCTTCAAAACGGGTTTTTTCCTACTGTTAGATTGTTTTCTGACTTAACAATAAAAGTATTTGGGTGTATTGTTTATGTTCATATTCTTTACCCTATACTAACTAAACTTGATCCTTGAGCCGTTAAATACATTTCTGTATGCTATGTCTCCCATAAGAAGGCTTTCAAATGTTTTGACCCTTCAACCAAAAAGTTTTTGGAGAGTATGGACGTGCCTTTCTGTCTTCAAAGGGAGACATCTAACCTCGAAGATAATTTCTAGGACACTTCACTTACCCCAGACATCATTGGTCCTGAAATTATGAGTTATAATCCCTTGATGCCAAGTGTGGAAAGTTCTTCTTTAGGGAAGAAACACTACAAAAACCTGAACTTCAGATTTATACTAGAAAAACCTTGCCTCAAAGTAATTGAGAATAAACAGTTGATCTATCATAGGACCAATCTAATTCTTCGATGAATGATTCTGCAGATCTAGGTAACATACATCTCCTTCTCATAATTCTCCCAGTACTTCTCATAATTTTCCTAGTTCTCCTTACCCGATGTCTCTAATCTTGACATTCCAATTGCCCATAGGAAAATCACCCGTAAAGGTGCCAAATATCCCATTGCAAACTATCTTTCTTTATCACAGATTATCTAACAGTCATAAAGCCTTCACATCCAAAATAAACCACCTATTTGTTAGAAGGAATACACAGGAGGCCCTAAATGATTTGAATTGGAAAGTGGCAGTAATGGAAGAGATGAATGCACTGAAACAAAACTGCACATGGGACATAGTTGAACTACCTAAAAACAAGAAAACGGTTGGATGTAAGCGAGTGTTCACTGTATAATGTAAAGCTGATGGTAGTATTGAAAGGTACGAGGTCAGATTGGTTGCTAAGAAATTTACTCTGACCTATGGAGTTGATTATCAAGAAATATTTGCTCCAGTTGCTGAAATTAATTCCATAAGAATTTTGCTACATGTTGCAGTTAATTTTGATTGCCACTTTATCAACTGGATGTTAAGAATGACTTTCTCAATTGGATCATGAAGAAGAGGTATTTATACGTTTGCTACCTGGTTTTGAGGTGATCTCAGGATTAACAAAGTGTGAGTTAAAGTAATCATTATATGAGTCTCCTAGAGTCTGGTTTGAACGTTTTAAAAAAGCAGTCACAAGCTATGGATCTAGTCAAAGTCAAGTCAATCGTACTATGCTCTATAAACATACAGGAAATGACAAGGTTATGTTTTTGATAGTTTATGTTCATGATATCATTTTTGATGAGACATGACTTTCTTGAAGAAAAAGTTAGTTGATGATTTTCAAATCAGACACCTAGGAACTATGAAATATTAACCAGGCATGGAGTTTACTAGGTCCAGAAGTGGCATTCTTGTCAACCGAAGGAAGTATATTTTTTATCTACGGAAAGAAATAGGTTTACTTGGCTGTAGGGTGGTTGAAACTCCTATTAAGCAGAACTTGAAATTAGAAGTTGTTGAAAAAGAAATAAAAGAAAAAGAGAAGTATCAGAGATTTGTGGGGAGACTTACATATCTCGATCACACACGTCCTGACATCGCTTTCGCAGTGAATACTTAGTATGGGAAGTCAGTTCATGCATGCTCCTGGACCAGCTCACTTTGATGTTCACAGAATTCTAATATATTTGAAAAGTACTCTAGGAAAAGGCATATTGTTTTAAAAACATGACCACTAAATGTCGAAGTGTACACTGATACAGATTGGTTAGGTAGTACAACTGATAAAAGAGCCACTTCTGGTTATTGCTTTTGTTGGAGGAAATTTAGTTACTTGATGAAGCAAAAAATAGAGCATGGTTGCGAGTAGCGCAGAAGCAGAATTTAAAGCATCAACCCATGGTATTTGTAAGGGCATATGGATAAGAAGACTATTGGAAGAATTGAGATTCTCCCAGAAAATGCCTATGCTCATTTATTGTGATAACAAGGCAACAATTTCCATTGCCCACAGTCCAGTCCTTCATGATAGGACGGAACATAGTGAAGGTGATAAACACTTTATGAAGGAAAAGATTGTTCAAGGGATAATATGCATCCCTTATCTTTTGAGAACAAAACAAATCGCAAATGTGTTAACTAAAG

mRNA sequence

ATGTGTGGGGTCCGTCTAGAGTGTTGGCTTATAGTGGTAAGCGTTGAGTTGGGTTGGTTTcaaaatgacgtcgttgagcgaaaaaatagatatttacttgaagttgcttgtgcccttatgctttctatgcatgtaccaaaatatttgtgtggtgatgcagtccttactgctgcatacctcataaatcaaatgccaaccaagattttgaattttaaaactcctttgagtcgcttcaaaacgggaaaatcacccgtaaaggtgccaaatatcccattgcaaactatctttctttatcacagattatctaacagtcataaagccttcacatccaaaataaaccacctatttgttagaaggaatacacaggaggccctaaatgatttgaattggaaagtggcagtaatggaagagatgaatgcactgaaacaaaactgcacatgggacatagttgaactacctaaaaacaagaaaacggttggatctgatggtagtattgaaaggtacgaggtcagattggttgctaagaaatttactctgacctatggagttgattatcaagaaatatttgctccagttgctgaaattaattccataagaattttgctacatgttgcacagtcacaagctatggatctagtcaaagtcaagtcaatcgtactatgctctataaacatacaggaaatgacaaggttatgcatggagtttactaggtccagaagtggcattcttgtcaaccgaaggaagtatattttttatctacggaaagaaataggtttacttggctgtagggtggttgaaactcctattaagcagaacttgaaattagaagttgttgaaaaagaaataaaagaaaaagagaagtatcagagatttgtggggagacttacatatctcgatcacacacgtcctgacatcgctttcgcaagcatggttgcgagtagcgcagaagcagaatttaaagcatcaacccatggtatttgtaagggcatatggataagaagactattggaagaattgagattctcccagaaaatgcctatgctcatttattgtgataacaaggcaacaatttccattgcccacagtccagtccttcatgataggacggaacatagtgaaggtgataaacactttatgaaggaaaagattgttcaagggataatatgcatcccttatcttttgagaacaaaacaaatcgcaaatgtgttaactaaag

