Cucsa.142770 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.142770
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Glucan endo-1,3-beta-glucosidase, putative
Location	scaffold01079 : 985654 .. 986642 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCGAAGGTAACAACCTCCCACCACCATGGAAGGTGGTGCAACTCTGCCAAAAATACAATATTCGTCGCATTCGATTCAGTGAACCAAATCTCGATATTCTCTAACAGTTTCGTGGCACATATATCGAAGTCTCTTTTAGCGTACCAGGTGCATTGATAACAAACCAGGCGACCAATGACACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGTGCTGCAATCGATAAGGCAGATGTTGGAGATGTCGCCATTGCAATTGGGGAAACCGGATGGCCGACCCAGGGGAATTATGGTGCAGGCCCATCGCTTGCACTTACATACAATTTGAATTTtAATAATCCTATTACCTCTGGGAAGGGGACACCAATGAAGCCAAATGTTTATATTGAAGGATTCATCAGAAGTTTATTCAACGAGAATGAAAAGCCAGAAGGGGAGTCACAATTTTATGGCATGTTCCATGTTGATTCCACACCTATTTATCC

mRNA sequence

ATGGATCCGAAGGTAACAACCTCCCACCACCATGGAAGGTGGTGCAACTCTGCCAAAAATACAATATTCGTCGCATTCGATTCAGTGAACCAAATCTCGATATTCTCTAACAGTTTCGTGGCACATATATCGAAGTCTCTTTTAGCGTACCAGGCAGATGTTGGAGATGTCGCCATTGCAATTGGGGAAACCGGATGGCCGACCCAGGGGAATTATGGTGCAGGCCCATCGCTTGCACTTACATACAATTTGAATTTTAATAATCCTATTACCTCTGGGAAGGGGACACCAATGAAGCCAAATGTTTATATTGAAGGATTCATCAGAAGTTTATTCAACGAGAATGAAAAGCCAGAAGGGGAGTCACAATTTTATGGCATGTTCCATGTTGATtccacacctatttatcc

Coding sequence (CDS)

ATGGATCCGAAGGTAACAACCTCCCACCACCATGGAAGGTGGTGCAACTCTGCCAAAAATACAATATTCGTCGCATTCGATTCAGTGAACCAAATCTCGATATTCTCTAACAGTTTCGTGGCACATATATCGAAGTCTCTTTTAGCGTACCAGGCAGATGTTGGAGATGTCGCCATTGCAATTGGGGAAACCGGATGGCCGACCCAGGGGAATTATGGTGCAGGCCCATCGCTTGCACTTACATACAATTTGAATTTtAATAATCCTATTACCTCTGGGAAGGGGACACCAATGAAGCCAAATGTTTATATTGAAGGATTCATCAGAAGTTTATTCAACGAGAATGAAAAGCCAGAAGGGGAGTCACAATTTTATGGCATGTTCCATGTTGATTCCACACCTATTTATCC

Protein sequence

MDPKVTTSHHHGRWCNSAKNTIFVAFDSVNQISIFSNSFVAHISKSLLAYQADVGDVAIAIGETGWPTQGNYGAGPSLALTYNLNFNNPITSGKGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFHVDSTPIYX

Homology

[Close]

BLAST of Cucsa.142770 vs. Swiss-Prot
Match: BG5_ARATH (Probable glucan endo-1,3-beta-glucosidase BG5 OS=Arabidopsis thaliana GN=BG5 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-15
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 1


Query: 35  FSNSFVAHISKSLLAYQAD-VGDVAIAIGETGWPTQGNYG-AGPSLALTYNLNFNNPITS 94
           +SN F A     + A + + V D+ + + ETGWP+ GN     P +A TYN NF   I S
Sbjct: 247 YSNMFDAIFDAFVWAMEKEGVKDLPMVVSETGWPSAGNGNITTPDIAGTYNRNFVKHIAS 306

Query: 95  GKGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFHV-DSTPIY 137
           GKGTP +PN  I+GF+ + FNEN+KP G  Q +G+++  D  PIY
Sbjct: 307 GKGTPKRPNKGIDGFLFATFNENQKPVGTEQNFGLYNPNDMKPIY 351

