Cucsa.142250 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.142250
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	RNA binding protein, putative
Location	scaffold01079 : 530693 .. 535910 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGCCGCCTCTCTTCTTGTTCTTGTTCTTCTTCTTCTACACCTACACCCCTTTTTCCTATTCTATTCGATCATTCTTGGAAACCCCACATTTTCTTTGATCAAAAAACTCTTCCTTTTCCTCTACATTTTACCCCCTTTCCCCCCTTTTTCCTTCACTGATACGTGGGCCTTCTTTATTTTCTCTAATCGCCTATTGGGTTAGTTTTGATTCATCCCTTTTCGTTTTTTCTTCCCTTTGTGTTTTTGGAGCTTTTGCGATACTGATTTTTTTGATCAAGTTGTGTTTCTTTAGGACCCTTTTTCTGATTTTGATGATCGAAGGTTATTTCGGTGTGTTTTGCGATTTTTCTATGTCTATTTATTTACTGCATTGGTTGTTTTGATTGTTTCGGTACGGTGTTTTTGGTTGATTTTGTTTTTTTTtATTTTTTTGCTTCTTGTCCTTGTGTAGAAGTTTGACTGATATTCAGAAGGATTTTGTTCTTGTTTCTTTTAATCTCTATGAATGGTCTGTTTTCACTGTGATTGAAGGGCTCTATTAGTGAGATCGTCACAAATTTGTGGGTTAGGTGATTTGGATTGTGATTGTTGGGTTTTGTTCAATATTTTCATTGTTCTTTATCTGGGTTGTGGGATAGCAGTGATTGGTTGCTTTTGTACAATGTAGGTTGGAGATTTGTTCAAATTATGATCTGATCTTTGATGCTAAAAAGTGTGTGTGTTTTGCTGCTTGGCAGGCGAAGATAGAAACGTTTGTGTGTCACTGTATCATTTATTCTTTAAGTGAGGGGTTTGCTTTTGTTACCTTTTGGTACAGTGAGTTTTTTGTGAGTTAGTTACAACAATGGAAGAGATGCCTAATGAAAATGAATTCGAAGACATTGCGAAATATATTGGCAATCAGATTCCTAATGTTGCATCTGGTAATGCAGATCCTGAAGGTTTGTCATCAATATCTGTGAGTTCGTATGAAGGATCTTCCATGAGAGATTACCATAGCAACGGGAACTTGATGGATGGAAATATCTCTATGAGTACACTCCAGCAATCATCTATGGATCACACTTCAACTAGGCAAAATTTTGTACCGGGCGATCAGTCATTGACTCGTGCATTTGAAAAGTTAAACTTTGGTGATGAGTCGAAGGTGCGTGCTTGGAAGTCTCGTGCCATTCTGTTGGAAAACCATTACTCGGACAACTTGAGCAAACAGTTACAGAATATCGATCCGTCAGTGTTTGCTGCTTGGAGTTCTTCAAATCACTTGACTAATGGTGTTCATGATTCCCATTCGACAAGACTTGGCCACCAAAACTCTCCTTCCAGATATATACCTGAACAGTACAAGAAGTGGCAAACTGGTCAACTTCAGCCATTTGAGTCTTTGTCCCCTAATGCACATTTAACCCATGAGGTGGCTAATGTGTCTGGTCCGAATTCACAGTTCCCAATTGCATCTCAAAGGCAGCAAGTTCTCCACAATGGGCGACGTTGCATACATCCACAACAGATGAATCATCGTCAAGTTGGTTGGAATTATGCTGAGGAAGACCAGTTGTACAGGATGCATGAGCAGCATCCATACCTGCAGCATCTTCATAACCAGCAATTGGAACGTCTGCTTCCAATTCAACAACATGAAAACATTGCAGGTAGGATTTCAAGTCAGAATCGTAAGCCTCAATATTACGAGGTTCCAATTGCTCACCATCTTGAACAGTCTAATCATGAACCAACATGGAAGCCGAGTGCATTTTGTAGGGGTTCAAACCAGTTAAATTCTGTATTTTCAACACACTATATGGACACAGTTCAAGGTATGGAAAAAGTTTCCTTTCCTAGAAaGATCCTTGGTAGAAGTCCTGGAATGAACACTGTTGATGCTATGAGGTTTATGTCTATGGATGCTGATAAATCATCCAATCATGTCAACCAATGTAGATTTCTCCGCCCAAATAGCTTTTTTCGGCCCAACAATTTGTCTACAGCTAATGAATGCATGTGTCGTGATCACTCTTCTGCTATGTACTCAGAATCTCCAAGTCTTAAGTTAGTGCCGGAGAGATTTAATTCTGTTGATGAAGTTCGGGGTAGAATATTTCTCATGGCTAAAGACCAACATGGTTGTCGTTTCTTGCAACGGAAATTTATGGAGGGTACTGATGAAGATATTGAGAAAATTTTCAAAGAAATTATTGATCGTGTTGTTGAACTCATGATGGATGCTTTCGGAAATTATTTAGTACAGAAGCTGCTTGAAGTTTGCAATGACAATCAGCGGATGCAAATCCTACGTAGAATTACACAGAACCATGGTGAACTTGTTATGATTTCATGTGACATGCATGGGTATGCTCTTTTCTTTTCATTTCTGATACCCCTCATGGATTAAACACGAGCATTCGTCAAAGTCATTGTATTTCCTTTTATTGTTTATTAATTCTCTTCCAATATCTTCTATCTTAACGACAGGACTCGTGCTATTCAAAAGGTTATTGAAACCCTTAAAACCCAAGAGCAAGTTCACATGATTGTCTCAGCTTTGAAGTCTGGTATAGTGACTCTGATGAAAAATATAAATGGCAACCATGTGGCACAACATTGCCTTGATTATTTGATGCCTAGTTGCCGTGAGGTGAGGATTCTATTTTCTAGATCTGTTATTTTGACTTTGTCTGTTTCAAGCGTGAAGGCACTCACCTAACCTGTTGTTTAGAGTTTAGGCAAAGAACACTATCGGTATCTGTTTAATCATAGGGAATTGTAAAATAAATTCCATGTGTGATGCAACAAAGTAATATTTTTATTTGAAATTTTCTTCCCTTTTAGTTCATCTTTCTGGGGATCTTTGCTATTCGCTTTCAGATTATTCCTTTGGTTATTTCCAATTCCAGAAAAAGAAAGTCTTCAAAAGTCTTTGGTAGGCCTTCTACTTAGTTGAGTATGAGGAGAGGAAGGAATGACAGCCTAGATAAGTCTACTGCGAGCAGCAGCAAAATTTTAAAGGAAATAGTTTGAAGGGTAGAATGACATGAAGCAAGGAAAGGAATTAATGGAAAATCTGAGAGCAGAGTCCAACTTGTTGGGAGTATCTGAGTAGGGGGAGGACACTCTTAATATTCTTTCCAGCTTTCTACTTCCTCTCAATCTTTAGATTTCTTCCAATGCTTTCTCAGTCTTTTCCATAGTAAACACTTGTATATCCATATCATTAAATTGGCAAAATAATAATGATGTGAATATGCTTTAGGGTCAGGTGAGCAGAGCGTTGTAGCCAGTTTGAGAGTTTATGATAAATTAAACACTTGTATATTCATCAATTGATATGCTTGAATGACTTTTAGACTTTTGGTTTTtCTACTTGCAAGATAGAAGATTCATATTAAAAGTTGGGGTTCATTAGAGTGCATTAGTTCATTCATTGTGCATCTATCACCCGTACTTGGATCTTTCCTAATACTTTCTTCCTGAGGTCTGAATATTCCAGGATTCAAACTTCTTCTCTTCATCATCATTTAGATATAAAAATTTATTGGTGGATTAAGAGTCATTGCATGTTTAACAGCTGAATTTCTCTTTTAATTTCTTTCTTTTTTTtATTGTTGATTTCATTGTTAATGGTGTTGTTTCTCATGTGTTCTTGCATCCTTTACCAAATTTACTGGAAATTTTCTGTTCTCTCAAATGCTTGTACTCCCTTTCTCCTTAAAACATAAAAGTGAAAACGTGGTATTCCGTTTCTCTCTCTGTAATCAATTATTTCCATAGATTCTTATATTGTTTTATTAGCAACTATGTGCAGTTGTGTTGTCACGGAATAGAATATCAATTTTAATAACCGTACTTGAACAAGATATGTTCGGTTGTACAACTATGTCCTTAAGTTTTAAGAATACACTTTTAGCTGTATAGATGGTCAAACTATTTTTTGGGCTCAAATTTGGTGAAATTAAAGTAGATATGATTTATTGTGGCAGGACTCATTGACCTTCTTAACCCCTAGCATGTGTAACCCCCTTCTGCTCTTTATCCAGTGGTTATTGATATGAAGAAGGGATCATTTTATAAAATGATTTCTGTGAAACAAAAAGTTAATTCCGGTTATGGCTTTCTCTGCAGTTACTGTTTGATGCTGCAAGAAATAGTTGTGTTGATCTTGCTGTTGATCGCCACGGTTGTTGTGTACTTCAAAAATGCCTCAGTTGTTCCGACAGCACCGACCGTGATAATTTAATCAATGAGATCACCCAAAATGCTCTGATTATTTCCCAAGATCAATATGGGTAATTTTATGCTCTCCCTTTCTTTTCTTTGTTTTTTTCCTCTAATCCTTTTTtAAGTTCTAAATCTACTTTGTTTCTTGTACCTTTGGTTTGTGTTCATTTTGGTCTTTTAAAATGTTTATTTTTTCATTTTGGTTCTTGTACTTTCAACTTTCTTTCATTCAGTCTTGTACTGTCAAGATGTTCGTCGTGGGCTTCATTCTTTTAAATTCGGACAATTTTGGTGTCTTTATTTCATTTGAAATTTTGACATGACAGTTCGTCACTATATTTTTAAAATTGAAGCCATAACTTATTGTGTATAAAACCCAAGTTAAATTTTGTGTAAATATAGGGATCAAGTACGATGAACTAGAACTGACAAATAAAATTTCTCTAAATTTAATTACATGCAGGAACTATGTTGTACAGTTCATCCTCAAGCTTAATCTTCGATGGGCTACAGAAGCTATACTCAAACAGCTAGAGGGTAATTATGGGGACTTGTCCATGCAGAAGTATAGTAGCAACGTTGTTGAAAAATGCCTGCAATTTGCGGGAGGACAAATTACTAAAATTGTGCTTGAATTGATTAACGATCCCCGATTTGATAAAATCATGCAGGACCCATATGGCAATTATGCGATTCAAACTGCTTTGAATAATACTGAGGTTAGCAGGGCCAAGATTACCCTTTTCCTTTTGGTATCTATGTTCATGTATGAGAAATATGTTCATTTACCTTCTAGCAAACGTTTTCCAAAGAAGATTTATTGCCTTCTACAAGTGATTGTCAAACTGATTACTAATGTAGTTGTAACAATGCTTGCCTATTTGCCATGTCAGGGTACTCTTCATACTAAATTGGTGGAAGCCATAAGGCCACACGTTCCGGTACTAAGGATGAGTCCATATGGGAAAAAAGTCCTTGCAATAGTTGGAAAATCTAATTAA

