Cucsa.142120 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGGAATTCCGTTGCAGTTTGGGGGAATCAAAGGTGAAGACTGGTTTTATATTCCGGTAAGGGGCAAAGAATTATAATCACCAAAACCCGTCAAGGAATCCTACCAAGACCGATGAAATCGAGAGCCCATTGAGTAAAGTTGATTCTTGGAACACACAAGGCCTTCAGTTCCAGCACAGTACTTCTTTGAGGTCAATGCTTAGAATCAAAGAAAGTTGATTACGTACAACCTTGAATGGTTCCGTTTCTTGTGGCCCTTTAATGGTCTGCATGGCCTTTTCTGCATCTACAAGTCTTTGACCTCTAAGTAAATAATCCCGTCTGAGAGTTATTTGTTTCTGTTTTTCTTGGGAAATCTTAATTTTTGACGATGATATTTTCTTTGTTTCCAGAGAACTATGAGGGATAGGAGGACTTGTGATATCGAGTTTCAACTTTATTTCATTCTGCATGATCTGTGGGAATCTTTCAAGGAGTGGAGTGCATATGGCGCTGGAGTTCCTTTGGTACTCATGAAGGTGACTGTTGTGTTCAATATTACGTTCCATATTTGTCTGGTATCCAAATATATGGGGAAGCTGCTACATTGACATCAGATTCTCACGCCATGCAGGTACTTGACCTTCGAGTGGAATATGTTAACCCTCATGAGTATGAATTCTTTTTGTATGTGGATTTCTGTGCGTGATTTCCAGGTTGAGTGGAATATATATGTGTTTAATGAACTGTGAGTGTGAGAGTCATTTTACCAAGACTTATCTTCTACTCTACTGTGGGTTTCTTTTTAGATGTGATGATCAAGAACTTTTCCTACCATTCTTAACGTACGAGAACATTGGTTTTCCCCAGAAGTTGGCTCATTCTTTGTTTCTTTTTATTTGGTAGGCTGACTTGTGAGCACAGTGATGGAAGCATTGACTATGATTTAGGAAAAATCTTTTACATTAATCCATTAAAGACGTTTTCCAGCATGTTTCCACAAGTTAAATGGTTGATGATCCCACTGTTCTCTAGAAAAGTAAAACTTTTTTCCTAAATCGTAGCCAATGCTTCCATCGCTGGTTGTATCTCTACAAGAATCAAGATCACTATCATCGCTGGTTCACATATATTCTAGTTGGACAAACATAA ATGTTGGGAATTCCGTTGCAGTTTGGGGGAATCAAAGGTGAAGACTGGTTTTATATTCCGAGAACTATGAGGGATAGGAGGACTTGTGATATCGAGTTTCAACTTTATTTCATTCTGCATGATCTGTGGGAATCTTTCAAGGAGTGGAGTGCATATGGCGCTGGAGTTCCTTTGGTACTCATGAAGATTCTCACGCCATGCAGGTACTTGACCTTCGAGTGGAATATGCTGACTTGTGAGCACAGTGATGGAAGCATTGACTATGATTTAGGAAAAATCTTTTACATTAATCCATTAAAGACCCAATGCTTCCATCGCTGGTTGTATCTCTACAAGAATCAAGATCACTATCATCGCTGGTTCACATATattctagttggacaaacataa ATGTTGGGAATTCCGTTGCAGTTTGGGGGAATCAAAGGTGAAGACTGGTTTTATATTCCGAGAACTATGAGGGATAGGAGGACTTGTGATATCGAGTTTCAACTTTATTTCATTCTGCATGATCTGTGGGAATCTTTCAAGGAGTGGAGTGCATATGGCGCTGGAGTTCCTTTGGTACTCATGAAGATTCTCACGCCATGCAGGTACTTGACCTTCGAGTGGAATATGCTGACTTGTGAGCACAGTGATGGAAGCATTGACTATGATTTAGGAAAAATCTTTTACATTAATCCATTAAAGACCCAATGCTTCCATCGCTGGTTGTATCTCTACAAGAATCAAGATCACTATCATCGCTGGTTCACATATATTCTAGTTGGACAAACATAA MLGIPLQFGGIKGEDWFYIPRTMRDRRTCDIEFQLYFILHDLWESFKEWSAYGAGVPLVLMKILTPCRYLTFEWNMLTCEHSDGSIDYDLGKIFYINPLKTQCFHRWLYLYKNQDHYHRWFTYILVGQT*
BLAST of Cucsa.142120 vs. TrEMBL
Match: A0A0A0LS49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024240 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.2e-14 Identity = 52/105 (49.52%), Postives = 61/105 (58.10%), Query Frame = 1
BLAST of Cucsa.142120 vs. TrEMBL
Match: A0A0A0LS49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024240 PE=4 SV=1) HSP 1 Score: 37.7 bits (86), Expect = 1.2e+01 Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 1
HSP 2 Score: 78.2 bits (191), Expect = 8.3e-12 Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 1
BLAST of Cucsa.142120 vs. TrEMBL
Match: A0A061FUA9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_012430 PE=4 SV=1) HSP 1 Score: 30.8 bits (68), Expect = 1.5e+03 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1
HSP 2 Score: 78.2 bits (191), Expect = 8.3e-12 Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 1
BLAST of Cucsa.142120 vs. TrEMBL
Match: A0A061FV18_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_012430 PE=4 SV=1) HSP 1 Score: 30.8 bits (68), Expect = 1.5e+03 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1
HSP 2 Score: 75.9 bits (185), Expect = 4.1e-11 Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 1
BLAST of Cucsa.142120 vs. TrEMBL
Match: A5BKM4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027947 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.1e-11 Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 1
BLAST of Cucsa.142120 vs. TAIR10
Match: AT4G16100.1 (AT4G16100.1 Protein of unknown function (DUF789)) HSP 1 Score: 55.1 bits (131), Expect = 3.8e-08 Identity = 24/43 (55.81%), Postives = 34/43 (79.07%), Query Frame = 1
BLAST of Cucsa.142120 vs. TAIR10
Match: AT5G49220.1 (AT5G49220.1 Protein of unknown function (DUF789)) HSP 1 Score: 53.9 bits (128), Expect = 8.5e-08 Identity = 31/84 (36.90%), Postives = 44/84 (52.38%), Query Frame = 1
BLAST of Cucsa.142120 vs. TAIR10
Match: AT1G15030.1 (AT1G15030.1 Protein of unknown function (DUF789)) HSP 1 Score: 53.5 bits (127), Expect = 1.1e-07 Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 1
BLAST of Cucsa.142120 vs. TAIR10
Match: AT2G01260.1 (AT2G01260.1 Protein of unknown function (DUF789)) HSP 1 Score: 50.8 bits (120), Expect = 7.2e-07 Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 1
BLAST of Cucsa.142120 vs. NCBI nr
Match: gi|659106756|ref|XP_008453428.1| (PREDICTED: uncharacterized protein LOC103494138 isoform X3 [Cucumis melo]) HSP 1 Score: 89.7 bits (221), Expect = 4.0e-15 Identity = 54/108 (50.00%), Postives = 63/108 (58.33%), Query Frame = 1
BLAST of Cucsa.142120 vs. NCBI nr
Match: gi|659106756|ref|XP_008453428.1| (PREDICTED: uncharacterized protein LOC103494138 isoform X3 [Cucumis melo]) HSP 1 Score: 38.1 bits (87), Expect = 1.4e+01 Identity = 17/20 (85.00%), Postives = 17/20 (85.00%), Query Frame = 1
HSP 2 Score: 89.7 bits (221), Expect = 4.0e-15 Identity = 54/108 (50.00%), Postives = 63/108 (58.33%), Query Frame = 1
BLAST of Cucsa.142120 vs. NCBI nr
Match: gi|659106754|ref|XP_008453427.1| (PREDICTED: uncharacterized protein LOC103494138 isoform X2 [Cucumis melo]) HSP 1 Score: 38.1 bits (87), Expect = 1.4e+01 Identity = 17/20 (85.00%), Postives = 17/20 (85.00%), Query Frame = 1
HSP 2 Score: 89.7 bits (221), Expect = 4.0e-15 Identity = 54/108 (50.00%), Postives = 63/108 (58.33%), Query Frame = 1
BLAST of Cucsa.142120 vs. NCBI nr
Match: gi|659106752|ref|XP_008453426.1| (PREDICTED: uncharacterized protein LOC103494138 isoform X1 [Cucumis melo]) HSP 1 Score: 38.1 bits (87), Expect = 1.4e+01 Identity = 17/20 (85.00%), Postives = 17/20 (85.00%), Query Frame = 1
HSP 2 Score: 89.7 bits (221), Expect = 4.0e-15 Identity = 54/108 (50.00%), Postives = 63/108 (58.33%), Query Frame = 1
BLAST of Cucsa.142120 vs. NCBI nr
Match: gi|659106758|ref|XP_008453429.1| (PREDICTED: uncharacterized protein LOC103494138 isoform X4 [Cucumis melo]) HSP 1 Score: 38.1 bits (87), Expect = 1.4e+01 Identity = 17/20 (85.00%), Postives = 17/20 (85.00%), Query Frame = 1
HSP 2 Score: 85.5 bits (210), Expect = 7.5e-14 Identity = 52/105 (49.52%), Postives = 61/105 (58.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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