Cucsa.140490 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.140490
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	scaffold01071 : 461986 .. 464959 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGTTATGAAATCCACCTTGAGGGGGATCGTGCTATGAATATTTCGGCAACTCCTGTCATTGACTCCGCTGATTATAGTGCGAGGTCCTCTACATGTGGAAATGAGAACAATGGAAAAATAATTCTTGTCTATGATCATTGCAAGAAACAATGGCATATTAAGGAGCATTGTTATAAGTTACATGGTTGTCCCCCAGGAGATAAGAAACGCTCTTCCAACGAGAAACAGAACACATGGTGGGCATATGTGAATGCTAAACCTTCTCAATCACCTGATTCACATGGAAACCAGACCAATCCTAGTGCCACTACTTCAGGTGCCATTGTCCAATCAAGTATACCTCAGTGCTTTGGTCTTATTAGCGTAGATGGGAAGAACTCTTGGACTCTGGATTCTAGTGCTACAAATTGTTTTATTGGTTCCTTTGAACATTTTGTGTTCTATATTCCATGTGCTTGTAACAAAACAATCAGAATTGCAGATGACTTCTTGGCCCTCCCATTGCTGGGTAAGGGAAGATCTTTCTCTATGTAGGGTTCTCGTTACATAATATTTTGCATGTGTCCAAAATTTCTTATAATCTACTATCTATAAGCAAGATTACTCATGAGTTAAATTGCAAAGCAACATTTTTACCTGATTATGTTTATTTTCAAGACTTGAGCTTAGGGAGGATGATTAGCACTGCTCGACATAGTAAGGGACTCTACCTCCTTGATGACGACACCTCTTACTATAGCATTATAGGACTTTTCTTTTATATTCCTAATTTACTACTTCTGAACAAGATGCTATGTTGCATTTTCGTTTAGGCCACCCAAATTTTCAATATATGGAACATTTATTTCCTCATCTTTTCTCTAAAATTGATGTATCTATCTTAGCTTGTGACATATGTATTTGGGCTAAACAACATGAGGTTTCTTTTCCTTCACAACCATATAAACCAATCCACCCTTTCGCACTAGTTCATGGTAATGTCTGGGGACCTACCGCATTTGGGAAACAGTGGTTTGTAATCTTTATTGATATACTCGTCTTACTTGGGTCTGTCTCGTCTCTAAAAAAATCTATGGTCACTTATGTCTTTCAAGAATTCTATCAGACCGTAGAAATGCAGTTTAATGCAAAAATTGTTATTCTATGGAGTGACAATGGACATGTGTTCCAAAATCACACCCTCAATGAGTTTTTGTTCTCCAAAGGGATTGTTCAACAAAGTTCCTATGCCTACACCTTGAACAAAATGGGGTAGTCGAGCATGAAAATCAACATCTTTAGGAAATAGCTCGTTCTCTTATGTTGTCTACTTCCCTTCCTTTCTATCTTTAGGGCGATGGTTCTCACTATAGCCCATCTTATCAACTAAATGTCTTCTTGTGTCCTACATCTCTAGACCCTCTTAGAGTGTCTTAAAGAGTTGTATCTCTCTACCTATCTCATTTTTTATGTTCCTCTTCGAGTACTTGGGTGCACAACCTATGTTTATAACCATGGCTCTAACCCAACTAAGTTTACCTCTTGGGCTCAGACATGTGTTTTTGTTGGTTATATTCTACACCGAGATTATAAATGCTTTCATATGTCTTCTCGTAAGTACTTTGTCTCCATGGATGTCACATTTCTTGAGTATCGTCTTTTCTTTCCTGTTTGCCTACTTTAGGGGGAGAGTGAGAGTAAAGAGTTTAACTAGGTGATTTCCTTAGAGTCTACTAGCCTTACTCTTGTTACTCTACCTAGCCCAGATCCTCACAACATGGTTCTATCTACGAACCAAGTTCCTTGGAAAACCTACTATAGAAGGAATCTTAGAAAGGATGTTGGGTCTCCTACTATTCAGTCAGCTCCGGTTCAAGATTTTGAACTTTTACGAGATCAAGGTATGACTAATTCTATTGATTCACATATTGAGAGTAAAATGAGTGAAAGTGACAAGTCTGAGACAACTATTTCTAAAAATATAGGTGAACAAGGTAGTGTTGATACTGAGGTCATTCCAGATGGAAAGAGTAGTGATAATGGGAATGAGGTCATTACAAAAGTCATAGAGAGTGAAACTAGGGAGGACTACAGTTATGGAAGAAATGAGAGCCCTAGAAAAGAATAATACTTGGGAGCTCTGCACCCTCCCTGAGGGACATAAGACTAGGGATGCAAATGAGTGTTTACTATAAATAACAAAACAAATGGTACTCTTGACAAACATAAGGCCATGTTAGTTGCAAAAGGGTTCACTCAGACGTATGGGGTTAACTACTTTGAGATTCTCTCCTGTTGCAAATAAATTTAAACACTGCTAGGGTCTTGCTGTCTATTTCTATAAATAAAGATTGGCCTCTATACACTTGATGTTAAGAACGCGTTCCTAAATGGAGATTTAGAAGAGGAAGTGTATGAGTCGTGCACTAGGATTCAAAGTCCAGTTTGATCATCATGTTTGTATGGATTGAAATAATCACCAAGAGCTTGGTTTGACAGATGTACCACATTCGTCAAGTCTCAAGGATACACTTAGGGGCACTAAGATCACACTTTGTTCACTAAAGTCTCAAAGTCTGGGAAAATTACAGTTTTAATACTCTATGTTCGTGACATTGTTTATTCTAGAGATGACACCAATGAGATCCTCCAACTAAACAAGAAGATGTGGAATGAGTTTGTTATTAAAGACTTGGAGAATCTGAAATACTTCCTTATGATGGAAATTGCAAGATCTAGAGAGAGCATCTTTGTATCCCAGATGAAATACACCATTGATTTGTTAACTGAGATATGCATGTTAGGATGTCGTCTCACTAGTACACCTATTGAGTTTAATACCAAACTCAAGGATACAAGTGAAAAAGTTCTAATTGACAGAGAGAAATATCAGTGTTTGGTGGGTAGAATGATTTATTTATTTCACACTAAACCTGACATCTCATATACTATTAGTATTGTTTATCAATTCATGCAGACTCCTTATGAATAA

mRNA sequence

gtttgttatgaaatccaccttgagggggatcgtgctatgaatatttcggcaactcctgtcattgactccgctgattatagtgcgaggtcctctacatgtggaaatgagaacaatggaaaaataattcttgtctatgatcattgcaagaaacaatggcatattaaggagcattgttataagttacatggttgtcccccaggagataagaaacgctcttccaacgagaaacagaacacATggtgggcatatgtgaatgctaaaccttctcaatcacctgattcacatggaaaccagaccaatcctagtGCCActacttcaggtgccattgtccaatcaagtatacctcagtgctttggtcttattagcgtagatgggaagaactcttggactctggattctagtgctacaaattgttttattggttcctttgaacattttgtgttctatattccatgtgcttggaagatctttctctatgtagggttctcgttacataatattttgcatgtgtccaaaatttcttataatctactatctataagcaagattactcatgagttaaattgcaaagcaacatttttacctgattatgtttattttcaagacttgagcttagggaggatgattagcactgctcgacataatgctatgttgcattttcgtttaggccacccaaattttcaatatatggaacatttatttcctcatcttttctctaaaattgatgtatctatcttagcttgtgacatatgtatttgggctaaacaacatgaggtttcttttccttcacaaccatataaaccaatccaccctttcgcactagttcatggtaatgtctggggacctaccgcatttgggaaacagtggtttgtaatctttattgatatactcgtcttacttgggtctgtctcgtctctaaaaaaatctatggtcacttatgtctttcaagaattctatcagaccgtagaaatgcagtttaatgcaaaaattgttattctatggagtgacaatggacatgtgttccaaaatcacaccctcaatgagtttttgttctccaaagggattgttcaacaaatacttgggtgcacaacctatgtttataaccatggctctaacccaactaagtttacctcttgggctcagacatgtgtttttgttggttatattctacaccgagattataaatgctttcatatgtcttctcgtaagtactttgtctccatggatgtcacatttcttgagtatcgtcttttctttcctgtgatttccttagagtctactagccttactcttgttactctacctagcccagatcctcacaacatggttctatctacgaaccaagttccttggaaaacctactatagaaggaatcttagaaaggatgttgggtctcctactattcagtcagctccggttcaagattttgaacttttacgagatcaaggtatgactaattctattgattcacatattgagagtaaaatgagtgaaagtgacaagtctgagacaactatttctaaaaatataggtgaacaagatcacactttgttcactaaagtctcaaagtctgggaaaattacagttttaatactctatgttcgtgacattgtttattctagagatgacaccaatgagatcctccaactaaacaagaagatgtggaatgagtttgttattaaagacttggagaatctgaaatacttccttatgatggaaattgcaagatctagagagagcatctttgtatcccagatgaaatacaccattgatttgttaactgagatatgcatgttaggatgtcgtctcactagtacacctattgagtttaataccaaactcaaggatacaagtgaaaaagttctaattgacagagagaaatatcagtgtttggtgggtagaatgatttatttatttcacactaaacctgacatctcatatactattagtattgtttatcaattcatgcagactccttatgaataa

Coding sequence (CDS)

GTTTGTTATGAAATCCACCTTGAGGGGGATCGTGCTATGAATATTTCGGCAACTCCTGTCATTGACTCCGCTGATTATAGTGCGAGGTCCTCTACATGTGGAAATGAGAACAATGGAAAAATAATTCTTGTCTATGATCATTGCAAGAAACAATGGCATATTAAGGAGCATTGTTATAAGTTACATGGTTGTCCCCCAGGAGATAAGAAACGCTCTTCCAACGAGAAACAGAACACATGGTGGGCATATGTGAATGCTAAACCTTCTCAATCACCTGATTCACATGGAAACCAGACCAATCCTAGTGCCACTACTTCAGGTGCCATTGTCCAATCAAGTATACCTCAGTGCTTTGGTCTTATTAGCGTAGATGGGAAGAACTCTTGGACTCTGGATTCTAGTGCTACAAATTGTTTTATTGGTTCCTTTGAACATTTTGTGTTCTATATTCCATGTGCTTGGAAGATCTTTCTCTATGTAGGGTTCTCGTTACATAATATTTTGCATGTGTCCAAAATTTCTTATAATCTACTATCTATAAGCAAGATTACTCATGAGTTAAATTGCAAAGCAACATTTTTACCTGATTATGTTTATTTTCAAGACTTGAGCTTAGGGAGGATGATTAGCACTGCTCGACATAATGCTATGTTGCATTTTCGTTTAGGCCACCCAAATTTTCAATATATGGAACATTTATTTCCTCATCTTTTCTCTAAAATTGATGTATCTATCTTAGCTTGTGACATATGTATTTGGGCTAAACAACATGAGGTTTCTTTTCCTTCACAACCATATAAACCAATCCACCCTTTCGCACTAGTTCATGGTAATGTCTGGGGACCTACCGCATTTGGGAAACAGTGGTTTGTAATCTTTATTGATATACTCGTCTTACTTGGGTCTGTCTCGTCTCTAAAAAAATCTATGGTCACTTATGTCTTTCAAGAATTCTATCAGACCGTAGAAATGCAGTTTAATGCAAAAATTGTTATTCTATGGAGTGACAATGGACATGTGTTCCAAAATCACACCCTCAATGAGTTTTTGTTCTCCAAAGGGATTGTTCAACAAATACTTGGGTGCACAACCTATGTTTATAACCATGGCTCTAACCCAACTAAGTTTACCTCTTGGGCTCAGACATGTGTTTTTGTTGGTTATATTCTACACCGAGATTATAAATGCTTTCATATGTCTTCTCGTAAGTACTTTGTCTCCATGGATGTCACATTTCTTGAGTATCGTCTTTTCTTTCCTGTGATTTCCTTAGAGTCTACTAGCCTTACTCTTGTTACTCTACCTAGCCCAGATCCTCACAACATGGTTCTATCTACGAACCAAGTTCCTTGGAAAACCTACTATAGAAGGAATCTTAGAAAGGATGTTGGGTCTCCTACTATTCAGTCAGCTCCGGTTCAAGATTTTGAACTTTTACGAGATCAAGGTATGACTAATTCTATTGATTCACATATTGAGAGTAAAATGAGTGAAAGTGACAAGTCTGAGACAACTATTTCTAAAAATATAGGTGAACAAGATCACACTTTGTTCACTAAAGTCTCAAAGTCTGGGAAAATTACAGTTTTAATACTCTATGTTCGTGACATTGTTTATTCTAGAGATGACACCAATGAGATCCTCCAACTAAACAAGAAGATGTGGAATGAGTTTGTTATTAAAGACTTGGAGAATCTGAAATACTTCCTTATGATGGAAATTGCAAGATCTAGAGAGAGCATCTTTGTATCCCAGATGAAATACACCATTGATTTGTTAACTGAGATATGCATGTTAGGATGTCGTCTCACTAGTACACCTATTGAGTTTAATACCAAACTCAAGGATACAAGTGAAAAAGTTCTAATTGACAGAGAGAAATATCAGTGTTTGGTGGGTAGAATGATTTATTTATTTCACACTAAACCTGACATCTCATATACTATTAGTATTGTTTATCAATTCATGCAGACTCCTTATGAATAA

Protein sequence

VCYEIHLEGDRAMNISATPVIDSADYSARSSTCGNENNGKIILVYDHCKKQWHIKEHCYKLHGCPPGDKKRSSNEKQNTWWAYVNAKPSQSPDSHGNQTNPSATTSGAIVQSSIPQCFGLISVDGKNSWTLDSSATNCFIGSFEHFVFYIPCAWKIFLYVGFSLHNILHVSKISYNLLSISKITHELNCKATFLPDYVYFQDLSLGRMISTARHNAMLHFRLGHPNFQYMEHLFPHLFSKIDVSILACDICIWAKQHEVSFPSQPYKPIHPFALVHGNVWGPTAFGKQWFVIFIDILVLLGSVSSLKKSMVTYVFQEFYQTVEMQFNAKIVILWSDNGHVFQNHTLNEFLFSKGIVQQILGCTTYVYNHGSNPTKFTSWAQTCVFVGYILHRDYKCFHMSSRKYFVSMDVTFLEYRLFFPVISLESTSLTLVTLPSPDPHNMVLSTNQVPWKTYYRRNLRKDVGSPTIQSAPVQDFELLRDQGMTNSIDSHIESKMSESDKSETTISKNIGEQDHTLFTKVSKSGKITVLILYVRDIVYSRDDTNEILQLNKKMWNEFVIKDLENLKYFLMMEIARSRESIFVSQMKYTIDLLTEICMLGCRLTSTPIEFNTKLKDTSEKVLIDREKYQCLVGRMIYLFHTKPDISYTISIVYQFMQTPYE*

