Cucsa.148450 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.148450
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionHexokinase-1
Locationscaffold01107 : 530438 .. 533928 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTGCTCATACTGTAGCCGAATTCGAGAGAGAAGATGAGCGAGCCAAGGCCTGTGAAAAGGAGAGAAAGCCCATGGGGAATGCCGGAAGGAGATGATCGCCAACCTAAGGCTCACAGATGCAATGACAGAGCTGAGGATGTCATCCAAGTAAACTTTTAACTTCTTCAAAATTTATCAGTTTATCACCATCCTTCGCATCCTTTTCCACCATTTACTCTTCTTCTTCTTTATTCTGATTTCAATTTGTTTCTAATGGACGGACTTGAAAAATTAAGATCGATATGATTCTGGAGTTTGTCACCGATAGGTATTATGCGGTTTATTTCAATTATCTTTTGAGTCGACATTAAACATTTCCTTCAATGTCCTGTTTCCTGAAGTAATTTAATTATGATGTGCTTTTCATGTGGATTTTGGAGAAGTGAATTCGAGAAGTTGGAAGCAAGATATATGAATATGAAGTTTTGCTGACTATTATCTTAGAAATTGTGGCCGATAGTTATTACGGAACTTATGAGCATCTTCTTTAAGTTAACAGAAAAATCACTGGAAAGATAACTGCAGTATTTTAAGTAGCAGTGAGGTTAATTTGTTGAAATTCTGAACGGATTGAATGGCCAAGGGGATCGGATCAGAGGTTGTGCGCTGATTGGAAATAGTTTTTCTGTTGGAGGTTCTTTTATCATTTGAGCAGTAGTGAATATTTTCTCTTCAAAGTAAAGCCTTAAGCGTACGTTTGCTATTAGATTTTCCTGCAATTAGCTATGTTCTGGATGTAAAGGAGAAAATAGAACTCCCGAACCTCACCTATGCGATTTCTCCTCCAACACCAATACGCACAAAGCTATTAGGGTTCAAGTTCAAAGGTCTCCGGAATTTCGTTAGCATTTATTTCATTCTGGCTACAACAGGCTATCACATTGTTAAGCAAATTATTATTTCATTCATTTTAGTTTTGAATCGGCTCCAAATATGTTTTTCTTTAATTATTTATTAGAGACGCTGGAAGAAAAAAAAaTCTCAAGAGGAAAATGTGTATAGAAAGTTCGTTAATTCTCGTATTTCCTCTTTTCTTTTCTTTTTTTtGCCCGTCTGTAACTTTtGTTTTTtCCATAAGCAAACACTGTTTGTTGATAATAGTGGGGAGCTAAGGACTTAGGAGTTAAACCAGTTGGAATGTTTTGGCATGACTAGAGTCTACTTAATGACTCTAGAAAGTATTTGCTTCTTCCCTTTCACCAGACAACTCCTCACCTTTTCAGTTAAAGGCTTTAAAAATTCAATGCACATAGGTTTACCTCTTAAGGAGAGAACTAAATATTTTAGAGGCGAGACACCCAGTTTGCATCCCCAAAGATCCACAACCTAAAGCTCCATTAGGATACGAGCTGATCCTAACAATCATTCTGTTTGTAAGATTGATTGAAAAATCAGATGAGAGTTCTAAAGACTACTTTACGTTTAGAAGACTCACCACTTTTAGCATTATTTTAAGAGGAAAGCATCAGAAATTGTTTAGTAGAGTGATATAACTTCATTTtCTTGACCAAGAAGCCTTCAATAACCCTGGGCTAGACTTATCCATCTCTTCTAAAGGATAGTGTAGATCATCTTGCTGATCATTCCTTTAGGCTTTAGATTGAGCAGAAATTAGCATTAGAAAGAAACGTGTATCCACTTAGGTCAGAACATGAAGCCTAAGAAATTTGTCAAAGATGGTTTTATCAAAATAGAAGTAAGCTTTTTATTCGAAACTCCTAGTCCTCTCTCTTTTACTTGATGGAAGTGATGAAGTCATTGACTCAACTGGTTAAGCTGATTTGTTAGGTTGGCAATGGTAATATGGATGCCTCTGGCTCTTCTGGCGTCTGGTGACCATACATTGAAAATTTTTCCTAGAGTTGATTGTACGTCGACAGTTCCTTCACTCAATGTCAAACAGAACTCTGCAAAACCAGGCTTGTAAATGTCTCTTTCACCCATTTTTACAGACTTAAGCTGAAAAGTCAACAGGCTTAAACCCGGAGAAGAAACTGCATCACTAGCTTCTTCTTCGAAGGAAGGAAGCGAGATAAACTGACAGAAAATTCCACTCTTCTTCACAAGGCTAGATTAGATCCATCCAAGGAGAGGATTTAAAAAAaCAAGGTTCTTCCTGTTAACAAGATTCTGAAGTAATCTTATTCCAATAAAATGTATCCTCTTCAAGAAAGAATATAACTTTTTTTtGGGTGATGGAAGTTGTGTGAAAGTGGTAGAATTTCATGAATGATTTCTGATTATAGTTCTTGTTTTCTTGTAGGCTTGTTTTGAAGGGAACCCATTTAAGACTGTTCCAGGACCATTCAAGCTGTTCTGGCAATGCATGCGTTCTAAACCTGGGTACGGCTGTATTTAACATTTATCATAGTTCTATTTTATTTAATCTCAAGATAGATTCATTTCATCAGTACGAGGACTTTAGCTTTACTTTTCAAGAGAGATCACCGACGAAATTGACAGAATGATGGTTCCTTATAGTCGTTTACCTGAAACAAATCTTTCAGCTGCTGATTACACTTGATTCAGACTCTCTCTTTCGTATCGATTCTTTCAGTCGGCTTTAACAATCTAAAAATCGTTTTGAACTCATAACATTTGTAAAATAGTTTCTGAAAGCATTTTTAAATAAAAGTGAAAATAGAAACAACAGTTTAAGCTTAGTGGTTATAAACTGATAAGACACTTGGATATTTATTAAACAGAGATGATAGTTTTCTTTTTCCATCGTTAGGACTATTGTTTTAGCAAATTTTAGATACCATCCCTTTGTTTTTAAGCCTGATAAACGAAGGAAGTTGGAGAAAAATCCCTTGACATTGATAATAATTTAACAAAATGCTATATTATATGTTATGGACCATGTGATCTTTGATTTTGCAGGGAGGAACCAACAGAGCCATATACATATTTGGACTTCGATCCTCCAAAGAGAGAGGTGAAACTTGAGTAAGAATTCAAAATCCATGTTACAACGCAACTTTTAATCCATAAATGTTAGAATTTCCGTTTTGATACTTTGTCTCATGTTAATCCTAAGTGAGCACTTGGTTGATAGGTTACCCAGTTAAATGGTCTATGGGATCGGCAGTAATAATTTATATGATGGAATAGCTTGTAAGCTTTTCGACCATATTGAATATGTCAGAATTGATTTAATGGTTACTATTATATTTTTtCCTCATGTTCAATGTCTTCTTTTGCAGCTTCCATGATGAATAGTAACCTTAACAAGAAACTTGCTTTTTCTGACCTAACAAGTTTGCAAATTTGTTATTAGCTTGCATCCAATTATTCAATGTGATGAAGGAATTGCCACTCATCTGCCTTGATCTTAGAACTTTAAATTTGAAGCCTATTTTATCTTATCTTTTTTTTttCTTTTGCTCTGATATTTTGGGCTCCTCGATAACTCAATAGTCAATTTTtGGTTTTTAAATGACAAAGCTGC

