Cucsa.142850 (gene) Cucumber (Gy14) v1

NameCucsa.142850
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionGPI mannosyltransferase 2
Locationscaffold01079 : 1092553 .. 1093199 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATCAACAAGCCTCCTCCTACTACAAATTCCGACAACGAACGCATCGTTATTGGATCTGCCATAGCCTCACGGCTTCTTCTACTCTTCTTAATCGTCTTCTGGCGTTTTCTCCTCAGCCCTTACGACACTTCAGCATCGCTTAATCCTTCATGCTTAATCAACCCATCTTCTTTACCCCTCACCCAACAACCAGTTCTTTTtCCTCAAATTGGCTCCGCCATTGAGAGCAGCATTGTCTGGGATGGCGTCTACTTCGTCCGAATCGCTCAGTGCGGTTATGAATATGAGAAATCCTACGCCTTCTTGCCCCTTCTCCCTTTCTGCATTTCCCTCCTGTCCCGCACAGGTTTGCTATTTATACTTCATTTCGTTGTTTATTCCATTGTTATTTTTATTTTATTGGTTATTATGTAGAATGATCGCTTCTTACATTTTACTTGGGTGGCTTATGAACAACTGCCGATGTGCTTCGGGGATTAATTCATTTTTTGTGTGGTTAATGCGGTTCTAATTTTGGTACAGTATTGTTGCCTTTGGTTCCGGTAATTGGGCATAGAGCTGTATTGGGACTGTCTGGATATCTAATTAATAACATTGCTTTTGTCCTTGCTGCACGTTATCTTTTCAGGTGGGTTTGTTGA

mRNA sequence

ATGGCCATCAACAAGCCTCCTCCTACTACAAATTCCGACAACGAACGCATCGTTATTGGATCTGCCATAGCCTCACGGCTTCTTCTACTCTTCTTAATCGTCTTCTGGCGTTTTCTCCTCAGCCCTTACGACACTTCAGCATCGCTTAATCCTTCATGCTTAATCAACCCATCTTCTTTACCCCTCACCCAACAACCAGTTCTTTTTCCTCAAATTGGCTCCGCCATTGAGAGCAGCATTGTCTGGGATGGCGTCTACTTCGTCCGAATCGCTCAGTGCGGTTATGAATATGAGAAATCCTACGCCTTCTTGCCCCTTCTCCCTTTCTGCATTTCCCTCCTGTCCCGCACAGTATTGTTGCCTTTGGTTCCGGTAATTGGGCATAGAGCTGTATTGGGACTGTCTGGATATCTAATTAATAACATTGCTTTTGTCCTTGCTGCACGTTATCTTTTCAGGTGGGTTTGTTGA

Coding sequence (CDS)

ATGGCCATCAACAAGCCTCCTCCTACTACAAATTCCGACAACGAACGCATCGTTATTGGATCTGCCATAGCCTCACGGCTTCTTCTACTCTTCTTAATCGTCTTCTGGCGTTTTCTCCTCAGCCCTTACGACACTTCAGCATCGCTTAATCCTTCATGCTTAATCAACCCATCTTCTTTACCCCTCACCCAACAACCAGTTCTTTTtCCTCAAATTGGCTCCGCCATTGAGAGCAGCATTGTCTGGGATGGCGTCTACTTCGTCCGAATCGCTCAGTGCGGTTATGAATATGAGAAATCCTACGCCTTCTTGCCCCTTCTCCCTTTCTGCATTTCCCTCCTGTCCCGCACAGTATTGTTGCCTTTGGTTCCGGTAATTGGGCATAGAGCTGTATTGGGACTGTCTGGATATCTAATTAATAACATTGCTTTTGTCCTTGCTGCACGTTATCTTTTCAGGTGGGTTTGTTGA

Protein sequence

MAINKPPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSLPLTQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLLPLVPVIGHRAVLGLSGYLINNIAFVLAARYLFRWVC*
BLAST of Cucsa.142850 vs. TrEMBL
Match: A0A0A0LZG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G604050 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 3.9e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1

Query: 1   MAINKPPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSL 60
           MAINKPPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSL
Sbjct: 1   MAINKPPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSL 60

Query: 61  PLTQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLL 120
           PLTQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLL
Sbjct: 61  PLTQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLL 120

Query: 121 PLVPVIGHRAVLGLSGYLINNIAFVLAARYLFR 154
           PLVPVIGHRAVLGLSGYLINNIAFVLAARYLFR
Sbjct: 121 PLVPVIGHRAVLGLSGYLINNIAFVLAARYLFR 153