[Close]

BLAST of Cucsa.142770 vs. Swiss-Prot
Match: BG4_ARATH (Probable glucan endo-1,3-beta-glucosidase BG4 OS=Arabidopsis thaliana GN=BG4 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.2e-15
Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = 1


Query: 35  FSNSFVAHISKSLLAYQAD-VGDVAIAIGETGWPTQGNYG-AGPSLALTYNLNFNNPITS 94
           +SN F A     + A + + V ++ + + ETGWP+ GN     P++A TYN NF   I S
Sbjct: 238 YSNMFDAIFDAFVWAMEKEGVKNLPMVVSETGWPSAGNGNFTTPAIASTYNRNFVKHIAS 297

Query: 95  GKGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFH-VDSTPIY 137
           GKGTP +PN  + GF+ + FNEN+KP G  Q +G+++  D  PIY
Sbjct: 298 GKGTPKRPNKSMNGFLFATFNENQKPAGTEQNFGLYNPSDMKPIY 342

[Close]

BLAST of Cucsa.142770 vs. Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.7e-13
Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 1


Query: 55  GDVAIAIGETGWPTQ---GNYGAGPSLALTYNLNFNNPITSGKGTPMKPNVYIEGFIRSL 114
           GDV IA+GE GWPTQ   G  G G   A  +N       +SGKGTP+ PN   E ++ SL
Sbjct: 257 GDVDIAVGEAGWPTQAEPGQIGVGVQEARDFNEGMIRVCSSGKGTPLMPNRTFETYLFSL 316

Query: 115 FNENEKPEG-ESQFYGMFHVDSTPIY 137
           F+EN+KP     + +G+F+ D TP+Y
Sbjct: 317 FDENQKPGPIAERHFGLFNPDFTPVY 342

[Close]

BLAST of Cucsa.142770 vs. Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 4.8e-11
Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 1


Query: 56  DVAIAIGETGWPTQGN---YGAGPSLALTYNLNFNNPITSGKGTPMKPNVYIEGFIRSLF 115
           D+ + I ETGWP++G+    GA P  A  YN N    I   KGTP K +V I+ ++ +LF
Sbjct: 260 DIEVRISETGWPSKGDENEIGASPENAALYNGNLLKLIQQRKGTPAKQSVPIDVYVFALF 319

Query: 116 NENEKPEGESQ-FYGMFHVDSTPIY 137
           NEN KP   S+  YG+F+ D  P+Y
Sbjct: 320 NENLKPGPVSERNYGLFYPDGKPVY 344

[Close]

BLAST of Cucsa.142770 vs. Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.6e-09
Identity = 46/143 (32.17%), Postives = 69/143 (48.25%), Query Frame = 1


Query: 9   HHHGRWCNSAKNTI--FVAFDSVN-----QISIFSNSFVAHISKSLLAYQADVG--DVAI 68
           H + RW  +  NT   F  F   +     Q  +   + +  +  S+L     +G   + +
Sbjct: 217 HPYFRWSRNPMNTSLDFALFQGHSTYTDPQTGLVYRNLLDQMLDSVLFAMTKLGYPHMRL 276

Query: 69  AIGETGWPTQGNY---GAGPSLALTYNLNFNNPITSGK--GTPMKPNVYIEGFIRSLFNE 128
           AI ETGWP  G+    GA    A TYN N    +++    GTP +P + I  F+ SLFNE
Sbjct: 277 AISETGWPNFGDIDETGANILNAATYNRNLIKKMSASPPIGTPSRPGLPIPTFVFSLFNE 336

Query: 129 NEKP-EGESQFYGMFHVDSTPIY 137
           N+K   G  + +G+ H D +PIY
Sbjct: 337 NQKSGSGTQRHWGILHPDGSPIY 359

[Close]

BLAST of Cucsa.142770 vs. TrEMBL
Match: A0A0A0LR03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416760 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-39
Identity = 79/86 (91.86%), Postives = 82/86 (95.35%), Query Frame = 1


Query: 51  QADVGDVAIAIGETGWPTQGNYGAGPSLALTYNLNFNNPITSGKGTPMKPNVYIEGFIRS 110
           +A  GDVAIAIGETGWPT+GNYGAGPSLALTYNLNF N ITSGKGTPMKPN+YIEGFIRS
Sbjct: 255 KACAGDVAIAIGETGWPTEGNYGAGPSLALTYNLNFKNHITSGKGTPMKPNIYIEGFIRS 314

Query: 111 LFNENEKPEGESQFYGMFHVDSTPIY 137
           LFNENEKPEGESQFYGMFHVDSTPIY
Sbjct: 315 LFNENEKPEGESQFYGMFHVDSTPIY 340

[Close]

BLAST of Cucsa.142770 vs. TrEMBL
Match: A0A0A0LWM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G595910 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-38
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 1


Query: 51  QADVGDVAIAIGETGWPTQGNYGAGPSLALTYNLNFNNPITSGKGTPMKPNVYIEGFIRS 110
           +A+VGDVAIAIGETGWPT GNYGAGPSLALTYNLNF N ITSGKGTPM PN+YIEGFIRS
Sbjct: 190 KANVGDVAIAIGETGWPTNGNYGAGPSLALTYNLNFKNHITSGKGTPMMPNIYIEGFIRS 249

Query: 111 LFNENEKPEGESQFYGMFHVDSTPIY 137
           LFNENEKPEGESQFYGMFH+D TPIY
Sbjct: 250 LFNENEKPEGESQFYGMFHIDFTPIY 275

[Close]

BLAST of Cucsa.142770 vs. TrEMBL
Match: A0A0A0LZ10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G595900 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-21
Identity = 54/107 (50.47%), Postives = 71/107 (66.36%), Query Frame = 1


Query: 30  NQISIFSNSFVAHISKSLLAYQADVGDVAIAIGETGWPTQGNYGAGPSLALTYNLNFNNP 89
           N      ++F A I K +      VG+V I +GETGWPT G+     ++A  YN  F + 
Sbjct: 233 NLFDAMVDAFYAAIEKEM------VGEVNIVVGETGWPTCGDISGTQAIAKEYNNKFKSH 292

Query: 90  ITSGKGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFHVDSTPIY 137
           I+SG GTP KPNVY+EGFI+S+FNE++KPEG+SQ YGMF V+  PIY
Sbjct: 293 ISSGNGTPRKPNVYLEGFIQSIFNEDKKPEGDSQCYGMFDVNMKPIY 333

[Close]

BLAST of Cucsa.142770 vs. TrEMBL
Match: M5VS03_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015919mg PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.0e-16
Identity = 47/104 (45.19%), Postives = 64/104 (61.54%), Query Frame = 1


Query: 35  FSNSFVAHISKSLLAYQADVG-DVAIAIGETGWPTQGNYG-AGPSLALTYNLNFNNPITS 94
           + N F A +   L A +   G +V + + E+GWP+ GN     P LA TYN NF   ITS
Sbjct: 234 YYNLFDAAVDSFLAAMEKVGGANVDVVVSESGWPSDGNGNFTTPELAGTYNRNFLKHITS 293

Query: 95  GKGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFHVDSTPIY 137
             GTP +P  YIEG+I ++FNEN+KPEG  Q +G+FH +  P+Y
Sbjct: 294 NAGTPKRPGAYIEGYIFAMFNENQKPEGVEQHFGLFHPNMQPVY 337

[Close]

BLAST of Cucsa.142770 vs. TrEMBL
Match: M5VT74_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020193mg PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.0e-16
Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 1


Query: 51  QADVGDVAIAIGETGWPTQGNYG-AGPSLALTYNLNFNNPITSGKGTPMKPNVYIEGFIR 110
           +A  G V + + E+GWP+ GN     P LA TYN NF   ITS  GTP +P  YIEG+I 
Sbjct: 142 KAGGGGVGVVVSESGWPSDGNGDFTTPELARTYNRNFLKHITSKAGTPKRPGAYIEGYIF 201

