Cucsa.142860 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGATTATATCACTTGATGAGTGGTAGAAGTAGTGTTTCTGCTCTGTGGCTAGCTCTTTCTGGCTGTGCTAGGTCCAATGGAGTGCTTAATGCTGGTTACATCTGTTTTCTGACTATGCATTGGGCTTATGATGCTCTTTTTCTGAAGAAATGTATCCGTGTAAGTATCCTTTCTAATTAATTGATAATGAGTTTTATAATGTCTGTTTGTTAAGTTATCTTGGTTGAGAAGTAATGCATTTCTCTAATTGTTTGTGTTTCTGATTTATTGGTCAAATTTCTCTTTTGAGTTTTCCTTTTGTGATGCAGATTTCTTGTGCTTTTATACAAGACAGAATCGAGTTGTTTTGTAATTATTCTCTTTTAGATATTGGTAAAAGTTGGAGTATTTTTATGTAAGCTCTTAGGCAATTTTGAGGAGAACTCATCTGCTCTTTTATGCTTCATTTTCTGATGGAGTAGGTCCTTTTACCCTTCTTTTTACTAGGAGATTTCTTTGGAAAGTTGGGCTCTTGATTATTTTGTAGTATATTTGGTCAGAGAGAAATAGAAGAGTTAAGGTCCTTAATCAAAGTGGCTTTATTTAAAAGAAAAAAAAAaTTTAGATAGACAAAATTTCACATTTATTAGAAGAAAAGTACAAGAGACGGTGGACAAAAGCTTCATTTAGGAAGGAACTTAAGAAAAAGCAGTCCTGTATTGTTTAACTATGATAAACAAAAAGGAAGTTGAAGATGTAATGTTCTAACTTTGTTTCATGGTCAGCAATGTAGCATTAATAATAGTTTATTATTTATTCCAGAAGGGACTGCAGGTTCTCATTTCTGGAGCCCTAAACTGTGTCTTTATATTTGCTCCATTCATTGGATTTCAAGCATATGGGTATTACAATATTTGCAGTGGACGGATACCAGAAGAAATGAGGCCATGGTGTAAAGCTAGGGTACCGCTGCTATACAACTTTGTTCAAAGTCACTACTGGTATTGACTTTTTAACTTGCCCAGTATTCCAAACTTTATATCAATATTCTGTAGACCATAGATGACTTCGTAATTATTTTCAAAATCTTTAGATAATCCTGTAATTCTAGGGTTTCTCATATATAAATGTTTGAACTTGAAATAGTTTGGAAGTGTAGGAACTTGTCGACAGAGAGAATTAGGTTACAAGAATCAGTTATTAATCTAACTATCAATTTGAACAACTCAGTATCCCAACTCTAGAGGATACTAATTATACTTTACAAGTGAGAAAAAGAAATTATAAATTTTATCAATGAAGAGAATTTTACAAAGAATGAGTCTGTCAAGACTCGACAGGATAAAGTTTCTTCTCTCTGAAGGAAGAGTTATGAAGAAGAATAGGGTTCCAATCACTGCACAAAAATTCTAAAGGAATCCAATTCATAACATTGCAAATGCAAAGTTATAGACAGCTTCCTAACATCCCCTGATACTGACAGGATGAATATGTTAGATACCTAGATTAGTATAGGGCTAAAGGTAGTTAGTTATGTAGGCAGTTAGATGGTTATAAATAGGAAGTTGGGGAGGGAAGAAAAGGGAGATTAGTTTTGTGGGTAGTTTTTCTGCACTCTTTCTTGTTCTTAGTTAGTTTCTATATTTTCATTTCATATCAAATTTTTTTtGTAATAGTGAGTTTATATCAATTGAACAAGAACACGTTTATTGGTGTTCCATCAGAATAACAATCACATCCTGATGCTATCATACTCATTAAGGAAGCAGTGAGATTATGTGGCTTCCCACGTTCAATTATCTCTAATCGTGACAGGATATTTGTGAGACTTTTGGAATGAATTGTTTAAGATACAAGGAACCCAACTTCAAAAAAACGCCACCTTCCATGTTTAGATGGACGAACTATGTGAGATTGTCAACAAGTGCTAGGAGATCTATGAAGATATTGAAGAAAATGATTTGTAAGAACATCTTTTGAATTTTCTTTtGTTACATGTCAGGAACCATGCGATTTTGGTAAGTTGAAAGGGTGGGATACTTTGGTTGGGTGTGAAGTAGGACCATTTCCTTCTTCATACTTGCATCTCCATTTGAGCCACAACCACAAGATTTGTTTTTGGGATCTCATATTGAGTTATTGTGAGTAAGATTCATAAGAGACTCGTCTTGGAAAGAGCTTTTTCTTGAAAGGTGGTGGATTTACACTCATTCTATTTGCGGAGTTCTCGAAAGAGGTTGCAACGAGATGGTTGAGAAGTTCCATCTCAATCCTTCTTTTTCATGAGAATGAAAGGTTTTTATGGTGAATCGGGATGTGTGCAGTCTTGTGGGACTTCTGGGGAGTGCAGAGCAAAGCTTGAGAGATCGTTGAGTGATGTTTGGTTTATTGCTAGTTCTAACGTTTCTTCATGGGCCTCAAGTCTATTCTTATGTGATAGAAGGCCCTTGTTTtAAATTGTCCACTTTTAAGGAGCTTTACTTTTtGTATCCTCTTGTATTATTTCATTCTCTCTTAATAAATCCTCTGTTATAATCCTCTGTTATTCATTATATATATAGATAGGTAGAGTCTAATTTTAAGAGCTTTATTTTTTtGGGGgTTTTtACAAAAaTAACAAAAAAaTTTATGATAATAGAGTTTATGTCACAACATTTTCTAAATTCTAAATTTGCAAAAGTAGCAAATTTAAAAGTGATGACCTCTGATAGCCATATGATTGTCGTCTGATAGCCTTATGATTACCGTCTAATAGTCGTCTAATATCACTAATTTTACCATATTTGCAATATGCAAAAAATTGATGTCATGAGCTTTTTTTTtCTAAATATTTTTGTCATTTGATGCAATTTCCCTTATTTTTTTATGCTCTTGATTTATTTCATTTCTGCTCAATAAATCCTCTGGTATTCATATAGATAGATAGAATATAACTTCAAGTTTTTTTGGACACTCAAATCGGAAATTAAGGCTCTGGTAGTTTTCAAAGAAGCAGGCGCACAGGAAAAGAAAGCATGTAGATTTAATTGTTTATACAATTGGGAAATATCATTCGATTTTCAGTATTCCTTACAAACTATTGTGAAAAGACAATACGTTAGAAATGTTTACTTTGTTTCAGAAATTCATTATAAACCTCTTTTCAGATTTTATTATTTATATTCTAATTGAAATTGCTATGCTCTTTTTTTAACATCTTGCATACGTCTTTTGGGATGGCAGGGGAGTAGGTTTCTTAAAATACTTTCGATTCGAACAGCTACCAAACTTTCTACTTGCATCCCCAATTTTGTCTTTGGTTTTTTtCTCAATTCTCCACTACGGAAAGTCAAAGACAAAGCTTTTATTCTCGGTGGGTTTCCAACCAATGGATGATGATAGAAATTCTGCTGCCATGCTTTACTTTCCAGAACGTGTTTCAAGGTCAAGCACACCTCATACTACATCTTCCTCTGGGTTACAAGGTAATGCTTATTTTTCAATGGTAATGTAACAAGATTTTGTGTTGTATGAGTAGGTATAAGTTTTGAAATTGAGTAGTATCTTGTCTTGACTTTCCTTGTCATTTTGTTTTGTTGCAATTTTTAAAGCACCTTAAGCTATTATTTCATAGGAAATCAGAATCTTAGACAGAGAAAGAAGATTTTTGTACAGGATCCTGCTGAGCTTGCAGTAGAGGATAAACCGTCCAATGGGTCAGGATACTTTTCTGCTCTTGTACTTCCATTTATCCTACATTTGGGGTTTATGGCTGCCACAGCATTTTTTATCATGCATGTACAGGTTTGTCTCCTCTCCATAATTTGTACTTTTTTCAAAAGAATATGTACATGGTGTGTGCTGAAGAATATCATTTGCTTGCTTTCTGTTATTTCAGCTACGAGTCAGCATTATTGTTTGCATTATAAATCTAGTTTCAATATATATACATATATATATATATATACACATTAGCAGCTGTTGAAGACAACTATCAAGTAATTTTTGAGTTTGGAACCCTCTGGTCCTATGAGGCAATAGTTCTCAAGTTATTCCTTATAAATACCGATAAATAGTCCATATGGTATGAATTGTGTACGAGAATTTTATCAAACCATTAGACTATTTGTGAGATTTTATTAAATCAAATGGATTAAATTCCAATTATAAATCATAGGGACTGAATTCTAAGTTTCTCCAAACGATTCGAACCAAATTTGCAATTTAACCCTAAAACTATGGTTCATGTTGTATGGACATTACATAGTTAATTTTCTATATTTTAGAGAGTAATATTCAGCATAAGCCTCTTCTGTTAGAAGCATAAGTTATTCAAACCCTAGCAAATAGCAAAACAAATCCATAAAAACATTCTAAGTTCCATGTCTTGTTTTTAAGCTTAGTATCTCAGAGTTCAGAATTCAACAGGTTGCAACACGATTTCTCTCTGCAAGCCCTCCTCTCTATTGGTTTGCCTCATACATTACAGTTAAGCGATGGAGATATATTATCTGGGCATACTCTATCGCATATATCCTCCTCGGTAGTCTGCTGTTTTCAAATTTCTACCCATTCACATGATTTGTTGCAGCAAAACAACACTTTAGCTTTGGTATCGAATCATCTTGG