Cucsa.152010 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.152010
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptiontRNA pseudouridine synthase
Locationscaffold01119 : 303346 .. 306884 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAAAATTAACCTCATAAAGTTTTGGTGTATAGCAATCGAACAAGAATTGGAAGATGCAATATATAAAGCTGGTGGAATTTGTGATAGCAACTATGGAAATCTGAACAAAATCTCATGGGCAAGGAGTAGCCGCACTGATAAAGGAGTAAATATCTTGAATGTCTTAGTACCTCATTTTATGACTTCTATAAACTTATTGGTTGTTTTGAATTGTTATTTCATCTCTTTCTAATTCAAGGTTCATTCTTTGGCTACAACAATAACCTTAAAAATGGAAATCCCTGGAAGTGCATGGATAGACGACCCTTGTGGTATTTCACTTGCTGATTACATCAACTCTTATCTTCCTGATAATATCAAGGTTTTTGGCATTGTACCTGCACAGAAGTGAGTGTTCTGAGGTTTTTTCATTGGTGCTTTTTAAGTGAGTAAATGAAGTGTTAGCACTAGCATGATACACTTTTACGCATAAACTACAAAGTGGTAACATTGCATCAATTTTGTTACTTGTCAAGGAGGTTTGATCCTAGAAAGGAGTGTGATGTTCGGATGTATTCGTATCTCCTCCCTGCTAAGCTTATTGGAATTGAAAGTAAACTTAAAACTACTGAAATTGATTGCCACATCTCAGACTTTAAAGATATATTAAAATCCTTTGAGGTACGTTATGATCTCCTTCAATTAATTACATACGCATCATATTGCCCCTTCCTTCACTGCAAGAAACATGATTTGTTATTTGATACAGTATAGTGCTGTTATTTGGGAAGACAATTATATGTCGTTGAAGAACAAAGGTGAATTCTTTTTGGCCACAGGGGGACCATCCTTTTCATAATTATACAGTACGCTCCATTTATAGAACGAGAATTCGAGCCAAGCAACTAGTATATGCCCTTAAGTCAGGCAAGAAGGTATCACCCGGTGATATGTCAAACTCTGAGTTTGAGGGAAGTGATCAAGAAAATGATACTTTTGTTGAAGGAATCAAGGAACCAGATCAACGTTCTCCAAGCTTAAGCGTCTGTGAAAATCTAACTGAAGTATGCAGTAAACTTGAAGATGGATCAGAACTTCTGAAGGGTGTTCGTGCAAGATGGCTTCATGAGCCAGATGAGAAAGATCGTATAGGCGCCTCACACTTCAGAAGGATTCTTTACTGTTCTTGTGGGAAGCTGGAAACATATTTtGGATGTGATTTCATTGAGATATCCATTTGGGGAgAATCATTCATGTTGCATCAAGTTAGTCTTTCTCTAACATTGTTTTTATGGTACATAATTTGTTCTCATCCATTTTCATTCCAATTTGTAAGTTAATCTATATTTACTCCATTTATTCTTGATTTCAGTTGGTAGCTCTATTGCTTAGATAGGTTTTCCGTTGTAATGCCTCCGGTAGCTTATATCTTGCTTCTGGCCATGTGGGAGCCAAATTTTGGTTTTATAACTGTACTTTGGTGCTCACTCGACAACTTTTTTGCTGCATTATTTCACTTTTTAGACTCTTTTCCCTCTTTGGAAATCAATGCTGGCTTAATGGACTTTTTCCTGTGCTAGTAGTCCAAAAAaTTAAGAAATAGCTATGGGTTTATGTTTtAGGAAATTAAATTAAATTCTAAAATATTACCATCGATTAAATAATTTGATGGTCCTATCCATTCCTGGACGAAAGATAGTAGTTAATGGGTTCAAGTTTTATGAGCTTGACTTGTTCAATATCTACCATTATAACCTTCATTTACTTCCTGAGGTTATAAATTTGTAGGATCAGCATGGTCCCTGTGCATTGGTGGACAGAAGATATGAGTTGATGAGTTCAAGCTTTATGAGCTTGACTTGTTAACTATATACCATCATAACCTTCATTTACTCCCTAAGGTTCATAATTCATGAGTTCAAGCTTTATGAGAAACTAGAATCTATTATTAAGTTTAGGAATTGGAAGGAGAGTGGGAGGTGAAAAGGTGTCAGGCTTTCTTTTGGCAGATTTCTCATTTCCATTCTTTTTGTAACTTTTGAGCTGATAATATGATGTTTTCTTATTAAAAAaGAACATCAATAACATATCTTATGAACAATGAAGTTGTTTTCATTAGTAATTAATAAAGGGTAGTTAATGTTCTAGTTTTAAAACGAAAGGACCATTCTGATGCAACTTTTATTACATCCTTGGCAGATTCGGAAAATGATAGCAACGGCTGTGGCAGTGAAGCGGAAACTTCTCCCAAGAGATATTATAACATTGTCACTGACCAAGTTTTCTAGAATAGTTTTACCCATTGCTCCAGCTGAGGTCTTAGTCCTAAGAGGGAACAGTTTTTCCAACAGAAAACGGCCAGGAGCTCCAATGAGGTCAGAGTTGTTCACACTGAATGAATCAGATGACATAGTCAATTCAGTGAATGAATTCTACAGATCAGCGATATTGCCCGAGGTAACTAAGTTCCTGGACACAGAAAGCCCCCCATGGAAAGAATGGGTGGAGAAATTGGACAAGTACACAAGCATTCCGAATGAAGAATTGGATGAAGTTAGGAGTGCTTGGAAAGCATGGAAGTACAGGGAACATTGATCTGATCATGAGAAATCAAGATGGCCTTTGAATTATGTTGATGTGTTTTTTtGTCTGCCCCTCTGTTGTTGGAAGTCGTCAAAAACTTGAATGTTGAAGAAGGATGGGAAGCAGTTGAGTTTGAGTTAGGAGAGTTATTAATGGCATAAATTATGGGAATTGGGCATTGAATGGACGTGGTCTGTGGCCACCCACCAGCCGGGGGgCGTTTTAATAAGCTCAGCATCAACTGCAGACAATCAACTGGGGAATTGGCACAAGCCACAAGGGAGTGAGCTCACATTCAATGTAAATGGCTTAAAAGGCGAAATATGTAGGTGAGCCTTTGACACAGGGCTGTACTGATGTTGATTCAACTTCATTTCTGATGGAAATTTGGATCTAAACTTTGACTAATACCCATTATGAACATTTCATGTTGCTTTCCCTCTTAATTTACAATGATATACTGTTTATTGTTTTTTtGTTGTAGAATATGCATTTATTATCTTATGGTTGGTCTTTCATTAATCTTGGTAGAAAACCTCCCTTCAGAATGGAGTAATACATGTCTAGACAGTCTATCCAACCCCATTTCTTATCTAGTGCTTCTTTTTCAAAAAGCAATAAACAATAACTATATGGGGCTTTAACTAAGAAGACCTTATACCATATTACAAGATCATtTTTTTCTATATTTTTtCCTAAAATGACTTGTATATTACATAAAAAaTATGGACTAATTTACTAATCTATCCATTTTGATTAGTAATTAGATATTTAAATAAATAAAAAGGAAGGTGAATTGAAAATGTGATATTAGGAAGGTGGGTTATGGTTTAGGCAAATTCAAAAGTCAGAAGAGAACTTTCCTTCTTCGATAACGGTTAATTATTCCTTTTATTTTCTTCACTAAAGAAGCCGGATAGTAGAAGATTTGGAAAAACCTTCGCGGTAAAGAAGAAGACTTTCAACGACTAG

mRNA sequence

ATGCAGAAAATTAACCTCATAAAGTTTTGGTGTATAGCAATCGAACAAGAATTGGAAGATGCAATATATAAAGCTGGTGGAATTTGTGATAGCAACTATGGAAATCTGAACAAAATCTCATGGGCAAGGAGTAGCCGCACTGATAAAGGAGTTCATTCTTTGGCTACAACAATAACCTTAAAAATGGAAATCCCTGGAAGTGCATGGATAGACGACCCTTGTGGTATTTCACTTGCTGATTACATCAACTCTTATCTTCCTGATAATATCAAGGTTTTTGGCATTGTACCTGCACAGAAGAGGTTTGATCCTAGAAAGGAGTGTGATGTTCGGATGTATTCGTATCTCCTCCCTGCTAAGCTTATTGGAATTGAAAGTAAACTTAAAACTACTGAAATTGATTGCCACATCTCAGACTTTAAAGATATATTAAAATCCTTTGAGGTACGTTATGATCTCCTTCAATTAATTACATACGCATCATATTGCCCCTTCCTTCACTGCAAGAAACATGATTTGTTATTTGATACAGTGAATTCTTTTTGGCCACAGGGGGACCATCCTTTTCATAATTATACAGTACGCTCCATTTATAGAACGAGAATTCGAGCCAAGCAACTAGTATATGCCCTTAAGTCAGGCAAGAAGGTATCACCCGGTGATATGTCAAACTCTGAGTTTGAGGGAAGTGATCAAGAAAATGATACTTTTGTTGAAGGAATCAAGGAACCAGATCAACGTTCTCCAAGCTTAAGCGTCTGTGAAAATCTAACTGAAGGTGTTCGTGCAAGATGGCTTCATGAGCCAGATGAGAAAGATCGTATAGGCGCCTCACACTTCAGAAGGATTCTTTACTGTTCTTGTGGGAAGCTGGAAACATATTTTGGATGTGATTTCATTGAGATATCCATTTGGGGAGAATCATTCATGTTGCATCAAATTCGGAAAATGATAGCAACGGCTGTGGCAGTGAAGCGGAAACTTCTCCCAAGAGATATTATAACATTGTCACTGACCAAGTTTTCTAGAATAGTTTTACCCATTGCTCCAGCTGAGGTCTTAGTCCTAAGAGGGAACAGTTTTTCCAACAGAAAACGGCCAGGAGCTCCAATGAGGTCAGAGTTGTTCACACTGAATGAATCAGATGACATAGTCAATTCAGTGAATGAATTCTACAGATCAGCGATATTGCCCGAGGTAACTAAGTTCCTGGACACAGAAAGCCCCCCATGGAAAGAATGGGTGGAGAAATTGGACAAGTACACAAGCATTCCGAATGAAGAATTGGATGAAGTTAGGAGTGCTTGGAAAGCATGGAATAGAAGATTTGGAAAAACCTTCGCGGTAAAGAAGAAGACTTTCAACGACTAG

Coding sequence (CDS)

ATGCAGAAAATTAACCTCATAAAGTTTTGGTGTATAGCAATCGAACAAGAATTGGAAGATGCAATATATAAAGCTGGTGGAATTTGTGATAGCAACTATGGAAATCTGAACAAAATCTCATGGGCAAGGAGTAGCCGCACTGATAAAGGAGTTCATTCTTTGGCTACAACAATAACCTTAAAAATGGAAATCCCTGGAAGTGCATGGATAGACGACCCTTGTGGTATTTCACTTGCTGATTACATCAACTCTTATCTTCCTGATAATATCAAGGTTTTTGGCATTGTACCTGCACAGAAGAGGTTTGATCCTAGAAAGGAGTGTGATGTTCGGATGTATTCGTATCTCCTCCCTGCTAAGCTTATTGGAATTGAAAGTAAACTTAAAACTACTGAAATTGATTGCCACATCTCAGACTTTAAAGATATATTAAAATCCTTTGAGGTACGTTATGATCTCCTTCAATTAATTACATACGCATCATATTGCCCCTTCCTTCACTGCAAGAAACATGATTTGTTATTTGATACAGTGAATTCTTTTTGGCCACAGGGGGACCATCCTTTTCATAATTATACAGTACGCTCCATTTATAGAACGAGAATTCGAGCCAAGCAACTAGTATATGCCCTTAAGTCAGGCAAGAAGGTATCACCCGGTGATATGTCAAACTCTGAGTTTGAGGGAAGTGATCAAGAAAATGATACTTTTGTTGAAGGAATCAAGGAACCAGATCAACGTTCTCCAAGCTTAAGCGTCTGTGAAAATCTAACTGAAGGTGTTCGTGCAAGATGGCTTCATGAGCCAGATGAGAAAGATCGTATAGGCGCCTCACACTTCAGAAGGATTCTTTACTGTTCTTGTGGGAAGCTGGAAACATATTTtGGATGTGATTTCATTGAGATATCCATTTGGGGAgAATCATTCATGTTGCATCAAATTCGGAAAATGATAGCAACGGCTGTGGCAGTGAAGCGGAAACTTCTCCCAAGAGATATTATAACATTGTCACTGACCAAGTTTTCTAGAATAGTTTTACCCATTGCTCCAGCTGAGGTCTTAGTCCTAAGAGGGAACAGTTTTTCCAACAGAAAACGGCCAGGAGCTCCAATGAGGTCAGAGTTGTTCACACTGAATGAATCAGATGACATAGTCAATTCAGTGAATGAATTCTACAGATCAGCGATATTGCCCGAGGTAACTAAGTTCCTGGACACAGAAAGCCCCCCATGGAAAGAATGGGTGGAGAAATTGGACAAGTACACAAGCATTCCGAATGAAGAATTGGATGAAGTTAGGAGTGCTTGGAAAGCATGGAATAGAAGATTTGGAAAAACCTTCGCGGTAAAGAAGAAGACTTTCAACGACTAG

Protein sequence

MQKINLIKFWCIAIEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDPCGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTTEIDCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLLFDTVNSFWPQGDHPFHNYTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQENDTFVEGIKEPDQRSPSLSVCENLTEGVRARWLHEPDEKDRIGASHFRRILYCSCGKLETYFGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEWVEKLDKYTSIPNEELDEVRSAWKAWNRRFGKTFAVKKKTFND*
Homology
[Close]
BLAST of Cucsa.152010 vs. Swiss-Prot
Match: PUSH_ARATH (Putative tRNA pseudouridine synthase OS=Arabidopsis thaliana GN=At2g30320 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 9.1e-107
Identity = 211/443 (47.63%), Postives = 281/443 (63.43%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IE ELE AIYKAGGI DSNYG+L+KI WARSSRTDKGVHSLAT+I+LKMEIP +AW DDP
Sbjct: 91  IEGELEVAIYKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATSISLKMEIPETAWKDDP 150

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTTEI 133
            G  LA  I+ +LP+NI+VF ++P+ +RFDPR+EC +R YSYLLP  ++GI++   + EI
Sbjct: 151 QGTVLAKCISKHLPENIRVFSVLPSNRRFDPRRECTLRKYSYLLPVDVLGIKNSFTSDEI 210

Query: 134 DCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLLFDTVNSFWPQGDHPFHNYT 193
           D HI+DF +ILK FE  Y            PF +  +                     Y 
Sbjct: 211 DYHITDFNEILKEFEGEY------------PFHNYTQRS------------------RYR 270