Coding sequence (CDS)

ATGTGTGGGGTCCGTCTAGAGTGTTGGCTTATAGTGGTAAGCGTTGAGTTGGGTTGGTTTCAAAATGACGTCGTTGAGCGAAAAAATAGATATTTACTTGAAGTTGCTTGTGCCCTTATGCTTTCTATGCATGTACCAAAATATTTGTGTGGTGATGCAGTCCTTACTGCTGCATACCTCATAAATCAAATGCCAACCAAGATTTTGAATTTTAAAACTCCTTTGAGTCGCTTCAAAACGGGAAAATCACCCGTAAAGGTGCCAAATATCCCATTGCAAACTATCTTTCTTTATCACAGATTATCTAACAGTCATAAAGCCTTCACATCCAAAATAAACCACCTATTTGTTAGAAGGAATACACAGGAGGCCCTAAATGATTTGAATTGGAAAGTGGCAGTAATGGAAGAGATGAATGCACTGAAACAAAACTGCACATGGGACATAGTTGAACTACCTAAAAACAAGAAAACGGTTGGATCTGATGGTAGTATTGAAAGGTACGAGGTCAGATTGGTTGCTAAGAAATTTACTCTGACCTATGGAGTTGATTATCAAGAAATATTTGCTCCAGTTGCTGAAATTAATTCCATAAGAATTTTGCTACATGTTGCACAGTCACAAGCTATGGATCTAGTCAAAGTCAAGTCAATCGTACTATGCTCTATAAACATACAGGAAATGACAAGGTTATGCATGGAGTTTACTAGGTCCAGAAGTGGCATTCTTGTCAACCGAAGGAAGTATATTTTTTATCTACGGAAAGAAATAGGTTTACTTGGCTGTAGGGTGGTTGAAACTCCTATTAAGCAGAACTTGAAATTAGAAGTTGTTGAAAAAGAAATAAAAGAAAAAGAGAAGTATCAGAGATTTGTGGGGAGACTTACATATCTCGATCACACACGTCCTGACATCGCTTTCGCAAGCATGGTTGCGAGTAGCGCAGAAGCAGAATTTAAAGCATCAACCCATGGTATTTGTAAGGGCATATGGATAAGAAGACTATTGGAAGAATTGAGATTCTCCCAGAAAATGCCTATGCTCATTTATTGTGATAACAAGGCAACAATTTCCATTGCCCACAGTCCAGTCCTTCATGATAGGACGGAACATAGTGAAGGTGATAAACACTTTATGAAGGAAAAGATTGTTCAAGGGATAATATGCATCCCTTATCTTTTGAGAACAAAACAAATCGCAAATGTGTTAACTAAAG

Protein sequence

MCGVRLECWLIVVSVELGWFQNDVVERKNRYLLEVACALMLSMHVPKYLCGDAVLTAAYLINQMPTKILNFKTPLSRFKTGKSPVKVPNIPLQTIFLYHRLSNSHKAFTSKINHLFVRRNTQEALNDLNWKVAVMEEMNALKQNCTWDIVELPKNKKTVGSDGSIERYEVRLVAKKFTLTYGVDYQEIFAPVAEINSIRILLHVAQSQAMDLVKVKSIVLCSINIQEMTRLCMEFTRSRSGILVNRRKYIFYLRKEIGLLGCRVVETPIKQNLKLEVVEKEIKEKEKYQRFVGRLTYLDHTRPDIAFASMVASSAEAEFKASTHGICKGIWIRRLLEELRFSQKMPMLIYCDNKATISIAHSPVLHDRTEHSEGDKHFMKEKIVQGIICIPYLLRTKQIANVLTKX

Homology

[Close]

BLAST of Cucsa.152680 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 75.1 bits (183), Expect = 2.0e-12
Identity = 34/97 (35.05%), Postives = 58/97 (59.79%), Query Frame = 1


Query: 309  SMVASSAEAEFKASTHGICKGIWIRRLLEELRFSQKMPMLIYCDNKATISIAHSPVLHDR 368
            S+ ASS EAE+ A    + + +W++ LL  +    + P+ IY DN+  ISIA++P  H R
Sbjct: 1288 SVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKR 1347

Query: 369  TEHSEGDKHFMKEKIVQGIICIPYLLRTKQIANVLTK 406
             +H +   HF +E++   +IC+ Y+    Q+A++ TK
Sbjct: 1348 AKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTK 1384

HSP 2 Score: 68.2 bits (165), Expect = 2.4e-10
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1


Query: 129 NWKVAVMEEMNALKQNCTWDIVELPKNKKTVGSD----------GSIERYEVRLVAKKFT 188
           +W+ A+  E+NA K N TW I + P+NK  V S           G+  RY+ RLVA+ FT
Sbjct: 905 SWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFT 964

Query: 189 LTYGVDYQEIFAPVAEINSIRILL 203
             Y +DY+E FAPVA I+S R +L
Sbjct: 965 QKYQIDYEETFAPVARISSFRFIL 988

HSP 3 Score: 41.6 bits (96), Expect = 2.4e-02
Identity = 29/92 (31.52%), Postives = 47/92 (51.09%), Query Frame = 1


Query: 22  NDVVERKNRYLLEVACALMLSMHVPKYLCGDAVLTAAYLINQMPTKIL--NFKTPLSRFK 81
           N V ER  R + E A  ++    + K   G+AVLTA YLIN++P++ L  + KTP   + 
Sbjct: 582 NGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWH 641

