Cucsa.149560 (gene) Cucumber (Gy14) v1

NameCucsa.149560
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold01110 : 411565 .. 412411 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCCATATCCAGCAAATACAAATAGAAGATTCTTGATCTGTATTGCAGCACCATCCAAGCGAGGCACAGGAGCAGTTGTCATCTTCTTCCATGTTAACTCTGGAGCTGGCAGATCAGCAAAGGTTGCTGACAGGGCTCTCCCAGGATTAACGTCCTTGCCGCCTTTAGCAGCCTCTCCCTGCAGTAACCACAGAAAGGGGATAATTGAAAATAAAATTCAGATTGTTCGAAACTTTTGTGAGTCTCTTACTCTCATTATAAGAACGTGAGCTGAAATTCTATAATCATAGGATATAAATCTAAGGTAGTTGCCACACAGTTTTTTTATTCAATGAGAGTTTTTTTTTttCTTTTGATAGAAACAACTGCTTTTGTTGAGGAAAAAAaTGAAAGAATACAAGGGCATACAAAAAAaCTAAGTCCACAAAAGAACTCACTAAAGAAAGAGTTCCCAACTAAGTAAGTGGTTTGCAGAGAATAATTTTGATAAAAAAAaTTATTAAAAAAAaTTGAAACTAAAGCCTAAAAAAAaCATGGAACCTCACCAGGGATCAAACTTCACCTAAGATCACTATCCTCACCTCTAAATACTTTACTGCTCTTCTCCTCCTAAAGATCTCACAACAAAGCGCACACTCCACCAAACCACAAGAAACAACTTTTTtCTTCGAAAGGAGGATGAAAGAGGAACTCCCAGATCATTGCAATTCGCACAAACATTCTTGACAACTAACACAAAATCAAACTCTTGAAAAAAGCAGTTCGACACAAGACTAGCAAACTGACACTCCTGGTGACGGTGATCCAGGTTTTCTTCCAGCTTCCAACAAAGGATACTCATAA

mRNA sequence

ATGGTGCCATATCCAGCAAATACAAATAGAAGATTCTTGATCTGTATTGCAGCACCATCCAAGCGAGGCACAGGAGCAGTTGTCATCTTCTTCCATGTTAACTCTGGAGCTGGCAGATCAGCAAAGGTTGCTGACAGGGCTCTCCCAGGATTAACGTCCTTGCCGCCTTTAGCAGCCTCTCCCTGCAGTAACCACAGAAAGGGGATAATTGAAAATAAAATTCAGATTGTTCGAAACTTTTgttttcttccagcttccaacaaaggatactcataa

Coding sequence (CDS)

ATGGTGCCATATCCAGCAAATACAAATAGAAGATTCTTGATCTGTATTGCAGCACCATCCAAGCGAGGCACAGGAGCAGTTGTCATCTTCTTCCATGTTAACTCTGGAGCTGGCAGATCAGCAAAGGTTGCTGACAGGGCTCTCCCAGGATTAACGTCCTTGCCGCCTTTAGCAGCCTCTCCCTGCAGTAACCACAGAAAGGGGATAATTGAAAATAAAATTCAGATTGTTCGAAACTTTTGTTTTCTTCCAGCTTCCAACAAAGGATACTCATAA

Protein sequence

MVPYPANTNRRFLICIAAPSKRGTGAVVIFFHVNSGAGRSAKVADRALPGLTSLPPLAASPCSNHRKGIIENKIQIVRNFCFLPASNKGYS*
BLAST of Cucsa.149560 vs. TrEMBL
Match: A0A0A9GPG4_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-09
Identity = 34/44 (77.27%), Postives = 36/44 (81.82%), Query Frame = 1

Query: 1  MVPYPANTNRRFLICIAAPSKRGTGAVVIFFHVNSGAGRSAKVA 45
          MVPYPANT +RFLICIAAPSKR TGA  I  H NSGAG+SA VA
Sbjct: 1  MVPYPANTYKRFLICIAAPSKRTTGASAISSHFNSGAGKSANVA 44

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A9GPG4_ARUDO2.7e-0977.27Uncharacterized protein OS=Arundo donax PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.149560.1Cucsa.149560.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None