Query: 194 VRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQENDTFVEGIKEPDQRSPSLSV 253
            +S  + + R  +     KS K         +  E  ++E +  V+G  +    +P    
Sbjct: 271 RKSEQKIKQRNGRPPREPKSIKASESEFREENHIEIGEEEEEKEVDGESDEHVVTPD--- 330

Query: 254 CENLTEGVRARWLHEPDEKDRIGASHFRRILYCSCGKLETYFGCDFIEISIWGESFMLHQ 313
            +N     RA+WL+EPDE D+I  +HFR++  C  GKLE   G  F+EISIWGESFMLHQ
Sbjct: 331 SDNSQVYSRAKWLYEPDETDKISGAHFRKVFRCRSGKLENSLGFGFVEISIWGESFMLHQ 390

Query: 314 IRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGAPMRS 373
           IRKMI TAVAVKR+LLPRDII LSL KF+RIVLP+AP+EVL+LRGNSF  R+ P  P   
Sbjct: 391 IRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFEVRRLPERP--- 450

Query: 374 ELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEWVEKLDKYTSIPNEELDEVR 433
            +    ES+++   + EFYR+ ++P+V+ FLD+E  PWKEWV+ LD+   + +EEL++VR
Sbjct: 451 GMEATGESEEVEKEIEEFYRAVMVPQVSIFLDSEKSPWKEWVDHLDRNDGLIDEELEDVR 495

Query: 434 SAWKAWNRRFGKTFAVKKKTFND 457
             W+ W  +  K +   KKT +D
Sbjct: 511 KGWEEW--KAAKPWMNLKKTEDD 495

[Close]
BLAST of Cucsa.152010 vs. Swiss-Prot
Match: PUS1_ASHGO (tRNA pseudouridine synthase 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PUS1 PE=3 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-13
Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IE EL +A  KAG I  +N  +L K  + R++RTDKGVH+    I+LK+       I+DP
Sbjct: 92  IEAELFEAFVKAGAISRANSTDLKKNGFMRAARTDKGVHAGGNVISLKL------IIEDP 151

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLP 119
              ++ D IN +LP  I+V+GI    K FD RK C  R Y YLLP
Sbjct: 152 ---AIKDKINEHLPPGIRVWGISRVNKAFDCRKLCGSRWYEYLLP 187


HSP 2 Score: 40.0 bits (92), Expect = 7.9e-02
Identity = 26/59 (44.07%), Postives = 35/59 (59.32%), Query Frame = 1 

Query: 298 DFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVL 357
           +++ I I G+SFMLHQIRKMI+ A  V R     + I  S     +I +P APA  L+L
Sbjct: 337 EWVSIKIHGQSFMLHQIRKMISMATLVARCNCSPERIAQSYGP-QKINIPKAPALGLLL 394

[Close]
BLAST of Cucsa.152010 vs. Swiss-Prot
Match: PUS1_KLULA (tRNA pseudouridine synthase 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PUS1 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.9e-13
Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IE+EL +A  +AG I  +N  +L K  + R++RTDKGVH+    I+LK+       I+DP
Sbjct: 124 IEKELFEAFVRAGAISKANSTDLKKNGFQRAARTDKGVHAGGNVISLKL------IIEDP 183

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPA-KLIG 124
               + + IN+ LPD I+V+ I    K FD RK C  R Y YLLP   LIG
Sbjct: 184 ---EVKEKINNELPDQIRVWDISRVNKAFDCRKMCSSRWYEYLLPTYSLIG 225


HSP 2 Score: 42.7 bits (99), Expect = 1.2e-02
Identity = 25/59 (42.37%), Postives = 37/59 (62.71%), Query Frame = 1 

Query: 298 DFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVL 357
           +++ I I G+SFMLHQIRKMI+ A  + R   P + I  +  +  +I +P APA  L+L
Sbjct: 368 EWVSIKIHGQSFMLHQIRKMISMATLITRCFSPLERIRQAYGQ-EKINIPKAPALGLLL 425

[Close]
BLAST of Cucsa.152010 vs. Swiss-Prot
Match: PUS1_YARLI (tRNA pseudouridine synthase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PUS1 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.8e-12
Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IE ++  A  KAG I  +N  +  K ++ R++RTDKGVH+    I+LKM I         
Sbjct: 110 IEGDIFQAFVKAGAISQNNADDPKKSAFMRAARTDKGVHAAGNVISLKMIIEDE------ 169

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLP 119
              ++ + INS+LP+ ++V+G+    K F+ RK C  R+Y YL+P
Sbjct: 170 ---NIVEKINSHLPEQLRVWGVSRTNKAFECRKLCSSRVYEYLMP 205


HSP 2 Score: 48.1 bits (113), Expect = 2.9e-04
Identity = 38/107 (35.51%), Postives = 58/107 (54.21%), Query Frame = 1 

Query: 296 GCDFIEISIWGESFMLHQIRKMIA-TAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVL 355
           G +++ I I G+SFMLHQIRKMI+  A++V+    P+ +I  +  K +RI +P APA  L
Sbjct: 355 GTEWVSIKIHGQSFMLHQIRKMISMVALSVRCNADPQKLIPQTFEK-ARINIPKAPALGL 414

Query: 356 VLRGNSFS--NRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPE 400
           +L    +   N+K  G   R  +   N +D I    ++F    I  E
Sbjct: 415 LLERPVYDSYNKKLQGEFGREGVHFDNWNDQIEAFKHKFIYDKIYAE 460

[Close]
BLAST of Cucsa.152010 vs. Swiss-Prot
Match: PUS1_CANGA (tRNA pseudouridine synthase 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=PUS1 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.5e-12
Identity = 47/111 (42.34%), Postives = 62/111 (55.86%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IE  L  A   AG I  +N  +L K ++ R++RTDKGVH+    I+LKM I      +DP
Sbjct: 112 IEAALFKAFVDAGAISKANSNDLKKNNFMRAARTDKGVHAGGNLISLKMII------EDP 171

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPA-KLIG 124
               + D IN+ LP+ I+++ I    K FD RK C  R Y YLLP   LIG
Sbjct: 172 ---EIMDKINANLPEGIRIWDIERVNKAFDCRKMCSSRWYEYLLPTYSLIG 213


HSP 2 Score: 42.7 bits (99), Expect = 1.2e-02
Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 1 

Query: 298 DFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVLR 357
           +++ I I G+SFMLHQIRKMI+ A  + R   P + I+ +     +I +P APA  L+L 
Sbjct: 357 EWVSIKIHGQSFMLHQIRKMISMATLIARCGTPVERISQAFGP-QKINIPKAPALGLLLE 416

Query: 358 GNSFSN 364
              F +
Sbjct: 417 APVFES 421

[Close]
BLAST of Cucsa.152010 vs. TrEMBL
Match: A0A0A0M0Z2_CUCSA (tRNA pseudouridine synthase OS=Cucumis sativus GN=Csa_1G533680 PE=3 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 5.2e-194
Identity = 363/461 (78.74%), Postives = 374/461 (81.13%), Query Frame = 1 

Query: 1   MQKINLIKFWCIAIEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITL 60
           MQKINLIKFWCIAIEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITL
Sbjct: 1   MQKINLIKFWCIAIEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITL 60

Query: 61  KMEIPGSAWIDDPCGISLADYINSYLPDNIKVFGIVPAQK------RFDPRKECDVRMYS 120
           KMEIPGSAWIDDPCGISLADYINSYLPDNIKVF             RFDPRK        
Sbjct: 61  KMEIPGSAWIDDPCGISLADYINSYLPDNIKVF------GIVPAQKRFDPRK-------- 120

