Cucsa.142850 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATCAACAAGCCTCCTCCTACTACAAATTCCGACAACGAACGCATCGTTATTGGATCTGCCATAGCCTCACGGCTTCTTCTACTCTTCTTAATCGTCTTCTGGCGTTTTCTCCTCAGCCCTTACGACACTTCAGCATCGCTTAATCCTTCATGCTTAATCAACCCATCTTCTTTACCCCTCACCCAACAACCAGTTCTTTTtCCTCAAATTGGCTCCGCCATTGAGAGCAGCATTGTCTGGGATGGCGTCTACTTCGTCCGAATCGCTCAGTGCGGTTATGAATATGAGAAATCCTACGCCTTCTTGCCCCTTCTCCCTTTCTGCATTTCCCTCCTGTCCCGCACAGGTTTGCTATTTATACTTCATTTCGTTGTTTATTCCATTGTTATTTTTATTTTATTGGTTATTATGTAGAATGATCGCTTCTTACATTTTACTTGGGTGGCTTATGAACAACTGCCGATGTGCTTCGGGGATTAATTCATTTTTTGTGTGGTTAATGCGGTTCTAATTTTGGTACAGTATTGTTGCCTTTGGTTCCGGTAATTGGGCATAGAGCTGTATTGGGACTGTCTGGATATCTAATTAATAACATTGCTTTTGTCCTTGCTGCACGTTATCTTTTCAGGTGGGTTTGTTGA ATGGCCATCAACAAGCCTCCTCCTACTACAAATTCCGACAACGAACGCATCGTTATTGGATCTGCCATAGCCTCACGGCTTCTTCTACTCTTCTTAATCGTCTTCTGGCGTTTTCTCCTCAGCCCTTACGACACTTCAGCATCGCTTAATCCTTCATGCTTAATCAACCCATCTTCTTTACCCCTCACCCAACAACCAGTTCTTTTTCCTCAAATTGGCTCCGCCATTGAGAGCAGCATTGTCTGGGATGGCGTCTACTTCGTCCGAATCGCTCAGTGCGGTTATGAATATGAGAAATCCTACGCCTTCTTGCCCCTTCTCCCTTTCTGCATTTCCCTCCTGTCCCGCACAGTATTGTTGCCTTTGGTTCCGGTAATTGGGCATAGAGCTGTATTGGGACTGTCTGGATATCTAATTAATAACATTGCTTTTGTCCTTGCTGCACGTTATCTTTTCAGGTGGGTTTGTTGA ATGGCCATCAACAAGCCTCCTCCTACTACAAATTCCGACAACGAACGCATCGTTATTGGATCTGCCATAGCCTCACGGCTTCTTCTACTCTTCTTAATCGTCTTCTGGCGTTTTCTCCTCAGCCCTTACGACACTTCAGCATCGCTTAATCCTTCATGCTTAATCAACCCATCTTCTTTACCCCTCACCCAACAACCAGTTCTTTTtCCTCAAATTGGCTCCGCCATTGAGAGCAGCATTGTCTGGGATGGCGTCTACTTCGTCCGAATCGCTCAGTGCGGTTATGAATATGAGAAATCCTACGCCTTCTTGCCCCTTCTCCCTTTCTGCATTTCCCTCCTGTCCCGCACAGTATTGTTGCCTTTGGTTCCGGTAATTGGGCATAGAGCTGTATTGGGACTGTCTGGATATCTAATTAATAACATTGCTTTTGTCCTTGCTGCACGTTATCTTTTCAGGTGGGTTTGTTGA MAINKPPPTTNSDNERIVIGSAIASRLLLLFLIVFWRFLLSPYDTSASLNPSCLINPSSLPLTQQPVLFPQIGSAIESSIVWDGVYFVRIAQCGYEYEKSYAFLPLLPFCISLLSRTVLLPLVPVIGHRAVLGLSGYLINNIAFVLAARYLFRWVC*
BLAST of Cucsa.142850 vs. TrEMBL
Match: A0A0A0LZG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G604050 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 3.9e-80 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1
BLAST of Cucsa.142850 vs. TrEMBL
Match: W9S353_9ROSA (GPI mannosyltransferase 2 OS=Morus notabilis GN=L484_001330 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.3e-48 Identity = 101/148 (68.24%), Postives = 115/148 (77.70%), Query Frame = 1
BLAST of Cucsa.142850 vs. TrEMBL
Match: A0A059BR03_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02225 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.3e-48 Identity = 100/146 (68.49%), Postives = 121/146 (82.88%), Query Frame = 1
BLAST of Cucsa.142850 vs. TrEMBL
Match: M5W449_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004654mg PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 1.8e-48 Identity = 104/148 (70.27%), Postives = 118/148 (79.73%), Query Frame = 1
BLAST of Cucsa.142850 vs. TrEMBL
Match: A0A166GTQ0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_001990 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 2.1e-46 Identity = 92/143 (64.34%), Postives = 117/143 (81.82%), Query Frame = 1
BLAST of Cucsa.142850 vs. TAIR10
Match: AT1G11880.1 (AT1G11880.1 transferases, transferring hexosyl groups) HSP 1 Score: 164.1 bits (414), Expect = 7.1e-41 Identity = 85/145 (58.62%), Postives = 106/145 (73.10%), Query Frame = 1
BLAST of Cucsa.142850 vs. NCBI nr
Match: gi|449462575|ref|XP_004149016.1| (PREDICTED: GPI mannosyltransferase 2 isoform X1 [Cucumis sativus]) HSP 1 Score: 305.4 bits (781), Expect = 5.6e-80 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1
BLAST of Cucsa.142850 vs. NCBI nr
Match: gi|778663489|ref|XP_011660096.1| (PREDICTED: GPI mannosyltransferase 2 isoform X2 [Cucumis sativus]) HSP 1 Score: 305.4 bits (781), Expect = 5.6e-80 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1
BLAST of Cucsa.142850 vs. NCBI nr
Match: gi|659100441|ref|XP_008451101.1| (PREDICTED: GPI mannosyltransferase 2 [Cucumis melo]) HSP 1 Score: 297.0 bits (759), Expect = 2.0e-77 Identity = 149/153 (97.39%), Postives = 150/153 (98.04%), Query Frame = 1
BLAST of Cucsa.142850 vs. NCBI nr
Match: gi|1009123921|ref|XP_015878798.1| (PREDICTED: GPI mannosyltransferase 2 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 203.0 bits (515), Expect = 3.9e-49 Identity = 104/149 (69.80%), Postives = 118/149 (79.19%), Query Frame = 1
BLAST of Cucsa.142850 vs. NCBI nr
Match: gi|1009123919|ref|XP_015878796.1| (PREDICTED: GPI mannosyltransferase 2 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 202.2 bits (513), Expect = 6.6e-49 Identity = 104/148 (70.27%), Postives = 117/148 (79.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |