Cucsa.144300 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.144300
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related
Location	scaffold01080 : 690897 .. 691561 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACGATTGGGTCATTCCTTTAAAACAGATCAAATCATGTTGATGCAAGAAGGTCGAATGTTGATTGAATATGTTACAATGAATGTTATTGTTATTAGAAAGATTCTCAAGAAATATGGTAAGGTACATAACTTTGTAAATTAAAAGAACTTTAAGTTGAAAATATGAGTTGTACATATGGAGCTTTTGCAATCCCCTTGGCTAATGGAATTGGATGTTTTTtGTTTGAATTTTAAAGGATTCAAGGATGGAAACTATCCTTCAGAATTCTCCACTCACTTTTCCTTCAATGTCGATGCGGCACCGACAATGACATTGATGCTTCTGAATTCTATAAAGTTGGAATATGATCTTACTTGCCCTATATGCTTGGAATTTGATCTATATGCTTTGGATTGGTGGACATCTCTTATGAAAATCATGTGTTTGTTTACCTGCTTCAGTGATGATTTGCGTTGGACCAAAGGCTACTAGTTGAGAATCTAAATGTCTGGTTTATAGAGAGGTTGAAGTATATTTTAAAGCATTGCACAAAATTAAACTGAATATGCTATTGAAAAAAATGTGTAAAGGTTACTGAAGGAGAGGCTAGTGGCAGAACGAGCTAGAGTGTTGAAACAAACCAAAGATTTATGGGATTCACAAACTAGATATATGGTCAG

mRNA sequence

ATGACACGATTGGGTCATTCCTTTAAAACAGATCAAATCATGTTGATGCAAGAAGGTCGAATGTTGATTGAATATGTTACAATGAATGTTATTGTTATTAGAAAGATTCTCAAGAAATATGGTAAGCTTTTGCAATCCCCTTGGCTAATGGAATTGGATGTTTTTTGTTTGAATTTTAAAGGATTCAAGGATGGAAACTATCCTTCAGAATTCTCCACTCACTTTTCCTTCAATGTCGATGCGGCACCGACAATGACATTGATGCTTCTGAATTCTATAAAGTTGGAATATGATCTTACTTGCCCTATATGCTTGGAATTTGATCTATATGCTTTGGATTGGTTACTGAAGGAGAGGCTAGTGGCAGAACGAGCTAGAGTGTTGAAACAAACCAAAGATTTATGGGATTCACAAACTAGATATATGGTCAG

Coding sequence (CDS)

ATGACACGATTGGGTCATTCCTTTAAAACAGATCAAATCATGTTGATGCAAGAAGGTCGAATGTTGATTGAATATGTTACAATGAATGTTATTGTTATTAGAAAGATTCTCAAGAAATATGGTAAGCTTTTGCAATCCCCTTGGCTAATGGAATTGGATGTTTTTtGTTTGAATTTTAAAGGATTCAAGGATGGAAACTATCCTTCAGAATTCTCCACTCACTTTTCCTTCAATGTCGATGCGGCACCGACAATGACATTGATGCTTCTGAATTCTATAAAGTTGGAATATGATCTTACTTGCCCTATATGCTTGGAATTTGATCTATATGCTTTGGATTGGTTACTGAAGGAGAGGCTAGTGGCAGAACGAGCTAGAGTGTTGAAACAAACCAAAGATTTATGGGATTCACAAACTAGATATATGGTCAG

Protein sequence

MTRLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGKLLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLTCPICLEFDLYALDWLLKERLVAERARVLKQTKDLWDSQTRYMVX

Homology

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BLAST of Cucsa.144300 vs. Swiss-Prot
Match: BAH1L_ARATH (Probable E3 ubiquitin-protein ligase BAH1-like OS=Arabidopsis thaliana GN=RF178 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.0e-19
Identity = 61/135 (45.19%), Postives = 76/135 (56.30%), Query Frame = 1