Query: 121 YLLPAKLIGIESKLKTTEIDCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLL 180
                     + ++ +  +   +   +  LK+ E+                  C   D  
Sbjct: 121 --------ECDVRMYSYLLPAKLIGIESKLKTTEI-----------------DCHISDFK 180

Query: 181 FDTVNSFWPQGDHPFHNYTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQEN 240
            D + SF  +GDHPFHNYTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQEN
Sbjct: 181 -DILKSF--EGDHPFHNYTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQEN 240

Query: 241 DTFVEGIKEPDQRSPSLSVCENLTE-------------GVRARWLHEPDEKDRIGASHFR 300
           DTFVEGIKEPDQRSPSLSVCENLTE             GVRARWLHEPDEKDRIGASHFR
Sbjct: 241 DTFVEGIKEPDQRSPSLSVCENLTEVCSKLEDGSELLKGVRARWLHEPDEKDRIGASHFR 300

Query: 301 RILYCSCGKLETYFGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKF 360
           RILYCSCGKLETYFGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKF
Sbjct: 301 RILYCSCGKLETYFGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKF 360

Query: 361 SRIVLPIAPAEVLVLRGNSFSNRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVT 420
           SRIVLPIAPAEVLVLRGNSFSNRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVT
Sbjct: 361 SRIVLPIAPAEVLVLRGNSFSNRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVT 419

Query: 421 KFLDTESPPWKEWVEKLDKYTSIPNEELDEVRSAWKAWNRR 443
           KFLDTESPPWKEWVEKLDKYTSIPNEELDEVRSAWKAW  R
Sbjct: 421 KFLDTESPPWKEWVEKLDKYTSIPNEELDEVRSAWKAWKYR 419

[Close]
BLAST of Cucsa.152010 vs. TrEMBL
Match: B9I6V0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s15030g PE=4 SV=2)

HSP 1 Score: 441.8 bits (1135), Expect = 1.0e-120
Identity = 244/434 (56.22%), Postives = 298/434 (68.66%), Query Frame = 1 

Query: 12  IAIEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWID 71
           + IE ELE AIY+AGGI +SNYGNLNKISWARSSRTDKGVHSLATTIT+KMEIP +AW D
Sbjct: 102 LTIEGELERAIYEAGGIRESNYGNLNKISWARSSRTDKGVHSLATTITMKMEIPENAWKD 161

Query: 72  DPCGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTT 131
           D  G+ LA ++NSYLPD+I+V  I+PAQK FDPR+ECD+R YSYLLPA++IGI+S     
Sbjct: 162 DLYGMVLAKHVNSYLPDSIRVLSILPAQKSFDPRRECDIRKYSYLLPAEVIGIKSHFSMA 221

Query: 132 EIDCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLLFDTVNSFWPQGDHPFHN 191
           EID HISDF +IL +FE  +            PF     H+    TV S + +  +P  N
Sbjct: 222 EIDDHISDFNNILNAFEGDH------------PF-----HNY---TVRSKY-RRKYPTKN 281

Query: 192 YTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGS--DQENDTFVEGIKEPDQRSP 251
             V        RA+       SG + +  ++S +  E S  D   D     +K+     P
Sbjct: 282 GHVSK------RARSSWGTSASGSEENHVELSQNSLESSICDLNGDI----LKDQSSNLP 341

Query: 252 SLSVCENLTEGVRARWLHEPDEKDRIGASHFRRILYCSCGKLETYFGCDFIEISIWGESF 311
                      +RARWLHEPDE DRIGA+HFR+I  CSCGKLE   G DF+EISIWGESF
Sbjct: 342 -----------LRARWLHEPDETDRIGAAHFRKIFRCSCGKLEKSLGFDFVEISIWGESF 401

Query: 312 MLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGA 371
           MLHQIRKM+ TAVAVKRK+LPRD+I LSLTKFSRIVLP+AP+EVL+LRGN FS RK+ G 
Sbjct: 402 MLHQIRKMVGTAVAVKRKVLPRDLIMLSLTKFSRIVLPLAPSEVLILRGNDFSLRKKSGE 461

Query: 372 PMRSELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEWVEKLDKYTSIPNEEL 431
             R E+ T+ ES++I+ +VNEFY + +LP+V+KFLD   P WKEWVE LDKYTSIP+ +L
Sbjct: 462 GKRPEMETMVESEEILRAVNEFYSTMMLPQVSKFLDPCMPLWKEWVENLDKYTSIPDAQL 493

Query: 432 DEVRSAWKAWNRRF 444
           DEVR A K W   F
Sbjct: 522 DEVRIARKVWMENF 493

[Close]
BLAST of Cucsa.152010 vs. TrEMBL
Match: A0A067LBA9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17338 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.7e-120
Identity = 239/434 (55.07%), Postives = 285/434 (65.67%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IE+ELE AI+KAGGI DSNYGNL+KI+WARSSRTDKGVHSLAT IT+KMEIP +AW +DP
Sbjct: 99  IEEELERAIFKAGGILDSNYGNLHKIAWARSSRTDKGVHSLATMITMKMEIPENAWKEDP 158

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTTEI 133
            G++LA ++N YLPD I++F I+P+QK FDPR+ECD R YSYLLPA++IGI+S     EI
Sbjct: 159 NGLALAKHVNYYLPDTIRIFSILPSQKSFDPRRECDQRKYSYLLPAEIIGIKSHFSQAEI 218

Query: 134 DCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLLFDTVNSFWPQGDHPFHNYT 193
           D H+SDF DIL +FE  +        + Y       K   +     S   +         
Sbjct: 219 DFHLSDFNDILSAFEGEHPFHNYTVRSKYRKQFPASKTGQVLKRARSSGERSATESEKSD 278

Query: 194 VRSIYRTR--IRAKQLVYALKSGKKVSPGDMSNSEFEGSDQENDTFVEGIKEPDQRSPSL 253
               YRT   I   Q+    KS K         S F   DQE D         D+R+   
Sbjct: 279 EEENYRTDEVISLDQIESTQKSVK---------SSF--LDQEGDIL------KDKRA--- 338

Query: 254 SVCENLTEGVRARWLHEPDEKDRIGASHFRRILYCSCGKLETYFGCDFIEISIWGESFML 313
                    + ARWLHEPDE DRIGASHFR+I  CSCG+LE   G DF+EISIWGESFML
Sbjct: 339 ------NASILARWLHEPDETDRIGASHFRKIFCCSCGRLEKSRGFDFVEISIWGESFML 398

Query: 314 HQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGAPM 373
           HQIRKMI TAVAVKR LLPRDI+ LSL KFSRIVLP+AP EVL+LRGNSF  RKRP    
Sbjct: 399 HQIRKMIGTAVAVKRGLLPRDILILSLAKFSRIVLPLAPPEVLILRGNSFVLRKRPDKGS 458

Query: 374 RSELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEWVEKLDKYTSIPNEELDE 433
           R E+ T+ ES++I+  VNEFY + +LP+V+KFLD    PWKEWVE LD+YT IP E+L  
Sbjct: 459 RPEMLTIVESEEILKVVNEFYANIMLPQVSKFLDPNGFPWKEWVENLDEYTGIPAEQLVG 506

Query: 434 VRSAWKAWNRRFGK 446
           VRSAWK W   F K
Sbjct: 519 VRSAWKVWKENFQK 506

[Close]
BLAST of Cucsa.152010 vs. TrEMBL
Match: A5C2V2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034891 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 3.6e-118
Identity = 234/441 (53.06%), Postives = 297/441 (67.35%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IE ELE A++KAGGI DSNYGNL+KI W RSSRTDKGVHSLAT I+LKMEIP +AW +DP
Sbjct: 91  IEGELETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDP 150