TGGATTATATCACTTGATGAGTGGTAGAAGTAGTGTTTCTGCTCTGTGGCTAGCTCTTTCTGGCTGTGCTAGGTCCAATGGAGTGCTTAATGCTGGTTACATCTGTTTTCTGACTATGCATTGGGCTTATGATGCTCTTTTTCTGAAGAAATGTATCCGTAAGGGACTGCAGGTTCTCATTTCTGGAGCCCTAAACTGTGTCTTTATATTTGCTCCATTCATTGGATTTCAAGCATATGGGTATTACAATATTTGCAGTGGACGGATACCAGAAGAAATGAGGCCATGGTGTAAAGCTAGGGTACCGCTGCTATACAACTTTGTTCAAAGTCACTACTGGGGAGTAGGTTTCTTAAAATACTTTCGATTCGAACAGCTACCAAACTTTCTACTTGCATCCCCAATTTTGTCTTTGGTTTTTTTCTCAATTCTCCACTACGGAAAGTCAAAGACAAAGCTTTTATTCTCGGTGGGTTTCCAACCAATGGATGATGATAGAAATTCTGCTGCCATGCTTTACTTTCCAGAACGTGTTTCAAGGTCAAGCACACCTCATACTACATCTTCCTCTGGGTTACAAGGAAATCAGAATCTTAGACAGAGAAAGAAGATTTTTGTACAGGATCCTGCTGAGCTTGCAGTAGAGGATAAACCGTCCAATGGGTCAGGATACTTTTCTGCTCTTGTACTTCCATTTATCCTACATTTGGGGTTTATGGCTGCCACAGCATTTTTTATCATGCATGTACAGGTTGCAACACGATTTCTCTCTGCAAGCCCTCCTCTCTATTGGTTTGCCTCATACATTACAGTTAAGCGATGGAGATATATTATCTGGGCATACTCTATCGCATATATCCTCCTCGGTAGTCTGCTGTTTTCAAATTTCTACCCATTCACATGATTTGTTGCAGCAAAACAACACTTTAGCTTTGGTATCGAATCATCTTGG GGATTATATCACTTGATGAGTGGTAGAAGTAGTGTTTCTGCTCTGTGGCTAGCTCTTTCTGGCTGTGCTAGGTCCAATGGAGTGCTTAATGCTGGTTACATCTGTTTTCTGACTATGCATTGGGCTTATGATGCTCTTTTTCTGAAGAAATGTATCCGTAAGGGACTGCAGGTTCTCATTTCTGGAGCCCTAAACTGTGTCTTTATATTTGCTCCATTCATTGGATTTCAAGCATATGGGTATTACAATATTTGCAGTGGACGGATACCAGAAGAAATGAGGCCATGGTGTAAAGCTAGGGTACCGCTGCTATACAACTTTGTTCAAAGTCACTACTGGGGAGTAGGTTTCTTAAAATACTTTCGATTCGAACAGCTACCAAACTTTCTACTTGCATCCCCAATTTTGTCTTTGGTTTTTTtCTCAATTCTCCACTACGGAAAGTCAAAGACAAAGCTTTTATTCTCGGTGGGTTTCCAACCAATGGATGATGATAGAAATTCTGCTGCCATGCTTTACTTTCCAGAACGTGTTTCAAGGTCAAGCACACCTCATACTACATCTTCCTCTGGGTTACAAGGAAATCAGAATCTTAGACAGAGAAAGAAGATTTTTGTACAGGATCCTGCTGAGCTTGCAGTAGAGGATAAACCGTCCAATGGGTCAGGATACTTTTCTGCTCTTGTACTTCCATTTATCCTACATTTGGGGTTTATGGCTGCCACAGCATTTTTTATCATGCATGTACAGGTTGCAACACGATTTCTCTCTGCAAGCCCTCCTCTCTATTGGTTTGCCTCATACATTACAGTTAAGCGATGGAGATATATTATCTGGGCATACTCTATCGCATATATCCTCCTCGGTAGTCTGCTGTTTTCAAATTTCTACCCATTCACATGA GLYHLMSGRSSVSALWLALSGCARSNGVLNAGYICFLTMHWAYDALFLKKCIRKGLQVLISGALNCVFIFAPFIGFQAYGYYNICSGRIPEEMRPWCKARVPLLYNFVQSHYWGVGFLKYFRFEQLPNFLLASPILSLVFFSILHYGKSKTKLLFSVGFQPMDDDRNSAAMLYFPERVSRSSTPHTTSSSGLQGNQNLRQRKKIFVQDPAELAVEDKPSNGSGYFSALVLPFILHLGFMAATAFFIMHVQVATRFLSASPPLYWFASYITVKRWRYIIWAYSIAYILLGSLLFSNFYPFT*