Query: 82  TGKSPVKVPNIPLQTIFLYHRLSNSHKAFTSK 112
             K  +K   +   T++++  + N    F  K
Sbjct: 642 NKKPYLKHLRVFGATVYVH--IKNKQGKFDDK 671

[Close]

BLAST of Cucsa.152680 vs. Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.7e-09
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 1


Query: 124 ALNDLNWKVAVMEEMNALKQNCTWDIVELPKNKKTVG----------SDGSIERYEVRLV 183
           AL D  W  A+ EE++AL +N TW +V  P N+  +G          SDG+++R + RLV
Sbjct: 34  ALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLV 93

Query: 184 AKKFTLTYGVDYQEIFAPVAEINSIRILLHVAQ 207
           AK F    G+ + E ++PV    +IR +L+VAQ
Sbjct: 94  AKGFHQEEGIYFVETYSPVVRTATIRTILNVAQ 126

[Close]

BLAST of Cucsa.152680 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.0e-09
Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 1


Query: 133 AVMEEMNALKQNCTWDIVELPKNKKTV----------GSDGSIERYEVRLVAKKFTLTYG 192
           A+ EEM +L++N T+ +VELPK K+ +            D  + RY+ RLV K F    G
Sbjct: 829 AMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKG 888

Query: 193 VDYQEIFAPVAEINSIRILLHVAQSQAMDL 213
           +D+ EIF+PV ++ SIR +L +A S  +++
Sbjct: 889 IDFDEIFSPVVKMTSIRTILSLAASLDLEV 918

HSP 2 Score: 54.3 bits (129), Expect = 3.6e-06
Identity = 28/93 (30.11%), Postives = 56/93 (60.22%), Query Frame = 1


Query: 313  SSAEAEFKASTHGICKGIWIRRLLEELRFSQKMPMLIYCDNKATISIAHSPVLHDRTEHS 372
            S+ EAE+ A+T    + IW++R L+EL   QK   ++YCD+++ I ++ + + H RT+H 
Sbjct: 1218 STTEAEYIAATETGKEMIWLKRFLQELGLHQK-EYVVYCDSQSAIDLSKNSMYHARTKHI 1277

Query: 373  EGDKHFMKEKIVQGIICIPYLLRTKQIANVLTK 406
            +   H+++E +    + +  +   +  A++LTK
Sbjct: 1278 DVRYHWIREMVDDESLKVLKISTNENPADMLTK 1309

HSP 3 Score: 43.5 bits (101), Expect = 6.4e-03
Identity = 22/53 (41.51%), Postives = 32/53 (60.38%), Query Frame = 1


Query: 22  NDVVERKNRYLLEVACALMLSMHVPKYLCGDAVLTAAYLINQMPTKILNFKTP 75
           N V ER NR ++E   +++    +PK   G+AV TA YLIN+ P+  L F+ P
Sbjct: 582 NGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIP 634

[Close]

BLAST of Cucsa.152680 vs. TrEMBL
Match: W9RJF7_9ROSA (E3 ubiquitin-protein ligase listerin OS=Morus notabilis GN=L484_003308 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.2e-55
Identity = 135/292 (46.23%), Postives = 178/292 (60.96%), Query Frame = 1


Query: 138 MNALKQNCTWDIVELPKNKKTVG----------SDGSIERYEVRLVAKKFTLTYGVDYQE 197
           MN LK++ T  I +LP+ KKTVG          +DGS+ERY+ RL+AK FT TYG+DYQE
Sbjct: 1   MNTLKKSGTRVIEDLPRGKKTVGCKWVFTVKCKADGSVERYKARLMAKGFTQTYGLDYQE 60

Query: 198 IFAPVAEINSIRILLHVAQSQAMDLVK--VKSIVLCSINIQEMTRLCME--FTRSRSGIL 257
            FAPVA+INSIR+LL +A +    L +  VK+  L   N++E   + +   F +  S   
Sbjct: 61  TFAPVAKINSIRVLLSLAVNSNWPLYQLDVKNAFLNG-NLEEEVFMSLPPGFEKFFSQDK 120

Query: 258 VNRRKYIFYLRKEIGLLGCRVVETPIKQNLKLEVVEKE-IKEKEKYQRFVGRLTYLDHTR 317
           V R K   Y        GC+  ETPI+ NLKL   + E + ++EK+QR VG+L YL HTR
Sbjct: 121 VCRLKKSLY--------GCKTAETPIEANLKLTPAKPEDVIDREKFQRLVGKLIYLSHTR 180

Query: 318 PDIAFA----------------SMVASSAEAEFKASTHGICKGIWIRRLLEELRFSQKMP 377
            DIAFA                  + SSA+AEF+   HGIC+ IWI+RL ++L  S  +P
Sbjct: 181 LDIAFAVSVMRIGQEARLIDDQKAIRSSAKAEFRFLAHGICEVIWIKRLFKDLNISVPLP 240

Query: 378 MLIYCDNKATISIAHSPVLHDRTEHSEGDKHFMKEKIVQGIICIPYLLRTKQ 399
           + +YCDNKA  SIAH+PVLHDRT+H E DKHF+KE I  G+IC+ Y   T Q
Sbjct: 241 IKVYCDNKAASSIAHNPVLHDRTKHIEVDKHFIKENIESGLICVSYAAFTAQ 283

[Close]

BLAST of Cucsa.152680 vs. TrEMBL
Match: A5B0T2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018707 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 8.5e-55
Identity = 148/366 (40.44%), Postives = 211/366 (57.65%), Query Frame = 1


Query: 65  PTKILNFKTPLSRFKTGKSPVKVPNIPLQTIFLYHRLSNSHKAFTSKINHLFVRRNTQEA 124
           PT+ L+   P++  K  ++  K P   +     Y  L  +++AFT+ I+ L V RN QEA
Sbjct: 151 PTQDLDLDLPIALRKGTRACTKYP---IAEYISYSNLFENYRAFTTNISKLMVPRNIQEA 210