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTTEI 133
            GI+LA+Y+N +LP+NIKVF I+P+Q+ FD R+ECD+R YSYLLPA++IGI+S    +EI
Sbjct: 151 NGIALANYVNFHLPNNIKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEI 210

Query: 134 DCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLLFDTVNSFWPQGDHPFHNYT 193
           D HI++F DIL +FE  +        + Y                   +P    P +   
Sbjct: 211 DHHIAEFNDILNTFEGEHPFQNYTIRSKY----------------RKQFPAKQSPGNGGV 270

Query: 194 VRSIYRTRIRAKQLVYALKSGKKVSPGD--------MSNSEFEGSDQ---ENDTFVEGIK 253
            R       RAK    A  S  +VS G+        +S+   EG +Q   E+ +FVE   
Sbjct: 271 FR-------RAKSSGEASTSEFEVSDGEENSGVNGVISSDYDEGENQNSSESTSFVEHPV 330

Query: 254 EPDQRSPSLSVCENLTEGVRARWLHEPDEKDRIGASHFRRILYCSCGKLETYFGCDFIEI 313
                +      ++    VRARWLH PDE+DRI ASHFR+I  CSCGKLE + G D++E+
Sbjct: 331 GSSNNNEKGLKEQSSKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVEL 390

Query: 314 SIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVLRGNSFS 373
           SI GESFMLHQIRKM+ TA+AVKR+LLPRDI+TLSLTKFSRIVLP+AP+EVL+LRGNSFS
Sbjct: 391 SICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFS 450

Query: 374 NRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEWVEKLDKYT 433
            RK+PG   R E+ TL ES++I+ SV+EFY S ILP+V+KFLD    PW +W+E L   +
Sbjct: 451 VRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENL-TLS 507

Query: 434 SIPNEELDEVRSAWKAWNRRF 444
           SIP  ELD+VR+AWK W   F
Sbjct: 511 SIPEAELDDVRTAWKLWKENF 507

[Close]
BLAST of Cucsa.152010 vs. TrEMBL
Match: A0A059AID4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03050 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 4.7e-118
Identity = 223/432 (51.62%), Postives = 302/432 (69.91%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           +E+ELE+AIYKAGGI +SN+GNLN+I+WARSSRTDKGVHSLATTI+LKMEIP  AW  DP
Sbjct: 105 VEEELENAIYKAGGILESNFGNLNRIAWARSSRTDKGVHSLATTISLKMEIPDDAWKGDP 164

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTTEI 133
            GI LA +IN+YLP++I+VF I+P+++RFDPR+EC++R YSYLLPA++IG++S   ++E+
Sbjct: 165 YGIHLASHINAYLPEDIRVFSILPSKRRFDPRRECNIRKYSYLLPAEIIGMKSNCTSSEV 224

Query: 134 DCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLLFDTVNSFWPQGDHPFHNYT 193
           D HISDF DIL +FE  +        + Y   L  KK        +      + PF    
Sbjct: 225 DHHISDFNDILNTFEGEHPFHNYTVRSKYRRKLPIKK-----SRKDRRSTMEEKPFD--- 284

Query: 194 VRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQENDTFVEGIKE------PDQR 253
                     A       +S + ++  +++N+  EG+D+       G+ E       ++R
Sbjct: 285 ----------AVSASEEEESDEALTENELANN-CEGTDEH--ALQGGLDENLIDFCQNRR 344

Query: 254 SPSLSVCENLTEGVRARWLHEPDEKDRIGASHFRRILYCSCGKLETYFGCDFIEISIWGE 313
           +   S   N    ++ARWLHEPD+KDRI +SHFR+IL+CSCGKLE   G  ++E+SIWGE
Sbjct: 345 NDLRSRSSN--NVIKARWLHEPDQKDRISSSHFRKILHCSCGKLENLLGSSYVELSIWGE 404

Query: 314 SFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRP 373
           SFMLHQIRKM+ TAVAVKR LLPRDI+TLSL KFSR+VLP+AP+EVL+LRGN++  RK P
Sbjct: 405 SFMLHQIRKMVGTAVAVKRDLLPRDILTLSLAKFSRVVLPLAPSEVLILRGNNYVTRKGP 464

Query: 374 GAPMRSELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEWVEKLDKYTSIPNE 433
               R EL    ES+ ++++V++FYRS +LP+V +FLD   PPWKEWVEKLD++T IP  
Sbjct: 465 IDVSRPELMAFVESEAVLSTVDKFYRSVMLPQVARFLDPSRPPWKEWVEKLDEHTPIPVT 513

Query: 434 ELDEVRSAWKAW 440
           +LDE+R+AW +W
Sbjct: 525 QLDELRAAWDSW 513

[Close]
BLAST of Cucsa.152010 vs. TAIR10
Match: AT2G30320.1 (AT2G30320.1 Pseudouridine synthase family protein)

HSP 1 Score: 388.7 bits (997), Expect = 5.1e-108
Identity = 211/443 (47.63%), Postives = 281/443 (63.43%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IE ELE AIYKAGGI DSNYG+L+KI WARSSRTDKGVHSLAT+I+LKMEIP +AW DDP
Sbjct: 91  IEGELEVAIYKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATSISLKMEIPETAWKDDP 150

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTTEI 133
            G  LA  I+ +LP+NI+VF ++P+ +RFDPR+EC +R YSYLLP  ++GI++   + EI
Sbjct: 151 QGTVLAKCISKHLPENIRVFSVLPSNRRFDPRRECTLRKYSYLLPVDVLGIKNSFTSDEI 210

Query: 134 DCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLLFDTVNSFWPQGDHPFHNYT 193
           D HI+DF +ILK FE  Y            PF +  +                     Y 
Sbjct: 211 DYHITDFNEILKEFEGEY------------PFHNYTQRS------------------RYR 270

Query: 194 VRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQENDTFVEGIKEPDQRSPSLSV 253
            +S  + + R  +     KS K         +  E  ++E +  V+G  +    +P    
Sbjct: 271 RKSEQKIKQRNGRPPREPKSIKASESEFREENHIEIGEEEEEKEVDGESDEHVVTPD--- 330

Query: 254 CENLTEGVRARWLHEPDEKDRIGASHFRRILYCSCGKLETYFGCDFIEISIWGESFMLHQ 313
            +N     RA+WL+EPDE D+I  +HFR++  C  GKLE   G  F+EISIWGESFMLHQ
Sbjct: 331 SDNSQVYSRAKWLYEPDETDKISGAHFRKVFRCRSGKLENSLGFGFVEISIWGESFMLHQ 390

Query: 314 IRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGAPMRS 373
           IRKMI TAVAVKR+LLPRDII LSL KF+RIVLP+AP+EVL+LRGNSF  R+ P  P   
Sbjct: 391 IRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFEVRRLPERP--- 450

Query: 374 ELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEWVEKLDKYTSIPNEELDEVR 433
            +    ES+++   + EFYR+ ++P+V+ FLD+E  PWKEWV+ LD+   + +EEL++VR
Sbjct: 451 GMEATGESEEVEKEIEEFYRAVMVPQVSIFLDSEKSPWKEWVDHLDRNDGLIDEELEDVR 495

Query: 434 SAWKAWNRRFGKTFAVKKKTFND 457
             W+ W  +  K +   KKT +D
Sbjct: 511 KGWEEW--KAAKPWMNLKKTEDD 495

[Close]
BLAST of Cucsa.152010 vs. TAIR10
Match: AT1G20370.1 (AT1G20370.1 Pseudouridine synthase family protein)