BLAST of Cucsa.142860 vs. Swiss-Prot
Match: PIGV_MOUSE (GPI mannosyltransferase 2 OS=Mus musculus GN=Pigv PE=2 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 3.4e-17 Identity = 55/183 (30.05%), Postives = 86/183 (46.99%), Query Frame = 1
HSP 2 Score: 40.4 bits (93), Expect = 4.0e-02 Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 1
BLAST of Cucsa.142860 vs. Swiss-Prot
Match: PIGV_RAT (GPI mannosyltransferase 2 OS=Rattus norvegicus GN=Pigv PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 9.8e-17 Identity = 53/180 (29.44%), Postives = 86/180 (47.78%), Query Frame = 1
BLAST of Cucsa.142860 vs. Swiss-Prot
Match: GPI18_GIBZE (GPI mannosyltransferase 2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=GPI18 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.9e-12 Identity = 44/135 (32.59%), Postives = 70/135 (51.85%), Query Frame = 1
BLAST of Cucsa.142860 vs. Swiss-Prot
Match: GPI18_ASPOR (GPI mannosyltransferase 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=gpi18 PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.3e-12 Identity = 43/138 (31.16%), Postives = 71/138 (51.45%), Query Frame = 1
BLAST of Cucsa.142860 vs. Swiss-Prot
Match: PIGV_HUMAN (GPI mannosyltransferase 2 OS=Homo sapiens GN=PIGV PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11 Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 1
HSP 2 Score: 40.4 bits (93), Expect = 4.0e-02 Identity = 18/48 (37.50%), Postives = 28/48 (58.33%), Query Frame = 1
BLAST of Cucsa.142860 vs. TrEMBL
Match: A0A0A0LZG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G604050 PE=4 SV=1) HSP 1 Score: 618.2 bits (1593), Expect = 5.2e-174 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
BLAST of Cucsa.142860 vs. TrEMBL
Match: D7SLG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g00920 PE=4 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 3.9e-105 Identity = 190/307 (61.89%), Postives = 234/307 (76.22%), Query Frame = 1
BLAST of Cucsa.142860 vs. TrEMBL