Query: 125 LNDLNWKVAVMEEMNALKQNCTWDIVELPKNKKTVGSDGSIERYEVRLVAKKFTLTYGVD 184
           L++L WK+AV EEMNALK+N TW+             DGS+ERY+ R VAK FT TYG+D
Sbjct: 211 LDELIWKLAVFEEMNALKKNGTWESKV----------DGSVERYKARFVAKGFTQTYGID 270

Query: 185 YQEIFAPVAEINSIRILLH--VAQSQAMDLVKVKSIVLCSINIQEMTRLCMEFTRSRSGI 244
           YQE F PVA+INSIR+LL   V  +  +  + VK+  L +++++E   + M     +  I
Sbjct: 271 YQETFTPVAKINSIRVLLSLVVNSNWVLHQLDVKNTFL-NVDLEE--EVFMSPPPGKVAI 330

Query: 245 LVNRRKYIFYLRKEIGLLG--CRVVETPIKQNLKLEVVEK-EIKEKEKYQRFVG------ 304
           L+    Y+     +I L+G  C  +E      LK ++VE+ EIK+    + F+G      
Sbjct: 331 LI---AYV----DDIVLIGDDCNELE-----KLKGKLVEEFEIKDMGALKYFLGMKFSRS 390

Query: 305 --------RLTYLDHTRPDIAF------ASMVASSAEAEFKASTHGICKGIWIRRLLEEL 364
                   R   LD T  ++          +V SSAE +F+   HGIC  +WIRRL EEL
Sbjct: 391 KEGIFVNQRKYVLDETXGNLVTWRSKKQNMVVRSSAEDKFRVVAHGICDIMWIRRLPEEL 450

Query: 365 RFSQKMPMLIYCDNKATISIAHSPVLHDRTEHSEGDKHFMKEKIVQGIICIPYLLRTKQI 406
           +     PM +YCDNKATIS+AH+PVLHDRT+H E DKHF+KEKI   ++C+ Y+   +Q+
Sbjct: 451 KMIGSSPMKLYCDNKATISVAHNPVLHDRTKHVEVDKHFIKEKIDNRLVCMTYIPTEEQV 488

[Close]

BLAST of Cucsa.152680 vs. TrEMBL
Match: A5C243_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019561 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.4e-52
Identity = 141/378 (37.30%), Postives = 195/378 (51.59%), Query Frame = 1


Query: 91  PLQTIFLYHRLSNSHKAFTSKINHLFVRRNTQEALNDLNWKVAVMEEMNALKQNCTWDIV 150
           P+     Y +LS + +AFTS I  + V +N QEA     WK AV EE+ AL++N TW+I 
Sbjct: 296 PIGNFISYDKLSPTFRAFTSSITEIQVPQNIQEAFKYPKWKAAVDEEVRALEKNGTWEIT 355

Query: 151 ELPKNKKTVGS----------------------------DGSIERYEVRLVAKKFTLTYG 210
           +LP+ KK VG                                 ER+    V K +     
Sbjct: 356 DLPRGKKPVGCKWIFTVKYKADGNVDRLRKSLYGLKQSPRAWFERFTK--VVKGYGFVQC 415

Query: 211 VDYQEIFA---PVAEINSI-----RILLHVAQSQAMDLVKVKSIVLCSINIQEMTRLC-- 270
                +F    P  ++  I      I+L     + +DL+K   ++     I+++  L   
Sbjct: 416 QSDHTLFVKHFPEGKLAIIIVYVDDIILTGDHEEKIDLLK--KLLTKEFEIKDLGNLKYF 475

Query: 271 --MEFTRSRSGILVNRRKYIFYLRKEIGLLGCRVVETPIKQNLKLEVVEKEIK-EKEKYQ 330
             ME  RS+ GI V++RKY+  L  E G+LGC+  ETP+   +KLE  +     +K +YQ
Sbjct: 476 LGMEIARSKKGIAVSQRKYVLDLLNETGMLGCKPAETPMDTTVKLEESDGSAPVDKGRYQ 535

Query: 331 RFVGRLTYLDHTRPDIAFASMVA----------------------SSAEAEFKASTHGIC 390
           R VG+L YL HTRPDI F+  VA                      SSAEAEF+A   GIC
Sbjct: 536 RLVGKLIYLSHTRPDIGFSVSVAIVHLFWGNLVTWRSKKQSVVARSSAEAEFRAMAQGIC 595

Query: 391 KGIWIRRLLEELRFSQKMPMLIYCDNKATISIAHSPVLHDRTEHSEGDKHFMKEKIVQGI 406
           +GIW+ RLLEELR   K PM++YCDN+A ISIA +PV HDRT+H E D+HF+KEKI +G+
Sbjct: 596 EGIWLNRLLEELRVPLKHPMVLYCDNQAAISIAKNPVHHDRTKHVEIDRHFIKEKIEEGV 655

[Close]

BLAST of Cucsa.152680 vs. TrEMBL
Match: A5C243_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019561 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 7.6e-11
Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 1


Query: 21  QNDVVERKNRYLLEVACALMLSMHVPKYLCGDAVLTAAYLINQMPTKILNFKTP----LS 80
           QN + ERKNR+LLEVA +LM SM+VPK   G AVLTAAYLIN+MP+++L F+TP    L 
Sbjct: 47  QNGIAERKNRHLLEVARSLMFSMNVPKLFWGQAVLTAAYLINRMPSRVLKFQTPCQTLLK 106

Query: 81  RFKTGKSPVKVP 89
            F T +    VP
Sbjct: 107 SFPTTRLISTVP 118

HSP 2 Score: 201.1 bits (510), Expect = 2.7e-48
Identity = 119/282 (42.20%), Postives = 170/282 (60.28%), Query Frame = 1


Query: 145 CTWDIVELPKNKKTVGSDGSIERYEVRLVAKKFTLTYGVDYQEIFAPVAEINSIRILLHV 204
           C W ++   K       DGSI+R++ +LVAK FT +YG+DY+E FA VA++N+   +L  
Sbjct: 15  CKWILIVKYKE------DGSIDRFKAQLVAKGFTQSYGIDYEETFALVAKLNTEINILKD 74