Homology

[Close]

BLAST of Cucsa.140490 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.2e-11
Identity = 44/130 (33.85%), Postives = 69/130 (53.08%), Query Frame = 1


Query: 530 LILYVRDIVYSRDDTNEILQLNKKMWNEFVIKDLENLKYFLMMEIARSRESIFVSQMKYT 589
           L+LYV DI+ +      +  L  ++ + F +KDL  + YFL ++I      +F+SQ KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 590 IDLLTEICMLGCRLTSTPIEFNTKLKDTSEKVLIDREKYQCLVGRMIYLFHTKPDISYTI 649
             +L    ML C+  STP+        ++ K   D   ++ +VG + YL  T+PDISY +
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 650 SIVYQFMQTP 660
           +IV Q M  P
Sbjct: 123 NIVCQRMHEP 131

[Close]

BLAST of Cucsa.140490 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 57.0 bits (136), Expect = 9.1e-07
Identity = 32/129 (24.81%), Postives = 69/129 (53.49%), Query Frame = 1


Query: 530  LILYVRDIVYSRDDTNEILQLNKKMWNEFVIKDLENLKYFLMMEIARSRESIFVSQMKYT 589
            ++LYV D+V +  D   +    + +  +F + DL  +K+F+ + I    + I++SQ  Y 
Sbjct: 1084 VLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYV 1143

Query: 590  IDLLTEICMLGCRLTSTPI--EFNTKLKDTSEKVLIDREKYQCLVGRMIY-LFHTKPDIS 649
              +L++  M  C   STP+  + N +L ++ E         + L+G ++Y +  T+PD++
Sbjct: 1144 KKILSKFNMENCNAVSTPLPSKINYELLNSDEDC---NTPCRSLIGCLMYIMLCTRPDLT 1203

Query: 650  YTISIVYQF 656
              ++I+ ++
Sbjct: 1204 TAVNILSRY 1209

[Close]

BLAST of Cucsa.140490 vs. TrEMBL
Match: A5AYJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041073 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 7.9e-42
Identity = 134/412 (32.52%), Postives = 185/412 (44.90%), Query Frame = 1


Query: 17  ATPVIDSADYSARSSTCGNENNGKIILVYDHCKKQWHIKEHCYKLHGCPPGDKKRSSNEK 76
           + P I+S+   ++ S    +   K     DHCKK WH K  C+K+HG P   KK++ ++ 
Sbjct: 233 SNPEIESSALVSKGSDLDGDRRKKPWC--DHCKKPWHTKGTCWKIHGKPQNFKKKNGSDG 292

Query: 77  QNTWWAYVNAKPSQSPDSHGNQTNPSATTSGAIVQS---SIPQC------------FGLI 136
           +       +++  Q      N T    +    + QS   S P C               I
Sbjct: 293 RAFQTMSADSQGPQINSEKPNFTKEQLSHLYKLFQSPQFSNPSCSLAQQGNYLIAALSSI 352

Query: 137 SVDGKNSWTLDSSATNCFIGSFEHFVFYIPCAWK------------------IFLYVGFS 196
             +    W +DS AT+   GS + F  Y PCA                    +F+    +
Sbjct: 353 KSNVHCPWIIDSGATDHMTGSSQIFSSYKPCAGNKKIKIXDGSLSAIAGKGSVFISPSLT 412

Query: 197 LHNILHVSKISYNLLSIS----------------KITHELNCKATF-----LPDYVYFQD 256
           LHN+LHV  +S NLLSIS                    EL    T      +    +F++
Sbjct: 413 LHNVLHVPNLSCNLLSISKITQDHQCQANFYPSYCEFQELTSGRTIGNAREIGGLYFFEN 472

Query: 257 LSLGRM---------ISTARHNAML--HFRLGHPNFQYMEHLFPHLFSKIDVSILACDIC 316
            S  R          IS A  + ++  H+RLGHP+FQY++HLFP LF   + S   C+ C
Sbjct: 473 GSESRKPIQSTCFESISVASSDDIILWHYRLGHPSFQYLKHLFPSLFRNKNPSSFQCEFC 532

Query: 317 IWAKQHEVSFPSQPYKPIHPFALVHGNVWGP----TAFGKQWFVIFIDILVLLGSVSSLK 359
             AK H  SFP QPY+   PF+L+H +VWGP    T  GK+WFV FID    +  V  L+
Sbjct: 533 ELAKHHRTSFPLQPYRISKPFSLIHSDVWGPSRISTLSGKKWFVTFIDDHTRVSWVYLLR 592

[Close]

BLAST of Cucsa.140490 vs. TrEMBL
Match: A5AYJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041073 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 2.5e-35
Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 1


Query: 504  TTISKNIG----EQDHTLFTKVSKSGKITVLILYVRDIVYSRDDTNEILQLNKKMWNEFV 563
            T   KN G    + DHT+F K S  GKI +LI+YV DI+ + D   E+ +L K +  EF 
Sbjct: 1155 TQFVKNQGYVQAQSDHTMFIKHSNDGKIAILIVYVDDIILTGDHVTEMDRLKKSLALEFE 1214

Query: 564  IKDLENLKYFLMMEIARSRESIFVSQMKYTIDLLTEICMLGCRLTSTPIEFNTKLKDTSE 623
            IKDL +L+YFL ME+ARS+  I VSQ KY +DLL E  M GCR   TPI+ N KL DT++
Sbjct: 1215 IKDLGSLRYFLGMEVARSKRGIVVSQRKYILDLLKETGMSGCRPADTPIDPNQKLGDTND 1274

Query: 624  KVLIDREKYQCLVGRMIYLFHTKPDISYTISIVYQFMQTPYE 662
              L++  +YQ LVG++IYL HT+PDI++ +SIV QFM +PYE
Sbjct: 1275 GNLVNTTRYQKLVGKLIYLSHTRPDIAFAVSIVSQFMHSPYE 1316

HSP 2 Score: 73.2 bits (178), Expect = 1.4e-09
Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = 1


Query: 349 FLFSKGIVQQILGCTTYVYNHGSNPTKFTSWAQTCVFVGYI-LHRDYKCFHMSSRKYFVS 408
           F  S  +  +I GCTT+V+ H  N  K    A+ CVFVGY    + YKCF   S+K FV+
Sbjct: 715 FRLSSTLPLKIFGCTTFVHIHDHNRGKLDPRARKCVFVGYAPTQKGYKCFDPISKKLFVT 774

Query: 409 MDVTFLEYRLFFPV-ISLESTS-----LTLVTLPSPDPHNMVLSTN 448
           MDVTF E + FF   +  ESTS       +   P+P+P+N++  +N
Sbjct: 775 MDVTFFESKPFFATHLQGESTSEDSDLFKIEKTPTPNPNNLLEPSN 820