Query: 1   MTRLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK------------------ 60
           M RL   F  ++  L+QEG++LI+Y+TMN I IRKILKKY K                  
Sbjct: 110 MIRLRRCFTDEKQALVQEGQILIQYITMNAIAIRKILKKYDKVHSSENGKNFKLKMRAER 169

Query: 61  --LLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNV-DAAPTMTLMLLNSIKLEYDL 113
             LL SPWL+EL  F LN      GN+ + F      N+ +  P + LML NSI+LEYDL
Sbjct: 170 IELLHSPWLIELGAFYLNSGLDNVGNFKNSFGRVACENLNEDQPVLKLMLPNSIELEYDL 229

HSP 2 Score: 39.7 bits (91), Expect = 3.3e-02
Identity = 27/86 (31.40%), Postives = 42/86 (48.84%), Query Frame = 1


Query: 74  HFSFNVDAAPTMTLMLLNSIKLE-YDLTCPICLEFDLYA-------LDWLLK-------- 133
           H   N  A    ++++   IK       CPIC E  +YA       L  LLK        
Sbjct: 248 HIFCNSCACSAASVLIFQGIKAAPRHSKCPICREAGVYAEAVHMIELHLLLKTRSKEYWK 307

Query: 134 ERLVAERARVLKQTKDLWDSQTRYMV 144
           ER++ ER+ ++KQ+K  W+ QT++M+
Sbjct: 308 ERMMNERSEMVKQSKMFWNEQTKHMI 333

[Close]

BLAST of Cucsa.144300 vs. Swiss-Prot
Match: BAHL1_ORYSI (Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. indica GN=OsI_12825 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-18
Identity = 60/137 (43.80%), Postives = 77/137 (56.20%), Query Frame = 1


Query: 3   RLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK-------------------- 62
           R+   F  DQ +++QEGRML+ YVTMN I IRKILKKY K                    
Sbjct: 112 RVRQCFIDDQQIMVQEGRMLLNYVTMNAIAIRKILKKYDKIHGSVSGRDFKSKMQTDHIE 171

Query: 63  LLQSPWLMELDVFCLNFKGF----KDGNYPSEFSTHFSFNV-DAAPTMTLMLLNSIKLEY 113
           LLQSPWL+EL  F LN          G   +EF  +FS ++ +A P MT+ +  ++K EY
Sbjct: 172 LLQSPWLIELGAFHLNCNSSDIDETVGFLKNEFFKNFSCDLTEARPLMTMAISETMKYEY 231

[Close]

BLAST of Cucsa.144300 vs. Swiss-Prot
Match: BAHL1_ORYSJ (Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. japonica GN=Os03g0650900 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-18
Identity = 60/137 (43.80%), Postives = 77/137 (56.20%), Query Frame = 1


Query: 3   RLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK-------------------- 62
           R+   F  DQ +++QEGRML+ YVTMN I IRKILKKY K                    
Sbjct: 112 RVRQCFIDDQQIMVQEGRMLLNYVTMNAIAIRKILKKYDKIHGSVSGRDFKSKMQTDHIE 171

Query: 63  LLQSPWLMELDVFCLNFKGF----KDGNYPSEFSTHFSFNV-DAAPTMTLMLLNSIKLEY 113
           LLQSPWL+EL  F LN          G   +EF  +FS ++ +A P MT+ +  ++K EY
Sbjct: 172 LLQSPWLIELGAFHLNCNSSDIDETVGFLKNEFFKNFSCDLTEARPLMTMAISETMKYEY 231

[Close]

BLAST of Cucsa.144300 vs. Swiss-Prot
Match: BAH1_ARATH (E3 ubiquitin-protein ligase BAH1 OS=Arabidopsis thaliana GN=BAH1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.6e-11
Identity = 47/132 (35.61%), Postives = 65/132 (49.24%), Query Frame = 1


Query: 5   GHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK--------------------LL 64
           G+S K D   L+QEG+ L+ Y  +N + IRKILKKY K                    +L
Sbjct: 105 GNSRKKDHHGLIQEGKDLVNYALINAVAIRKILKKYDKIHESRQGQAFKTQVQKMRIEIL 164