Match: V4UA18_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015009mg PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 3.3e-104 Identity = 188/308 (61.04%), Postives = 234/308 (75.97%), Query Frame = 1
BLAST of Cucsa.142860 vs. TrEMBL
Match: A0A067FIF9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011059mg PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 3.3e-104 Identity = 188/308 (61.04%), Postives = 234/308 (75.97%), Query Frame = 1
BLAST of Cucsa.142860 vs. TrEMBL
Match: V4KWC4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10007452mg PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 1.3e-103 Identity = 188/306 (61.44%), Postives = 232/306 (75.82%), Query Frame = 1
BLAST of Cucsa.142860 vs. TAIR10
Match: AT1G11880.1 (AT1G11880.1 transferases, transferring hexosyl groups) HSP 1 Score: 366.3 bits (939), Expect = 1.8e-101 Identity = 182/304 (59.87%), Postives = 220/304 (72.37%), Query Frame = 1
BLAST of Cucsa.142860 vs. NCBI nr
Match: gi|449462575|ref|XP_004149016.1| (PREDICTED: GPI mannosyltransferase 2 isoform X1 [Cucumis sativus]) HSP 1 Score: 618.2 bits (1593), Expect = 7.4e-174 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
BLAST of Cucsa.142860 vs. NCBI nr
Match: gi|659100441|ref|XP_008451101.1| (PREDICTED: GPI mannosyltransferase 2 [Cucumis melo]) HSP 1 Score: 593.6 bits (1529), Expect = 2.0e-166 Identity = 291/305 (95.41%), Postives = 293/305 (96.07%), Query Frame = 1
BLAST of Cucsa.142860 vs. NCBI nr
Match: gi|778663489|ref|XP_011660096.1| (PREDICTED: GPI mannosyltransferase 2 isoform X2 [Cucumis sativus]) HSP 1 Score: 402.1 bits (1032), Expect = 8.4e-109 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1
BLAST of Cucsa.142860 vs. NCBI nr
Match: gi|225435692|ref|XP_002283435.1| (PREDICTED: GPI mannosyltransferase 2 [Vitis vinifera]) HSP 1 Score: 389.4 bits (999), Expect = 5.6e-105 Identity = 190/307 (61.89%), Postives = 234/307 (76.22%), Query Frame = 1
BLAST of Cucsa.142860 vs. NCBI nr
Match: gi|567907035|ref|XP_006445831.1| (hypothetical protein CICLE_v10015009mg [Citrus clementina]) HSP 1 Score: 386.3 bits (991), Expect = 4.7e-104 Identity = 188/308 (61.04%), Postives = 234/308 (75.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |