Cucsa.130250 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.130250
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionMacrophage migration inhibitory factor like
Locationscaffold01029 : 181384 .. 182543 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTGCCTTTACATCTCCACCAATGTCAACTTGGCCGGAGTCGACTCCGCTCCCATCTTCTCCGCCACTACCACCGCCGTCTCCTCCATTATTGGCAAACCCGAAAATGTATAAACCTTTGCTTCTTAAAATACATACTTCTTTTCATTCTTTCTCTTGTCCTCTCATCCTAATGCATCCTACAGTCCACTTATCTTCTTCTACACTATTTAGTTGGTTAATTAAAGCTACATAAATCATTGTCTTTTTAGACAATTTTTTATAGACGAGAAGAAAAACTATTTATAAGATATAGCACAAAAAAAACTTATTTTTTTATAAAAATATTCCATTTTTTAAAAATATATTTTTCCTATTGTTGGATTTGTGCTTCGGAGCCAAACGCCTAATTATGGACAATGCAAAAGTTTAATTTAATGGAAACATTCCTAACCATTTCTTTTTTTGATAGAACGAAGTGAAATTTCACTTTTATTAACTCTATATCTTTATTTATGTAATCCATTAATTTCAAGTTTTGTACCTTCTGTAAAATCATTTTCCCTCCTGTTTATATTTTAGCGTACGTATTCGAATTTTAGTTTGGTTGAGAATGATATAATATCAAATTAACTCTTATGTTTGAGTTCAAATTTTTTGATTAATTAATAATTCGAGATTTTGGTATAGAGCAAGTGGTCAAAGTCCTGCAGTTTTATTTTCCTTTCAATTAAAATTGATTCACTTATTTGGTTTTGTTCATGTTTCCAATACATAAGTTGGAGTTCAAGTGGTGATTTAAGAGTTTTTTTAAAAAATCTCAATTTACTGTGATCCATCGTTTTGAGTTTGATTAGTGATTTAGTGCTCTTTTCATTACTTATGCCTGTAATTACCTTTCTCCTTTCTTTCTTCGACCGTCAAGTTGACAGTTTTTTTTTTGCCAACAGTATGTGATGGTGTTGCTGAATGGGTCGGTGCCGATATCGTTTGGAGGGAATGGGGATCCAGCAGCGTTTGCAGAGGTGGTGTCCATGGGAGGAATAAACTCAGAAGTGAAGAGGAGGTTGATCTCAACCCTCGGAAGCATTTTGAATGAAAAGCTTTCAGTTCCACCGGCGAGATTCTTCCTTAAAGTCCACGACACGACGGCTGGTCGCCCCATTTCCAAATTATGA

mRNA sequence

ATGCCTTGCCTTTACATCTCCACCAATGTCAACTTGGCCGGAGTCGACTCCGCTCCCATCTTCTCCGCCACTACCACCGCCGTCTCCTCCATTATTGGCAAACCCGAAAATTATGTGATGGTGTTGCTGAATGGGTCGGTGCCGATATCGTTTGGAGGGAATGGGGATCCAGCAGCGTTTGCAGAGGTGGTGTCCATGGGAGGAATAAACTCAGAAGTGAAGAGGAGGTTGATCTCAACCCTCGGAAGCATTTTGAATGAAAAGCTTTCAGTTCCACCGGCGAGATTCTTCCTTAAAGTCCACGACACGACGGCTGGTCGCCCCATTTCCAAATTATGA

Coding sequence (CDS)

ATGCCTTGCCTTTACATCTCCACCAATGTCAACTTGGCCGGAGTCGACTCCGCTCCCATCTTCTCCGCCACTACCACCGCCGTCTCCTCCATTATTGGCAAACCCGAAAATTATGTGATGGTGTTGCTGAATGGGTCGGTGCCGATATCGTTTGGAGGGAATGGGGATCCAGCAGCGTTTGCAGAGGTGGTGTCCATGGGAGGAATAAACTCAGAAGTGAAGAGGAGGTTGATCTCAACCCTCGGAAGCATTTTGAATGAAAAGCTTTCAGTTCCACCGGCGAGATTCTTCCTTAAAGTCCACGACACGACGGCTGGTCGCCCCATTTCCAAATTATGA

Protein sequence

MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAFAEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL*
Homology
[Close]
BLAST of Cucsa.130250 vs. Swiss-Prot
Match: MIFH_TRITR (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 35/102 (34.31%), Postives = 55/102 (53.92%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MP    STNV    + S     +T+  ++ ++GKPE+YV V +NG   I+FGG   PA F
Sbjct: 1   MPIFTFSTNVPSENI-SVDFLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGF 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHD 103
            +++S+GG+  E  R   + L   L + L +P  R ++   D
Sbjct: 61  GQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVD 101

[Close]
BLAST of Cucsa.130250 vs. Swiss-Prot
Match: MIFH_TRISP (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 4.4e-10
Identity = 36/98 (36.73%), Postives = 55/98 (56.12%), Query Frame = 1 

Query: 1  MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
          MP   ++TN+    V S    S+T+  V +I+ KP +YV V +N    +SFGG+  PAAF
Sbjct: 1  MPIFTLNTNIKATDVPS-DFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAAF 60

Query: 61 AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFL 99
            ++S+GGI     R   + L   LN+KL +P  R ++
Sbjct: 61 GTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYI 97

[Close]
BLAST of Cucsa.130250 vs. Swiss-Prot
Match: MIFH_BRUMA (Macrophage migration inhibitory factor homolog OS=Brugia malayi GN=Bm1_28435 PE=3 SV=4)

HSP 1 Score: 58.2 bits (139), Expect = 7.0e-08
Identity = 33/105 (31.43%), Postives = 55/105 (52.38%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MP   I TN+    + SA +  A+   V+  +GKPE+YV + +NG   + FGG+ DP A 
Sbjct: 1   MPYFTIDTNIPQNSISSAFLKKASNV-VAKALGKPESYVSIHVNGGQAMVFGGSEDPCAV 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTA 106
             + S+G +  +V       L  +L ++L +P  R +++  D  A
Sbjct: 61  CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEFVDIEA 104

[Close]
BLAST of Cucsa.130250 vs. Swiss-Prot
Match: MIFH_WUCBA (Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti GN=MIF PE=3 SV=3)

HSP 1 Score: 55.5 bits (132), Expect = 4.5e-07
Identity = 33/105 (31.43%), Postives = 52/105 (49.52%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MP   I TN     + SA +  A    V   +GKPE+YV + +NG  P+ FGG+ DP   
Sbjct: 1   MPYFTIDTNKPQDSISSAFLKKAPNV-VPKALGKPESYVSIHVNGGQPMVFGGSEDPCPV 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTA 106
             + S+G +  +V       L  +L ++L +P  R +++  D  A
Sbjct: 61  CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIESVDIEA 104

[Close]
BLAST of Cucsa.130250 vs. Swiss-Prot
Match: MIF_BOVIN (Macrophage migration inhibitory factor OS=Bos taurus GN=MIF PE=1 SV=6)

HSP 1 Score: 53.1 bits (126), Expect = 2.2e-06
Identity = 31/105 (29.52%), Postives = 49/105 (46.67%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MP   ++TNV  A V    + S  T  ++   GKP  Y+ V +     ++FGG+ +P A 
Sbjct: 1   MPMFVVNTNVPRASVPDG-LLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCAL 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTA 106
             + S+G I     R     L  +L E+L + P R ++   D  A
Sbjct: 61  CSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNA 104

[Close]
BLAST of Cucsa.130250 vs. TrEMBL
Match: A0A0A0L1F7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G314440 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.2e-54
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF
Sbjct: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 113
           AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]
BLAST of Cucsa.130250 vs. TrEMBL
Match: A0A061ERQ9_THECC (Tautomerase/MIF superfamily protein OS=Theobroma cacao GN=TCM_021591 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.5e-38
Identity = 83/112 (74.11%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MPCLYISTN+NL  VD+ PIFS TT AV+SIIGKPEN+VMV+L GSV ISF GN DPAA+
Sbjct: 1   MPCLYISTNLNLDEVDTGPIFSETTKAVASIIGKPENFVMVILKGSVAISFNGNKDPAAY 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 113
           AEVVSMGGIN EVKR+LI+TLG+IL   LS+P  RFFLKV+DTTAG  ISK+
Sbjct: 61  AEVVSMGGINREVKRKLIATLGTILENMLSIPRTRFFLKVYDTTAGLKISKI 112