mRNA sequence

ACTGCTCATACTGTAGCCGAATTCGAGAGAGAAGATGAGCGAGCCAAGGCCTGTGAAAAGGAGAGAAAGCCCATGGGGAATGCCGGAAGGAGATGATCGCCAACCTAAGGCTCACAGATGCAATGACAGAGCTGAGGATGTCATCCAAGCTTGTTTTGAAGGGAACCCATTTAAGACTGTTCCAGGACCATTCAAGCTGTTCTGGCAATGCATGCGTTCTAAACCTGGGGAGGAACCAACAGAGCCATATACATATTTGGACTTCGATCCTCCAAAGAGAGAGGTGAAACTTGAGTAAGAATTCAAAATCCATGTTACAACGCAACTTTTAATCCATAAATGTTAGAATTTCCGTTTTGATACTTTGTCTCATGTTAATCCTAAGTGAGCACTTGGTTGATAGGTTACCCAGTTAAATGGTCTATGGGATCGGCAGTAATAATTTATATGATGGAATAGCTTGTAAGCTTTTCGACCATATTGAATATGTCAGAATTGATTTAATGGTTACTATTATATTTTTTCCTCATGTTCAATGTCTTCTTTTGCAGCTTCCATGATGAATAGTAACCTTAACAAGAAACTTGCTTTTTCTGACCTAACAAGTTTGCAAATTTGTTATTAGCTTGCATCCAATTATTCAATGTGATGAAGGAATTGCCACTCATCTGCCTTGATCTTAGAACTTTAAATTTGAAGCCTATTTTATCTTATCTTTTTTTTTTCTTTTGCTCTGATATTTTGGGCTCCTCGATAACTCAATAGTCAATTTTTGGTTTTTAAATGACAAAGCTGC

Coding sequence (CDS)

ATGAGCGAGCCAAGGCCTGTGAAAAGGAGAGAAAGCCCATGGGGAATGCCGGAAGGAGATGATCGCCAACCTAAGGCTCACAGATGCAATGACAGAGCTGAGGATGTCATCCAAGCTTGTTTTGAAGGGAACCCATTTAAGACTGTTCCAGGACCATTCAAGCTGTTCTGGCAATGCATGCGTTCTAAACCTGGGGAGGAACCAACAGAGCCATATACATATTTGGACTTCGATCCTCCAAAGAGAGAGGTGAAACTTGAGTAA

Protein sequence

MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCMRSKPGEEPTEPYTYLDFDPPKREVKLE*
Homology
[Close]
BLAST of Cucsa.148450 vs. TrEMBL
Match: A0A0A0K6V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044220 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.4e-47
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 88
          RSKPGEEPTEPYTYLDFDPPKREVKLE
Sbjct: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 87

[Close]
BLAST of Cucsa.148450 vs. TrEMBL
Match: W9S2L6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018248 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.4e-42
Identity = 80/86 (93.02%), Postives = 81/86 (94.19%), Query Frame = 1 

Query: 2  SEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCMR 61
          SE RPV RRESPWGMPEGD RQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCMR
Sbjct: 4  SETRPVPRRESPWGMPEGDHRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCMR 63

Query: 62 SKPGEEPTEPYTYLDFDPPKREVKLE 88
          SKPGEEPTEPY YL+ DPPKREVKLE
Sbjct: 64 SKPGEEPTEPYAYLELDPPKREVKLE 89

[Close]
BLAST of Cucsa.148450 vs. TrEMBL
Match: A0A0B0PQK5_GOSAR (Hexokinase-1 OS=Gossypium arboreum GN=F383_07909 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-42
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 1 

Query: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          M E RPV RRESPWGMPEG+ RQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MGETRPVPRRESPWGMPEGEHRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 88
          RSKPGEEPTEPYTYL  DPPKREV+LE
Sbjct: 61 RSKPGEEPTEPYTYLQLDPPKREVELE 87

[Close]
BLAST of Cucsa.148450 vs. TrEMBL
Match: A0A0D2QNI2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G051600 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-42
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 1 

Query: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          M E RPV RRESPWGMPEG+ RQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MGETRPVPRRESPWGMPEGEHRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 88
          RSKPGEEPTEPYTYL  DPPKREV+LE
Sbjct: 61 RSKPGEEPTEPYTYLQLDPPKREVELE 87

[Close]
BLAST of Cucsa.148450 vs. TrEMBL
Match: A0A067DSY1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034327mg PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 6.8e-42
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 1 

Query: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSE RPV RRESPWG PEG+ RQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSETRPVPRRESPWGTPEGEHRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 88
          RSKPGEEPTEP+TYL  DPPKREVKLE
Sbjct: 61 RSKPGEEPTEPFTYLQLDPPKREVKLE 87

[Close]
BLAST of Cucsa.148450 vs. TAIR10
Match: AT1G05205.1 (AT1G05205.1 unknown protein)

HSP 1 Score: 160.2 bits (404), Expect = 5.7e-40
Identity = 73/87 (83.91%), Postives = 79/87 (90.80%), Query Frame = 1 