mRNA sequence

cacgccgcctctcttcttgttcttgttcttcttcttctACACCTACACCCCTTTTTCCTATTCTATTCGATCATTCTTGGAAACCCCACATTTTCTTTGATCAAAAAACTCTTCCTTTTCCTCTACATTTTACCCCCTTTCCCCCCTTTTTCCTTCACTGATACGTGGGCCTTCTTTATTTTCTCTAATCGCCTATTGGATCCTGAAGGTTTGTCATCAATATCTGTGAGTTCGTATGAAGGATCTTCCATGAGAGATTACCATAGCAACGGGAACTTGATGGATGGAAATATCTCTATGAGTACACTCCAGCAATCATCTATGGATCACACTTCAACTAGGCAAAATTTTGTACCGGGCGATCAGTCATTGACTCGTGCATTTGAAAAGTTAAACTTTGGTGATGAGTCGAAGGTGCGTGCTTGGAAGTCTCGTGCCATTCTGTTGGAAAACCATTACTCGGACAACTTGAGCAAACAGTTACAGAATATCGATCCGTCAGTGTTTGCTGCTTGGAGTTCTTCAAATCACTTGACTAATGGTGTTCATGATTCCCATTCGACAAGACTTGGCCACCAAAACTCTCCTTCCAGATATATACCTGAACAGTACAAGAAGTGGCAAACTGGTCAACTTCAGCCATTTGAGTCTTTGTCCCCTAATGCACATTTAACCCATGAGGTGGCTAATGTGTCTGGTCCGAATTCACAGTTCCCAATTGCATCTCAAAGGCAGCAAGTTCTCCACAATGGGCGACGTTGCATACATCCACAACAGATGAATCATCGTCAAGTTGGTTGGAATTATGCTGAGGAAGACCAGTTGTACAGGATGCATGAGCAGCATCCATACCTGCAGCATCTTCATAACCAGCAATTGGAACGTCTGCTTCCAATTCAACAACATGAAAACATTGCAGGTAGGATTTCAAGTCAGAATCGTAAGCCTCAATATTACGAGGTTCCAATTGCTCACCATCTTGAACAGTCTAATCATGAACCAACATGGAAGCCGAGTGCATTTTGTAGGGGTTCAAACCAGTTAAATTCTGTATTTTCAACACACTATATGGACACAGTTCAAGGTATGGAAAAAGTTTCCTTTCCTAGAAAGATCCTTGGTAGAAGTCCTGGAATGAACACTGTTGATGCTATGAGGTTTATGTCTATGGATGCTGATAAATCATCCAATCATGTCAACCAATGTAGATTTCTCCGCCCAAATAGCTTTTTTCGGCCCAACAATTTGTCTACAGCTAATGAATGCATGTGTCGTGATCACTCTTCTGCTATGTACTCAGAATCTCCAAGTCTTAAGTTAGTGCCGGAGAGATTTAATTCTGTTGATGAAGTTCGGGGTAGAATATTTCTCATGGCTAAAGACCAACATGGTTGTCGTTTCTTGCAACGGAAATTTATGGAGGGTACTGATGAAGATATTGAGAAAATTTTCAAAGAAATTATTGATCGTGTTGTTGAACTCATGATGGATGCTTTCGGAAATTATTTAGTACAGAAGCTGCTTGAAGTTTGCAATGACAATCAGCGGATGCAAATCCTACGTAGAATTACACAGAACCATGGTGAACTTGTTATGATTTCATGTGACATGCATGGGACTCGTGCTATTCAAAAGGTTATTGAAACCCTTAAAACCCAAGAGCAAGTTCACATGATTGTCTCAGCTTTGAAGTCTGGTATAGTGACTCTGATGAAAAATATAAATGGCAACCATGTGGCACAACATTGCCTTGATTATTTGATGCCTAGTTGCCGTGAGTTACTGTTTGATGCTGCAAGAAATAGTTGTGTTGATCTTGCTGTTGATCGCCACGGTTGTTGTGTACTTCAAAAATGCCTCAGTTGTTCCGACAGCACCGACCGTGATAATTTAATCAATGAGATCACCCAAAATGCTCTGATTATTTCCCAAGATCAATATGGGAACTATGTTGTACAGTTCATCCTCAAGCTTAATCTTCGATGGGCTACAGAAGCTATACTCAAACAGCTAGAGGGTAATTATGGGGACTTGTCCATGCAGAAGTATAGTAGCAACGTTGTTGAAAAATGCCTGCAATTTGCGGGAGGACAAATTACTAAAATTGTGCTTGAATTGATTAACGATCCCCGATTTGATAAAATCATGCAGGACCCATATGGCAATTATGCGATTCAAACTGCTTTGAATAATACTGAGGGTACTCTTCATACTAAATTGGTGGAAGCCATAAGGCCACACGTTCCGGTACTAAGGATGAGTCCATATGGGAAAAAAGTCCTTGCAATAGTTGGAAAATCTAATTAA

Coding sequence (CDS)

ATGAGAGATTACCATAGCAACGGGAACTTGATGGATGGAAATATCTCTATGAGTACACTCCAGCAATCATCTATGGATCACACTTCAACTAGGCAAAATTTTGTACCGGGCGATCAGTCATTGACTCGTGCATTTGAAAAGTTAAACTTTGGTGATGAGTCGAAGGTGCGTGCTTGGAAGTCTCGTGCCATTCTGTTGGAAAACCATTACTCGGACAACTTGAGCAAACAGTTACAGAATATCGATCCGTCAGTGTTTGCTGCTTGGAGTTCTTCAAATCACTTGACTAATGGTGTTCATGATTCCCATTCGACAAGACTTGGCCACCAAAACTCTCCTTCCAGATATATACCTGAACAGTACAAGAAGTGGCAAACTGGTCAACTTCAGCCATTTGAGTCTTTGTCCCCTAATGCACATTTAACCCATGAGGTGGCTAATGTGTCTGGTCCGAATTCACAGTTCCCAATTGCATCTCAAAGGCAGCAAGTTCTCCACAATGGGCGACGTTGCATACATCCACAACAGATGAATCATCGTCAAGTTGGTTGGAATTATGCTGAGGAAGACCAGTTGTACAGGATGCATGAGCAGCATCCATACCTGCAGCATCTTCATAACCAGCAATTGGAACGTCTGCTTCCAATTCAACAACATGAAAACATTGCAGGTAGGATTTCAAGTCAGAATCGTAAGCCTCAATATTACGAGGTTCCAATTGCTCACCATCTTGAACAGTCTAATCATGAACCAACATGGAAGCCGAGTGCATTTTGTAGGGGTTCAAACCAGTTAAATTCTGTATTTTCAACACACTATATGGACACAGTTCAAGGTATGGAAAAAGTTTCCTTTCCTAGAAaGATCCTTGGTAGAAGTCCTGGAATGAACACTGTTGATGCTATGAGGTTTATGTCTATGGATGCTGATAAATCATCCAATCATGTCAACCAATGTAGATTTCTCCGCCCAAATAGCTTTTTTCGGCCCAACAATTTGTCTACAGCTAATGAATGCATGTGTCGTGATCACTCTTCTGCTATGTACTCAGAATCTCCAAGTCTTAAGTTAGTGCCGGAGAGATTTAATTCTGTTGATGAAGTTCGGGGTAGAATATTTCTCATGGCTAAAGACCAACATGGTTGTCGTTTCTTGCAACGGAAATTTATGGAGGGTACTGATGAAGATATTGAGAAAATTTTCAAAGAAATTATTGATCGTGTTGTTGAACTCATGATGGATGCTTTCGGAAATTATTTAGTACAGAAGCTGCTTGAAGTTTGCAATGACAATCAGCGGATGCAAATCCTACGTAGAATTACACAGAACCATGGTGAACTTGTTATGATTTCATGTGACATGCATGGGACTCGTGCTATTCAAAAGGTTATTGAAACCCTTAAAACCCAAGAGCAAGTTCACATGATTGTCTCAGCTTTGAAGTCTGGTATAGTGACTCTGATGAAAAATATAAATGGCAACCATGTGGCACAACATTGCCTTGATTATTTGATGCCTAGTTGCCGTGAGTTACTGTTTGATGCTGCAAGAAATAGTTGTGTTGATCTTGCTGTTGATCGCCACGGTTGTTGTGTACTTCAAAAATGCCTCAGTTGTTCCGACAGCACCGACCGTGATAATTTAATCAATGAGATCACCCAAAATGCTCTGATTATTTCCCAAGATCAATATGGGAACTATGTTGTACAGTTCATCCTCAAGCTTAATCTTCGATGGGCTACAGAAGCTATACTCAAACAGCTAGAGGGTAATTATGGGGACTTGTCCATGCAGAAGTATAGTAGCAACGTTGTTGAAAAATGCCTGCAATTTGCGGGAGGACAAATTACTAAAATTGTGCTTGAATTGATTAACGATCCCCGATTTGATAAAATCATGCAGGACCCATATGGCAATTATGCGATTCAAACTGCTTTGAATAATACTGAGGGTACTCTTCATACTAAATTGGTGGAAGCCATAAGGCCACACGTTCCGGTACTAAGGATGAGTCCATATGGGAAAAAAGTCCTTGCAATAGTTGGAAAATCTAATTAA

Protein sequence

MRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHDSHSTRLGHQNSPSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEVANVSGPNSQFPIASQRQQVLHNGRRCIHPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN*

Homology

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BLAST of Cucsa.142250 vs. Swiss-Prot
Match: PUM12_ARATH (Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2)

HSP 1 Score: 411.0 bits (1055), Expect = 2.6e-113
Identity = 231/505 (45.74%), Postives = 314/505 (62.18%), Query Frame = 1


Query: 180 RQVGWNYAEEDQLYRMHEQH--PYLQHLHNQQLERLLPIQQHENIAGRISSQNRKPQYYE 239
           +QVG+       +     QH  P+ Q L + Q        + EN   R+  Q    QY  
Sbjct: 113 QQVGYLPNLSSGISPAQRQHYLPHSQPLSHYQSPMTWRDIEEENFQ-RLKLQEE--QYLS 172

Query: 240 V-PIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSP-G 299
           + P   HL+  +  P      + R      ++F  +  D  + + K+ +P KIL RS   
Sbjct: 173 INPHFLHLQSMDTVPRQDHFDYRRAEQSNRNLF-WNGEDGNESVRKMCYPEKILMRSQMD 232

Query: 300 MNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSL 359
           +NT   +++ + D  ++       R    N       +S  N                 L
Sbjct: 233 LNTAKVIKYGAGDESQNG------RLWLQNQLNEDLTMSLNN-----------------L 292

Query: 360 KLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDA 419
            L P+++NS+ E RG+I+ +AKDQHGCRFLQR F E    DIE IF EIID + ELMMD 
Sbjct: 293 SLQPQKYNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDP 352

Query: 420 FGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHM 479
           FGNYLVQKLLEVCN++QRMQI+  IT+  G L+ ISCDMHGTRA+QK++ET K +E++ +
Sbjct: 353 FGNYLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISI 412

Query: 480 IVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQK 539
           I+SALK GIV L+KN+NGNHV Q CL YL+P C + LF+AA   CV+LA DRHGCCVLQK
Sbjct: 413 IISALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQK 472

Query: 540 CLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDL 599
           CL  S+   + +L++EI  NAL++SQD +GNYV+Q++ +L L+WAT  IL+QLEGNY +L
Sbjct: 473 CLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTEL 532

Query: 600 SMQKYSSNVVEKCLQFAGGQ-ITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLH 659
           SMQK SSNVVEKCL+ A  +   +I+ ELIN  R D++M DPYGNY IQ AL  ++G +H
Sbjct: 533 SMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVH 590

Query: 660 TKLVEAIRPHVPVLRMSPYGKKVLA 680
             LV+AI+ ++  LR +PYGKKVL+
Sbjct: 593 ALLVDAIKLNISSLRTNPYGKKVLS 590

[Close]

BLAST of Cucsa.142250 vs. Swiss-Prot
Match: PUM8_ARATH (Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana GN=APUM8 PE=3 SV=2)

HSP 1 Score: 327.8 bits (839), Expect = 2.9e-88
Identity = 158/320 (49.38%), Postives = 225/320 (70.31%), Query Frame = 1


Query: 360 ERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNY 419
           E    V E +G ++ MAKDQHGCRFLQ  F +G+  D   IF E+I  VVELMMD FGNY
Sbjct: 191 ESLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNY 250

Query: 420 LVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSA 479
           L+QKLL+VCN+ QR QI+  +T   G+L+ IS + +GTR +Q+++E++KT++Q+ ++ SA
Sbjct: 251 LMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSA 310

Query: 480 LKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSC 539
           L+ G + L++++NGNHV Q CL  L     E +F+ A   C+D+A  RHGCCVLQKC++ 
Sbjct: 311 LRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAY 370

Query: 540 SDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQK 599
           S    R+ L+ EI++N+L ++QD YGNY VQF+L+L    A  A+L QL+G+Y +LSMQK
Sbjct: 371 SSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQK 430

Query: 600 YSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVE 659
           +SS++VE+CL        +IV ELI+ P FD ++QDPY N+ IQ AL  T+G+LH  LVE
Sbjct: 431 FSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHATLVE 490

Query: 660 AIRPHVPVLRMSPYGKKVLA 680
            IRPH  +LR +PY K++ +
Sbjct: 491 VIRPH-SILRNNPYCKRIFS 509

[Close]

BLAST of Cucsa.142250 vs. Swiss-Prot
Match: PUM7_ARATH (Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana GN=APUM7 PE=3 SV=2)

HSP 1 Score: 323.9 bits (829), Expect = 4.1e-87
Identity = 154/313 (49.20%), Postives = 223/313 (71.25%), Query Frame = 1


Query: 367 EVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLE 426
           +++G ++LMAKDQHGCRFLQR F EGT  D   IF E+I  VVELMMD FGNYL+QKLL+
Sbjct: 333 DIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLD 392

Query: 427 VCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVT 486
           VC + QR QI+   T+  G+L+ IS + +GTR +Q+++ET+++ +Q+ ++  AL+ G + 
Sbjct: 393 VCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLD 452

Query: 487 LMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRD 546
           L+K++NGNHV Q CL  L     + +FDAA   C ++A  RHGCCVLQKC++ S    R+
Sbjct: 453 LIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQRE 512

Query: 547 NLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVE 606
            LI EI++N+L+++QD +GNY VQF+++L +  A   +L QL+G+Y  LSMQK+SS++VE
Sbjct: 513 KLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVE 572

Query: 607 KCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVP 666
           +CL        +IV EL++ P FD+++QDPY N+ IQ AL  T+G LH  LVE IRPH  
Sbjct: 573 RCLMHCPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAATKGPLHASLVEVIRPH-S 632

Query: 667 VLRMSPYGKKVLA 680
           +LR +PY K++ +
Sbjct: 633 ILRNNPYCKRIFS 644

[Close]

BLAST of Cucsa.142250 vs. Swiss-Prot
Match: PUM11_ARATH (Pumilio homolog 11 OS=Arabidopsis thaliana GN=APUM11 PE=3 SV=2)

HSP 1 Score: 288.1 bits (736), Expect = 2.5e-76
Identity = 141/310 (45.48%), Postives = 214/310 (69.03%), Query Frame = 1


Query: 370 GRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCN 429
           G ++LMAKDQ GCR LQ+   EG   D+  IFKE+I+ V+EL  D FGNYL+QKL+EVCN
Sbjct: 244 GSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCN 303

Query: 430 DNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMK 489
           + QR QIL R+T   G LV IS + +GTR +QK+IET+ T+EQ+ ++ SAL  G ++L +
Sbjct: 304 EEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFR 363

Query: 490 NINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLI 549
            +NGNHV  +CL +  P+  + + +AA   C+++A  RHGCCVLQ+C+S S     + L+
Sbjct: 364 ELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLV 423

Query: 550 NEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCL 609
           +EI++N+L+++QD +GNY+VQ+I++  +      +L +L GNY  L+ QK+ S+VVEKCL
Sbjct: 424 DEISRNSLLLAQDPFGNYLVQYIIEKKVGGVN--VLFELRGNYVKLATQKFGSHVVEKCL 483

Query: 610 QFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLR 669
           ++     ++IV EL++   F  ++QDPY NY IQ AL+ T+G +   LVE +R +   L+
Sbjct: 484 RYYPESRSQIVNELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRASLVEKVRRY-ENLK 543

Query: 670 MSPYGKKVLA 680
           M+PY K++ +
Sbjct: 544 MTPYCKRIFS 550

[Close]

BLAST of Cucsa.142250 vs. Swiss-Prot
Match: PUM9_ARATH (Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.3e-72
Identity = 146/327 (44.65%), Postives = 214/327 (65.44%), Query Frame = 1


Query: 356 KLVPERFN---SVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELM 415
           K+ P+  N   S+ E+ G + LMAKDQ GCR LQ+   EGT  + + I   IID VVEL 
Sbjct: 235 KMSPKSNNDLVSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELS 294

Query: 416 MDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQ 475
           MD FGNY+VQKL +V ++ QR  I+  +T N  EL+ I  + +GTR +QK+IET+KT++Q
Sbjct: 295 MDPFGNYIVQKLFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQ 354

Query: 476 VHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCV 535
           + ++ S LK G + L+K++NGNHV Q CL  L P+  E + +AA   C ++A+ RHGCCV
Sbjct: 355 IALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCV 414

Query: 536 LQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNY 595
           LQ C+S S    R+ L+ EI++N+L +SQD +GNYVVQ+++   +  +   +L Q   +Y
Sbjct: 415 LQCCISNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQV--SAVKLLVQFRMHY 474

Query: 596 GDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGT 655
            +L+ QK+SS+V+EKCL+       +IV EL+  P F+ ++QDPY NY IQTAL+ T+G 
Sbjct: 475 AELATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQDPYANYVIQTALSVTKGP 534

Query: 656 LHTKLVEAIRPHVPVLRMSPYGKKVLA 680
           +  KLV  +  +   L  SPY KK+ +
Sbjct: 535 VRAKLVAKVYRY-GKLHSSPYCKKIFS 558

[Close]

BLAST of Cucsa.142250 vs. TrEMBL
Match: A0A0A0LX44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599470 PE=4 SV=1)

HSP 1 Score: 1209.9 bits (3129), Expect = 0.0e+00
Identity = 612/685 (89.34%), Postives = 618/685 (90.22%), Query Frame = 1


Query: 1   MRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWK 60
           MRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWK
Sbjct: 28  MRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWK 87

Query: 61  SRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHDSHSTRLGHQNSPSRYIPEQ 120
           SRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHDSHSTRLGHQNSPSRYIPEQ
Sbjct: 88  SRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHDSHSTRLGHQNSPSRYIPEQ 147

Query: 121 YKKWQTGQLQPFESLSPNAHLTHEVANVSGPNSQFPIASQRQQVLHNGRRCIHPQQMNHR 180
           YKKWQ                       +G    F   S    + H       P      
Sbjct: 148 YKKWQ-----------------------TGQLQPFESLSPNAHLTHEVANVSGPNSQ--- 207

Query: 181 QVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIAGRISSQNRKPQYYEVPI 240
              +  A +    R    H   + +H QQLERLLPIQQHENIAGRISSQNRKPQYYEVPI
Sbjct: 208 ---FPIASQ----RQQVLHNGRRCIHPQQLERLLPIQQHENIAGRISSQNRKPQYYEVPI 267

Query: 241 AHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVD 300
           AHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVD
Sbjct: 268 AHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVD 327

Query: 301 AMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPE 360
           AMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPE
Sbjct: 328 AMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPE 387

Query: 361 RFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYL 420
           RFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYL
Sbjct: 388 RFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYL 447

Query: 421 VQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSAL 480
           VQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSAL
Sbjct: 448 VQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSAL 507

Query: 481 KSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCS 540
           KSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCS
Sbjct: 508 KSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCS 567

Query: 541 DSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKY 600
           DSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKY
Sbjct: 568 DSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKY 627

Query: 601 SSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEA 660
           SSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEA
Sbjct: 628 SSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEA 679

Query: 661 IRPHVPVLRMSPYGKKVLAIVGKSN 686
           IRPHVPVLRMSPYGKKVLAIVGKSN
Sbjct: 688 IRPHVPVLRMSPYGKKVLAIVGKSN 679

[Close]

BLAST of Cucsa.142250 vs. TrEMBL
Match: M5W697_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001655mg PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 8.2e-175
Identity = 348/718 (48.47%), Postives = 458/718 (63.79%), Query Frame = 1


Query: 5   HSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNF---------GDESK 64
           H+NG   +G  S+  +Q+S +         +P D+SLT AF  L+F           E  
Sbjct: 61  HTNGRRNEGKNSVKKIQKSPVARGQPEVANLPDDRSLTSAFAGLSFDGGVTVEAGSHEET 120

Query: 65  VRAWKSRAILLENHYSDNLSKQLQNIDPSVFA--AWSSSNHLTNGVHDSHSTRLGHQNSP 124
            ++ ++ +  L     ++L   + + D  V    ++ + N+   G ++   T +G ++S 
Sbjct: 121 CKSMQNFSFSLNGQIPNSLKTHISDSDAPVMVVPSFQAPNNTPCGFYEFDVTNIGQESSN 180

Query: 125 -SRYIPEQYKKWQTGQLQPFESLSPNAHLTHEV------ANVSGPNSQFPIASQRQQVLH 184
            S++  E+ KK Q    QP E+LS    L H V      +NV GP  QFP+ S  QQ   
Sbjct: 181 MSKFNSEELKKPQVVYSQPMETLSSAVPLAHAVQGFQFLSNVPGPGLQFPLTSDPQQFFL 240

Query: 185 NGRRCI---HPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIA 244
           + +  I     QQ+N  QV W   EE+Q YRM +++ Y+Q LH+Q+LE    +Q   NIA
Sbjct: 241 DAQSRIPYLRSQQLNQNQVSWRNMEEEQYYRMQQRYVYMQQLHDQRLEAQHLVQGSGNIA 300

Query: 245 GRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKV 304
            R++  N +  ++EVPI+H LEQSN E         RG +Q N   S   ++ +Q  +KV
Sbjct: 301 SRLTCPNPRHPHFEVPISHRLEQSNQERVRNNYVIPRGPHQSNPALSYTDLNGIQVFDKV 360

Query: 305 ---SFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECM 364
              SFP KIL RS GMNT+ A++F ++ AD+S  HV+    +  N  FR +  ST N   
Sbjct: 361 GKQSFPEKILTRSHGMNTLKAVKFGAVGADESLAHVSHNGKVLSNGHFR-HTFSTQNTGC 420

Query: 365 CRDHSSAMYSESPSL------------------KLVPERFNSVDEVRGRIFLMAKDQHGC 424
            +  S + +   PSL                  K +P+++NS+DE+ GRI+LMAKDQHGC
Sbjct: 421 FQLDSLSTWGMFPSLMHLKNTDMKALPQKYTDMKALPQKYNSMDEITGRIYLMAKDQHGC 480

Query: 425 RFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQ 484
           RFLQRKF EG  +D+E IF EIID +VELM D FGNYL+QKLLEVC + Q+MQIL  IT+
Sbjct: 481 RFLQRKFSEGAQKDVENIFFEIIDHIVELMTDPFGNYLIQKLLEVCGEVQKMQILHSITK 540

Query: 485 NHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLD 544
             GELV ISCDMHGTRA+QKVIETLKT EQ  M+VS+LK GIVTL+KN NGNHVAQ CL 
Sbjct: 541 KPGELVRISCDMHGTRAVQKVIETLKTLEQFSMVVSSLKPGIVTLIKNTNGNHVAQRCLQ 600

Query: 545 YLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQD 604
           YL P  RE LF+AA  +CV+LA DRHGCCVLQKCLS SD+  R+ LI EIT NALI+SQD
Sbjct: 601 YLTPEYREFLFEAATTNCVELATDRHGCCVLQKCLSHSDAEQRNRLICEITSNALILSQD 660

Query: 605 QYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQ-ITKIVL 664
            +GNYVVQF+ +L L WAT  IL QLEGNYGDLS+QKYSSNVVEK L++AG +   +IV 
Sbjct: 661 PFGNYVVQFVFELQLPWATVDILDQLEGNYGDLSVQKYSSNVVEKSLKYAGEERRVRIVQ 720

Query: 665 ELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 680
           ELI +PR D+IMQDPYGNY IQ AL+ ++GT H+KL++AI+PHVPVLR SPYGKK+L+
Sbjct: 721 ELIENPRLDQIMQDPYGNYVIQAALSQSKGTFHSKLMDAIKPHVPVLRTSPYGKKILS 777

[Close]

BLAST of Cucsa.142250 vs. TrEMBL
Match: M5WJ63_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001655mg PE=4 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 1.5e-173
Identity = 348/719 (48.40%), Postives = 458/719 (63.70%), Query Frame = 1


Query: 5   HSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNF---------GDESK 64
           H+NG   +G  S+  +Q+S +         +P D+SLT AF  L+F           E  
Sbjct: 61  HTNGRRNEGKNSVKKIQKSPVARGQPEVANLPDDRSLTSAFAGLSFDGGVTVEAGSHEET 120

Query: 65  VRAWKSRAILLENHYSDNLSKQLQNIDPSVFA--AWSSSNHLTNGVHDSHSTRLGHQNSP 124
            ++ ++ +  L     ++L   + + D  V    ++ + N+   G ++   T +G ++S 
Sbjct: 121 CKSMQNFSFSLNGQIPNSLKTHISDSDAPVMVVPSFQAPNNTPCGFYEFDVTNIGQESSN 180

Query: 125 -SRYIPEQYKKWQTGQLQPFESLSPNAHLTHEV------ANVSGPNSQFPIASQRQQVLH 184
            S++  E+ KK Q    QP E+LS    L H V      +NV GP  QFP+ S  QQ   
Sbjct: 181 MSKFNSEELKKPQVVYSQPMETLSSAVPLAHAVQGFQFLSNVPGPGLQFPLTSDPQQFFL 240

Query: 185 NGRRCI---HPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIA 244
           + +  I     QQ+N  QV W   EE+Q YRM +++ Y+Q LH+Q+LE    +Q   NIA
Sbjct: 241 DAQSRIPYLRSQQLNQNQVSWRNMEEEQYYRMQQRYVYMQQLHDQRLEAQHLVQGSGNIA 300

Query: 245 GRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKV 304
            R++  N +  ++EVPI+H LEQSN E         RG +Q N   S   ++ +Q  +KV
Sbjct: 301 SRLTCPNPRHPHFEVPISHRLEQSNQERVRNNYVIPRGPHQSNPALSYTDLNGIQVFDKV 360

Query: 305 ---SFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECM 364
              SFP KIL RS GMNT+ A++F ++ AD+S  HV+    +  N  FR +  ST N   
Sbjct: 361 GKQSFPEKILTRSHGMNTLKAVKFGAVGADESLAHVSHNGKVLSNGHFR-HTFSTQNTGC 420

Query: 365 CRDHSSAMYSESPSL------------------KLVPERFNSVDEVRGRIFLMAKDQHGC 424
            +  S + +   PSL                  K +P+++NS+DE+ GRI+LMAKDQHGC
Sbjct: 421 FQLDSLSTWGMFPSLMHLKNTDMKALPQKYTDMKALPQKYNSMDEITGRIYLMAKDQHGC 480

Query: 425 RFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQ 484
           RFLQRKF EG  +D+E IF EIID +VELM D FGNYL+QKLLEVC + Q+MQIL  IT+
Sbjct: 481 RFLQRKFSEGAQKDVENIFFEIIDHIVELMTDPFGNYLIQKLLEVCGEVQKMQILHSITK 540

Query: 485 NHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLD 544
             GELV ISCDMHGTRA+QKVIETLKT EQ  M+VS+LK GIVTL+KN NGNHVAQ CL 
Sbjct: 541 KPGELVRISCDMHGTRAVQKVIETLKTLEQFSMVVSSLKPGIVTLIKNTNGNHVAQRCLQ 600

Query: 545 YLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQD 604
           YL P  RE LF+AA  +CV+LA DRHGCCVLQKCLS SD+  R+ LI EIT NALI+SQD
Sbjct: 601 YLTPEYREFLFEAATTNCVELATDRHGCCVLQKCLSHSDAEQRNRLICEITSNALILSQD 660

Query: 605 QYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQ-ITKIVL 664
            +GNYVVQF+ +L L WAT  IL QLEGNYGDLS+QKYSSNVVEK L++AG +   +IV 
Sbjct: 661 PFGNYVVQFVFELQLPWATVDILDQLEGNYGDLSVQKYSSNVVEKSLKYAGEERRVRIVQ 720

Query: 665 ELINDPRFDKIMQDPYGNYAIQTALNNT-EGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 680
           ELI +PR D+IMQDPYGNY IQ AL+ + +GT H+KL++AI+PHVPVLR SPYGKK+L+
Sbjct: 721 ELIENPRLDQIMQDPYGNYVIQAALSQSKQGTFHSKLMDAIKPHVPVLRTSPYGKKILS 778

[Close]

BLAST of Cucsa.142250 vs. TrEMBL
Match: U5GNJ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s03990g PE=4 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 2.6e-173
Identity = 344/696 (49.43%), Postives = 448/696 (64.37%), Query Frame = 1


Query: 6   SNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWKSRAIL 65
           SNG+L D  I  +  QQS   +  + +  +P DQSLT AF +L+F   S +  +KS  + 
Sbjct: 62  SNGSLDDRQILANKTQQSPTTNAQSEEANLPDDQSLTLAFAELSFNSGSPLANYKS--LP 121

Query: 66  LENHYSDNLSKQLQNIDPSVFAA--WSSSNHLTNGVHDSHSTRLGHQNSPS-RYIPEQYK 125
             + Y++ ++  L N D S  AA  + S N+L +G    ++ ++ H+ S   ++   + K
Sbjct: 122 NPSVYTNTMNSSLSNTDSSTMAAPPYQSPNNLPSGFDKFNAVKVCHEQSNFIKFDAREQK 181

Query: 126 KWQTGQLQP-----FESLSPNAHLTHE---VANVSGPNSQFPIASQRQQVLHNGRRC--- 185
           K  T   QP     F +  P  H       ++N++ P   FP+ S  QQ   + +     
Sbjct: 182 KVPTDFCQPHPIKKFSTALPPTHGMQGFQLLSNMAVPGMDFPLMSDHQQYFTDVQPSLPY 241

Query: 186 IHPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIAGRISSQNR 245
           +H QQ+N   + W   EE+Q YRMH+Q  YLQ L NQ+LE   P   + N+  ++ S+N 
Sbjct: 242 VHSQQLNRSHINWRNIEEEQCYRMHQQCLYLQQLRNQRLEAQNPTSANGNVETKLMSRNV 301

Query: 246 KPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILG 305
           +  Y EVP +H L+QSN E  W   A  RG NQ     S + +  +  + K SFP KIL 
Sbjct: 302 RQPYLEVPFSHQLQQSNQETFWSNYAVTRGLNQ-----SQNGIRVLDKVGKQSFPEKILT 361

Query: 306 RSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAM--- 365
           RS G+NT+ A++F S+  ++S  H+N    L  N+    +  +    C   D  S+    
Sbjct: 362 RSQGLNTLKALKFGSVGGNESLAHLNHNGKLLSNAHLFHSLSTPTAGCFQLDPLSSWNLS 421

Query: 366 ----YSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEI 425
                 +S +L+  P ++NSVDEV GRI+LMAKDQHGCRFLQR F EGT +D+EKIF EI
Sbjct: 422 PDFTVLKSTNLRAQPPKYNSVDEVTGRIYLMAKDQHGCRFLQRTFSEGTPQDVEKIFLEI 481

Query: 426 IDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVI 485
           ID +VELM D FGNYLVQKLLEVCN++QRMQILR IT+  GELV ISCDMHGTRA+QKVI
Sbjct: 482 IDHIVELMTDPFGNYLVQKLLEVCNEDQRMQILRTITRKAGELVRISCDMHGTRAVQKVI 541

Query: 486 ETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLA 545
           ETLKT EQ  M+VSALK  IVTL+KN+NGNHVAQ CL YLMP   E LF+A   +CV+LA
Sbjct: 542 ETLKTPEQFSMVVSALKPCIVTLIKNMNGNHVAQRCLQYLMPEYSEFLFEATTANCVELA 601

Query: 546 VDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAI 605
            DRHGCCVLQKCLS S    R  L++EIT NALI+SQD +GNYVVQF+ +L L WA   I
Sbjct: 602 TDRHGCCVLQKCLSQSKGEQRRCLVSEITSNALILSQDPFGNYVVQFVFELRLPWAATDI 661

Query: 606 LKQLEGNYGDLSMQKYSSNVVEKCLQFAGG-QITKIVLELINDPRFDKIMQDPYGNYAIQ 665
           L QLEGNYGDLS+QKYSSNVVEKCL++AG  + T+I+ ELIN+ R D++MQDP+GNY IQ
Sbjct: 662 LDQLEGNYGDLSVQKYSSNVVEKCLKYAGEVRRTRIIRELINNSRLDQVMQDPFGNYVIQ 721

Query: 666 TALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 680
            AL  ++G LH  LVEAIRPHVP L+ SPYGKKVL+
Sbjct: 722 AALQQSKGALHAALVEAIRPHVPTLQTSPYGKKVLS 750

[Close]

BLAST of Cucsa.142250 vs. TrEMBL
Match: B9SBN7_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0342930 PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 1.7e-172
Identity = 340/696 (48.85%), Postives = 454/696 (65.23%), Query Frame = 1


Query: 6   SNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWKSRAIL 65
           SNG+  +  + +S  Q+S +    + +  +P DQSLT AF  L+F   S    +KS    
Sbjct: 58  SNGSPNERKLLISKNQESPIKRVQSEEANLPDDQSLTSAFTDLSFNTGSGSTNFKS---- 117

Query: 66  LENHYSDNLSKQLQNIDPSVFAAWSSSNHLTN--GVHDSHSTRLGHQNSPS-RYIPEQYK 125
                    S +  +I  S+  A S    +    G  + ++T++GH++S   ++   + K
Sbjct: 118 ---------SPKAPSISLSMTGAPSFRLPIAVPCGFDEFNATKVGHESSNLLKFNAHELK 177

Query: 126 KWQTG--QLQPFESLSPNAHLTHEV------ANVSGPNSQFPIASQRQQVLHNGRR---C 185
           +   G  Q QP E+LS    L H V      +NV+ P   FP+ S ++Q   + +    C
Sbjct: 178 QIPAGYRQPQPIENLSSALPLAHGVQGFQFLSNVAVPGIDFPLMSDQRQYFADMQSVLPC 237

Query: 186 IHPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIAGRISSQNR 245
           IH QQ N   + W   EE+Q YRMH+Q+ YLQ LHNQ+LE   P+Q + N+A ++ +++ 
Sbjct: 238 IHAQQFNQPHISWRNIEEEQFYRMHQQYLYLQQLHNQRLEAQHPMQANGNVATKLMNRHV 297

Query: 246 KPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILG 305
           +  Y+EVP++H L+Q N E  W   A  RG NQ     S + M+ +  + K SFP KIL 
Sbjct: 298 RQPYFEVPVSHQLQQPNQEQVWNDYAVTRGLNQ-----SQNGMNILDEVGKQSFPEKILT 357

Query: 306 RSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSA---- 365
           RS G++T+ A+++ S   ++S  +++Q   +  N   R      + EC   DH S+    
Sbjct: 358 RSQGLSTLKAVKYSSAGGNESLANLSQNGKVLLNGHLRHTLTPPSAECFQLDHLSSWDLS 417

Query: 366 ---MYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEI 425
              +  +S +L+  P+++NSVDEV GR++LMAKDQHGCRFLQRKF EGT +DIEKIF E+
Sbjct: 418 PDIIDLKSTNLRPQPQKYNSVDEVTGRVYLMAKDQHGCRFLQRKFSEGTPQDIEKIFLEV 477

Query: 426 IDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVI 485
           ID + ELM D FGNYLVQKLLEVCN++QRMQIL  IT+  GELV ISCDMHGTRA+QKVI
Sbjct: 478 IDHIAELMTDPFGNYLVQKLLEVCNEDQRMQILCAITRKAGELVRISCDMHGTRAVQKVI 537

Query: 486 ETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLA 545
           ETLKT +Q  M+VS+LK GIVTL+KN+NGNHVAQ CL YL P   E LF+AA  +CV+LA
Sbjct: 538 ETLKTPQQFSMVVSSLKPGIVTLIKNMNGNHVAQRCLQYLTPEHSEFLFEAATTNCVELA 597

Query: 546 VDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAI 605
            DRHGCCVLQKCLS S+   R  LI+EIT NALI+SQD +GNYVVQF+ +L L WAT  I
Sbjct: 598 TDRHGCCVLQKCLSHSEGEQRRCLISEITSNALILSQDPFGNYVVQFVFELRLPWATANI 657

Query: 606 LKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQ-ITKIVLELINDPRFDKIMQDPYGNYAIQ 665
           L QLEGNYGDLSMQKYSSNV+EKCL++A  +    I+ +LI++   D++MQDPYGNY IQ
Sbjct: 658 LDQLEGNYGDLSMQKYSSNVIEKCLKYASEEHRAHIIRQLISNTHLDQVMQDPYGNYVIQ 717

Query: 666 TALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 680
            AL+ ++G LH  LVEAIRPHVPVLR SPYGKKVL+
Sbjct: 718 AALHQSKGALHAALVEAIRPHVPVLRTSPYGKKVLS 735

[Close]

BLAST of Cucsa.142250 vs. TAIR10
Match: AT5G56510.1 (AT5G56510.1 pumilio 12)

HSP 1 Score: 411.0 bits (1055), Expect = 1.4e-114
Identity = 231/505 (45.74%), Postives = 314/505 (62.18%), Query Frame = 1


Query: 180 RQVGWNYAEEDQLYRMHEQH--PYLQHLHNQQLERLLPIQQHENIAGRISSQNRKPQYYE 239
           +QVG+       +     QH  P+ Q L + Q        + EN   R+  Q    QY  
Sbjct: 113 QQVGYLPNLSSGISPAQRQHYLPHSQPLSHYQSPMTWRDIEEENFQ-RLKLQEE--QYLS 172

Query: 240 V-PIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSP-G 299
           + P   HL+  +  P      + R      ++F  +  D  + + K+ +P KIL RS   
Sbjct: 173 INPHFLHLQSMDTVPRQDHFDYRRAEQSNRNLF-WNGEDGNESVRKMCYPEKILMRSQMD 232

Query: 300 MNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSL 359
           +NT   +++ + D  ++       R    N       +S  N                 L
Sbjct: 233 LNTAKVIKYGAGDESQNG------RLWLQNQLNEDLTMSLNN-----------------L 292

Query: 360 KLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDA 419
            L P+++NS+ E RG+I+ +AKDQHGCRFLQR F E    DIE IF EIID + ELMMD 
Sbjct: 293 SLQPQKYNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDP 352

Query: 420 FGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHM 479
           FGNYLVQKLLEVCN++QRMQI+  IT+  G L+ ISCDMHGTRA+QK++ET K +E++ +
Sbjct: 353 FGNYLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISI 412

Query: 480 IVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQK 539
           I+SALK GIV L+KN+NGNHV Q CL YL+P C + LF+AA   CV+LA DRHGCCVLQK
Sbjct: 413 IISALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQK 472

Query: 540 CLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDL 599
           CL  S+   + +L++EI  NAL++SQD +GNYV+Q++ +L L+WAT  IL+QLEGNY +L
Sbjct: 473 CLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTEL 532

Query: 600 SMQKYSSNVVEKCLQFAGGQ-ITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLH 659
           SMQK SSNVVEKCL+ A  +   +I+ ELIN  R D++M DPYGNY IQ AL  ++G +H
Sbjct: 533 SMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVH 590

Query: 660 TKLVEAIRPHVPVLRMSPYGKKVLA 680
             LV+AI+ ++  LR +PYGKKVL+
Sbjct: 593 ALLVDAIKLNISSLRTNPYGKKVLS 590

[Close]

BLAST of Cucsa.142250 vs. TAIR10
Match: AT1G22240.1 (AT1G22240.1 pumilio 8)

HSP 1 Score: 327.8 bits (839), Expect = 1.6e-89
Identity = 158/320 (49.38%), Postives = 225/320 (70.31%), Query Frame = 1


Query: 360 ERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNY 419
           E    V E +G ++ MAKDQHGCRFLQ  F +G+  D   IF E+I  VVELMMD FGNY
Sbjct: 191 ESLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNY 250

Query: 420 LVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSA 479
           L+QKLL+VCN+ QR QI+  +T   G+L+ IS + +GTR +Q+++E++KT++Q+ ++ SA
Sbjct: 251 LMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSA 310

Query: 480 LKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSC 539
           L+ G + L++++NGNHV Q CL  L     E +F+ A   C+D+A  RHGCCVLQKC++ 
Sbjct: 311 LRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAY 370

Query: 540 SDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQK 599
           S    R+ L+ EI++N+L ++QD YGNY VQF+L+L    A  A+L QL+G+Y +LSMQK
Sbjct: 371 SSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQK 430

Query: 600 YSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVE 659
           +SS++VE+CL        +IV ELI+ P FD ++QDPY N+ IQ AL  T+G+LH  LVE
Sbjct: 431 FSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHATLVE 490

Query: 660 AIRPHVPVLRMSPYGKKVLA 680
            IRPH  +LR +PY K++ +
Sbjct: 491 VIRPH-SILRNNPYCKRIFS 509

[Close]

BLAST of Cucsa.142250 vs. TAIR10
Match: AT1G78160.1 (AT1G78160.1 pumilio 7)

HSP 1 Score: 323.9 bits (829), Expect = 2.3e-88
Identity = 154/313 (49.20%), Postives = 223/313 (71.25%), Query Frame = 1


Query: 367 EVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLE 426
           +++G ++LMAKDQHGCRFLQR F EGT  D   IF E+I  VVELMMD FGNYL+QKLL+
Sbjct: 333 DIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLD 392

Query: 427 VCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVT 486
           VC + QR QI+   T+  G+L+ IS + +GTR +Q+++ET+++ +Q+ ++  AL+ G + 
Sbjct: 393 VCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLD 452

Query: 487 LMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRD 546
           L+K++NGNHV Q CL  L     + +FDAA   C ++A  RHGCCVLQKC++ S    R+
Sbjct: 453 LIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQRE 512

Query: 547 NLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVE 606
            LI EI++N+L+++QD +GNY VQF+++L +  A   +L QL+G+Y  LSMQK+SS++VE
Sbjct: 513 KLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVE 572

Query: 607 KCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVP 666
           +CL        +IV EL++ P FD+++QDPY N+ IQ AL  T+G LH  LVE IRPH  
Sbjct: 573 RCLMHCPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAATKGPLHASLVEVIRPH-S 632

Query: 667 VLRMSPYGKKVLA 680
           +LR +PY K++ +
Sbjct: 633 ILRNNPYCKRIFS 644

[Close]

BLAST of Cucsa.142250 vs. TAIR10
Match: AT4G08840.1 (AT4G08840.1 pumilio 11)

HSP 1 Score: 288.1 bits (736), Expect = 1.4e-77
Identity = 141/310 (45.48%), Postives = 214/310 (69.03%), Query Frame = 1


Query: 370 GRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCN 429
           G ++LMAKDQ GCR LQ+   EG   D+  IFKE+I+ V+EL  D FGNYL+QKL+EVCN
Sbjct: 244 GSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCN 303

Query: 430 DNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMK 489
           + QR QIL R+T   G LV IS + +GTR +QK+IET+ T+EQ+ ++ SAL  G ++L +
Sbjct: 304 EEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFR 363

Query: 490 NINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLI 549
            +NGNHV  +CL +  P+  + + +AA   C+++A  RHGCCVLQ+C+S S     + L+
Sbjct: 364 ELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLV 423

Query: 550 NEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCL 609
           +EI++N+L+++QD +GNY+VQ+I++  +      +L +L GNY  L+ QK+ S+VVEKCL
Sbjct: 424 DEISRNSLLLAQDPFGNYLVQYIIEKKVGGVN--VLFELRGNYVKLATQKFGSHVVEKCL 483

Query: 610 QFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLR 669
           ++     ++IV EL++   F  ++QDPY NY IQ AL+ T+G +   LVE +R +   L+
Sbjct: 484 RYYPESRSQIVNELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRASLVEKVRRY-ENLK 543

Query: 670 MSPYGKKVLA 680
           M+PY K++ +
Sbjct: 544 MTPYCKRIFS 550

[Close]

BLAST of Cucsa.142250 vs. TAIR10
Match: AT1G35730.1 (AT1G35730.1 pumilio 9)

HSP 1 Score: 275.8 bits (704), Expect = 7.3e-74
Identity = 146/327 (44.65%), Postives = 214/327 (65.44%), Query Frame = 1


Query: 356 KLVPERFN---SVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELM 415
           K+ P+  N   S+ E+ G + LMAKDQ GCR LQ+   EGT  + + I   IID VVEL 
Sbjct: 235 KMSPKSNNDLVSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELS 294

Query: 416 MDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQ 475
           MD FGNY+VQKL +V ++ QR  I+  +T N  EL+ I  + +GTR +QK+IET+KT++Q
Sbjct: 295 MDPFGNYIVQKLFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQ 354

Query: 476 VHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCV 535
           + ++ S LK G + L+K++NGNHV Q CL  L P+  E + +AA   C ++A+ RHGCCV
Sbjct: 355 IALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCV 414

Query: 536 LQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNY 595
           LQ C+S S    R+ L+ EI++N+L +SQD +GNYVVQ+++   +  +   +L Q   +Y
Sbjct: 415 LQCCISNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQV--SAVKLLVQFRMHY 474

Query: 596 GDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGT 655
            +L+ QK+SS+V+EKCL+       +IV EL+  P F+ ++QDPY NY IQTAL+ T+G 
Sbjct: 475 AELATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQDPYANYVIQTALSVTKGP 534

Query: 656 LHTKLVEAIRPHVPVLRMSPYGKKVLA 680
           +  KLV  +  +   L  SPY KK+ +
Sbjct: 535 VRAKLVAKVYRY-GKLHSSPYCKKIFS 558

[Close]

BLAST of Cucsa.142250 vs. NCBI nr
Match: gi|659100267|ref|XP_008451010.1| (PREDICTED: pumilio homolog 12-like [Cucumis melo])

HSP 1 Score: 1307.7 bits (3383), Expect = 0.0e+00
Identity = 645/686 (94.02%), Postives = 660/686 (96.21%), Query Frame = 1


Query: 1   MRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWK 60
           MRD+HSNG+LMDGNISMSTLQQSSMDHTSTRQN V GDQSLTRAFEKLNFGDESK RAW+
Sbjct: 29  MRDFHSNGHLMDGNISMSTLQQSSMDHTSTRQNSVSGDQSLTRAFEKLNFGDESKGRAWR 88

Query: 61  SRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHDSHSTRLGHQNSPSRYIPEQ 120
           SRA L E+HYSDNLSKQLQNIDPSVFAAWS S+HLTNGVHD HSTRLGHQN PSRYIPEQ
Sbjct: 89  SRAFLFEDHYSDNLSKQLQNIDPSVFAAWSPSSHLTNGVHDPHSTRLGHQNPPSRYIPEQ 148

Query: 121 YKKWQTGQLQPFESLSPNAHLTHEVANVSGPNSQFPIASQRQQVLHNGRRCIHPQQMNHR 180
           YKKWQ GQLQPFESLSPNAHLT EV NVS PNSQFPIASQRQQVLHNGRR IHPQQMNHR
Sbjct: 149 YKKWQLGQLQPFESLSPNAHLTQEVVNVSAPNSQFPIASQRQQVLHNGRR-IHPQQMNHR 208

Query: 181 QVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIAGRISSQNRKPQYYEVPI 240
           Q GWNYAEEDQL+RMHEQHPYLQHLHNQQLERLLPIQQHENIA RISSQNRKPQY+EVPI
Sbjct: 209 QAGWNYAEEDQLFRMHEQHPYLQHLHNQQLERLLPIQQHENIANRISSQNRKPQYFEVPI 268

Query: 241 AHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVD 300
           AHHLEQSN+EP+WK SAF RGSNQLNSVFSTHYMDT+QGMEKVSFPRKILGRSPG+NTVD
Sbjct: 269 AHHLEQSNYEPSWKASAFRRGSNQLNSVFSTHYMDTIQGMEKVSFPRKILGRSPGLNTVD 328

Query: 301 AMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPE 360
           AMRFMS+D DKSSNHVNQ RFLRPNS FRPN+LSTANECMCRDHS AMYSESPSLKLVPE
Sbjct: 329 AMRFMSIDGDKSSNHVNQSRFLRPNSCFRPNHLSTANECMCRDHSPAMYSESPSLKLVPE 388

Query: 361 RFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYL 420
           RFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIF EIID VV+LM+DAFGNYL
Sbjct: 389 RFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFNEIIDHVVDLMVDAFGNYL 448

Query: 421 VQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSAL 480
           VQKLLEVCNDNQRMQIL RITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSAL
Sbjct: 449 VQKLLEVCNDNQRMQILCRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSAL 508

Query: 481 KSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCS 540
           KSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCS
Sbjct: 509 KSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCS 568

Query: 541 DSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKY 600
           DSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKY
Sbjct: 569 DSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKY 628

Query: 601 SSNVVEKCLQFAGG-QITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVE 660
           SSNVVEKCLQFA G QITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVE
Sbjct: 629 SSNVVEKCLQFADGVQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVE 688

Query: 661 AIRPHVPVLRMSPYGKKVLAIVGKSN 686
           AIRPHVPVLRMSPYGKKVLAIVGKSN
Sbjct: 689 AIRPHVPVLRMSPYGKKVLAIVGKSN 713

[Close]

BLAST of Cucsa.142250 vs. NCBI nr
Match: gi|778663304|ref|XP_004144136.2| (PREDICTED: pumilio homolog 12-like [Cucumis sativus])

HSP 1 Score: 1209.9 bits (3129), Expect = 0.0e+00
Identity = 612/685 (89.34%), Postives = 618/685 (90.22%), Query Frame = 1


Query: 1   MRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWK 60
           MRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWK
Sbjct: 28  MRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWK 87

Query: 61  SRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHDSHSTRLGHQNSPSRYIPEQ 120
           SRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHDSHSTRLGHQNSPSRYIPEQ
Sbjct: 88  SRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHDSHSTRLGHQNSPSRYIPEQ 147

Query: 121 YKKWQTGQLQPFESLSPNAHLTHEVANVSGPNSQFPIASQRQQVLHNGRRCIHPQQMNHR 180
           YKKWQ                       +G    F   S    + H       P      
Sbjct: 148 YKKWQ-----------------------TGQLQPFESLSPNAHLTHEVANVSGPNSQ--- 207

Query: 181 QVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIAGRISSQNRKPQYYEVPI 240
              +  A +    R    H   + +H QQLERLLPIQQHENIAGRISSQNRKPQYYEVPI
Sbjct: 208 ---FPIASQ----RQQVLHNGRRCIHPQQLERLLPIQQHENIAGRISSQNRKPQYYEVPI 267

Query: 241 AHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVD 300
           AHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVD
Sbjct: 268 AHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKVSFPRKILGRSPGMNTVD 327

Query: 301 AMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPE 360
           AMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPE
Sbjct: 328 AMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSLKLVPE 387

Query: 361 RFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYL 420
           RFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYL
Sbjct: 388 RFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYL 447

Query: 421 VQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSAL 480
           VQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSAL
Sbjct: 448 VQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSAL 507

Query: 481 KSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCS 540
           KSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCS
Sbjct: 508 KSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCS 567

Query: 541 DSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKY 600
           DSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKY
Sbjct: 568 DSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKY 627

Query: 601 SSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEA 660
           SSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEA
Sbjct: 628 SSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEA 679

Query: 661 IRPHVPVLRMSPYGKKVLAIVGKSN 686
           IRPHVPVLRMSPYGKKVLAIVGKSN
Sbjct: 688 IRPHVPVLRMSPYGKKVLAIVGKSN 679

[Close]

BLAST of Cucsa.142250 vs. NCBI nr
Match: gi|694422736|ref|XP_009339193.1| (PREDICTED: pumilio homolog 12-like [Pyrus x bretschneideri])

HSP 1 Score: 628.6 bits (1620), Expect = 1.3e-176
Identity = 350/718 (48.75%), Postives = 461/718 (64.21%), Query Frame = 1


Query: 5   HSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWK--SR 64
           H+NG L +G  S   +Q+S +         +P DQSLT A   L+F     + A      
Sbjct: 57  HNNGRLDEGKNSAKKIQKSPVKRVQREVTNLPDDQSLTSALAGLSFNGAVNMEAGSHVKN 116

Query: 65  AILLENHYS------DNLSKQLQNIDPSVFA--AWSSSNHLTNGVHDSHSTRLGHQNSP- 124
              L+N++S      ++L  Q+ ++D  V    ++ + N +  G ++   T  G ++S  
Sbjct: 117 CKSLQNYFSMDGQIPNSLKMQVSSMDTPVMVVPSFQAPNKIPCGFYEFDVTNSGQESSNM 176

Query: 125 SRYIPEQYKKWQTGQLQPFESLSPNAHLTHEV------ANVSGPNSQFPIASQRQQVLHN 184
           S++  E+ KK Q    QP E+LSP   L H V      +NV  P  QFP+ S  QQ    
Sbjct: 177 SKFNSEELKKPQAAYSQPIENLSPGVPLAHAVEGFQFLSNVPAPGLQFPLTSDHQQQFFL 236

Query: 185 GRRC----IHPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIA 244
             +     +H QQ+N  Q+ W   EE+Q +RM +Q+ YLQ LH+Q+LE    +Q + NIA
Sbjct: 237 DAQSNIPYLHSQQLNQNQISWRNMEEEQYHRMQQQYVYLQQLHDQRLEAQHLVQGNGNIA 296

Query: 245 GRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKV 304
            R++  N +  ++EVPI+H LEQSN E  W      RG ++ N   S    + VQ ++KV
Sbjct: 297 SRLTRPNPRHPHFEVPISHRLEQSNQERIWNNYVVPRGPHESNPALSYTDFNGVQFLDKV 356

Query: 305 ---SFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECM 364
              SFP+KIL RS GMNT+ A+RF S+  D+S  H++Q   +  N  FR + LST N   
Sbjct: 357 GKQSFPKKILTRSQGMNTLKAVRFGSVGTDESLTHISQNGKVVSNGHFR-HALSTRNTGC 416

Query: 365 CRDHSSAMYSESPSL------------------KLVPERFNSVDEVRGRIFLMAKDQHGC 424
            +  S   +   PSL                  K +P+++NS+DE+ GRI+LMAKDQHGC
Sbjct: 417 FQLDSLNTWGMFPSLMHLKNTDMKVLPQKYTDLKTLPQKYNSMDEITGRIYLMAKDQHGC 476

Query: 425 RFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQ 484
           RFLQRKF EGT +D+E IF EIID +VELM D FGNYL+QKLLEVC+++Q+MQIL  IT+
Sbjct: 477 RFLQRKFSEGTPKDVENIFFEIIDHIVELMTDPFGNYLIQKLLEVCDEDQQMQILHSITK 536

Query: 485 NHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLD 544
             GELV ISCDMHGTRA+QKVIETLKT EQ  M+VS+LK GIV L+KN NGNHVAQ CL 
Sbjct: 537 KPGELVRISCDMHGTRAVQKVIETLKTPEQFSMVVSSLKPGIVMLIKNTNGNHVAQRCLQ 596

Query: 545 YLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQD 604
           YL    RE LF AA  +CV+LA DRHGCCVLQKCLS SD+  R+ LI EIT NALI+SQD
Sbjct: 597 YLTREYREFLFVAATTNCVELATDRHGCCVLQKCLSHSDAEQRNRLICEITSNALILSQD 656

Query: 605 QYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFA-GGQITKIVL 664
            +GNYVVQF+ +L L WAT  IL QLEGNYGDLS+QKYSSNVVEK L++A   +  +I+ 
Sbjct: 657 PFGNYVVQFVFELQLPWATLDILDQLEGNYGDLSVQKYSSNVVEKSLKYACEERRIRIIQ 716

Query: 665 ELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 680
           ELI +PR D++MQDPYGNY +Q AL+ ++G LH+KLV+AI+PH+PVLR SPYGKK+L+
Sbjct: 717 ELIENPRLDQVMQDPYGNYVVQAALSQSKGILHSKLVDAIKPHMPVLRTSPYGKKILS 773

[Close]

BLAST of Cucsa.142250 vs. NCBI nr
Match: gi|595840720|ref|XP_007208073.1| (hypothetical protein PRUPE_ppa001655mg [Prunus persica])

HSP 1 Score: 622.1 bits (1603), Expect = 1.2e-174
Identity = 348/718 (48.47%), Postives = 458/718 (63.79%), Query Frame = 1


Query: 5   HSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNF---------GDESK 64
           H+NG   +G  S+  +Q+S +         +P D+SLT AF  L+F           E  
Sbjct: 61  HTNGRRNEGKNSVKKIQKSPVARGQPEVANLPDDRSLTSAFAGLSFDGGVTVEAGSHEET 120

Query: 65  VRAWKSRAILLENHYSDNLSKQLQNIDPSVFA--AWSSSNHLTNGVHDSHSTRLGHQNSP 124
            ++ ++ +  L     ++L   + + D  V    ++ + N+   G ++   T +G ++S 
Sbjct: 121 CKSMQNFSFSLNGQIPNSLKTHISDSDAPVMVVPSFQAPNNTPCGFYEFDVTNIGQESSN 180

Query: 125 -SRYIPEQYKKWQTGQLQPFESLSPNAHLTHEV------ANVSGPNSQFPIASQRQQVLH 184
            S++  E+ KK Q    QP E+LS    L H V      +NV GP  QFP+ S  QQ   
Sbjct: 181 MSKFNSEELKKPQVVYSQPMETLSSAVPLAHAVQGFQFLSNVPGPGLQFPLTSDPQQFFL 240

Query: 185 NGRRCI---HPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIA 244
           + +  I     QQ+N  QV W   EE+Q YRM +++ Y+Q LH+Q+LE    +Q   NIA
Sbjct: 241 DAQSRIPYLRSQQLNQNQVSWRNMEEEQYYRMQQRYVYMQQLHDQRLEAQHLVQGSGNIA 300

Query: 245 GRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKV 304
            R++  N +  ++EVPI+H LEQSN E         RG +Q N   S   ++ +Q  +KV
Sbjct: 301 SRLTCPNPRHPHFEVPISHRLEQSNQERVRNNYVIPRGPHQSNPALSYTDLNGIQVFDKV 360

Query: 305 ---SFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECM 364
              SFP KIL RS GMNT+ A++F ++ AD+S  HV+    +  N  FR +  ST N   
Sbjct: 361 GKQSFPEKILTRSHGMNTLKAVKFGAVGADESLAHVSHNGKVLSNGHFR-HTFSTQNTGC 420

Query: 365 CRDHSSAMYSESPSL------------------KLVPERFNSVDEVRGRIFLMAKDQHGC 424
            +  S + +   PSL                  K +P+++NS+DE+ GRI+LMAKDQHGC
Sbjct: 421 FQLDSLSTWGMFPSLMHLKNTDMKALPQKYTDMKALPQKYNSMDEITGRIYLMAKDQHGC 480

Query: 425 RFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQ 484
           RFLQRKF EG  +D+E IF EIID +VELM D FGNYL+QKLLEVC + Q+MQIL  IT+
Sbjct: 481 RFLQRKFSEGAQKDVENIFFEIIDHIVELMTDPFGNYLIQKLLEVCGEVQKMQILHSITK 540

Query: 485 NHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLD 544
             GELV ISCDMHGTRA+QKVIETLKT EQ  M+VS+LK GIVTL+KN NGNHVAQ CL 
Sbjct: 541 KPGELVRISCDMHGTRAVQKVIETLKTLEQFSMVVSSLKPGIVTLIKNTNGNHVAQRCLQ 600

Query: 545 YLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQD 604
           YL P  RE LF+AA  +CV+LA DRHGCCVLQKCLS SD+  R+ LI EIT NALI+SQD
Sbjct: 601 YLTPEYREFLFEAATTNCVELATDRHGCCVLQKCLSHSDAEQRNRLICEITSNALILSQD 660

Query: 605 QYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQ-ITKIVL 664
            +GNYVVQF+ +L L WAT  IL QLEGNYGDLS+QKYSSNVVEK L++AG +   +IV 
Sbjct: 661 PFGNYVVQFVFELQLPWATVDILDQLEGNYGDLSVQKYSSNVVEKSLKYAGEERRVRIVQ 720

Query: 665 ELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 680
           ELI +PR D+IMQDPYGNY IQ AL+ ++GT H+KL++AI+PHVPVLR SPYGKK+L+
Sbjct: 721 ELIENPRLDQIMQDPYGNYVIQAALSQSKGTFHSKLMDAIKPHVPVLRTSPYGKKILS 777

[Close]

BLAST of Cucsa.142250 vs. NCBI nr
Match: gi|645215196|ref|XP_008221961.1| (PREDICTED: pumilio homolog 12 [Prunus mume])

HSP 1 Score: 619.8 bits (1597), Expect = 5.8e-174
Identity = 348/718 (48.47%), Postives = 457/718 (63.65%), Query Frame = 1


Query: 5   HSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGD---------ESK 64
           H+NG   +G  S+  + +S  +        +P D+SLT AF  L+F           E  
Sbjct: 61  HNNGRRNEGKNSVKKILKSPAERGQPEVTNLPDDRSLTSAFAGLSFDGGVTMEAGSYEET 120

Query: 65  VRAWKSRAILLENHYSDNLSKQLQNIDPSVFA--AWSSSNHLTNGVHDSHSTRLGHQNSP 124
            ++ ++ +  L     ++L   + + D  V    ++ + N+   G ++   T +G ++S 
Sbjct: 121 CKSMQNLSFSLNGQIPNSLKTHISDSDTPVMVVPSFQAPNNTPCGFYEFDVTNIGQESSN 180

Query: 125 -SRYIPEQYKKWQTGQLQPFESLSPNAHLTHEV------ANVSGPNSQFPIASQRQQVLH 184
            S++  E+ KK Q    QP E+LS    L H V      +NV GP  QFP+ S  QQ   
Sbjct: 181 MSKFNSEELKKPQVVYSQPMENLSSAVPLAHTVQGFQFLSNVPGPGLQFPLTSDPQQFFL 240

Query: 185 NGRRCI---HPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIA 244
           + +  I     QQ+N  QV W   EE+Q YRM +++ Y+Q LH+Q+ E    +Q   NIA
Sbjct: 241 DAQSRIPYLRSQQLNQNQVSWRNMEEEQYYRMQQRYVYMQQLHDQRFEAQHLVQGSGNIA 300

Query: 245 GRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGMEKV 304
            R++  N +  ++EVPI+H LEQSN E         RG +Q N   S    + +Q  +KV
Sbjct: 301 SRLTCPNPRHTHFEVPISHRLEQSNQERVRNNYVIPRGPHQSNPALSYTDFNGIQVFDKV 360

Query: 305 ---SFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECM 364
              SFP KIL RS GMNT+ A++F ++ AD+S  HV+  + L  N  FR + LST N   
Sbjct: 361 GKQSFPEKILTRSHGMNTLKAVKFGAVGADESLAHVHNGKVLS-NGHFR-HTLSTQNTGC 420

Query: 365 CRDHSSAMYSESPSL------------------KLVPERFNSVDEVRGRIFLMAKDQHGC 424
            +  S + +   PSL                  K +P+++NS+DE+ GRI+LMAKDQHGC
Sbjct: 421 FQLDSLSTWGMFPSLMHLKNTDMKALPQKYTDMKALPQKYNSMDEITGRIYLMAKDQHGC 480

Query: 425 RFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQ 484
           RFLQRKF EG  +D+E IF EIID +VELM D FGNYL+QKLLEVC + Q+MQIL  IT+
Sbjct: 481 RFLQRKFSEGAQKDVENIFFEIIDHIVELMTDPFGNYLIQKLLEVCGEVQKMQILHSITK 540

Query: 485 NHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLD 544
             GELV ISCDMHGTRA+QKVIETLKT EQ  M+VS+LK GIVTL+KN NGNHVAQ CL 
Sbjct: 541 KPGELVRISCDMHGTRAVQKVIETLKTPEQFSMVVSSLKPGIVTLIKNTNGNHVAQRCLQ 600

Query: 545 YLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQD 604
           YL P  RE LF+AA  +CV+LA DRHGCCVLQKCLS SD+  R+ LI EIT NALI+SQD
Sbjct: 601 YLTPEYREFLFEAATTNCVELATDRHGCCVLQKCLSHSDAEQRNRLICEITSNALILSQD 660

Query: 605 QYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQ-ITKIVL 664
            +GNYVVQF+ +L L WAT  IL QLEGNYGDLS+QKYSSNVVEK L++AG +   +IV 
Sbjct: 661 PFGNYVVQFVFELQLPWATVDILDQLEGNYGDLSVQKYSSNVVEKSLKYAGEERRIRIVQ 720

Query: 665 ELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 680
           ELI +PR D+IMQDPYGNY IQ AL+ ++GT H+KL++AI+PHVPVLR SPYGKK+L+
Sbjct: 721 ELIENPRLDQIMQDPYGNYVIQAALSQSKGTFHSKLMDAIKPHVPVLRTSPYGKKILS 776

The following BLAST results are available for this feature:

BLAST of Cucsa.142250 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUM12_ARATH	2.6e-113	45.74	Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2	[more]
PUM8_ARATH	2.9e-88	49.38	Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana GN=APUM8 PE=3 ...	[more]
PUM7_ARATH	4.1e-87	49.20	Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana GN=APUM7 PE=3 ...	[more]
PUM11_ARATH	2.5e-76	45.48	Pumilio homolog 11 OS=Arabidopsis thaliana GN=APUM11 PE=3 SV=2	[more]
PUM9_ARATH	1.3e-72	44.65	Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1	[more]

BLAST of Cucsa.142250 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX44_CUCSA	0.0e+00	89.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599470 PE=4 SV=1	[more]
M5W697_PRUPE	8.2e-175	48.47	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001655mg PE=4 SV=1	[more]
M5WJ63_PRUPE	1.5e-173	48.40	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001655mg PE=4 SV=1	[more]
U5GNJ8_POPTR	2.6e-173	49.43	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s03990g PE=4 SV=1	[more]
B9SBN7_RICCO	1.7e-172	48.85	RNA binding protein, putative OS=Ricinus communis GN=RCOM_0342930 PE=4 SV=1	[more]

BLAST of Cucsa.142250 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G56510.1	1.4e-114	45.74	pumilio 12	[more]
AT1G22240.1	1.6e-89	49.38	pumilio 8	[more]
AT1G78160.1	2.3e-88	49.20	pumilio 7	[more]
AT4G08840.1	1.4e-77	45.48	pumilio 11	[more]
AT1G35730.1	7.3e-74	44.65	pumilio 9	[more]

BLAST of Cucsa.142250 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100267\|ref\|XP_008451010.1\|	0.0e+00	94.02	PREDICTED: pumilio homolog 12-like [Cucumis melo]	[more]
gi\|778663304\|ref\|XP_004144136.2\|	0.0e+00	89.34	PREDICTED: pumilio homolog 12-like [Cucumis sativus]	[more]
gi\|694422736\|ref\|XP_009339193.1\|	1.3e-176	48.75	PREDICTED: pumilio homolog 12-like [Pyrus x bretschneideri]	[more]
gi\|595840720\|ref\|XP_007208073.1\|	1.2e-174	48.47	hypothetical protein PRUPE_ppa001655mg [Prunus persica]	[more]
gi\|645215196\|ref\|XP_008221961.1\|	5.8e-174	48.47	PREDICTED: pumilio homolog 12 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001313	Pumilio_RNA-bd_rpt
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0005488	binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.142250.1	Cucsa.142250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001313	Pumilio RNA-binding repeat	PFAM	PF00806	PUF	coord: 554..574 score: 6.7E-4coord: 518..549 score: 3.4E-7coord: 626..647 score: 4.3E-4coord: 403..437 score: 2.6E-8coord: 445..476 score: 2.
IPR001313	Pumilio RNA-binding repeat	SMART	SM00025	pum_5	coord: 479..514 score: 0.0025coord: 367..402 score: 1.0E-4coord: 515..550 score: 5.8E-6coord: 442..478 score: 0.0066coord: 551..586 score: 0.42coord: 587..621 score: 1.4coord: 403..438 score: 9.7E-9coord: 624..659 score:
IPR001313	Pumilio RNA-binding repeat	PROFILE	PS50302	PUM	coord: 367..402 score: 8.711coord: 622..659 score: 8.594coord: 479..502 score: 5.421coord: 551..586 score: 9.061coord: 439..478 score: 9.364coord: 403..438 score: 12.49coord: 587..610 score: 5.934coord: 510..550 score:
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 365..683 score: 5.0E
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 364..682 score: 6.91E
None	No IPR available	PANTHER	PTHR12537	RNA BINDING PROTEIN PUMILIO-RELATED	coord: 1..21 score: 8.3E-177coord: 334..681 score: 8.3E
None	No IPR available	PANTHER	PTHR12537:SF13	SUPPRESSOR PROTEIN MPT5	coord: 334..681 score: 8.3E-177coord: 1..21 score: 8.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.142250	Cp4.1LG18g02710	Cucurbita pepo (Zucchini)	cgycpeB0383

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.142250	Wax gourd	cgywgoB282
Cucsa.142250	Cucurbita maxima (Rimu)	cgycmaB0396
Cucsa.142250	Cucurbita moschata (Rifu)	cgycmoB0396
Cucsa.142250	Wild cucumber (PI 183967)	cgycpiB208
Cucsa.142250	Cucumber (Chinese Long) v2	cgycuB205
Cucsa.142250	Melon (DHL92) v3.5.1	cgymeB238
Cucsa.142250	Watermelon (Charleston Gray)	cgywcgB242
Cucsa.142250	Watermelon (97103) v1	cgywmB251
Cucsa.142250	Cucurbita pepo (Zucchini)	cgycpeB0385
Cucsa.142250	Bottle gourd (USVL1VR-Ls)	cgylsiB230
Cucsa.142250	Melon (DHL92) v3.6.1	cgymedB235
Cucsa.142250	Silver-seed gourd	carcgyB0574
Cucsa.142250	Cucumber (Chinese Long) v3	cgycucB213
Cucsa.142250	Watermelon (97103) v2	cgywmbB241