Query: 65  QSPWLMELDVFCLNFKGFKDGNYPSEFS----THFSFN------VDAAPTMTLMLLNSIK 107
           QSPWL EL  F +N K  K  +  +  S     H  F+       D  P ++  L +S+K
Sbjct: 165 QSPWLCELMAFHINLKESKKESGATITSPPPPVHALFDGCALTFDDGKPLLSCELSDSVK 224

[Close]

BLAST of Cucsa.144300 vs. TrEMBL
Match: A0A0A0LBP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G790460 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 7.2e-41
Identity = 94/134 (70.15%), Postives = 99/134 (73.88%), Query Frame = 1


Query: 1   MTRLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK------------------ 60
           M+RL H FKTDQ  L+QEGRMLIEYVTMN I IRKILKKY K                  
Sbjct: 97  MSRLVHCFKTDQTTLIQEGRMLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLRMRAEH 156

Query: 61  --LLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLT 113
             LLQSPWL+EL  FCLNFKG KDG+YPS FSTHFSFNVDAAPTMTLML +SIKLEYDLT
Sbjct: 157 MELLQSPWLIELGAFCLNFKGSKDGDYPSGFSTHFSFNVDAAPTMTLMLPDSIKLEYDLT 216

[Close]

BLAST of Cucsa.144300 vs. TrEMBL
Match: V4S6Y8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012301mg PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-23
Identity = 69/133 (51.88%), Postives = 83/133 (62.41%), Query Frame = 1


Query: 3   RLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK-------------------- 62
           R+   FK DQ  +++EGR+LIEY+ MN I IRKILKKY K                    
Sbjct: 82  RIRQCFKNDQTAMIEEGRVLIEYIIMNAIAIRKILKKYDKVHKSVNGKNFKSKMRAEHIE 141

Query: 63  LLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNVDAA-PTMTLMLLNSIKLEYDLTC 113
           LLQSPWL+EL  F LNF G   G   SEFS HFSF+ +A+ P MTL L +SIKLEYDLTC
Sbjct: 142 LLQSPWLIELGAFYLNFNGLNCG-ASSEFSGHFSFDFNASRPVMTLALPSSIKLEYDLTC 201

[Close]

BLAST of Cucsa.144300 vs. TrEMBL
Match: V4S6Y8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012301mg PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 5.1e-02
Identity = 30/82 (36.59%), Postives = 42/82 (51.22%), Query Frame = 1


Query: 74  HFSFNVDAAPTMTLMLLNSIK-LEYDLTCPICLEFDLYA-------LDWLL--------K 133
           H    + A    ++M+   +K    D  CPIC E  +YA       LD L+        K
Sbjct: 217 HLFCKLCACSAASVMVFEGLKSASPDSKCPICREAGVYAKAVHMLELDLLVKRRFKEYWK 276

Query: 134 ERLVAERARVLKQTKDLWDSQT 140
           ERL+AERA ++KQ+K+ WD QT
Sbjct: 277 ERLIAERAEMVKQSKEYWDLQT 298

HSP 2 Score: 115.5 bits (288), Expect = 5.2e-23
Identity = 71/133 (53.38%), Postives = 80/133 (60.15%), Query Frame = 1


Query: 3   RLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK-------------------- 62
           RL   FK DQ  L++EG MLIEY+TMN I IRKILKKY K                    
Sbjct: 43  RLRQCFKNDQQALVEEGLMLIEYITMNAIAIRKILKKYDKVHSSANGKNFKSKLRAEHLE 102

Query: 63  LLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNVD-AAPTMTLMLLNSIKLEYDLTC 113
           LLQSPWL+EL    LNFKG  DG    +FS  FS N+D   P MTLML +SIKLEY+L C
Sbjct: 103 LLQSPWLIELGALSLNFKGSDDGEAFIQFSGSFSCNLDEMEPVMTLMLPHSIKLEYNLKC 162

[Close]

BLAST of Cucsa.144300 vs. TrEMBL
Match: A0A0D2PJX8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G362900 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.1e-03
Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 1