HSP 3 Score: 178.3 bits (451), Expect = 3.0e-41
Identity = 125/390 (32.05%), Postives = 180/390 (46.15%), Query Frame = 1


Query: 46  DHCKKQWHIKEHCYKLHGCPPGDKKRSSNEK---QNTWWAYVNAKPS---QSPDSHGNQT 105
           +HCKK  H K+ C+ LHG P   K R  N+    Q +  A  +  P+   QS  S G  +
Sbjct: 308 EHCKKLGHTKDTCWALHGKPADWKPRQPNKAHSHQASTEAQADKTPTEVCQSTSSVGFNS 367

Query: 106 NPSA------TTSGAIVQSSIPQCFGLISVDGKN-----------SWTLDSSATNCFIGS 165
           N  A      +   A  QSS     G ++  G              W +DS A++    +
Sbjct: 368 NQIAKLYELFSNFQASGQSSTTLSSGSLAKKGTFLTALSTMSQTIPWIVDSGASDHMTDA 427

Query: 166 FEHFVFYIPCAWKIFLYVG------------------FSLHNILHVSKISYNLLSISKIT 225
              F  Y PCA  + + +                    +L+ +LHV  +S NLLSIS++T
Sbjct: 428 HHLFSTYSPCAGNLKVKIADGTLSPVAGKGSIRISESITLNPVLHVPNLSCNLLSISQLT 487

Query: 226 HELNCKATFLPDYVYFQDLSLGRMISTARHNAMLHF------------------------ 285
            + NC A FL  +  FQDLS G+ I +A+    L++                        
Sbjct: 488 KKSNCSAKFLSSHCVFQDLSSGKTIGSAKEREGLYYFDETDVLGQSSPTVCNSTSYSKDS 547

Query: 286 -------RLGHPNFQYMEHLFPHLFSKIDVSILACDICIWAKQHEVSFPSQPYKPIHPFA 345
                  R+GHP+FQY++HLFP L S   +    C++C  AK H  SFP   YKP  PF 
Sbjct: 548 ELLLWHKRMGHPSFQYLKHLFPSLCSNKTILDFQCEVCELAKHHRTSFPKSKYKPSIPFT 607

Query: 346 LVHGNVWGPT----AFGKQWFVIFIDILVLLGSVSSL-KKSMVTYVFQEFYQTVEMQFNA 359
           L+H ++WGP+       K+WF+ FID    L  V  L  K+ V  VF  F+  ++ QF+ 
Sbjct: 608 LIHSDLWGPSRTPNRTHKKWFITFIDDHTRLCWVYLLTDKTEVRSVFMNFHYMIQTQFHT 667

[Close]

BLAST of Cucsa.140490 vs. TrEMBL
Match: A5C6A5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042891 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 3.8e-36
Identity = 77/151 (50.99%), Postives = 110/151 (72.85%), Query Frame = 1


Query: 511  GEQDHTLFTKVSKSGKITVLILYVRDIVYSRDDTNEILQLNKKMWNEFVIKDLENLKYFL 570
            G+ DHT+F K S  G++T+LI+YV DI+ + DDT E+ +L K +  EF +KDL  ++YFL
Sbjct: 1156 GQSDHTMFFKQSNDGRMTILIVYVDDIILTGDDTGEVERLKKVLATEFEVKDLGQMRYFL 1215

Query: 571  MMEIARSRESIFVSQMKYTIDLLTEICMLGCRLTSTPIEFNTKLKDTSEKVLIDREKYQC 630
             ME+ARSR+ I +SQ KY +DLLTE  MLGC+ + TPI+   +++   + V  DREKYQ 
Sbjct: 1216 GMEVARSRKGISISQRKYVLDLLTETGMLGCKPSDTPIKARNRMESDGKPV--DREKYQR 1275

Query: 631  LVGRMIYLFHTKPDISYTISIVYQFMQTPYE 662
            LVGR+IYL HT+PDI++ +S+V Q+M +P E
Sbjct: 1276 LVGRLIYLSHTRPDIAFAVSVVSQYMHSPKE 1304

HSP 2 Score: 49.3 bits (116), Expect = 2.1e-02
Identity = 27/74 (36.49%), Postives = 41/74 (55.41%), Query Frame = 1


Query: 358 QILGCTTYVYNHGSNPTKFTSWAQTCVFVGYI-LHRDYKCFHMSSRKYFVSMDVTFLEYR 417
           ++ G T +V+ HG    KF   A   VF+GY    + YKC+   S+K +VS+DVTF  + 
Sbjct: 779 RVFGSTVFVHIHGPKRNKFDPRALKXVFLGYSSTQKGYKCYDPISQKLYVSLDVTFFXHT 838

Query: 418 LFFPVISLESTSLT 431
              P  SL+  S++
Sbjct: 839 ---PYYSLQGESMS 849

HSP 3 Score: 171.8 bits (434), Expect = 2.8e-39
Identity = 98/228 (42.98%), Postives = 121/228 (53.07%), Query Frame = 1


Query: 165 HNILHVSKISYNLLSISKITHELNCKATFLPDYVYFQDLSLGRMISTARHNAML------ 224
           H+ LHV K+S NL+S+SK+T  LNC+A F  D   FQ+   G+MI +AR +  L      
Sbjct: 45  HDTLHVPKLSCNLVSVSKLTRSLNCRAIFDSDLCEFQEKVSGKMIGSARESGGLYFLDNG 104

Query: 225 -----------------------HFRLGHPNFQYMEHLFPHLFSKIDVSILACDICIWAK 284
                                  H+RLGHP+F Y+ HL P LF   + S+  C+ C  AK
Sbjct: 105 NNSLQLNPICLNSTFVLNKVMLWHYRLGHPSFYYLRHLLPQLFRNKNPSLFQCEFCEMAK 164

Query: 285 QHEVSFPSQPYKPIHPFALVHGNVWGP----TAFGKQWFVIFIDILVLLGSVSSLK-KSM 344
            H  SFPSQ Y+   PF ++H +VWGP    T FGK+WFV FID    L  V  LK KS 
Sbjct: 165 HHRSSFPSQRYQASKPFTMIHSDVWGPSRISTMFGKRWFVTFIDDHTRLSWVFLLKDKSE 224

Query: 345 VTYVFQEFYQTVEMQFNAKIVILWSDNGHVFQNHTLNEFLFSKGIVQQ 359
           V  VF+ FY  VE QFN KI I  SDNG  F N  L  F    G+V Q
Sbjct: 225 VKNVFETFYVMVETQFNEKIKIFRSDNGREFFNEQLGSFFRKTGVVHQ 272

[Close]

BLAST of Cucsa.140490 vs. TrEMBL
Match: A0A0V0IZR1_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-04
Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 1


Query: 358 QILGCTTYVYNHGSNPTKFTSWAQTCVFVGYI-LHRDYKCFHMSSRKYFVSMDVTFLEYR 417
           ++ GCTT+V+ H  N +K    A+ C+FVGY    + YKC+   +RK  V+MD+TF E +
Sbjct: 354 RVFGCTTFVHVH--NRSKLEPRAKKCIFVGYAPSQKGYKCYDPHARKIIVTMDLTFFESQ 413

Query: 418 LFF 420
           L+F
Sbjct: 414 LYF 414

HSP 2 Score: 168.7 bits (426), Expect = 2.4e-38
Identity = 101/281 (35.94%), Postives = 146/281 (51.96%), Query Frame = 1