BLAST of Cucsa.142850 vs. TrEMBL
Match: W9S353_9ROSA (GPI mannosyltransferase 2 OS=Morus notabilis GN=L484_001330 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-48
Identity = 101/148 (68.24%), Postives = 115/148 (77.70%), Query Frame = 1

Query: 6   PPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSLPLTQQ 65
           P P  +      V+ SA+ SRLLLL LI+ WR LLSPYDTSA LNP+CL N +S P  +Q
Sbjct: 9   PKPQDHHHQRITVLKSALLSRLLLLTLILIWRSLLSPYDTSAPLNPNCLSNTTSPPPQEQ 68

Query: 66  PVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLLPLVPV 125
            +L+P + SAIESSIVWD VYFVRIAQCGYEYE+SYAFLPLLP CIS  SRTV  PLVPV
Sbjct: 69  RLLWPSLASAIESSIVWDSVYFVRIAQCGYEYEQSYAFLPLLPLCISFFSRTVFAPLVPV 128

Query: 126 IGHRAVLGLSGYLINNIAFVLAARYLFR 154
           IG RAVLGLSGY+INNIAFV AA Y ++
Sbjct: 129 IGQRAVLGLSGYVINNIAFVFAAVYFYQ 156

BLAST of Cucsa.142850 vs. TrEMBL
Match: A0A059BR03_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02225 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-48
Identity = 100/146 (68.49%), Postives = 121/146 (82.88%), Query Frame = 1

Query: 8   PTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSLPLTQQPV 67
           P +NS  E +V+ SA+ASR LL+ LI+ WR LL PYDTSA+LNP+CL + SS    ++P 
Sbjct: 2   PPSNS-YESLVLKSALASRFLLITLIILWRSLLDPYDTSATLNPNCLSSTSSSSSAEKPA 61

Query: 68  LFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLLPLVPVIG 127
           L+P +GSAIES+IVWD VY+VRIAQCGYEYE++YAF PLLPF IS+ SRTVLLPLVPVIG
Sbjct: 62  LWPSLGSAIESNIVWDSVYYVRIAQCGYEYEQTYAFFPLLPFLISVSSRTVLLPLVPVIG 121

Query: 128 HRAVLGLSGYLINNIAFVLAARYLFR 154
           +RAVLGLSGYLI+NIAFV AA Y +R
Sbjct: 122 YRAVLGLSGYLISNIAFVFAAVYFYR 146

BLAST of Cucsa.142850 vs. TrEMBL
Match: M5W449_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004654mg PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.8e-48
Identity = 104/148 (70.27%), Postives = 118/148 (79.73%), Query Frame = 1

Query: 14  NERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSLPLT--------QQ 73
           +E  VI SAI SRL++L LI+ WR LLSPYDTSA +NP+CL N +S P          QQ
Sbjct: 12  HETTVIKSAIISRLIVLTLILLWRTLLSPYDTSAPINPNCLSNNTSQPNVDLQQQQQQQQ 71

Query: 74  PVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLLPLVPV 133
            VL P +GSAIESSIVWD VYFVRIAQCGYEYE++YAFLPLLP CISLLSRTVL PLVPV
Sbjct: 72  HVLLPSLGSAIESSIVWDSVYFVRIAQCGYEYEQTYAFLPLLPLCISLLSRTVLAPLVPV 131

Query: 134 IGHRAVLGLSGYLINNIAFVLAARYLFR 154
           IG RAVLGLSG++INNIAFV+ A YL+R
Sbjct: 132 IGQRAVLGLSGFVINNIAFVIVAVYLYR 159

BLAST of Cucsa.142850 vs. TrEMBL
Match: A0A166GTQ0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_001990 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.1e-46
Identity = 92/143 (64.34%), Postives = 117/143 (81.82%), Query Frame = 1

Query: 11  NSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSLPLTQQPVLFP 70
           ++ + R+VI +AIASR+LLL LI+FWR L+SPYDTSAS+NP+CL +P +  +   P+ FP
Sbjct: 6   STHHNRLVINTAIASRILLLTLIIFWRSLVSPYDTSASINPNCLSSPKTQSI---PIKFP 65

Query: 71  QIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLLPLVPVIGHRA 130
            + S IE+SIVWD VYFVRIAQCGYEYE++YAF PLLPFCI + S+TV  PLVP++G+RA
Sbjct: 66  YVASLIENSIVWDSVYFVRIAQCGYEYEQTYAFWPLLPFCIFVFSKTVFAPLVPLVGYRA 125

Query: 131 VLGLSGYLINNIAFVLAARYLFR 154
           VLGLSGY++NNIAFV AA Y  R
Sbjct: 126 VLGLSGYVLNNIAFVFAAVYFHR 145

BLAST of Cucsa.142850 vs. TAIR10
Match: AT1G11880.1 (AT1G11880.1 transferases, transferring hexosyl groups)

HSP 1 Score: 164.1 bits (414), Expect = 7.1e-41
Identity = 85/145 (58.62%), Postives = 106/145 (73.10%), Query Frame = 1

Query: 10  TNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSLPLTQQPVLF 69
           + S  E I+I  AI SRLL+LFL + WR LL PYDTSA+LNP CL +         P L 
Sbjct: 9   SKSRKETILIKYAIFSRLLVLFLTILWRSLLQPYDTSAALNPPCLYHKED----SFPFLV 68

Query: 70  PQIGS-AIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLLPLVPVIGH 129
               S ++E+S+VWD VYF+RI +CGYEYE++YAFLPLLPF ISLLSRTV  PLVP+IG 
Sbjct: 69  ANAASRSLENSVVWDSVYFLRITECGYEYEQTYAFLPLLPFFISLLSRTVFAPLVPLIGL 128

Query: 130 RAVLGLSGYLINNIAFVLAARYLFR 154
           RAV+ LSG+ ++N+AF+ AA YLFR
Sbjct: 129 RAVMVLSGFTVSNLAFIFAAIYLFR 149

BLAST of Cucsa.142850 vs. NCBI nr
Match: gi|449462575|ref|XP_004149016.1| (PREDICTED: GPI mannosyltransferase 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 5.6e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1

Query: 1   MAINKPPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSL 60
           MAINKPPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSL
Sbjct: 1   MAINKPPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSL 60

Query: 61  PLTQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLL 120
           PLTQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLL
Sbjct: 61  PLTQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLL 120

Query: 121 PLVPVIGHRAVLGLSGYLINNIAFVLAARYLFR 154
           PLVPVIGHRAVLGLSGYLINNIAFVLAARYLFR
Sbjct: 121 PLVPVIGHRAVLGLSGYLINNIAFVLAARYLFR 153

BLAST of Cucsa.142850 vs. NCBI nr
Match: gi|778663489|ref|XP_011660096.1| (PREDICTED: GPI mannosyltransferase 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 5.6e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1

Query: 1   MAINKPPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSL 60
           MAINKPPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSL
Sbjct: 1   MAINKPPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSL 60

Query: 61  PLTQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLL 120
           PLTQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLL
Sbjct: 61  PLTQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLL 120

Query: 121 PLVPVIGHRAVLGLSGYLINNIAFVLAARYLFR 154
           PLVPVIGHRAVLGLSGYLINNIAFVLAARYLFR
Sbjct: 121 PLVPVIGHRAVLGLSGYLINNIAFVLAARYLFR 153

BLAST of Cucsa.142850 vs. NCBI nr
Match: gi|659100441|ref|XP_008451101.1| (PREDICTED: GPI mannosyltransferase 2 [Cucumis melo])

HSP 1 Score: 297.0 bits (759), Expect = 2.0e-77
Identity = 149/153 (97.39%), Postives = 150/153 (98.04%), Query Frame = 1

Query: 1   MAINKPPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSL 60
           MAINKPP TTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNP CLINPSSL
Sbjct: 1   MAINKPPATTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPPCLINPSSL 60

Query: 61  PLTQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLL 120
           PL+QQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLS TVLL
Sbjct: 61  PLSQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSHTVLL 120

Query: 121 PLVPVIGHRAVLGLSGYLINNIAFVLAARYLFR 154
           PLVPVIGHRAVLGLSGYLINNIAFVLAARYLFR
Sbjct: 121 PLVPVIGHRAVLGLSGYLINNIAFVLAARYLFR 153

BLAST of Cucsa.142850 vs. NCBI nr
Match: gi|1009123921|ref|XP_015878798.1| (PREDICTED: GPI mannosyltransferase 2 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 203.0 bits (515), Expect = 3.9e-49
Identity = 104/149 (69.80%), Postives = 118/149 (79.19%), Query Frame = 1