Query: 81  AAPTMTLMLLNSIKLEY-DLTCPICLEFDLYA-------LDWLLK--------ERLVAER 140
           A    ++M+   +K    D  CPIC E  +YA       LD L+K        ER +AER
Sbjct: 186 ACSAASVMIFQGLKASSPDSKCPICREAGVYANAVHMLELDLLIKKRHKDYWKERAIAER 245

Query: 141 ARVLKQTKDLWDSQTRYMV 144
           A ++KQ+K+ W+SQT+Y+V
Sbjct: 246 AEMVKQSKEYWESQTKYVV 264

HSP 2 Score: 115.5 bits (288), Expect = 5.2e-23
Identity = 71/133 (53.38%), Postives = 80/133 (60.15%), Query Frame = 1


Query: 3   RLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK-------------------- 62
           RL   FK DQ  L++EG MLIEY+TMN I IRKILKKY K                    
Sbjct: 116 RLRQCFKNDQQALVEEGLMLIEYITMNAIAIRKILKKYDKVHSSANGKNFKSKLRAEHLE 175

Query: 63  LLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNVD-AAPTMTLMLLNSIKLEYDLTC 113
           LLQSPWL+EL    LNFKG  DG    +FS  FS N+D   P MTLML +SIKLEY+L C
Sbjct: 176 LLQSPWLIELGALSLNFKGSDDGEAFIQFSGSFSCNLDEMEPVMTLMLPHSIKLEYNLKC 235

[Close]

BLAST of Cucsa.144300 vs. TrEMBL
Match: A0A0D2R4Y3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G362900 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.1e-03
Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 1


Query: 81  AAPTMTLMLLNSIKLEY-DLTCPICLEFDLYA-------LDWLLK--------ERLVAER 140
           A    ++M+   +K    D  CPIC E  +YA       LD L+K        ER +AER
Sbjct: 259 ACSAASVMIFQGLKASSPDSKCPICREAGVYANAVHMLELDLLIKKRHKDYWKERAIAER 318

Query: 141 ARVLKQTKDLWDSQTRYMV 144
           A ++KQ+K+ W+SQT+Y+V
Sbjct: 319 AEMVKQSKEYWESQTKYVV 337

HSP 2 Score: 115.2 bits (287), Expect = 6.8e-23
Identity = 69/133 (51.88%), Postives = 83/133 (62.41%), Query Frame = 1


Query: 3   RLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK-------------------- 62
           R+   FK DQ  +++EGR+LIEY+ MN I IRKILKKY K                    
Sbjct: 116 RIRQCFKNDQTAMIEEGRVLIEYIIMNAIAIRKILKKYDKVHKSVNGKNFKSKMRAEHIE 175

Query: 63  LLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNVDAA-PTMTLMLLNSIKLEYDLTC 113
           LLQSPWL+EL  F LNF G   G   SEFS HFSF+ +A+ P MTL L +SIKLEYDLTC
Sbjct: 176 LLQSPWLIELGGFYLNFNGLNCG-ASSEFSGHFSFDFNASRPVMTLALPSSIKLEYDLTC 235

[Close]

BLAST of Cucsa.144300 vs. TAIR10
Match: AT2G38920.1 (AT2G38920.1 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related)

HSP 1 Score: 95.5 bits (236), Expect = 2.8e-20
Identity = 61/135 (45.19%), Postives = 76/135 (56.30%), Query Frame = 1


Query: 1   MTRLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK------------------ 60
           M RL   F  ++  L+QEG++LI+Y+TMN I IRKILKKY K                  
Sbjct: 110 MIRLRRCFTDEKQALVQEGQILIQYITMNAIAIRKILKKYDKVHSSENGKNFKLKMRAER 169

Query: 61  --LLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNV-DAAPTMTLMLLNSIKLEYDL 113
             LL SPWL+EL  F LN      GN+ + F      N+ +  P + LML NSI+LEYDL
Sbjct: 170 IELLHSPWLIELGAFYLNSGLDNVGNFKNSFGRVACENLNEDQPVLKLMLPNSIELEYDL 229