Query: 205 AQSQAMDLVKVKSIVLCSINIQEMTRLCMEFTRSRSGILVNRRKYIFYLRKEIGLLGCRV 264
             ++  ++  V S+            L ME  RS++GILV++RK +  L KE  +L C+ 
Sbjct: 75  LLAKEFEIKAVGSLKYF---------LGMEIARSKAGILVSQRKCVMDLLKETRMLRCKP 134

Query: 265 VETPIKQNLKLEVVEKEIK-EKEKYQRFVGRLTYLDHTRPDIAFA-SMVA---------- 324
            +TP+    KL   E+    +K +YQR VG+L YL HTRPDI F+ SMV+          
Sbjct: 135 TDTPMDSTTKLGTKEESAPVDKGRYQRLVGKLIYLSHTRPDIGFSISMVSQFMNNPNEEH 194

Query: 325 ---------SSAEAEFKASTHGICKGIWIRRLLEELRFSQKMPMLIYCDNKATISIAHSP 384
                    SSAEAEF+A  HGIC+ +W+RRLL+ELR   + PM ++CDN++ ISIA +P
Sbjct: 195 IEAVYRILRSSAEAEFRAMAHGICEEMWLRRLLKELRIMIEEPMKMFCDNQSAISIAKNP 254

Query: 385 VLHDRTEHSEGDKHFMKEKIVQGIICIPYLLRTKQIANVLTK 406
           V HDRT+H E D+HF+KEKI  G+I + +L    Q A +LTK
Sbjct: 255 VHHDRTKHVEIDRHFIKEKIEGGVIKLLHLPTCLQTAGILTK 281

[Close]

BLAST of Cucsa.152680 vs. TrEMBL
Match: A0A151RBW0_CAJCA (Copia protein (Fragment) OS=Cajanus cajan GN=KK1_038711 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.5e-48
Identity = 124/306 (40.52%), Postives = 172/306 (56.21%), Query Frame = 1


Query: 21  QNDVVERKNRYLLEVACALMLSMHVPKYLCGDAVLTAAYLINQMPTKILNFKTPLSRFKT 80
           QN + ERKN +LL+   AL+   +VPK   G+AVLTA YLIN++P+ IL+ K+P+   K+
Sbjct: 50  QNGIAERKNGHLLDQTRALIFQNNVPKIFWGEAVLTATYLINRLPSTILSSKSPMEVLKS 109

Query: 81  GKSPVKVPNIPLQTIFLYHRLSNSHKAFTSKINHLFVRRNTQEALNDLNWKVAVMEEMNA 140
               +   N     IF      + H     K+          +AL D NWK A+  EM A
Sbjct: 110 FYPHITHTNNHQPRIFGCVSFVHVHSNGRGKL----------DALIDKNWKQAMELEMEA 169

Query: 141 LKQNCTWDIVELPKNKKTVG----------SDGSIERYEVRLVAKKFTLTYGVDYQEIFA 200
           L++N TW +V LP  KK VG          +DG+IERY+ RLVAK FT TYGVDY E FA
Sbjct: 170 LEKNNTWKLVTLPPGKKPVGCKWVYTVKYRADGTIERYKARLVAKGFTQTYGVDYLETFA 229

Query: 201 PVAEINSIRILLH--VAQSQAMDLVKVKSIVLCSINIQEMTRLCMEFTRSRSGILVNRRK 260
           PVA++N++R++      + +   L K+K              L +E   S+ GI ++++K
Sbjct: 230 PVAKMNTVRVIFQCLAKEFEIKTLGKLKYF------------LGIEGAHSKKGIFISQQK 289

Query: 261 YIFYLRKEIGLLGCRVVETPIKQNLKLEVVEKEIK-EKEKYQRFVGRLTYLDHTRPDIAF 314
           YI  L KE G   C+   TP+  N+KL   E+++  +KE YQR VG+L YL HTRPDIAF
Sbjct: 290 YITDLLKETGKTACKPASTPVDPNIKLGSAEEDVAVDKEMYQRLVGKLIYLSHTRPDIAF 333

[Close]

BLAST of Cucsa.152680 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-13
Identity = 41/118 (34.75%), Postives = 66/118 (55.93%), Query Frame = 1


Query: 98  YHRLSNSHKAFTSKINHLFVRRNTQEALNDLNWKVAVMEEMNALKQNCTWDIVELPKNKK 157
           Y ++S  + +F   I          EA   L W  A+ +E+ A++   TW+I  LP NKK
Sbjct: 66  YEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKK 125

Query: 158 TVG----------SDGSIERYEVRLVAKKFTLTYGVDYQEIFAPVAEINSIRILLHVA 206
            +G          SDG+IERY+ RLVAK +T   G+D+ E F+PV ++ S++++L ++
Sbjct: 126 PIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAIS 183

HSP 2 Score: 63.2 bits (152), Expect = 4.4e-10
Identity = 29/72 (40.28%), Postives = 45/72 (62.50%), Query Frame = 1


Query: 313 SSAEAEFKASTHGICKGIWIRRLLEELRFSQKMPMLIYCDNKATISIAHSPVLHDRTEHS 372
           SSAEAE++A +    + +W+ +   EL+     P L++CDN A I IA + V H+RT+H 
Sbjct: 485 SSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHI 544

Query: 373 EGDKHFMKEKIV 385
           E D H ++E+ V
Sbjct: 545 ESDCHSVRERSV 556

HSP 3 Score: 54.7 bits (130), Expect = 1.6e-07
Identity = 41/139 (29.50%), Postives = 65/139 (46.76%), Query Frame = 1


Query: 212 LVKVKSIVLCSIN------IQEMTRLC--------------MEFTRSRSGILVNRRKYIF 271
           LV V  I++CS N      ++   + C              +E  RS +GI + +RKY  
Sbjct: 281 LVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYAL 340

Query: 272 YLRKEIGLLGCRVVETPIKQNLKLEVVE-KEIKEKEKYQRFVGRLTYLDHTRPDIAFA-S 329
            L  E GLLGC+    P+  ++        +  + + Y+R +GRL YL  TR DI+FA +
Sbjct: 341 DLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVN 400