Query: 13  DNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSLPLT-------QQ 72
           D + IV+ SA+ASRLLLL LI+ WR LLSPYDTSASLNP+CL    S P         QQ
Sbjct: 11  DQQTIVVKSAVASRLLLLSLILLWRTLLSPYDTSASLNPNCLNQHPSPPHAHAHPNPQQQ 70

Query: 73  PVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLLPLVPV 132
           P L+P + SAIESS+VWDGVYFVRIAQCGYEYE+SYAFLPLLP CIS+LSRTV  PLVPV
Sbjct: 71  PPLWPTLASAIESSVVWDGVYFVRIAQCGYEYEQSYAFLPLLPLCISMLSRTVFAPLVPV 130

Query: 133 IGHRAVLGLSGYLINNIAFVLAARYLFRW 155
           IG RAVLGLS Y+INNIAFV +A Y +R+
Sbjct: 131 IGQRAVLGLSAYVINNIAFVFSAVYFYRY 159

BLAST of Cucsa.142850 vs. NCBI nr
Match: gi|1009123919|ref|XP_015878796.1| (PREDICTED: GPI mannosyltransferase 2 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 202.2 bits (513), Expect = 6.6e-49
Identity = 104/148 (70.27%), Postives = 117/148 (79.05%), Query Frame = 1

Query: 13  DNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSLPLT-------QQ 72
           D + IV+ SA+ASRLLLL LI+ WR LLSPYDTSASLNP+CL    S P         QQ
Sbjct: 11  DQQTIVVKSAVASRLLLLSLILLWRTLLSPYDTSASLNPNCLNQHPSPPHAHAHPNPQQQ 70

Query: 73  PVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLLPLVPV 132
           P L+P + SAIESS+VWDGVYFVRIAQCGYEYE+SYAFLPLLP CIS+LSRTV  PLVPV
Sbjct: 71  PPLWPTLASAIESSVVWDGVYFVRIAQCGYEYEQSYAFLPLLPLCISMLSRTVFAPLVPV 130

Query: 133 IGHRAVLGLSGYLINNIAFVLAARYLFR 154
           IG RAVLGLS Y+INNIAFV +A Y +R
Sbjct: 131 IGQRAVLGLSAYVINNIAFVFSAVYFYR 158

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LZG3_CUCSA3.9e-80100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G604050 PE=4 SV=1[more]
W9S353_9ROSA1.3e-4868.24GPI mannosyltransferase 2 OS=Morus notabilis GN=L484_001330 PE=4 SV=1[more]
A0A059BR03_EUCGR1.3e-4868.49Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02225 PE=4 SV=1[more]
M5W449_PRUPE1.8e-4870.27Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004654mg PE=4 SV=1[more]
A0A166GTQ0_DAUCA2.1e-4664.34Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_001990 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G11880.17.1e-4158.62 transferases, transferring hexosyl groups[more]
Match NameE-valueIdentityDescription
gi|449462575|ref|XP_004149016.1|5.6e-80100.00PREDICTED: GPI mannosyltransferase 2 isoform X1 [Cucumis sativus][more]
gi|778663489|ref|XP_011660096.1|5.6e-80100.00PREDICTED: GPI mannosyltransferase 2 isoform X2 [Cucumis sativus][more]
gi|659100441|ref|XP_008451101.1|2.0e-7797.39PREDICTED: GPI mannosyltransferase 2 [Cucumis melo][more]
gi|1009123921|ref|XP_015878798.1|3.9e-4969.80PREDICTED: GPI mannosyltransferase 2 isoform X2 [Ziziphus jujuba][more]
gi|1009123919|ref|XP_015878796.1|6.6e-4970.27PREDICTED: GPI mannosyltransferase 2 isoform X1 [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007315PIG-V/Gpi18
Vocabulary: Molecular Function
TermDefinition
GO:0004584dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006506GPI anchor biosynthetic process
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006506 GPI anchor biosynthetic process
cellular_component GO:0000136 alpha-1,6-mannosyltransferase complex
molecular_function GO:0004584 dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.142850.1Cucsa.142850.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007315GPI mannosyltransferase 2PANTHERPTHR12468GPI MANNOSYLTRANSFERASE 2coord: 12..153
score: 4.8
IPR007315GPI mannosyltransferase 2PFAMPF04188Mannosyl_trans2coord: 18..155
score: 4.2
NoneNo IPR availablePANTHERPTHR12468:SF2GPI MANNOSYLTRANSFERASE 2coord: 12..153
score: 4.8

The following gene(s) are paralogous to this gene:

None