HSP 1 Score: 118.6 bits (296), Expect = 9.9e-27
Identity = 101/368 (27.45%), Postives = 168/368 (45.65%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IE ELE+A++ AG + D++        WARS+RTDKGV ++   ++      G  ++D P
Sbjct: 83  IEGELEEALFHAGAVPDADRNKPRNYEWARSARTDKGVSAVGQVVS------GRFYVDPP 142

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPA----KLIGIESKLK 133
                 + +NS LPD I+VFG       F  +K CD R Y YL+P       +  E+++ 
Sbjct: 143 ---GFVERLNSKLPDQIRVFGYKRVAPSFSSKKFCDRRRYVYLIPVFALDPCVHGEAEMV 202

Query: 134 TTE--------IDCHISDFKDIL------------KSFEVRYDLLQLITYASYCPFLHCK 193
            T+        ++C    +K  L            KS E++ D+      +S C  +   
Sbjct: 203 RTDLGYEYVKCVECSEKGYKIPLGVMGKDTDCCDTKSLEIQSDI-----SSSTCDAIGA- 262

Query: 194 KHDLLFDTVNSFWPQGDHPFHNYTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEG 253
             D+  +T++S  P  ++  ++  +     + + +K     ++    ++  +M+N E E 
Sbjct: 263 --DVKCETLSSSVPSAENNLNSEVLDGADVSALSSK--AEGMEESNTLAKVEMNNGEGED 322

Query: 254 SDQENDTFVEGIKEPDQRSPSLSVCENLTEGVRARWLHEPDEKDRIG-ASHFRRILYCSC 313
             +    F  G KE ++ +  LS        V +   H    + +    +  R IL  + 
Sbjct: 323 MTKSESKFCYGEKEKERFNRILSYY------VGSHNFHNFTTRTKAADPAANRYILSFNA 382

Query: 314 GKLETYFGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPI 357
             +    G DF++  + G+SFMLHQIRKMI  AVA+ R   P  +I  S  K  RI +P+
Sbjct: 383 NTVINLDGKDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNYAPESLIEASFKKDVRINVPM 425

[Close]
BLAST of Cucsa.152010 vs. TAIR10
Match: AT1G76120.1 (AT1G76120.1 Pseudouridine synthase family protein)

HSP 1 Score: 69.7 bits (169), Expect = 5.3e-12
Identity = 44/135 (32.59%), Postives = 68/135 (50.37%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IE ELE+A++ AG + +S  G      +ARS+RTDKGV ++        ++    +I DP
Sbjct: 47  IEGELEEALFHAGAVPESIRGKPKLYDFARSARTDKGVSAVG-------QVVSGRFIVDP 106

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTTEI 133
            G    + +NS LP+ I++FG       F  +K CD R Y YLLP   +   S      +
Sbjct: 107 LG--FVNRLNSNLPNQIRIFGYKHVTPSFSSKKFCDRRRYVYLLPVFALDPISHRDRETV 166

Query: 134 DCHISDFKDILKSFE 149
              +   ++ +K FE
Sbjct: 167 MASLGPGEEYVKCFE 172


HSP 2 Score: 54.7 bits (130), Expect = 1.8e-07
Identity = 31/86 (36.05%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 281 RRILYCSCGKLETYFGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTK 340
           R+I+  +   +    G DFI+  + G+SFMLHQIRKM+  AVA+ R      +I  + +K
Sbjct: 297 RQIISFTANTVINLDGIDFIKCEVLGKSFMLHQIRKMMGLAVAIMRNCASESLIQSAFSK 356

Query: 341 FSRIVLPIAPAEVLVLRGNSFSNRKR 367
              I +P+AP   L L    F++  R
Sbjct: 357 DVNITVPMAPEVGLYLDECFFTSYNR 382

[Close]
BLAST of Cucsa.152010 vs. NCBI nr
Match: gi|700210765|gb|KGN65861.1| (hypothetical protein Csa_1G533680 [Cucumis sativus])

HSP 1 Score: 685.3 bits (1767), Expect = 7.5e-194
Identity = 363/461 (78.74%), Postives = 374/461 (81.13%), Query Frame = 1 

Query: 1   MQKINLIKFWCIAIEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITL 60
           MQKINLIKFWCIAIEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITL
Sbjct: 1   MQKINLIKFWCIAIEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITL 60

Query: 61  KMEIPGSAWIDDPCGISLADYINSYLPDNIKVFGIVPAQK------RFDPRKECDVRMYS 120
           KMEIPGSAWIDDPCGISLADYINSYLPDNIKVF             RFDPRK        
Sbjct: 61  KMEIPGSAWIDDPCGISLADYINSYLPDNIKVF------GIVPAQKRFDPRK-------- 120

Query: 121 YLLPAKLIGIESKLKTTEIDCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLL 180
                     + ++ +  +   +   +  LK+ E+                  C   D  
Sbjct: 121 --------ECDVRMYSYLLPAKLIGIESKLKTTEI-----------------DCHISDFK 180

Query: 181 FDTVNSFWPQGDHPFHNYTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQEN 240
            D + SF  +GDHPFHNYTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQEN
Sbjct: 181 -DILKSF--EGDHPFHNYTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQEN 240

Query: 241 DTFVEGIKEPDQRSPSLSVCENLTE-------------GVRARWLHEPDEKDRIGASHFR 300
           DTFVEGIKEPDQRSPSLSVCENLTE             GVRARWLHEPDEKDRIGASHFR
Sbjct: 241 DTFVEGIKEPDQRSPSLSVCENLTEVCSKLEDGSELLKGVRARWLHEPDEKDRIGASHFR 300

Query: 301 RILYCSCGKLETYFGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKF 360
           RILYCSCGKLETYFGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKF
Sbjct: 301 RILYCSCGKLETYFGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKF 360

Query: 361 SRIVLPIAPAEVLVLRGNSFSNRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVT 420
           SRIVLPIAPAEVLVLRGNSFSNRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVT
Sbjct: 361 SRIVLPIAPAEVLVLRGNSFSNRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVT 419

Query: 421 KFLDTESPPWKEWVEKLDKYTSIPNEELDEVRSAWKAWNRR 443
           KFLDTESPPWKEWVEKLDKYTSIPNEELDEVRSAWKAW  R
Sbjct: 421 KFLDTESPPWKEWVEKLDKYTSIPNEELDEVRSAWKAWKYR 419

[Close]
BLAST of Cucsa.152010 vs. NCBI nr
Match: gi|449454977|ref|XP_004145230.1| (PREDICTED: putative tRNA pseudouridine synthase [Cucumis sativus])

HSP 1 Score: 657.5 bits (1695), Expect = 1.7e-185
Identity = 350/448 (78.12%), Postives = 361/448 (80.58%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP
Sbjct: 100 IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 159

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQK------RFDPRKECDVRMYSYLLPAKLIGIESK 133
           CGISLADYINSYLPDNIKVF             RFDPRK                  + +
Sbjct: 160 CGISLADYINSYLPDNIKVF------GIVPAQKRFDPRK----------------ECDVR 219

Query: 134 LKTTEIDCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLLFDTVNSFWPQGDH 193
           + +  +   +   +  LK+ E+                  C   D   D + SF  +GDH
Sbjct: 220 MYSYLLPAKLIGIESKLKTTEI-----------------DCHISDFK-DILKSF--EGDH 279

Query: 194 PFHNYTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQENDTFVEGIKEPDQR 253
           PFHNYTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQENDTFVEGIKEPDQR
Sbjct: 280 PFHNYTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGSDQENDTFVEGIKEPDQR 339

Query: 254 SPSLSVCENLTE-------------GVRARWLHEPDEKDRIGASHFRRILYCSCGKLETY 313
           SPSLSVCENLTE             GVRARWLHEPDEKDRIGASHFRRILYCSCGKLETY
Sbjct: 340 SPSLSVCENLTEVCSKLEDGSELLKGVRARWLHEPDEKDRIGASHFRRILYCSCGKLETY 399

Query: 314 FGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVL 373
           FGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVL
Sbjct: 400 FGCDFIEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVL 459

Query: 374 VLRGNSFSNRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEW 433
           VLRGNSFSNRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEW
Sbjct: 460 VLRGNSFSNRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEW 505

Query: 434 VEKLDKYTSIPNEELDEVRSAWKAWNRR 443
           VEKLDKYTSIPNEELDEVRSAWKAW  R
Sbjct: 520 VEKLDKYTSIPNEELDEVRSAWKAWKYR 505

[Close]
BLAST of Cucsa.152010 vs. NCBI nr
Match: gi|659114949|ref|XP_008457308.1| (PREDICTED: putative tRNA pseudouridine synthase [Cucumis melo])

HSP 1 Score: 606.3 bits (1562), Expect = 4.4e-170
Identity = 322/443 (72.69%), Postives = 346/443 (78.10%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IEQELE AIYKAGGI +SNYGNLNKISWARSSRTDKGVHSLATTITLKMEIP SAW+ DP
Sbjct: 100 IEQELEAAIYKAGGIRESNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPESAWMGDP 159

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTTEI 133
           CGISLADYINSYLPDNIKVFGIVP+Q+ FDPRK                           
Sbjct: 160 CGISLADYINSYLPDNIKVFGIVPSQRSFDPRK--------------------------- 219

Query: 134 DCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLLFDTVNSFWPQGDHPFHNYT 193
           +C +  +  +L +  +  +  +L T    C     K      D +NSF  +G+HPFHNYT
Sbjct: 220 ECDVRKYSYLLPAKLIGIES-KLKTTEIDCHISDFK------DILNSF--EGEHPFHNYT 279

Query: 194 VRSIYRTRIRAKQLV-YALKSGKKVSPGDMSNSEFEGSDQENDTFVEGIKEPDQRSPSLS 253
           +RS YRTRIRAKQ   YALKSG KVSPG+MSN EFE SD+E+DTFVEG+KEPDQ SPSLS
Sbjct: 280 IRSNYRTRIRAKQSPGYALKSGNKVSPGEMSNFEFEESDREDDTFVEGVKEPDQCSPSLS 339

Query: 254 VCENLTE-------------GVRARWLHEPDEKDRIGASHFRRILYCSCGKLETYFGCDF 313
           VCENLTE             GVRARWLHEPDEKDRIGASHFRRIL CSCGKLET FG DF
Sbjct: 340 VCENLTEVCSKLEDGSELLKGVRARWLHEPDEKDRIGASHFRRILCCSCGKLETSFGYDF 399

Query: 314 IEISIWGESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVLRGN 373
           IEISIWGESFMLHQIRKMI TAVAVKRKLLPRD+I LSLTKFSRIVLPIAPAEVLVLRGN
Sbjct: 400 IEISIWGESFMLHQIRKMIGTAVAVKRKLLPRDVIALSLTKFSRIVLPIAPAEVLVLRGN 459

Query: 374 SFSNRKRPGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEWVEKLD 433
           SFS RKRPG P R +L TLNESDDI+ SVNEFYRSAILPEVT+FLDTESPPWKEWVEKLD
Sbjct: 460 SFSTRKRPGVPTRPDLVTLNESDDIIKSVNEFYRSAILPEVTEFLDTESPPWKEWVEKLD 506

Query: 434 KYTSIPNEELDEVRSAWKAWNRR 443
           KYTSIPNEELDEVRSAWKAW  R
Sbjct: 520 KYTSIPNEELDEVRSAWKAWKYR 506

[Close]
BLAST of Cucsa.152010 vs. NCBI nr
Match: gi|1000969238|ref|XP_015573835.1| (PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Ricinus communis])

HSP 1 Score: 444.5 bits (1142), Expect = 2.2e-121
Identity = 237/437 (54.23%), Postives = 302/437 (69.11%), Query Frame = 1 

Query: 14  IEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWIDDP 73
           IE ELE AI+KAGGI DSNYGNL+KI+WARSSRTDKGVHSLAT I++KMEIP +AW +DP
Sbjct: 82  IEAELECAIFKAGGILDSNYGNLHKIAWARSSRTDKGVHSLATMISMKMEIPENAWKEDP 141

Query: 74  CGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTTEI 133
            GI+LA+ +N YLPDNI++F I+P+QK FDPR+EC++R YSYLLPA++IGI+    + EI
Sbjct: 142 NGIALAECVNYYLPDNIRIFSILPSQKSFDPRRECNLRKYSYLLPAEIIGIKGHFTSAEI 201

Query: 134 DCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLLFDTVNSFWPQGDHPFHNYT 193
           D HISDF DIL +FE  +            PF     H+    T+ S + +       Y 
Sbjct: 202 DNHISDFNDILNAFEGEH------------PF-----HNY---TIRSKYRK------QYP 261

Query: 194 VRSIYRTRIRAKQLVYALKSGKKVSPG-------DMSNSEFEGSDQENDTFVEGIKEPDQ 253
                R   RA+       S  + S G       +++  +  GS Q +  F    +  +Q
Sbjct: 262 TAITGRVPKRARSSSERSTSESEKSDGEEDYEIDEINIEDHNGSIQSSSKF----RFSNQ 321

Query: 254 RSPSLSVCENLTEGVRARWLHEPDEKDRIGASHFRRILYCSCGKLETYFGCDFIEISIWG 313
           +   +   +    G+ ARWL+EPDE DRIGASHFR+I  CSCGKLET  G DF+EISIWG
Sbjct: 322 QKGGVLEQQQYNAGILARWLYEPDETDRIGASHFRKIFRCSCGKLETSKGFDFVEISIWG 381

Query: 314 ESFMLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVLRGNSFSNRKR 373
           ESFMLHQIRKM+ TAVAVKRKLLPRDI+ LSL KFSRIVLP+AP+EVLVLRGN+FS RKR
Sbjct: 382 ESFMLHQIRKMVGTAVAVKRKLLPRDILPLSLAKFSRIVLPLAPSEVLVLRGNNFSLRKR 441

Query: 374 PGAPMRSELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEWVEKLDKYTSIPN 433
           P    R E+ T+ ES++I+N+VN+FY + +LP+V+K LD    PWK W+EKLD+YTSIP+
Sbjct: 442 PDIGARLEMLTMVESEEILNAVNKFYSNIMLPQVSKLLDPCGSPWKIWIEKLDEYTSIPD 488

Query: 434 EELDEVRSAWKAWNRRF 444
            +L+EVRSAW  W  +F
Sbjct: 502 AQLEEVRSAWHLWKEKF 488

[Close]
BLAST of Cucsa.152010 vs. NCBI nr
Match: gi|566201414|ref|XP_002319961.2| (hypothetical protein POPTR_0013s15030g [Populus trichocarpa])

HSP 1 Score: 441.8 bits (1135), Expect = 1.4e-120
Identity = 244/434 (56.22%), Postives = 298/434 (68.66%), Query Frame = 1 

Query: 12  IAIEQELEDAIYKAGGICDSNYGNLNKISWARSSRTDKGVHSLATTITLKMEIPGSAWID 71
           + IE ELE AIY+AGGI +SNYGNLNKISWARSSRTDKGVHSLATTIT+KMEIP +AW D
Sbjct: 102 LTIEGELERAIYEAGGIRESNYGNLNKISWARSSRTDKGVHSLATTITMKMEIPENAWKD 161