[Close]

BLAST of Cucsa.152680 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-10
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 1


Query: 124 ALNDLNWKVAVMEEMNALKQNCTWDIVELPKNKKTVG----------SDGSIERYEVRLV 183
           AL D  W  A+ EE++AL +N TW +V  P N+  +G          SDG+++R + RLV
Sbjct: 34  ALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLV 93

Query: 184 AKKFTLTYGVDYQEIFAPVAEINSIRILLHVAQ 207
           AK F    G+ + E ++PV    +IR +L+VAQ
Sbjct: 94  AKGFHQEEGIYFVETYSPVVRTATIRTILNVAQ 126

[Close]

BLAST of Cucsa.152680 vs. NCBI nr
Match: gi|703092620|ref|XP_010094679.1| (E3 ubiquitin-protein ligase listerin [Morus notabilis])

HSP 1 Score: 224.6 bits (571), Expect = 3.2e-55
Identity = 135/292 (46.23%), Postives = 178/292 (60.96%), Query Frame = 1


Query: 138 MNALKQNCTWDIVELPKNKKTVG----------SDGSIERYEVRLVAKKFTLTYGVDYQE 197
           MN LK++ T  I +LP+ KKTVG          +DGS+ERY+ RL+AK FT TYG+DYQE
Sbjct: 1   MNTLKKSGTRVIEDLPRGKKTVGCKWVFTVKCKADGSVERYKARLMAKGFTQTYGLDYQE 60

Query: 198 IFAPVAEINSIRILLHVAQSQAMDLVK--VKSIVLCSINIQEMTRLCME--FTRSRSGIL 257
            FAPVA+INSIR+LL +A +    L +  VK+  L   N++E   + +   F +  S   
Sbjct: 61  TFAPVAKINSIRVLLSLAVNSNWPLYQLDVKNAFLNG-NLEEEVFMSLPPGFEKFFSQDK 120

Query: 258 VNRRKYIFYLRKEIGLLGCRVVETPIKQNLKLEVVEKE-IKEKEKYQRFVGRLTYLDHTR 317
           V R K   Y        GC+  ETPI+ NLKL   + E + ++EK+QR VG+L YL HTR
Sbjct: 121 VCRLKKSLY--------GCKTAETPIEANLKLTPAKPEDVIDREKFQRLVGKLIYLSHTR 180

Query: 318 PDIAFA----------------SMVASSAEAEFKASTHGICKGIWIRRLLEELRFSQKMP 377
            DIAFA                  + SSA+AEF+   HGIC+ IWI+RL ++L  S  +P
Sbjct: 181 LDIAFAVSVMRIGQEARLIDDQKAIRSSAKAEFRFLAHGICEVIWIKRLFKDLNISVPLP 240

Query: 378 MLIYCDNKATISIAHSPVLHDRTEHSEGDKHFMKEKIVQGIICIPYLLRTKQ 399
           + +YCDNKA  SIAH+PVLHDRT+H E DKHF+KE I  G+IC+ Y   T Q
Sbjct: 241 IKVYCDNKAASSIAHNPVLHDRTKHIEVDKHFIKENIESGLICVSYAAFTAQ 283

[Close]

BLAST of Cucsa.152680 vs. NCBI nr
Match: gi|147777967|emb|CAN65132.1| (hypothetical protein VITISV_018707 [Vitis vinifera])

HSP 1 Score: 222.6 bits (566), Expect = 1.2e-54
Identity = 148/366 (40.44%), Postives = 211/366 (57.65%), Query Frame = 1


Query: 65  PTKILNFKTPLSRFKTGKSPVKVPNIPLQTIFLYHRLSNSHKAFTSKINHLFVRRNTQEA 124
           PT+ L+   P++  K  ++  K P   +     Y  L  +++AFT+ I+ L V RN QEA
Sbjct: 151 PTQDLDLDLPIALRKGTRACTKYP---IAEYISYSNLFENYRAFTTNISKLMVPRNIQEA 210

Query: 125 LNDLNWKVAVMEEMNALKQNCTWDIVELPKNKKTVGSDGSIERYEVRLVAKKFTLTYGVD 184
           L++L WK+AV EEMNALK+N TW+             DGS+ERY+ R VAK FT TYG+D
Sbjct: 211 LDELIWKLAVFEEMNALKKNGTWESKV----------DGSVERYKARFVAKGFTQTYGID 270

Query: 185 YQEIFAPVAEINSIRILLH--VAQSQAMDLVKVKSIVLCSINIQEMTRLCMEFTRSRSGI 244
           YQE F PVA+INSIR+LL   V  +  +  + VK+  L +++++E   + M     +  I
Sbjct: 271 YQETFTPVAKINSIRVLLSLVVNSNWVLHQLDVKNTFL-NVDLEE--EVFMSPPPGKVAI 330

Query: 245 LVNRRKYIFYLRKEIGLLG--CRVVETPIKQNLKLEVVEK-EIKEKEKYQRFVG------ 304
           L+    Y+     +I L+G  C  +E      LK ++VE+ EIK+    + F+G      
Sbjct: 331 LI---AYV----DDIVLIGDDCNELE-----KLKGKLVEEFEIKDMGALKYFLGMKFSRS 390

Query: 305 --------RLTYLDHTRPDIAF------ASMVASSAEAEFKASTHGICKGIWIRRLLEEL 364
                   R   LD T  ++          +V SSAE +F+   HGIC  +WIRRL EEL
Sbjct: 391 KEGIFVNQRKYVLDETXGNLVTWRSKKQNMVVRSSAEDKFRVVAHGICDIMWIRRLPEEL 450

Query: 365 RFSQKMPMLIYCDNKATISIAHSPVLHDRTEHSEGDKHFMKEKIVQGIICIPYLLRTKQI 406
           +     PM +YCDNKATIS+AH+PVLHDRT+H E DKHF+KEKI   ++C+ Y+   +Q+
Sbjct: 451 KMIGSSPMKLYCDNKATISVAHNPVLHDRTKHVEVDKHFIKEKIDNRLVCMTYIPTEEQV 488