Query: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSE RPV RRESPWG+PEG  R+PKAHRCNDR EDVIQA FEGNPFKTVPGPFKLF++CM
Sbjct: 1  MSETRPVPRRESPWGLPEGH-REPKAHRCNDRVEDVIQALFEGNPFKTVPGPFKLFYRCM 60

Query: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 88
          RSKPGEEPTEP+ YLD +PPKREVKLE
Sbjct: 61 RSKPGEEPTEPFKYLDLEPPKREVKLE 86

[Close]
BLAST of Cucsa.148450 vs. NCBI nr
Match: gi|778723814|ref|XP_011658703.1| (PREDICTED: uncharacterized protein LOC105436076 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-47
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 88
          RSKPGEEPTEPYTYLDFDPPKREVKLE
Sbjct: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 87

[Close]
BLAST of Cucsa.148450 vs. NCBI nr
Match: gi|700188298|gb|KGN43531.1| (hypothetical protein Csa_7G044220 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-47
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1 

Query: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 88
          RSKPGEEPTEPYTYLDFDPPKREVKLE
Sbjct: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 87

[Close]
BLAST of Cucsa.148450 vs. NCBI nr
Match: gi|659110822|ref|XP_008455429.1| (PREDICTED: uncharacterized protein LOC103495588 isoform X4 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-45
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 1 

Query: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEPRPVKRRESPWGMPEG+DRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEPRPVKRRESPWGMPEGEDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 88
          RSKPGEEPTEP+TYLDFDPPKREVK E
Sbjct: 61 RSKPGEEPTEPFTYLDFDPPKREVKPE 87

[Close]
BLAST of Cucsa.148450 vs. NCBI nr
Match: gi|659110824|ref|XP_008455430.1| (PREDICTED: uncharacterized protein LOC103495588 isoform X5 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-45
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 1 

Query: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEPRPVKRRESPWGMPEG+DRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEPRPVKRRESPWGMPEGEDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 88
          RSKPGEEPTEP+TYLDFDPPKREVK E
Sbjct: 61 RSKPGEEPTEPFTYLDFDPPKREVKPE 87

[Close]
BLAST of Cucsa.148450 vs. NCBI nr
Match: gi|659110820|ref|XP_008455428.1| (PREDICTED: uncharacterized protein LOC103495588 isoform X3 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-45
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 1 

Query: 1  MSEPRPVKRRESPWGMPEGDDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60
          MSEPRPVKRRESPWGMPEG+DRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM
Sbjct: 1  MSEPRPVKRRESPWGMPEGEDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWQCM 60