Query: 163 SLHNILHVSKISYNLLSISKITHELNCKATFLPDYVYFQDLSLGRMISTARHNA------ 222
           +L  +L V  + YNL S+S+IT  L+C   F P +   +     ++      +       
Sbjct: 124 NLDYVLVVPSLYYNLFSVSQITAALSCIVIFWPKFCVIKSKDSNKLQQALMADGSEKEKK 183

Query: 223 -----MLHFRLGHPNFQYMEHLFPHLFSKIDVSILACDICIWAKQHEVSFPSQPYKPIHP 282
                + H RLGH +F Y++ LFP LF+K D+S   CDIC  AK H VSFP    K   P
Sbjct: 184 KSEIWLWHRRLGHASFGYLKKLFPSLFAKSDISGFRCDICELAKSHRVSFPLILNKSPLP 243

Query: 283 FALVHGNVWG----PTAFGKQWFVIFIDILVLLGSVSSLK-KSMVTYVFQEFYQTVEMQF 342
           F ++H +VWG    PT  G +WFV FID    +  +  +K K  V  +FQ F++ +E Q+
Sbjct: 244 FMVLHSDVWGPSKVPTLSGSRWFVTFIDDCTRMTWLCLMKTKDEVNLLFQNFHKMIETQY 303

Query: 343 NAKIVILWSDNGHVFQNHTLNEFL--------FSKGIV--------QQILGCTTYVYNHG 402
           NAK+ +L SDNG  +Q+  L   +         +  IV         ++ GC  +V+ H 
Sbjct: 304 NAKVRVLRSDNGGEYQSSDLQNLINFQTPLQALTNAIVAPTVPNLPPRVFGCMEFVHLHK 363

Query: 403 SNPTKFTSWAQTCVFVGYILH-RDYKCFHMSSRKYFVSMDV 411
              TK TS A  CVFVGY LH + Y+C+H  +R  F++MDV
Sbjct: 364 HQRTKLTSHALQCVFVGYALHKKGYRCYHPPTRLMFITMDV 404

[Close]

BLAST of Cucsa.140490 vs. TrEMBL
Match: A5AD36_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036095 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 8.2e-23
Identity = 66/148 (44.59%), Postives = 91/148 (61.49%), Query Frame = 1


Query: 514 DHTLFTKVSKSGKITVLILYVRDIVYSRDDTNEILQLNKKMWNEFVIKDLENLKYFLMME 573
           DHTLF K  + GKIT LI+YV D+V +R+D  E   L   ++ EF +KDL  LKYFL + 
Sbjct: 704 DHTLFLK-KQHGKITTLIVYVDDMVVTRNDPEERKALQNYLFREFEMKDLGPLKYFLGIX 763

Query: 574 IARSRESIFVSQMKYTIDLLTEICMLGCRLTSTPIEFNTKLKDTSEKVLIDREKYQCLVG 633
           ++RS E IF+SQ KY +DLL E  MLGC+  +TPIE   K+ +T               G
Sbjct: 764 VSRSSEGIFLSQRKYALDLLQETGMLGCQPVNTPIE-EGKIPET--------------CG 823

Query: 634 RMIYLFHTKPDISYTISIVYQFMQTPYE 662
            ++YL HT P+++Y +S+V Q+M  P E
Sbjct: 824 ELMYLAHTSPNLAYALSVVSQYMHNPGE 835

HSP 2 Score: 166.4 bits (420), Expect = 1.2e-37
Identity = 83/148 (56.08%), Postives = 107/148 (72.30%), Query Frame = 1


Query: 512 EQDHTLFTKVSKSGKITVLILYVRDIVYSRDDTNEILQLNKKMWNEFVIKDLENLKYFLM 571
           + DHT+F K S  GK+ +LI+YV DIV + DD NE+ +L  K+  EF IKDLE LKYFL 
Sbjct: 623 QADHTMFYKHSNEGKVVILIVYVDDIVLTGDDCNELEKLKGKLAEEFEIKDLEALKYFLG 682

Query: 572 MEIARSRESIFVSQMKYTIDLLTEICMLGCRLTSTPIEFNTKLKDTSEKVLIDREKYQCL 631
           ME ARS+E IFV+Q KY +DLL E  MLG +   TPIE N KL+ T  K + DR++YQ L
Sbjct: 683 MEFARSKEGIFVNQRKYVLDLLNETGMLGXKPAETPIELNVKLQPTKAKNVKDRDRYQRL 742

Query: 632 VGRMIYLFHTKPDISYTISIVYQFMQTP 660
           VGR+IYL HT+PDI++++S+V QFM  P
Sbjct: 743 VGRLIYLSHTRPDIAFSVSMVSQFMHAP 770

[Close]

BLAST of Cucsa.140490 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 97.4 bits (241), Expect = 3.4e-20
Identity = 53/146 (36.30%), Postives = 89/146 (60.96%), Query Frame = 1


Query: 514 DHTLFTKVSKSGKITVLILYVRDIVYSRDDTNEILQLNKKMWNEFVIKDLENLKYFLMME 573
           DHT F K++ +  + VL+ YV DI+   ++   + +L  ++ + F ++DL  LKYFL +E
Sbjct: 265 DHTYFLKITATLFLCVLV-YVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLE 324

Query: 574 IARSRESIFVSQMKYTIDLLTEICMLGCRLTSTPIEFNTKLKDTSEKVLIDREKYQCLVG 633
           IARS   I + Q KY +DLL E  +LGC+ +S P++ +      S    +D + Y+ L+G
Sbjct: 325 IARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 384

Query: 634 RMIYLFHTKPDISYTISIVYQFMQTP 660
           R++YL  T+ DIS+ ++ + QF + P
Sbjct: 385 RLMYLQITRLDISFAVNKLSQFSEAP 409

[Close]

BLAST of Cucsa.140490 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 6.9e-13
Identity = 44/130 (33.85%), Postives = 69/130 (53.08%), Query Frame = 1


Query: 530 LILYVRDIVYSRDDTNEILQLNKKMWNEFVIKDLENLKYFLMMEIARSRESIFVSQMKYT 589
           L+LYV DI+ +      +  L  ++ + F +KDL  + YFL ++I      +F+SQ KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 590 IDLLTEICMLGCRLTSTPIEFNTKLKDTSEKVLIDREKYQCLVGRMIYLFHTKPDISYTI 649
             +L    ML C+  STP+        ++ K   D   ++ +VG + YL  T+PDISY +
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 650 SIVYQFMQTP 660
           +IV Q M  P
Sbjct: 123 NIVCQRMHEP 131

[Close]

BLAST of Cucsa.140490 vs. NCBI nr
Match: gi|147819777|emb|CAN76196.1| (hypothetical protein VITISV_041073 [Vitis vinifera])

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-41
Identity = 134/412 (32.52%), Postives = 185/412 (44.90%), Query Frame = 1


Query: 17  ATPVIDSADYSARSSTCGNENNGKIILVYDHCKKQWHIKEHCYKLHGCPPGDKKRSSNEK 76
           + P I+S+   ++ S    +   K     DHCKK WH K  C+K+HG P   KK++ ++ 
Sbjct: 233 SNPEIESSALVSKGSDLDGDRRKKPWC--DHCKKPWHTKGTCWKIHGKPQNFKKKNGSDG 292