[Close]

BLAST of Cucsa.152680 vs. NCBI nr
Match: gi|147782985|emb|CAN62019.1| (hypothetical protein VITISV_019561 [Vitis vinifera])

HSP 1 Score: 215.3 bits (547), Expect = 2.0e-52
Identity = 141/378 (37.30%), Postives = 195/378 (51.59%), Query Frame = 1


Query: 91  PLQTIFLYHRLSNSHKAFTSKINHLFVRRNTQEALNDLNWKVAVMEEMNALKQNCTWDIV 150
           P+     Y +LS + +AFTS I  + V +N QEA     WK AV EE+ AL++N TW+I 
Sbjct: 296 PIGNFISYDKLSPTFRAFTSSITEIQVPQNIQEAFKYPKWKAAVDEEVRALEKNGTWEIT 355

Query: 151 ELPKNKKTVGS----------------------------DGSIERYEVRLVAKKFTLTYG 210
           +LP+ KK VG                                 ER+    V K +     
Sbjct: 356 DLPRGKKPVGCKWIFTVKYKADGNVDRLRKSLYGLKQSPRAWFERFTK--VVKGYGFVQC 415

Query: 211 VDYQEIFA---PVAEINSI-----RILLHVAQSQAMDLVKVKSIVLCSINIQEMTRLC-- 270
                +F    P  ++  I      I+L     + +DL+K   ++     I+++  L   
Sbjct: 416 QSDHTLFVKHFPEGKLAIIIVYVDDIILTGDHEEKIDLLK--KLLTKEFEIKDLGNLKYF 475

Query: 271 --MEFTRSRSGILVNRRKYIFYLRKEIGLLGCRVVETPIKQNLKLEVVEKEIK-EKEKYQ 330
             ME  RS+ GI V++RKY+  L  E G+LGC+  ETP+   +KLE  +     +K +YQ
Sbjct: 476 LGMEIARSKKGIAVSQRKYVLDLLNETGMLGCKPAETPMDTTVKLEESDGSAPVDKGRYQ 535

Query: 331 RFVGRLTYLDHTRPDIAFASMVA----------------------SSAEAEFKASTHGIC 390
           R VG+L YL HTRPDI F+  VA                      SSAEAEF+A   GIC
Sbjct: 536 RLVGKLIYLSHTRPDIGFSVSVAIVHLFWGNLVTWRSKKQSVVARSSAEAEFRAMAQGIC 595

Query: 391 KGIWIRRLLEELRFSQKMPMLIYCDNKATISIAHSPVLHDRTEHSEGDKHFMKEKIVQGI 406
           +GIW+ RLLEELR   K PM++YCDN+A ISIA +PV HDRT+H E D+HF+KEKI +G+
Sbjct: 596 EGIWLNRLLEELRVPLKHPMVLYCDNQAAISIAKNPVHHDRTKHVEIDRHFIKEKIEEGV 655

[Close]

BLAST of Cucsa.152680 vs. NCBI nr
Match: gi|147782985|emb|CAN62019.1| (hypothetical protein VITISV_019561 [Vitis vinifera])

HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10
Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 1


Query: 21  QNDVVERKNRYLLEVACALMLSMHVPKYLCGDAVLTAAYLINQMPTKILNFKTP----LS 80
           QN + ERKNR+LLEVA +LM SM+VPK   G AVLTAAYLIN+MP+++L F+TP    L 
Sbjct: 47  QNGIAERKNRHLLEVARSLMFSMNVPKLFWGQAVLTAAYLINRMPSRVLKFQTPCQTLLK 106

Query: 81  RFKTGKSPVKVP 89
            F T +    VP
Sbjct: 107 SFPTTRLISTVP 118

HSP 2 Score: 201.1 bits (510), Expect = 3.8e-48
Identity = 119/282 (42.20%), Postives = 170/282 (60.28%), Query Frame = 1


Query: 145 CTWDIVELPKNKKTVGSDGSIERYEVRLVAKKFTLTYGVDYQEIFAPVAEINSIRILLHV 204
           C W ++   K       DGSI+R++ +LVAK FT +YG+DY+E FA VA++N+   +L  
Sbjct: 15  CKWILIVKYKE------DGSIDRFKAQLVAKGFTQSYGIDYEETFALVAKLNTEINILKD 74

Query: 205 AQSQAMDLVKVKSIVLCSINIQEMTRLCMEFTRSRSGILVNRRKYIFYLRKEIGLLGCRV 264
             ++  ++  V S+            L ME  RS++GILV++RK +  L KE  +L C+ 
Sbjct: 75  LLAKEFEIKAVGSLKYF---------LGMEIARSKAGILVSQRKCVMDLLKETRMLRCKP 134

Query: 265 VETPIKQNLKLEVVEKEIK-EKEKYQRFVGRLTYLDHTRPDIAFA-SMVA---------- 324
            +TP+    KL   E+    +K +YQR VG+L YL HTRPDI F+ SMV+          
Sbjct: 135 TDTPMDSTTKLGTKEESAPVDKGRYQRLVGKLIYLSHTRPDIGFSISMVSQFMNNPNEEH 194

Query: 325 ---------SSAEAEFKASTHGICKGIWIRRLLEELRFSQKMPMLIYCDNKATISIAHSP 384
                    SSAEAEF+A  HGIC+ +W+RRLL+ELR   + PM ++CDN++ ISIA +P
Sbjct: 195 IEAVYRILRSSAEAEFRAMAHGICEEMWLRRLLKELRIMIEEPMKMFCDNQSAISIAKNP 254

Query: 385 VLHDRTEHSEGDKHFMKEKIVQGIICIPYLLRTKQIANVLTK 406
           V HDRT+H E D+HF+KEKI  G+I + +L    Q A +LTK
Sbjct: 255 VHHDRTKHVEIDRHFIKEKIEGGVIKLLHLPTCLQTAGILTK 281

[Close]