HSP 2 Score: 39.7 bits (91), Expect = 1.8e-03
Identity = 27/86 (31.40%), Postives = 42/86 (48.84%), Query Frame = 1


Query: 74  HFSFNVDAAPTMTLMLLNSIKLE-YDLTCPICLEFDLYA-------LDWLLK-------- 133
           H   N  A    ++++   IK       CPIC E  +YA       L  LLK        
Sbjct: 248 HIFCNSCACSAASVLIFQGIKAAPRHSKCPICREAGVYAEAVHMIELHLLLKTRSKEYWK 307

Query: 134 ERLVAERARVLKQTKDLWDSQTRYMV 144
           ER++ ER+ ++KQ+K  W+ QT++M+
Sbjct: 308 ERMMNERSEMVKQSKMFWNEQTKHMI 333

[Close]

BLAST of Cucsa.144300 vs. TAIR10
Match: AT1G02860.1 (AT1G02860.1 SPX (SYG1/Pho81/XPR1) domain-containing protein)

HSP 1 Score: 68.6 bits (166), Expect = 3.7e-12
Identity = 47/132 (35.61%), Postives = 65/132 (49.24%), Query Frame = 1


Query: 5   GHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK--------------------LL 64
           G+S K D   L+QEG+ L+ Y  +N + IRKILKKY K                    +L
Sbjct: 105 GNSRKKDHHGLIQEGKDLVNYALINAVAIRKILKKYDKIHESRQGQAFKTQVQKMRIEIL 164

Query: 65  QSPWLMELDVFCLNFKGFKDGNYPSEFS----THFSFN------VDAAPTMTLMLLNSIK 107
           QSPWL EL  F +N K  K  +  +  S     H  F+       D  P ++  L +S+K
Sbjct: 165 QSPWLCELMAFHINLKESKKESGATITSPPPPVHALFDGCALTFDDGKPLLSCELSDSVK 224

[Close]

BLAST of Cucsa.144300 vs. NCBI nr
Match: gi|778684598|ref|XP_004136542.2| (PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like [Cucumis sativus])

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-40
Identity = 94/134 (70.15%), Postives = 99/134 (73.88%), Query Frame = 1


Query: 1   MTRLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK------------------ 60
           M+RL H FKTDQ  L+QEGRMLIEYVTMN I IRKILKKY K                  
Sbjct: 97  MSRLVHCFKTDQTTLIQEGRMLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLRMRAEH 156

Query: 61  --LLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLT 113
             LLQSPWL+EL  FCLNFKG KDG+YPS FSTHFSFNVDAAPTMTLML +SIKLEYDLT
Sbjct: 157 MELLQSPWLIELGAFCLNFKGSKDGDYPSGFSTHFSFNVDAAPTMTLMLPDSIKLEYDLT 216

[Close]

BLAST of Cucsa.144300 vs. NCBI nr
Match: gi|778684598|ref|XP_004136542.2| (PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 5.4e-05
Identity = 33/58 (56.90%), Postives = 35/58 (60.34%), Query Frame = 1


Query: 101 CPICLEFDLYA-------LDWLLK--------ERLVAERARVLKQTKDLWDSQTRYMV 144
           CP+C E   Y        LD LLK        ERLV ERARVLKQTKD WDSQTRY+V
Sbjct: 262 CPVCRETGEYPKALHMVELDMLLKRRCKDYWKERLVEERARVLKQTKDFWDSQTRYVV 319

HSP 2 Score: 174.9 bits (442), Expect = 1.0e-40
Identity = 94/134 (70.15%), Postives = 99/134 (73.88%), Query Frame = 1


Query: 1   MTRLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK------------------ 60
           M+RL H FKTDQ  L+QEGRMLIEYVTMN I IRKILKKY K                  
Sbjct: 97  MSRLVHCFKTDQTTLIQEGRMLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLRMRAEH 156