[Close]
BLAST of Cucsa.130250 vs. TrEMBL
Match: A0A059A6Q7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02948 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-37
Identity = 79/112 (70.54%), Postives = 98/112 (87.50%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MPCLYISTNV L GVD+ PIFS  T AV+SIIG+PEN+VMV+L GS+ ISFGGN +PAA+
Sbjct: 1   MPCLYISTNVCLDGVDADPIFSEATKAVASIIGRPENFVMVILKGSLAISFGGNKEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 113
           AE++SMGGI+SEVK++LI+T+G+IL EKLS+P  RF LKV+DTTAGR +SKL
Sbjct: 61  AEIISMGGIDSEVKKKLIATIGTILQEKLSIPRTRFILKVYDTTAGRKVSKL 112

[Close]
BLAST of Cucsa.130250 vs. TrEMBL
Match: D7SR56_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0058g00590 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 6.5e-37
Identity = 81/112 (72.32%), Postives = 94/112 (83.93%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MPC+ ISTNVNL GVD+ PIFS  T AV+SIIGKPENYVMVLL GSV ISF GN +PAAF
Sbjct: 1   MPCVDISTNVNLEGVDADPIFSDVTKAVASIIGKPENYVMVLLKGSVAISFEGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 113
           AE++SMGGINSEVKR+LI+T+G+IL  KLS+P  RFFLKV+DTT    I+KL
Sbjct: 61  AEIISMGGINSEVKRKLIATIGTILQTKLSIPRTRFFLKVYDTTMAHKIAKL 112

[Close]
BLAST of Cucsa.130250 vs. TrEMBL
Match: B9SL17_RICCO (Light-inducible protein atls1, putative OS=Ricinus communis GN=RCOM_0848460 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-36
Identity = 79/107 (73.83%), Postives = 93/107 (86.92%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MPCLYISTNVNL GVD+ PIFS  T AV++IIGKPE++VMV+L GSV ISF GN +PAA+
Sbjct: 1   MPCLYISTNVNLDGVDTDPIFSEATKAVATIIGKPEHFVMVILKGSVGISFNGNKEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGR 108
           AEVVSMGGIN EVKR LISTLG++L  +LS+P ARFFLKV+DTTAG+
Sbjct: 61  AEVVSMGGINREVKRNLISTLGTVLENRLSIPRARFFLKVYDTTAGQ 107

[Close]
BLAST of Cucsa.130250 vs. TAIR10
Match: AT5G01650.2 (AT5G01650.2 Tautomerase/MIF superfamily protein)

HSP 1 Score: 131.7 bits (330), Expect = 2.8e-31
Identity = 61/103 (59.22%), Postives = 83/103 (80.58%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MPCL +STNVNL GVD++ I S  ++ V+ IIGKPENYVM++L GSVP+SFGG  DPAA+
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPENYVMIVLKGSVPMSFGGTEDPAAY 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDT 104
            E+VS+GG+N++V ++L + + +IL  KLSVP +RFFLK +DT
Sbjct: 61  GELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKFYDT 103

[Close]
BLAST of Cucsa.130250 vs. TAIR10
Match: AT3G51660.1 (AT3G51660.1 Tautomerase/MIF superfamily protein)

HSP 1 Score: 127.5 bits (319), Expect = 5.3e-30
Identity = 64/112 (57.14%), Postives = 82/112 (73.21%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MPCLYI+TNVN  GV++ P +S  T AV+SI+G+P+N VMV+L GSV I FGGN + AA+
Sbjct: 1   MPCLYITTNVNFDGVNTDPFYSEVTKAVASIVGRPQNLVMVVLKGSVEIVFGGNKEAAAY 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 113
           AE+VSMGGI  +VKR LI+T+GSIL+   S+ P RF  KV D  +    SKL
Sbjct: 61  AEIVSMGGITKQVKRELIATVGSILHTHFSIHPTRFIFKVFDINSLPLPSKL 112

[Close]
BLAST of Cucsa.130250 vs. TAIR10
Match: AT5G57170.2 (AT5G57170.2 Tautomerase/MIF superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 5.8e-21
Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MP L + TN+ +  V  + I    T AV+ IIGKPE+YVM+LLN  VPI+F G  +PAA+
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPESYVMILLNSGVPIAFAGTEEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 113
            E++S+GG+   V  +L  T+  IL  KLS+  +RF++K +D+    P+S L
Sbjct: 61  GELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFYIKFYDS----PVSPL 108

[Close]
BLAST of Cucsa.130250 vs. NCBI nr
Match: gi|449461739|ref|XP_004148599.1| (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-54
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF
Sbjct: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 113
           AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]
BLAST of Cucsa.130250 vs. NCBI nr
Match: gi|659128505|ref|XP_008464238.1| (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo])