BLAST of Cucsa.152680 vs. NCBI nr
Match: gi|1012328323|gb|KYP39973.1| (Copia protein, partial [Cajanus cajan])

HSP 1 Score: 200.7 bits (509), Expect = 5.0e-48
Identity = 124/306 (40.52%), Postives = 172/306 (56.21%), Query Frame = 1


Query: 21  QNDVVERKNRYLLEVACALMLSMHVPKYLCGDAVLTAAYLINQMPTKILNFKTPLSRFKT 80
           QN + ERKN +LL+   AL+   +VPK   G+AVLTA YLIN++P+ IL+ K+P+   K+
Sbjct: 50  QNGIAERKNGHLLDQTRALIFQNNVPKIFWGEAVLTATYLINRLPSTILSSKSPMEVLKS 109

Query: 81  GKSPVKVPNIPLQTIFLYHRLSNSHKAFTSKINHLFVRRNTQEALNDLNWKVAVMEEMNA 140
               +   N     IF      + H     K+          +AL D NWK A+  EM A
Sbjct: 110 FYPHITHTNNHQPRIFGCVSFVHVHSNGRGKL----------DALIDKNWKQAMELEMEA 169

Query: 141 LKQNCTWDIVELPKNKKTVG----------SDGSIERYEVRLVAKKFTLTYGVDYQEIFA 200
           L++N TW +V LP  KK VG          +DG+IERY+ RLVAK FT TYGVDY E FA
Sbjct: 170 LEKNNTWKLVTLPPGKKPVGCKWVYTVKYRADGTIERYKARLVAKGFTQTYGVDYLETFA 229

Query: 201 PVAEINSIRILLH--VAQSQAMDLVKVKSIVLCSINIQEMTRLCMEFTRSRSGILVNRRK 260
           PVA++N++R++      + +   L K+K              L +E   S+ GI ++++K
Sbjct: 230 PVAKMNTVRVIFQCLAKEFEIKTLGKLKYF------------LGIEGAHSKKGIFISQQK 289

Query: 261 YIFYLRKEIGLLGCRVVETPIKQNLKLEVVEKEIK-EKEKYQRFVGRLTYLDHTRPDIAF 314
           YI  L KE G   C+   TP+  N+KL   E+++  +KE YQR VG+L YL HTRPDIAF
Sbjct: 290 YITDLLKETGKTACKPASTPVDPNIKLGSAEEDVAVDKEMYQRLVGKLIYLSHTRPDIAF 333

The following BLAST results are available for this feature:

BLAST of Cucsa.152680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COPIA_DROME	2.0e-12	35.05	Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3	[more]
M820_ARATH	2.7e-09	38.71	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg0...	[more]
POLX_TOBAC	6.0e-09	37.78	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cucsa.152680 vs. TrEMBL


Match Name	E-value	Identity	Description
W9RJF7_9ROSA	2.2e-55	46.23	E3 ubiquitin-protein ligase listerin OS=Morus notabilis GN=L484_003308 PE=4 SV=1	[more]
A5B0T2_VITVI	8.5e-55	40.44	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018707 PE=4 SV=1	[more]
A5C243_VITVI	1.4e-52	37.30	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019561 PE=4 SV=1	[more]
A5C243_VITVI	7.6e-11	56.94	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019561 PE=4 SV=1	[more]
A0A151RBW0_CAJCA	3.5e-48	40.52	Copia protein (Fragment) OS=Cajanus cajan GN=KK1_038711 PE=4 SV=1	[more]

BLAST of Cucsa.152680 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23160.1	3.2e-13	34.75	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	1.5e-10	38.71	ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

BLAST of Cucsa.152680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|703092620\|ref\|XP_010094679.1\|	3.2e-55	46.23	E3 ubiquitin-protein ligase listerin [Morus notabilis]	[more]
gi\|147777967\|emb\|CAN65132.1\|	1.2e-54	40.44	hypothetical protein VITISV_018707 [Vitis vinifera]	[more]
gi\|147782985\|emb\|CAN62019.1\|	2.0e-52	37.30	hypothetical protein VITISV_019561 [Vitis vinifera]	[more]
gi\|147782985\|emb\|CAN62019.1\|	1.1e-10	56.94	hypothetical protein VITISV_019561 [Vitis vinifera]	[more]
gi\|1012328323\|gb\|KYP39973.1\|	5.0e-48	40.52	Copia protein, partial [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR013103	RVT_2

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0043167	ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.152680.1	Cucsa.152680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 20..76 score: 8.7
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 144..214 score: 1.3
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 26..345 score: 1.3
None	No IPR available	PANTHER	PTHR11439:SF185	SUBFAMILY NOT NAMED	coord: 26..345 score: 1.3
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 239..370 score: 1.

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.152680	Silver-seed gourd	carcgyB0580
Cucsa.152680	Cucumber (Chinese Long) v3	cgycucB232
Cucsa.152680	Watermelon (97103) v2	cgywmbB259
Cucsa.152680	Wax gourd	cgywgoB298
Cucsa.152680	Cucurbita maxima (Rimu)	cgycmaB0424
Cucsa.152680	Cucurbita maxima (Rimu)	cgycmaB0423
Cucsa.152680	Cucurbita moschata (Rifu)	cgycmoB0423
Cucsa.152680	Cucurbita moschata (Rifu)	cgycmoB0424
Cucsa.152680	Wild cucumber (PI 183967)	cgycpiB225
Cucsa.152680	Cucumber (Chinese Long) v2	cgycuB220
Cucsa.152680	Melon (DHL92) v3.5.1	cgymeB257
Cucsa.152680	Watermelon (Charleston Gray)	cgywcgB258
Cucsa.152680	Watermelon (97103) v1	cgywmB272
Cucsa.152680	Cucurbita pepo (Zucchini)	cgycpeB0409
Cucsa.152680	Cucurbita pepo (Zucchini)	cgycpeB0410
Cucsa.152680	Bottle gourd (USVL1VR-Ls)	cgylsiB245
Cucsa.152680	Melon (DHL92) v3.6.1	cgymedB255