Query: 111 SLFNENEKPEGESQFYGMFHVDSTPIY 137
           ++FNEN+KPEG  Q +G+FH +  P+Y
Sbjct: 202 AMFNENQKPEGVEQHFGLFHPNMQPVY 228

[Close]

BLAST of Cucsa.142770 vs. TAIR10
Match: AT5G20340.1 (AT5G20340.1 beta-1,3-glucanase 5)

HSP 1 Score: 84.3 bits (207), Expect = 6.2e-17
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 1


Query: 35  FSNSFVAHISKSLLAYQAD-VGDVAIAIGETGWPTQGNYG-AGPSLALTYNLNFNNPITS 94
           +SN F A     + A + + V D+ + + ETGWP+ GN     P +A TYN NF   I S
Sbjct: 247 YSNMFDAIFDAFVWAMEKEGVKDLPMVVSETGWPSAGNGNITTPDIAGTYNRNFVKHIAS 306

Query: 95  GKGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFHV-DSTPIY 137
           GKGTP +PN  I+GF+ + FNEN+KP G  Q +G+++  D  PIY
Sbjct: 307 GKGTPKRPNKGIDGFLFATFNENQKPVGTEQNFGLYNPNDMKPIY 351

[Close]

BLAST of Cucsa.142770 vs. TAIR10
Match: AT5G20330.1 (AT5G20330.1 beta-1,3-glucanase 4)

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-16
Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = 1


Query: 35  FSNSFVAHISKSLLAYQAD-VGDVAIAIGETGWPTQGNYG-AGPSLALTYNLNFNNPITS 94
           +SN F A     + A + + V ++ + + ETGWP+ GN     P++A TYN NF   I S
Sbjct: 238 YSNMFDAIFDAFVWAMEKEGVKNLPMVVSETGWPSAGNGNFTTPAIASTYNRNFVKHIAS 297

Query: 95  GKGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFH-VDSTPIY 137
           GKGTP +PN  + GF+ + FNEN+KP G  Q +G+++  D  PIY
Sbjct: 298 GKGTPKRPNKSMNGFLFATFNENQKPAGTEQNFGLYNPSDMKPIY 342

[Close]

BLAST of Cucsa.142770 vs. TAIR10
Match: AT3G46570.1 (AT3G46570.1 Glycosyl hydrolase superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 3.4e-15
Identity = 46/117 (39.32%), Postives = 62/117 (52.99%), Query Frame = 1


Query: 24  VAFDSVNQISIFSNSFVAHISKSLLAYQA-DVGDVAIAIGETGWPTQGN---YGAGPSLA 83
           V  D V +++ ++N F A +     A +    GDV I + ETGWP+ G     G G   A
Sbjct: 225 VYVDPVTKLN-YTNMFDAQLDAVYSAMKRFGYGDVDIVVAETGWPSAGEPNQTGVGLDYA 284

Query: 84  LTYNLNFNNPITSGKGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFHVDSTPIY 137
             YN N    + SGKGTP+ PN   E ++ SLFNEN K     Q +G+F  D TP+Y
Sbjct: 285 AAYNGNLIKHVNSGKGTPLMPNRVFETYVFSLFNENLKSSVSEQNFGLFKPDFTPVY 340

[Close]

BLAST of Cucsa.142770 vs. TAIR10
Match: AT5G20390.1 (AT5G20390.1 Glycosyl hydrolase superfamily protein)

HSP 1 Score: 78.2 bits (191), Expect = 4.4e-15
Identity = 42/109 (38.53%), Postives = 60/109 (55.05%), Query Frame = 1


Query: 30  NQISIFSNSFVAHISKSLLAYQADVGDVAIAIGETGWPTQGNYG-AGPSLALTYNLNFNN 89
           N   +  ++FV  + K        V D+ + + ETGWP+ GN     P +A  YN NF  
Sbjct: 239 NMFDVIFDAFVWAMEKE------GVKDLPMVVTETGWPSAGNGNLTTPDIASIYNTNFVK 298

Query: 90  PITSGKGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFH-VDSTPIY 137
            + SGKGTP +P   I GF+ + FNEN+KP G  Q +G+++  D  PIY
Sbjct: 299 HVESGKGTPKRPKSGISGFLFATFNENQKPAGTEQNFGLYNPTDMKPIY 341

[Close]

BLAST of Cucsa.142770 vs. TAIR10
Match: AT1G33220.1 (AT1G33220.1 Glycosyl hydrolase superfamily protein)

HSP 1 Score: 74.7 bits (182), Expect = 4.9e-14
Identity = 43/104 (41.35%), Postives = 58/104 (55.77%), Query Frame = 1


Query: 35  FSNSFVAHISKSLLAYQAD-VGDVAIAIGETGWPTQGNYG-AGPSLALTYNLNFNNPITS 94
           +SN F A     + A + + V D+ + + ETGWP+ GN     P +A TYN NF   I S
Sbjct: 238 YSNMFDAIFDAFVWAMEKEGVKDLPMVVSETGWPSAGNGNLTTPDIAGTYNRNFVKHIVS 297

Query: 95  GKGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFHVDSTPIY 137
           GKGTP +PN  ++GF+ + FNEN+KP G          D  PIY
Sbjct: 298 GKGTPKRPNNGMDGFLFATFNENQKPAG---------TDMKPIY 332

[Close]

BLAST of Cucsa.142770 vs. NCBI nr
Match: gi|778665355|ref|XP_011648543.1| (PREDICTED: glucan endo-1,3-beta-glucosidase-like [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-41
Identity = 87/103 (84.47%), Postives = 91/103 (88.35%), Query Frame = 1


Query: 35  FSNSFVAHISKSLLAY-QADVGDVAIAIGETGWPTQGNYGAGPSLALTYNLNFNNPITSG 94
           ++N F   +  S  A  +ADVGDVAIAIGETGWPTQGNYGAGPSLALTYNLNF N ITSG
Sbjct: 221 YNNIFDEMVDASCAAIDKADVGDVAIAIGETGWPTQGNYGAGPSLALTYNLNFKNHITSG 280

Query: 95  KGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFHVDSTPIY 137
           KGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFHVDSTPIY
Sbjct: 281 KGTPMKPNVYIEGFIRSLFNENEKPEGESQFYGMFHVDSTPIY 323

[Close]

BLAST of Cucsa.142770 vs. NCBI nr
Match: gi|778674443|ref|XP_004153772.2| (PREDICTED: lichenase-2-like [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 2.4e-39
Identity = 79/86 (91.86%), Postives = 82/86 (95.35%), Query Frame = 1


Query: 51  QADVGDVAIAIGETGWPTQGNYGAGPSLALTYNLNFNNPITSGKGTPMKPNVYIEGFIRS 110
           +A  GDVAIAIGETGWPT+GNYGAGPSLALTYNLNF N ITSGKGTPMKPN+YIEGFIRS
Sbjct: 255 KACAGDVAIAIGETGWPTEGNYGAGPSLALTYNLNFKNHITSGKGTPMKPNIYIEGFIRS 314

Query: 111 LFNENEKPEGESQFYGMFHVDSTPIY 137
           LFNENEKPEGESQFYGMFHVDSTPIY
Sbjct: 315 LFNENEKPEGESQFYGMFHVDSTPIY 340

[Close]

BLAST of Cucsa.142770 vs. NCBI nr
Match: gi|778665333|ref|XP_004144115.2| (PREDICTED: lichenase-2-like [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 1.6e-38
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 1


Query: 51  QADVGDVAIAIGETGWPTQGNYGAGPSLALTYNLNFNNPITSGKGTPMKPNVYIEGFIRS 110
           +A+VGDVAIAIGETGWPT GNYGAGPSLALTYNLNF N ITSGKGTPM PN+YIEGFIRS
Sbjct: 190 KANVGDVAIAIGETGWPTNGNYGAGPSLALTYNLNFKNHITSGKGTPMMPNIYIEGFIRS 249