Query: 77  QNTWWAYVNAKPSQSPDSHGNQTNPSATTSGAIVQS---SIPQC------------FGLI 136
           +       +++  Q      N T    +    + QS   S P C               I
Sbjct: 293 RAFQTMSADSQGPQINSEKPNFTKEQLSHLYKLFQSPQFSNPSCSLAQQGNYLIAALSSI 352

Query: 137 SVDGKNSWTLDSSATNCFIGSFEHFVFYIPCAWK------------------IFLYVGFS 196
             +    W +DS AT+   GS + F  Y PCA                    +F+    +
Sbjct: 353 KSNVHCPWIIDSGATDHMTGSSQIFSSYKPCAGNKKIKIXDGSLSAIAGKGSVFISPSLT 412

Query: 197 LHNILHVSKISYNLLSIS----------------KITHELNCKATF-----LPDYVYFQD 256
           LHN+LHV  +S NLLSIS                    EL    T      +    +F++
Sbjct: 413 LHNVLHVPNLSCNLLSISKITQDHQCQANFYPSYCEFQELTSGRTIGNAREIGGLYFFEN 472

Query: 257 LSLGRM---------ISTARHNAML--HFRLGHPNFQYMEHLFPHLFSKIDVSILACDIC 316
            S  R          IS A  + ++  H+RLGHP+FQY++HLFP LF   + S   C+ C
Sbjct: 473 GSESRKPIQSTCFESISVASSDDIILWHYRLGHPSFQYLKHLFPSLFRNKNPSSFQCEFC 532

Query: 317 IWAKQHEVSFPSQPYKPIHPFALVHGNVWGP----TAFGKQWFVIFIDILVLLGSVSSLK 359
             AK H  SFP QPY+   PF+L+H +VWGP    T  GK+WFV FID    +  V  L+
Sbjct: 533 ELAKHHRTSFPLQPYRISKPFSLIHSDVWGPSRISTLSGKKWFVTFIDDHTRVSWVYLLR 592

[Close]

BLAST of Cucsa.140490 vs. NCBI nr
Match: gi|147819777|emb|CAN76196.1| (hypothetical protein VITISV_041073 [Vitis vinifera])

HSP 1 Score: 158.7 bits (400), Expect = 3.5e-35
Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 1


Query: 504  TTISKNIG----EQDHTLFTKVSKSGKITVLILYVRDIVYSRDDTNEILQLNKKMWNEFV 563
            T   KN G    + DHT+F K S  GKI +LI+YV DI+ + D   E+ +L K +  EF 
Sbjct: 1155 TQFVKNQGYVQAQSDHTMFIKHSNDGKIAILIVYVDDIILTGDHVTEMDRLKKSLALEFE 1214

Query: 564  IKDLENLKYFLMMEIARSRESIFVSQMKYTIDLLTEICMLGCRLTSTPIEFNTKLKDTSE 623
            IKDL +L+YFL ME+ARS+  I VSQ KY +DLL E  M GCR   TPI+ N KL DT++
Sbjct: 1215 IKDLGSLRYFLGMEVARSKRGIVVSQRKYILDLLKETGMSGCRPADTPIDPNQKLGDTND 1274

Query: 624  KVLIDREKYQCLVGRMIYLFHTKPDISYTISIVYQFMQTPYE 662
              L++  +YQ LVG++IYL HT+PDI++ +SIV QFM +PYE
Sbjct: 1275 GNLVNTTRYQKLVGKLIYLSHTRPDIAFAVSIVSQFMHSPYE 1316

HSP 2 Score: 73.2 bits (178), Expect = 2.0e-09
Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = 1


Query: 349 FLFSKGIVQQILGCTTYVYNHGSNPTKFTSWAQTCVFVGYI-LHRDYKCFHMSSRKYFVS 408
           F  S  +  +I GCTT+V+ H  N  K    A+ CVFVGY    + YKCF   S+K FV+
Sbjct: 715 FRLSSTLPLKIFGCTTFVHIHDHNRGKLDPRARKCVFVGYAPTQKGYKCFDPISKKLFVT 774

Query: 409 MDVTFLEYRLFFPV-ISLESTS-----LTLVTLPSPDPHNMVLSTN 448
           MDVTF E + FF   +  ESTS       +   P+P+P+N++  +N
Sbjct: 775 MDVTFFESKPFFATHLQGESTSEDSDLFKIEKTPTPNPNNLLEPSN 820

HSP 3 Score: 178.3 bits (451), Expect = 4.3e-41
Identity = 125/390 (32.05%), Postives = 180/390 (46.15%), Query Frame = 1


Query: 46  DHCKKQWHIKEHCYKLHGCPPGDKKRSSNEK---QNTWWAYVNAKPS---QSPDSHGNQT 105
           +HCKK  H K+ C+ LHG P   K R  N+    Q +  A  +  P+   QS  S G  +
Sbjct: 308 EHCKKLGHTKDTCWALHGKPADWKPRQPNKAHSHQASTEAQADKTPTEVCQSTSSVGFNS 367

Query: 106 NPSA------TTSGAIVQSSIPQCFGLISVDGKN-----------SWTLDSSATNCFIGS 165
           N  A      +   A  QSS     G ++  G              W +DS A++    +
Sbjct: 368 NQIAKLYELFSNFQASGQSSTTLSSGSLAKKGTFLTALSTMSQTIPWIVDSGASDHMTDA 427

Query: 166 FEHFVFYIPCAWKIFLYVG------------------FSLHNILHVSKISYNLLSISKIT 225
              F  Y PCA  + + +                    +L+ +LHV  +S NLLSIS++T
Sbjct: 428 HHLFSTYSPCAGNLKVKIADGTLSPVAGKGSIRISESITLNPVLHVPNLSCNLLSISQLT 487

Query: 226 HELNCKATFLPDYVYFQDLSLGRMISTARHNAMLHF------------------------ 285
            + NC A FL  +  FQDLS G+ I +A+    L++                        
Sbjct: 488 KKSNCSAKFLSSHCVFQDLSSGKTIGSAKEREGLYYFDETDVLGQSSPTVCNSTSYSKDS 547

Query: 286 -------RLGHPNFQYMEHLFPHLFSKIDVSILACDICIWAKQHEVSFPSQPYKPIHPFA 345
                  R+GHP+FQY++HLFP L S   +    C++C  AK H  SFP   YKP  PF 
Sbjct: 548 ELLLWHKRMGHPSFQYLKHLFPSLCSNKTILDFQCEVCELAKHHRTSFPKSKYKPSIPFT 607

Query: 346 LVHGNVWGPT----AFGKQWFVIFIDILVLLGSVSSL-KKSMVTYVFQEFYQTVEMQFNA 359
           L+H ++WGP+       K+WF+ FID    L  V  L  K+ V  VF  F+  ++ QF+ 
Sbjct: 608 LIHSDLWGPSRTPNRTHKKWFITFIDDHTRLCWVYLLTDKTEVRSVFMNFHYMIQTQFHT 667

[Close]

BLAST of Cucsa.140490 vs. NCBI nr
Match: gi|147792973|emb|CAN73102.1| (hypothetical protein VITISV_042891 [Vitis vinifera])

HSP 1 Score: 161.4 bits (407), Expect = 5.5e-36
Identity = 77/151 (50.99%), Postives = 110/151 (72.85%), Query Frame = 1


Query: 511  GEQDHTLFTKVSKSGKITVLILYVRDIVYSRDDTNEILQLNKKMWNEFVIKDLENLKYFL 570
            G+ DHT+F K S  G++T+LI+YV DI+ + DDT E+ +L K +  EF +KDL  ++YFL
Sbjct: 1156 GQSDHTMFFKQSNDGRMTILIVYVDDIILTGDDTGEVERLKKVLATEFEVKDLGQMRYFL 1215

Query: 571  MMEIARSRESIFVSQMKYTIDLLTEICMLGCRLTSTPIEFNTKLKDTSEKVLIDREKYQC 630
             ME+ARSR+ I +SQ KY +DLLTE  MLGC+ + TPI+   +++   + V  DREKYQ 
Sbjct: 1216 GMEVARSRKGISISQRKYVLDLLTETGMLGCKPSDTPIKARNRMESDGKPV--DREKYQR 1275

Query: 631  LVGRMIYLFHTKPDISYTISIVYQFMQTPYE 662
            LVGR+IYL HT+PDI++ +S+V Q+M +P E
Sbjct: 1276 LVGRLIYLSHTRPDIAFAVSVVSQYMHSPKE 1304

HSP 2 Score: 49.3 bits (116), Expect = 3.0e-02
Identity = 27/74 (36.49%), Postives = 41/74 (55.41%), Query Frame = 1


Query: 358 QILGCTTYVYNHGSNPTKFTSWAQTCVFVGYI-LHRDYKCFHMSSRKYFVSMDVTFLEYR 417
           ++ G T +V+ HG    KF   A   VF+GY    + YKC+   S+K +VS+DVTF  + 
Sbjct: 779 RVFGSTVFVHIHGPKRNKFDPRALKXVFLGYSSTQKGYKCYDPISQKLYVSLDVTFFXHT 838

Query: 418 LFFPVISLESTSLT 431
              P  SL+  S++
Sbjct: 839 ---PYYSLQGESMS 849

HSP 3 Score: 168.7 bits (426), Expect = 3.4e-38
Identity = 101/281 (35.94%), Postives = 146/281 (51.96%), Query Frame = 1


Query: 163 SLHNILHVSKISYNLLSISKITHELNCKATFLPDYVYFQDLSLGRMISTARHNA------ 222
           +L  +L V  + YNL S+S+IT  L+C   F P +   +     ++      +       
Sbjct: 124 NLDYVLVVPSLYYNLFSVSQITAALSCIVIFWPKFCVIKSKDSNKLQQALMADGSEKEKK 183

Query: 223 -----MLHFRLGHPNFQYMEHLFPHLFSKIDVSILACDICIWAKQHEVSFPSQPYKPIHP 282
                + H RLGH +F Y++ LFP LF+K D+S   CDIC  AK H VSFP    K   P
Sbjct: 184 KSEIWLWHRRLGHASFGYLKKLFPSLFAKSDISGFRCDICELAKSHRVSFPLILNKSPLP 243

Query: 283 FALVHGNVWG----PTAFGKQWFVIFIDILVLLGSVSSLK-KSMVTYVFQEFYQTVEMQF 342
           F ++H +VWG    PT  G +WFV FID    +  +  +K K  V  +FQ F++ +E Q+
Sbjct: 244 FMVLHSDVWGPSKVPTLSGSRWFVTFIDDCTRMTWLCLMKTKDEVNLLFQNFHKMIETQY 303

Query: 343 NAKIVILWSDNGHVFQNHTLNEFL--------FSKGIV--------QQILGCTTYVYNHG 402
           NAK+ +L SDNG  +Q+  L   +         +  IV         ++ GC  +V+ H 
Sbjct: 304 NAKVRVLRSDNGGEYQSSDLQNLINFQTPLQALTNAIVAPTVPNLPPRVFGCMEFVHLHK 363

Query: 403 SNPTKFTSWAQTCVFVGYILH-RDYKCFHMSSRKYFVSMDV 411
              TK TS A  CVFVGY LH + Y+C+H  +R  F++MDV
Sbjct: 364 HQRTKLTSHALQCVFVGYALHKKGYRCYHPPTRLMFITMDV 404

[Close]

BLAST of Cucsa.140490 vs. NCBI nr
Match: gi|147786884|emb|CAN77807.1| (hypothetical protein VITISV_036095 [Vitis vinifera])

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-22
Identity = 66/148 (44.59%), Postives = 91/148 (61.49%), Query Frame = 1


Query: 514 DHTLFTKVSKSGKITVLILYVRDIVYSRDDTNEILQLNKKMWNEFVIKDLENLKYFLMME 573
           DHTLF K  + GKIT LI+YV D+V +R+D  E   L   ++ EF +KDL  LKYFL + 
Sbjct: 704 DHTLFLK-KQHGKITTLIVYVDDMVVTRNDPEERKALQNYLFREFEMKDLGPLKYFLGIX 763

Query: 574 IARSRESIFVSQMKYTIDLLTEICMLGCRLTSTPIEFNTKLKDTSEKVLIDREKYQCLVG 633
           ++RS E IF+SQ KY +DLL E  MLGC+  +TPIE   K+ +T               G
Sbjct: 764 VSRSSEGIFLSQRKYALDLLQETGMLGCQPVNTPIE-EGKIPET--------------CG 823

Query: 634 RMIYLFHTKPDISYTISIVYQFMQTPYE 662
            ++YL HT P+++Y +S+V Q+M  P E
Sbjct: 824 ELMYLAHTSPNLAYALSVVSQYMHNPGE 835

HSP 2 Score: 166.4 bits (420), Expect = 1.7e-37
Identity = 83/148 (56.08%), Postives = 107/148 (72.30%), Query Frame = 1


Query: 512 EQDHTLFTKVSKSGKITVLILYVRDIVYSRDDTNEILQLNKKMWNEFVIKDLENLKYFLM 571
           + DHT+F K S  GK+ +LI+YV DIV + DD NE+ +L  K+  EF IKDLE LKYFL 
Sbjct: 623 QADHTMFYKHSNEGKVVILIVYVDDIVLTGDDCNELEKLKGKLAEEFEIKDLEALKYFLG 682

Query: 572 MEIARSRESIFVSQMKYTIDLLTEICMLGCRLTSTPIEFNTKLKDTSEKVLIDREKYQCL 631
           ME ARS+E IFV+Q KY +DLL E  MLG +   TPIE N KL+ T  K + DR++YQ L
Sbjct: 683 MEFARSKEGIFVNQRKYVLDLLNETGMLGXKPAETPIELNVKLQPTKAKNVKDRDRYQRL 742

Query: 632 VGRMIYLFHTKPDISYTISIVYQFMQTP 660
           VGR+IYL HT+PDI++++S+V QFM  P
Sbjct: 743 VGRLIYLSHTRPDIAFSVSMVSQFMHAP 770

[Close]

BLAST of Cucsa.140490 vs. NCBI nr
Match: gi|147852115|emb|CAN82268.1| (hypothetical protein VITISV_009286 [Vitis vinifera])

HSP 1 Score: 68.2 bits (165), Expect = 6.3e-08
Identity = 55/219 (25.11%), Postives = 90/219 (41.10%), Query Frame = 1


Query: 46  DHCKKQWHIKEHCYKLHGCPPGDKKRSSNEKQNTWWAYVNAKPSQSPDSHGNQTNPSATT 105
           D C K  H +E+ +K+HG            K   W      KP ++     N+T  S  T
Sbjct: 235 DFCNKPRHTRENYWKIHG------------KLANWKGKTGDKPGRAIIPTANETETSXFT 294