Query: 72  DPCGISLADYINSYLPDNIKVFGIVPAQKRFDPRKECDVRMYSYLLPAKLIGIESKLKTT 131
           D  G+ LA ++NSYLPD+I+V  I+PAQK FDPR+ECD+R YSYLLPA++IGI+S     
Sbjct: 162 DLYGMVLAKHVNSYLPDSIRVLSILPAQKSFDPRRECDIRKYSYLLPAEVIGIKSHFSMA 221

Query: 132 EIDCHISDFKDILKSFEVRYDLLQLITYASYCPFLHCKKHDLLFDTVNSFWPQGDHPFHN 191
           EID HISDF +IL +FE  +            PF     H+    TV S + +  +P  N
Sbjct: 222 EIDDHISDFNNILNAFEGDH------------PF-----HNY---TVRSKY-RRKYPTKN 281

Query: 192 YTVRSIYRTRIRAKQLVYALKSGKKVSPGDMSNSEFEGS--DQENDTFVEGIKEPDQRSP 251
             V        RA+       SG + +  ++S +  E S  D   D     +K+     P
Sbjct: 282 GHVSK------RARSSWGTSASGSEENHVELSQNSLESSICDLNGDI----LKDQSSNLP 341

Query: 252 SLSVCENLTEGVRARWLHEPDEKDRIGASHFRRILYCSCGKLETYFGCDFIEISIWGESF 311
                      +RARWLHEPDE DRIGA+HFR+I  CSCGKLE   G DF+EISIWGESF
Sbjct: 342 -----------LRARWLHEPDETDRIGAAHFRKIFRCSCGKLEKSLGFDFVEISIWGESF 401

Query: 312 MLHQIRKMIATAVAVKRKLLPRDIITLSLTKFSRIVLPIAPAEVLVLRGNSFSNRKRPGA 371
           MLHQIRKM+ TAVAVKRK+LPRD+I LSLTKFSRIVLP+AP+EVL+LRGN FS RK+ G 
Sbjct: 402 MLHQIRKMVGTAVAVKRKVLPRDLIMLSLTKFSRIVLPLAPSEVLILRGNDFSLRKKSGE 461

Query: 372 PMRSELFTLNESDDIVNSVNEFYRSAILPEVTKFLDTESPPWKEWVEKLDKYTSIPNEEL 431
             R E+ T+ ES++I+ +VNEFY + +LP+V+KFLD   P WKEWVE LDKYTSIP+ +L
Sbjct: 462 GKRPEMETMVESEEILRAVNEFYSTMMLPQVSKFLDPCMPLWKEWVENLDKYTSIPDAQL 493

Query: 432 DEVRSAWKAWNRRF 444
           DEVR A K W   F
Sbjct: 522 DEVRIARKVWMENF 493

The following BLAST results are available for this feature:
BLAST of Cucsa.152010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PUSH_ARATH9.1e-10747.63Putative tRNA pseudouridine synthase OS=Arabidopsis thaliana GN=At2g30320 PE=3 S... [more]
PUS1_ASHGO1.5e-1344.76tRNA pseudouridine synthase 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51... [more]
PUS1_KLULA5.9e-1343.24tRNA pseudouridine synthase 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 23... [more]
PUS1_YARLI3.8e-1237.14tRNA pseudouridine synthase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) G... [more]
PUS1_CANGA6.5e-1242.34tRNA pseudouridine synthase 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / ... [more]
BLAST of Cucsa.152010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0Z2_CUCSA5.2e-19478.74tRNA pseudouridine synthase OS=Cucumis sativus GN=Csa_1G533680 PE=3 SV=1[more]
B9I6V0_POPTR1.0e-12056.22Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s15030g PE=4 SV=2[more]
A0A067LBA9_JATCU1.7e-12055.07Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17338 PE=4 SV=1[more]
A5C2V2_VITVI3.6e-11853.06Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034891 PE=4 SV=1[more]
A0A059AID4_EUCGR4.7e-11851.62Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03050 PE=4 SV=1[more]
BLAST of Cucsa.152010 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G30320.15.1e-10847.63 Pseudouridine synthase family protein[more]
AT1G20370.19.9e-2727.45 Pseudouridine synthase family protein[more]
AT1G76120.15.3e-1232.59 Pseudouridine synthase family protein[more]
BLAST of Cucsa.152010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210765|gb|KGN65861.1|7.5e-19478.74hypothetical protein Csa_1G533680 [Cucumis sativus][more]
gi|449454977|ref|XP_004145230.1|1.7e-18578.13PREDICTED: putative tRNA pseudouridine synthase [Cucumis sativus][more]
gi|659114949|ref|XP_008457308.1|4.4e-17072.69PREDICTED: putative tRNA pseudouridine synthase [Cucumis melo][more]
gi|1000969238|ref|XP_015573835.1|2.2e-12154.23PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Ricinus communis][more]
gi|566201414|ref|XP_002319961.2|1.4e-12056.22hypothetical protein POPTR_0013s15030g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001406PsdUridine_synth_TruA
IPR020094Pseudouridine synthase I, TruA, N-terminal
IPR020095PsdUridine_synth_TruA_C
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020103PsdUridine_synth_cat_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0009451RNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0008033 tRNA processing
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
molecular_function GO:0009982 pseudouridine synthase activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.152010.1Cucsa.152010.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 185..199
score: 9.1E-141coord: 276..443
score: 9.1E-141coord: 13..148
score: 9.1E
IPR020094Pseudouridine synthase I, TruA, N-terminalGENE3DG3DSA:3.30.70.580coord: 13..108
score: 2.1
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3DG3DSA:3.30.70.660coord: 279..362
score: 1.0E-18coord: 184..201
score: 1.0
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 277..356
score: 1.
IPR020103Pseudouridine synthase, catalytic domainunknownSSF55120Pseudouridine synthasecoord: 13..122
score: 1.58E-18coord: 277..363
score: 9.06
NoneNo IPR availablePANTHERPTHR11142:SF9TRNA PSEUDOURIDINE SYNTHASEcoord: 276..443
score: 9.1E-141coord: 13..148
score: 9.1E-141coord: 185..199
score: 9.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.152010Csa1G533680Cucumber (Chinese Long) v2cgycuB219
Cucsa.152010MELO3C020497Melon (DHL92) v3.5.1cgymeB255
Cucsa.152010CSPI01G24420Wild cucumber (PI 183967)cgycpiB224
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.152010Melon (DHL92) v3.6.1cgymedB253
Cucsa.152010Silver-seed gourdcarcgyB0601
Cucsa.152010Silver-seed gourdcarcgyB0602
Cucsa.152010Cucumber (Chinese Long) v3cgycucB230
Cucsa.152010Watermelon (97103) v2cgywmbB257
Cucsa.152010Wax gourdcgywgoB296
Cucsa.152010Cucurbita maxima (Rimu)cgycmaB0418
Cucsa.152010Cucurbita maxima (Rimu)cgycmaB0421
Cucsa.152010Cucurbita moschata (Rifu)cgycmoB0417
Cucsa.152010Cucurbita moschata (Rifu)cgycmoB0418
Cucsa.152010Cucurbita moschata (Rifu)cgycmoB0421
Cucsa.152010Watermelon (Charleston Gray)cgywcgB256
Cucsa.152010Watermelon (97103) v1cgywmB270
Cucsa.152010Cucurbita pepo (Zucchini)cgycpeB0405
Cucsa.152010Bottle gourd (USVL1VR-Ls)cgylsiB244