Query: 61  --LLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLT 113
             LLQSPWL+EL  FCLNFKG KDG+YPS FSTHFSFNVDAAPTMTLML +SIKLEYDLT
Sbjct: 157 MELLQSPWLIELGAFCLNFKGSKDGDYPSGFSTHFSFNVDAAPTMTLMLPDSIKLEYDLT 216

[Close]

BLAST of Cucsa.144300 vs. NCBI nr
Match: gi|659084624|ref|XP_008442986.1| (PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 4.4e-39
Identity = 91/134 (67.91%), Postives = 97/134 (72.39%), Query Frame = 1


Query: 1   MTRLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK------------------ 60
           MTRL H FK+DQ  L+QEGRMLIEYVTMN I IRKILKKY K                  
Sbjct: 97  MTRLVHCFKSDQTTLIQEGRMLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLKMRAEH 156

Query: 61  --LLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLT 113
             LLQSPWL+EL  FCLNFKG +DG+YPS FSTHF FNVD APTMTLML +SIKLEYDLT
Sbjct: 157 MELLQSPWLIELGAFCLNFKGSEDGDYPSGFSTHFFFNVDVAPTMTLMLPDSIKLEYDLT 216

[Close]

BLAST of Cucsa.144300 vs. NCBI nr
Match: gi|659084624|ref|XP_008442986.1| (PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis melo])

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05
Identity = 33/58 (56.90%), Postives = 36/58 (62.07%), Query Frame = 1


Query: 101 CPICLEFDLYA-------LDWLLK--------ERLVAERARVLKQTKDLWDSQTRYMV 144
           CP+C E  +Y        LD LLK        ERLV ERARVLKQTKD WDSQTRY+V
Sbjct: 262 CPVCREAGVYPKALHMVELDMLLKRRCKDYWKERLVEERARVLKQTKDFWDSQTRYVV 319

HSP 2 Score: 169.5 bits (428), Expect = 4.4e-39
Identity = 91/134 (67.91%), Postives = 97/134 (72.39%), Query Frame = 1


Query: 1   MTRLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK------------------ 60
           MTRL H FK+DQ  L+QEGRMLIEYVTMN I IRKILKKY K                  
Sbjct: 97  MTRLVHCFKSDQTTLIQEGRMLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLKMRAEH 156

Query: 61  --LLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLT 113
             LLQSPWL+EL  FCLNFKG +DG+YPS FSTHF FNVD APTMTLML +SIKLEYDLT
Sbjct: 157 MELLQSPWLIELGAFCLNFKGSEDGDYPSGFSTHFFFNVDVAPTMTLMLPDSIKLEYDLT 216

[Close]

BLAST of Cucsa.144300 vs. NCBI nr
Match: gi|659084620|ref|XP_008442983.1| (PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cucumis melo])

HSP 1 Score: 52.0 bits (123), Expect = 1.0e-03
Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 1


Query: 117 KERLVAERARVLKQTKDLWDSQTRYMV 144
           KERLV ERARVLKQTKD WDSQTRY+V
Sbjct: 325 KERLVEERARVLKQTKDFWDSQTRYVV 351

HSP 2 Score: 169.5 bits (428), Expect = 4.4e-39
Identity = 91/134 (67.91%), Postives = 97/134 (72.39%), Query Frame = 1


Query: 1   MTRLGHSFKTDQIMLMQEGRMLIEYVTMNVIVIRKILKKYGK------------------ 60
           MTRL H FK+DQ  L+QEGRMLIEYVTMN I IRKILKKY K                  
Sbjct: 97  MTRLVHCFKSDQTTLIQEGRMLIEYVTMNAIAIRKILKKYDKVHSSVNGKNFKLKMRAEH 156

Query: 61  --LLQSPWLMELDVFCLNFKGFKDGNYPSEFSTHFSFNVDAAPTMTLMLLNSIKLEYDLT 113
             LLQSPWL+EL  FCLNFKG +DG+YPS FSTHF FNVD APTMTLML +SIKLEYDLT
Sbjct: 157 MELLQSPWLIELGAFCLNFKGSEDGDYPSGFSTHFFFNVDVAPTMTLMLPDSIKLEYDLT 216