Query: 106 SG------AIVQSSIPQCFGLISVDGKNS-------------WTLDSSATNCFIGSFEHF 165
           +       A+++S++      +S+   ++             W +DS A++    S   F
Sbjct: 295 TXQMEHLLALLKSNLTSXTSSVSLAHTSNELYALSCXFKSTPWIIDSGASDHMTNSSNMF 354

Query: 166 VFYIPCAWK------------------IFLYVGFSLHNILHVSKISYNLLSISKITHELN 225
             Y PC                     I +  G  L ++LHV K++ NLLS+SK++ + N
Sbjct: 355 ESYSPCPGNKKVRIABXNFSPIAXKGLIKISXGIDLKSVLHVPKLTCNLLSVSKLSKDSN 414

Query: 226 CKATFLPDYVYFQDLSLGRMISTARH-NAMLHFRLGHPN 227
           C   F   +  FQD S G+ I +AR  N + +F    P+
Sbjct: 415 CCVIFYESHCIFQDQSSGKTIGSARMINGLYYFEDNLPS 441

HSP 2 Score: 166.0 bits (419), Expect = 2.2e-37
Identity = 83/151 (54.97%), Postives = 108/151 (71.52%), Query Frame = 1


Query: 509 NIGEQDHTLFTKVSKSGKITVLILYVRDIVYSRDDTNEILQLNKKMWNEFVIKDLENLKY 568
           N  + DHT+F K S+SGKI++LI+YV DI+ + DD  E+  L +KM  +F IKDL  LKY
Sbjct: 47  NQSQADHTMFYKHSESGKISILIVYVDDIILTGDDPKELADLREKMARDFEIKDLGVLKY 106

Query: 569 FLMMEIARSRESIFVSQMKYTIDLLTEICMLGCRLTSTPIEFNTKLKDTSEKVLIDREKY 628
           FL ME ARS+E IFV+Q KY +DLL E   LGC+   TPIE N KL     + +IDREK+
Sbjct: 107 FLGMEFARSKEGIFVNQRKYILDLLKETGFLGCKAAETPIEVNLKLNPAKAEDVIDREKF 166

Query: 629 QCLVGRMIYLFHTKPDISYTISIVYQFMQTP 660
           Q LVG++IYL HT+PDI++ IS+V QFM +P
Sbjct: 167 QRLVGKLIYLSHTRPDIAFAISMVSQFMHSP 197

The following BLAST results are available for this feature:

BLAST of Cucsa.140490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
M810_ARATH	1.2e-11	33.85	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0...	[more]
COPIA_DROME	9.1e-07	24.81	Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3	[more]

BLAST of Cucsa.140490 vs. TrEMBL


Match Name	E-value	Identity	Description
A5AYJ3_VITVI	7.9e-42	32.52	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041073 PE=4 SV=1	[more]
A5AYJ3_VITVI	2.5e-35	51.23	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041073 PE=4 SV=1	[more]
A5C6A5_VITVI	3.8e-36	50.99	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042891 PE=4 SV=1	[more]
A0A0V0IZR1_SOLCH	1.3e-04	42.86	Putative ovule protein OS=Solanum chacoense PE=4 SV=1	[more]
A5AD36_VITVI	8.2e-23	44.59	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036095 PE=4 SV=1	[more]

BLAST of Cucsa.140490 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23160.1	3.4e-20	36.30	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	6.9e-13	33.85	ATMG00810.1 DNA/RNA polymerases superfamily protein	[more]

BLAST of Cucsa.140490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147819777\|emb\|CAN76196.1\|	1.1e-41	32.52	hypothetical protein VITISV_041073 [Vitis vinifera]	[more]
gi\|147819777\|emb\|CAN76196.1\|	3.5e-35	51.23	hypothetical protein VITISV_041073 [Vitis vinifera]	[more]
gi\|147792973\|emb\|CAN73102.1\|	5.5e-36	50.99	hypothetical protein VITISV_042891 [Vitis vinifera]	[more]
gi\|147786884\|emb\|CAN77807.1\|	1.2e-22	44.59	hypothetical protein VITISV_036095 [Vitis vinifera]	[more]
gi\|147852115\|emb\|CAN82268.1\|	6.3e-08	25.11	hypothetical protein VITISV_009286 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR013103	RVT_2
IPR025724	GAG-pre-integrase_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.140490.1	Cucsa.140490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 263..358 score: 2.
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 270..358 score: 4.1
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 511..609 score: 3.0
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 217..256 score: 6.
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 462..661 score: 3.3E-76coord: 162..422 score: 3.3
None	No IPR available	PANTHER	PTHR11439:SF185	SUBFAMILY NOT NAMED	coord: 462..661 score: 3.3E-76coord: 162..422 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.140490	Wax gourd	cgywgoB276
Cucsa.140490	Cucumber (Gy14) v1	cgycgyB090
Cucsa.140490	Cucurbita maxima (Rimu)	cgycmaB0392
Cucsa.140490	Cucurbita maxima (Rimu)	cgycmaB0393
Cucsa.140490	Cucurbita moschata (Rifu)	cgycmoB0390
Cucsa.140490	Cucurbita moschata (Rifu)	cgycmoB0391
Cucsa.140490	Cucurbita moschata (Rifu)	cgycmoB0392
Cucsa.140490	Wild cucumber (PI 183967)	cgycpiB206
Cucsa.140490	Wild cucumber (PI 183967)	cgycpiB207
Cucsa.140490	Cucumber (Chinese Long) v2	cgycuB203
Cucsa.140490	Cucumber (Chinese Long) v2	cgycuB204
Cucsa.140490	Melon (DHL92) v3.5.1	cgymeB234
Cucsa.140490	Melon (DHL92) v3.5.1	cgymeB235
Cucsa.140490	Watermelon (Charleston Gray)	cgywcgB238
Cucsa.140490	Watermelon (Charleston Gray)	cgywcgB239
Cucsa.140490	Watermelon (97103) v1	cgywmB248
Cucsa.140490	Watermelon (97103) v1	cgywmB246
Cucsa.140490	Watermelon (97103) v1	cgywmB249
Cucsa.140490	Cucurbita pepo (Zucchini)	cgycpeB0379
Cucsa.140490	Cucurbita pepo (Zucchini)	cgycpeB0380
Cucsa.140490	Cucurbita pepo (Zucchini)	cgycpeB0381
Cucsa.140490	Bottle gourd (USVL1VR-Ls)	cgylsiB225
Cucsa.140490	Bottle gourd (USVL1VR-Ls)	cgylsiB226
Cucsa.140490	Melon (DHL92) v3.6.1	cgymedB231
Cucsa.140490	Melon (DHL92) v3.6.1	cgymedB232
Cucsa.140490	Silver-seed gourd	carcgyB0275
Cucsa.140490	Silver-seed gourd	carcgyB0843
Cucsa.140490	Silver-seed gourd	carcgyB0884
Cucsa.140490	Cucumber (Chinese Long) v3	cgycucB211
Cucsa.140490	Cucumber (Chinese Long) v3	cgycucB212
Cucsa.140490	Watermelon (97103) v2	cgywmbB237
Cucsa.140490	Watermelon (97103) v2	cgywmbB238