Query: 111 LFNENEKPEGESQFYGMFHVDSTPIY 137
           LFNENEKPEGESQFYGMFH+D TPIY
Sbjct: 250 LFNENEKPEGESQFYGMFHIDFTPIY 275

[Close]

BLAST of Cucsa.142770 vs. NCBI nr
Match: gi|700211194|gb|KGN66290.1| (hypothetical protein Csa_1G595910 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 1.6e-38
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 1


Query: 51  QADVGDVAIAIGETGWPTQGNYGAGPSLALTYNLNFNNPITSGKGTPMKPNVYIEGFIRS 110
           +A+VGDVAIAIGETGWPT GNYGAGPSLALTYNLNF N ITSGKGTPM PN+YIEGFIRS
Sbjct: 190 KANVGDVAIAIGETGWPTNGNYGAGPSLALTYNLNFKNHITSGKGTPMMPNIYIEGFIRS 249

Query: 111 LFNENEKPEGESQFYGMFHVDSTPIY 137
           LFNENEKPEGESQFYGMFH+D TPIY
Sbjct: 250 LFNENEKPEGESQFYGMFHIDFTPIY 275

[Close]

BLAST of Cucsa.142770 vs. NCBI nr
Match: gi|659100571|ref|XP_008451158.1| (PREDICTED: uncharacterized protein LOC103492536 [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 8.1e-35
Identity = 71/86 (82.56%), Postives = 77/86 (89.53%), Query Frame = 1


Query: 51  QADVGDVAIAIGETGWPTQGNYGAGPSLALTYNLNFNNPITSGKGTPMKPNVYIEGFIRS 110
           +A+VGDV I IGETGWPT GNYG  PSLA TYN NF N I+SGKGTPMKPN+YIEGFIRS
Sbjct: 566 KANVGDVPIVIGETGWPTNGNYGGSPSLAATYNRNFKNHISSGKGTPMKPNIYIEGFIRS 625

Query: 111 LFNENEKPEGESQFYGMFHVDSTPIY 137
           LFNENEKPEGES+FYGMF+VDSTPIY
Sbjct: 626 LFNENEKPEGESRFYGMFNVDSTPIY 651

The following BLAST results are available for this feature:

BLAST of Cucsa.142770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BG5_ARATH	1.1e-15	43.81	Probable glucan endo-1,3-beta-glucosidase BG5 OS=Arabidopsis thaliana GN=BG5 PE=...	[more]
BG4_ARATH	4.2e-15	41.90	Probable glucan endo-1,3-beta-glucosidase BG4 OS=Arabidopsis thaliana GN=BG4 PE=...	[more]
E13B_WHEAT	8.7e-13	45.35	Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1	[more]
E1314_ARATH	4.8e-11	43.53	Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500 PE=1 SV...	[more]
EA6_ARATH	2.6e-09	32.17	Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 ...	[more]

BLAST of Cucsa.142770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR03_CUCSA	1.7e-39	91.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416760 PE=3 SV=1	[more]
A0A0A0LWM4_CUCSA	1.1e-38	89.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G595910 PE=3 SV=1	[more]
A0A0A0LZ10_CUCSA	1.6e-21	50.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G595900 PE=3 SV=1	[more]
M5VS03_PRUPE	2.0e-16	45.19	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015919mg PE=3 SV=1	[more]
M5VT74_PRUPE	2.0e-16	49.43	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020193mg PE=3 S...	[more]

BLAST of Cucsa.142770 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20340.1	6.2e-17	43.81	beta-1,3-glucanase 5	[more]
AT5G20330.1	2.4e-16	41.90	beta-1,3-glucanase 4	[more]
AT3G46570.1	3.4e-15	39.32	Glycosyl hydrolase superfamily protein	[more]
AT5G20390.1	4.4e-15	38.53	Glycosyl hydrolase superfamily protein	[more]
AT1G33220.1	4.9e-14	41.35	Glycosyl hydrolase superfamily protein	[more]