Query: 61 RSKPGEEPTEPYTYLDFDPPKREVKLE 88
          RSKPGEEPTEP+TYLDFDPPKREVK E
Sbjct: 61 RSKPGEEPTEPFTYLDFDPPKREVKPE 87

The following BLAST results are available for this feature:
BLAST of Cucsa.148450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6V3_CUCSA2.4e-47100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044220 PE=4 SV=1[more]
W9S2L6_9ROSA1.4e-4293.02Uncharacterized protein OS=Morus notabilis GN=L484_018248 PE=4 SV=1[more]
A0A0B0PQK5_GOSAR4.0e-4290.80Hexokinase-1 OS=Gossypium arboreum GN=F383_07909 PE=4 SV=1[more]
A0A0D2QNI2_GOSRA4.0e-4290.80Uncharacterized protein OS=Gossypium raimondii GN=B456_003G051600 PE=4 SV=1[more]
A0A067DSY1_CITSI6.8e-4290.80Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034327mg PE=4 SV=1[more]
BLAST of Cucsa.148450 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G05205.15.7e-4083.91 unknown protein[more]
BLAST of Cucsa.148450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778723814|ref|XP_011658703.1|3.5e-47100.00PREDICTED: uncharacterized protein LOC105436076 [Cucumis sativus][more]
gi|700188298|gb|KGN43531.1|3.5e-47100.00hypothetical protein Csa_7G044220 [Cucumis sativus][more]
gi|659110822|ref|XP_008455429.1|1.9e-4596.55PREDICTED: uncharacterized protein LOC103495588 isoform X4 [Cucumis melo][more]
gi|659110824|ref|XP_008455430.1|1.9e-4596.55PREDICTED: uncharacterized protein LOC103495588 isoform X5 [Cucumis melo][more]
gi|659110820|ref|XP_008455428.1|1.9e-4596.55PREDICTED: uncharacterized protein LOC103495588 isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016301 kinase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.148450.1Cucsa.148450.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36706FAMILY NOT NAMEDcoord: 1..87
score: 1.3
NoneNo IPR availablePANTHERPTHR36706:SF1SUBFAMILY NOT NAMEDcoord: 1..87
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.148450Cla007675Watermelon (97103) v1cgywmB262
Cucsa.148450Csa7G044220Cucumber (Chinese Long) v2cgycuB215
Cucsa.148450MELO3C018811Melon (DHL92) v3.5.1cgymeB248
Cucsa.148450ClCG02G001860Watermelon (Charleston Gray)cgywcgB248
Cucsa.148450CSPI07G03800Wild cucumber (PI 183967)cgycpiB220
Cucsa.148450CmaCh11G018300Cucurbita maxima (Rimu)cgycmaB0405
Cucsa.148450CmoCh11G019050Cucurbita moschata (Rifu)cgycmoB0404
Cucsa.148450Lsi11G014600Bottle gourd (USVL1VR-Ls)cgylsiB237
Cucsa.148450Cp4.1LG04g03420Cucurbita pepo (Zucchini)cgycpeB0395
Cucsa.148450MELO3C018811.2Melon (DHL92) v3.6.1cgymedB246
Cucsa.148450CsaV3_7G003680Cucumber (Chinese Long) v3cgycucB226
Cucsa.148450Cla97C02G028280Watermelon (97103) v2cgywmbB248
Cucsa.148450Bhi05G001168Wax gourdcgywgoB287
Cucsa.148450Carg19074Silver-seed gourdcarcgyB0810
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.148450Wax gourdcgywgoB291
Cucsa.148450Wax gourdcgywgoB290
Cucsa.148450Cucumber (Gy14) v1cgycgyB005
Cucsa.148450Cucumber (Gy14) v1cgycgyB022
Cucsa.148450Cucumber (Gy14) v1cgycgyB030
Cucsa.148450Cucurbita maxima (Rimu)cgycmaB0406
Cucsa.148450Cucurbita maxima (Rimu)cgycmaB0407
Cucsa.148450Cucurbita maxima (Rimu)cgycmaB0408
Cucsa.148450Cucurbita maxima (Rimu)cgycmaB0409
Cucsa.148450Cucurbita moschata (Rifu)cgycmoB0407
Cucsa.148450Cucurbita moschata (Rifu)cgycmoB0408
Cucsa.148450Cucurbita moschata (Rifu)cgycmoB0409
Cucsa.148450Wild cucumber (PI 183967)cgycpiB217
Cucsa.148450Wild cucumber (PI 183967)cgycpiB219
Cucsa.148450Cucumber (Chinese Long) v2cgycuB213
Cucsa.148450Melon (DHL92) v3.5.1cgymeB246
Cucsa.148450Melon (DHL92) v3.5.1cgymeB249
Cucsa.148450Watermelon (Charleston Gray)cgywcgB247
Cucsa.148450Watermelon (Charleston Gray)cgywcgB249
Cucsa.148450Watermelon (97103) v1cgywmB259
Cucsa.148450Watermelon (97103) v1cgywmB257
Cucsa.148450Watermelon (97103) v1cgywmB263
Cucsa.148450Cucurbita pepo (Zucchini)cgycpeB0392
Cucsa.148450Cucurbita pepo (Zucchini)cgycpeB0393
Cucsa.148450Cucurbita pepo (Zucchini)cgycpeB0396
Cucsa.148450Bottle gourd (USVL1VR-Ls)cgylsiB236
Cucsa.148450Bottle gourd (USVL1VR-Ls)cgylsiB238
Cucsa.148450Melon (DHL92) v3.6.1cgymedB243
Cucsa.148450Melon (DHL92) v3.6.1cgymedB247
Cucsa.148450Silver-seed gourdcarcgyB0035
Cucsa.148450Silver-seed gourdcarcgyB0395
Cucsa.148450Silver-seed gourdcarcgyB0717
Cucsa.148450Silver-seed gourdcarcgyB0997
Cucsa.148450Cucumber (Chinese Long) v3cgycucB223
Cucsa.148450Cucumber (Chinese Long) v3cgycucB225
Cucsa.148450Watermelon (97103) v2cgywmbB247
Cucsa.148450Watermelon (97103) v2cgywmbB249