The following BLAST results are available for this feature:

BLAST of Cucsa.144300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BAH1L_ARATH	5.0e-19	45.19	Probable E3 ubiquitin-protein ligase BAH1-like OS=Arabidopsis thaliana GN=RF178 ...	[more]
BAHL1_ORYSI	3.2e-18	43.80	Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. indica G...	[more]
BAHL1_ORYSJ	3.2e-18	43.80	Probable E3 ubiquitin-protein ligase BAH1-like 1 OS=Oryza sativa subsp. japonica...	[more]
BAH1_ARATH	6.6e-11	35.61	E3 ubiquitin-protein ligase BAH1 OS=Arabidopsis thaliana GN=BAH1 PE=1 SV=1	[more]

BLAST of Cucsa.144300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBP6_CUCSA	7.2e-41	70.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G790460 PE=4 SV=1	[more]
V4S6Y8_9ROSI	3.1e-23	51.88	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012301mg PE=4 SV=1	[more]
V4S6Y8_9ROSI	5.1e-02	36.59	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012301mg PE=4 SV=1	[more]
A0A0D2PJX8_GOSRA	2.1e-03	37.97	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G362900 PE=4 SV=1	[more]
A0A0D2R4Y3_GOSRA	2.1e-03	37.97	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G362900 PE=4 SV=1	[more]

BLAST of Cucsa.144300 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38920.1	2.8e-20	45.19	SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4...	[more]
AT1G02860.1	3.7e-12	35.61	SPX (SYG1/Pho81/XPR1) domain-containing protein	[more]

BLAST of Cucsa.144300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778684598\|ref\|XP_004136542.2\|	1.0e-40	70.15	PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like [Cucumis sativus]	[more]
gi\|778684598\|ref\|XP_004136542.2\|	5.4e-05	56.90	PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like [Cucumis sativus]	[more]
gi\|659084624\|ref\|XP_008442986.1\|	4.4e-39	67.91	PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis me...	[more]
gi\|659084624\|ref\|XP_008442986.1\|	1.9e-05	56.90	PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X2 [Cucumis me...	[more]
gi\|659084620\|ref\|XP_008442983.1\|	1.0e-03	88.89	PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like isoform X1 [Cucumis me...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.144300.1	Cucsa.144300.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.144300	CSPI05G11160	Wild cucumber (PI 183967)	cgycpiB212
Cucsa.144300	CsaV3_5G010580	Cucumber (Chinese Long) v3	cgycucB217

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.144300	Silver-seed gourd	carcgyB0745
Cucsa.144300	Silver-seed gourd	carcgyB1028
Cucsa.144300	Cucumber (Chinese Long) v3	cgycucB218
Cucsa.144300	Watermelon (97103) v2	cgywmbB243
Cucsa.144300	Watermelon (97103) v2	cgywmbB244
Cucsa.144300	Wax gourd	cgywgoB283
Cucsa.144300	Cucurbita maxima (Rimu)	cgycmaB0400
Cucsa.144300	Cucurbita maxima (Rimu)	cgycmaB0401
Cucsa.144300	Cucurbita moschata (Rifu)	cgycmoB0400
Cucsa.144300	Cucurbita moschata (Rifu)	cgycmoB0401
Cucsa.144300	Wild cucumber (PI 183967)	cgycpiB213
Cucsa.144300	Cucumber (Chinese Long) v2	cgycuB209
Cucsa.144300	Watermelon (Charleston Gray)	cgywcgB243
Cucsa.144300	Watermelon (Charleston Gray)	cgywcgB244
Cucsa.144300	Watermelon (97103) v1	cgywmB253
Cucsa.144300	Cucurbita pepo (Zucchini)	cgycpeB0387
Cucsa.144300	Cucurbita pepo (Zucchini)	cgycpeB0388
Cucsa.144300	Bottle gourd (USVL1VR-Ls)	cgylsiB231
Cucsa.144300	Bottle gourd (USVL1VR-Ls)	cgylsiB232