BLAST of Cucsa.142770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778665355\|ref\|XP_011648543.1\|	1.2e-41	84.47	PREDICTED: glucan endo-1,3-beta-glucosidase-like [Cucumis sativus]	[more]
gi\|778674443\|ref\|XP_004153772.2\|	2.4e-39	91.86	PREDICTED: lichenase-2-like [Cucumis sativus]	[more]
gi\|778665333\|ref\|XP_004144115.2\|	1.6e-38	89.53	PREDICTED: lichenase-2-like [Cucumis sativus]	[more]
gi\|700211194\|gb\|KGN66290.1\|	1.6e-38	89.53	hypothetical protein Csa_1G595910 [Cucumis sativus]	[more]
gi\|659100571\|ref\|XP_008451158.1\|	8.1e-35	82.56	PREDICTED: uncharacterized protein LOC103492536 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000490	Glyco_hydro_17
IPR013781	Glycoside hydrolase, catalytic domain
IPR017853	Glycoside_hydrolase_SF

Vocabulary: **Molecular Function**
Term	Definition
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.142770.1	Cucsa.142770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000490	Glycoside hydrolase family 17	PFAM	PF00332	Glyco_hydro_17	coord: 33..136 score: 2.4
IPR000490	Glycoside hydrolase family 17	PROSITE	PS00587	GLYCOSYL_HYDROL_F17	coord: 57..70 scor
IPR013781	Glycoside hydrolase, catalytic domain	GENE3D	G3DSA:3.20.20.80		coord: 39..136 score: 6.6
IPR017853	Glycoside hydrolase superfamily	unknown	SSF51445	(Trans)glycosidases	coord: 43..136 score: 3.34
None	No IPR available	PANTHER	PTHR32227	FAMILY NOT NAMED	coord: 55..136 score: 2.0
None	No IPR available	PANTHER	PTHR32227:SF54	BETA-1, 3-GLUCANASE-LIKE PROTEIN-RELATED	coord: 55..136 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.142770	Melon (DHL92) v3.6.1	cgymedB235
Cucsa.142770	Silver-seed gourd	carcgyB0212
Cucsa.142770	Silver-seed gourd	carcgyB0539
Cucsa.142770	Silver-seed gourd	carcgyB0599
Cucsa.142770	Silver-seed gourd	carcgyB1039
Cucsa.142770	Cucumber (Chinese Long) v3	cgycucB213
Cucsa.142770	Watermelon (97103) v2	cgywmbB241
Cucsa.142770	Wax gourd	cgywgoB280
Cucsa.142770	Wax gourd	cgywgoB282
Cucsa.142770	Cucurbita maxima (Rimu)	cgycmaB0395
Cucsa.142770	Cucurbita maxima (Rimu)	cgycmaB0396
Cucsa.142770	Cucurbita maxima (Rimu)	cgycmaB0398
Cucsa.142770	Cucurbita maxima (Rimu)	cgycmaB0399
Cucsa.142770	Cucurbita moschata (Rifu)	cgycmoB0395
Cucsa.142770	Cucurbita moschata (Rifu)	cgycmoB0396
Cucsa.142770	Cucurbita moschata (Rifu)	cgycmoB0398
Cucsa.142770	Cucurbita moschata (Rifu)	cgycmoB0399
Cucsa.142770	Wild cucumber (PI 183967)	cgycpiB208
Cucsa.142770	Cucumber (Chinese Long) v2	cgycuB205
Cucsa.142770	Melon (DHL92) v3.5.1	cgymeB238
Cucsa.142770	Watermelon (Charleston Gray)	cgywcgB242
Cucsa.142770	Watermelon (97103) v1	cgywmB251
Cucsa.142770	Cucurbita pepo (Zucchini)	cgycpeB0382
Cucsa.142770	Cucurbita pepo (Zucchini)	cgycpeB0385
Cucsa.142770	Cucurbita pepo (Zucchini)	cgycpeB0386
Cucsa.142770	Bottle gourd (USVL1VR-Ls)	cgylsiB230