HSP 1 Score: 215.7 bits (548), Expect = 4.2e-53
Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MPCLYISTNVNLAGVDSA IFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPA F
Sbjct: 1   MPCLYISTNVNLAGVDSAAIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAVF 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 113
           AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]
BLAST of Cucsa.130250 vs. NCBI nr
Match: gi|1009158693|ref|XP_015897419.1| (PREDICTED: macrophage migration inhibitory factor homolog [Ziziphus jujuba])

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-38
Identity = 86/112 (76.79%), Postives = 96/112 (85.71%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MPCLYISTNVNL GVD+  IFS  T AVS+IIGKPEN+VMV+LNGSV ISFGGN DPAA+
Sbjct: 1   MPCLYISTNVNLDGVDTDSIFSEATKAVSTIIGKPENFVMVILNGSVAISFGGNKDPAAY 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 113
           AE+VSMGGINS VK+ LI+TLG+IL+ KLSVP  RFFLKV DTTAGR  SKL
Sbjct: 61  AEIVSMGGINSAVKKDLIATLGTILHAKLSVPRTRFFLKVFDTTAGRTNSKL 112

[Close]
BLAST of Cucsa.130250 vs. NCBI nr
Match: gi|590627852|ref|XP_007026560.1| (Tautomerase/MIF superfamily protein [Theobroma cacao])

HSP 1 Score: 165.2 bits (417), Expect = 6.5e-38
Identity = 83/112 (74.11%), Postives = 95/112 (84.82%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MPCLYISTN+NL  VD+ PIFS TT AV+SIIGKPEN+VMV+L GSV ISF GN DPAA+
Sbjct: 1   MPCLYISTNLNLDEVDTGPIFSETTKAVASIIGKPENFVMVILKGSVAISFNGNKDPAAY 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 113
           AEVVSMGGIN EVKR+LI+TLG+IL   LS+P  RFFLKV+DTTAG  ISK+
Sbjct: 61  AEVVSMGGINREVKRKLIATLGTILENMLSIPRTRFFLKVYDTTAGLKISKI 112

[Close]
BLAST of Cucsa.130250 vs. NCBI nr
Match: gi|702498295|ref|XP_010037667.1| (PREDICTED: macrophage migration inhibitory factor homolog [Eucalyptus grandis])

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-37
Identity = 79/112 (70.54%), Postives = 98/112 (87.50%), Query Frame = 1 

Query: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60
           MPCLYISTNV L GVD+ PIFS  T AV+SIIG+PEN+VMV+L GS+ ISFGGN +PAA+
Sbjct: 1   MPCLYISTNVCLDGVDADPIFSEATKAVASIIGRPENFVMVILKGSLAISFGGNKEPAAY 60

Query: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 113
           AE++SMGGI+SEVK++LI+T+G+IL EKLS+P  RF LKV+DTTAGR +SKL
Sbjct: 61  AEIISMGGIDSEVKKKLIATIGTILQEKLSIPRTRFILKVYDTTAGRKVSKL 112

The following BLAST results are available for this feature:
BLAST of Cucsa.130250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MIFH_TRITR1.1e-1034.31Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2[more]
MIFH_TRISP4.4e-1036.73Macrophage migration inhibitory factor homolog OS=Trichinella spiralis PE=1 SV=2[more]
MIFH_BRUMA7.0e-0831.43Macrophage migration inhibitory factor homolog OS=Brugia malayi GN=Bm1_28435 PE=... [more]
MIFH_WUCBA4.5e-0731.43Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti GN=MIF PE... [more]
MIF_BOVIN2.2e-0629.52Macrophage migration inhibitory factor OS=Bos taurus GN=MIF PE=1 SV=6[more]
BLAST of Cucsa.130250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1F7_CUCSA1.2e-54100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G314440 PE=4 SV=1[more]
A0A061ERQ9_THECC4.5e-3874.11Tautomerase/MIF superfamily protein OS=Theobroma cacao GN=TCM_021591 PE=4 SV=1[more]
A0A059A6Q7_EUCGR1.0e-3770.54Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02948 PE=4 SV=1[more]
D7SR56_VITVI6.5e-3772.32Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0058g00590 PE=4 SV=... [more]
B9SL17_RICCO1.4e-3673.83Light-inducible protein atls1, putative OS=Ricinus communis GN=RCOM_0848460 PE=4... [more]
BLAST of Cucsa.130250 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G01650.22.8e-3159.22 Tautomerase/MIF superfamily protein[more]
AT3G51660.15.3e-3057.14 Tautomerase/MIF superfamily protein[more]
AT5G57170.25.8e-2143.75 Tautomerase/MIF superfamily protein[more]
BLAST of Cucsa.130250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461739|ref|XP_004148599.1|1.7e-54100.00PREDICTED: macrophage migration inhibitory factor homolog [Cucumis sativus][more]
gi|659128505|ref|XP_008464238.1|4.2e-5398.21PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo][more]
gi|1009158693|ref|XP_015897419.1|1.7e-3876.79PREDICTED: macrophage migration inhibitory factor homolog [Ziziphus jujuba][more]
gi|590627852|ref|XP_007026560.1|6.5e-3874.11Tautomerase/MIF superfamily protein [Theobroma cacao][more]
gi|702498295|ref|XP_010037667.1|1.4e-3770.54PREDICTED: macrophage migration inhibitory factor homolog [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001398Macrophage_inhib_fac
IPR014347Tautomerase/MIF_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0006558 L-phenylalanine metabolic process
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0006570 tyrosine metabolic process
cellular_component GO:0005777 peroxisome
molecular_function GO:0050178 phenylpyruvate tautomerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.130250.1Cucsa.130250.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001398Macrophage migration inhibitory factorPRODOMPD004816coord: 20..103
score: 9.0
IPR001398Macrophage migration inhibitory factorPANTHERPTHR11954MACROPHAGE MIGRATION INHIBITORY FACTOR RELATEDcoord: 2..105
score: 2.3
IPR001398Macrophage migration inhibitory factorPFAMPF01187MIFcoord: 2..104
score: 4.2
IPR014347Tautomerase/MIF superfamilyunknownSSF55331Tautomerase/MIFcoord: 1..104
score: 2.91
NoneNo IPR availableGENE3DG3DSA:3.30.429.10coord: 1..104
score: 2.2
NoneNo IPR availablePANTHERPTHR11954:SF25LS1-LIKE PROTEINcoord: 2..105
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.130250Silver-seed gourdcarcgyB0190
Cucsa.130250Silver-seed gourdcarcgyB0306
Cucsa.130250Silver-seed gourdcarcgyB0331
Cucsa.130250Silver-seed gourdcarcgyB0633
Cucsa.130250Silver-seed gourdcarcgyB1114
Cucsa.130250Cucumber (Chinese Long) v3cgycucB185
Cucsa.130250Cucumber (Chinese Long) v3cgycucB186
Cucsa.130250Cucumber (Chinese Long) v3cgycucB184
Cucsa.130250Cucumber (Chinese Long) v3cgycucB187
Cucsa.130250Watermelon (97103) v2cgywmbB209
Cucsa.130250Watermelon (97103) v2cgywmbB210
Cucsa.130250Watermelon (97103) v2cgywmbB211
Cucsa.130250Wax gourdcgywgoB246
Cucsa.130250Wax gourdcgywgoB247
Cucsa.130250Wax gourdcgywgoB248
Cucsa.130250Cucumber (Gy14) v1cgycgyB078
Cucsa.130250Cucurbita maxima (Rimu)cgycmaB0356
Cucsa.130250Cucurbita maxima (Rimu)cgycmaB0357
Cucsa.130250Cucurbita maxima (Rimu)cgycmaB0353
Cucsa.130250Cucurbita maxima (Rimu)cgycmaB0354
Cucsa.130250Cucurbita moschata (Rifu)cgycmoB0352
Cucsa.130250Cucurbita moschata (Rifu)cgycmoB0347
Cucsa.130250Cucurbita moschata (Rifu)cgycmoB0348
Cucsa.130250Cucurbita moschata (Rifu)cgycmoB0349
Cucsa.130250Cucurbita moschata (Rifu)cgycmoB0350
Cucsa.130250Cucurbita moschata (Rifu)cgycmoB0351
Cucsa.130250Wild cucumber (PI 183967)cgycpiB182
Cucsa.130250Wild cucumber (PI 183967)cgycpiB183
Cucsa.130250Wild cucumber (PI 183967)cgycpiB184
Cucsa.130250Cucumber (Chinese Long) v2cgycuB179
Cucsa.130250Cucumber (Chinese Long) v2cgycuB180
Cucsa.130250Cucumber (Chinese Long) v2cgycuB181
Cucsa.130250Melon (DHL92) v3.5.1cgymeB209
Cucsa.130250Melon (DHL92) v3.5.1cgymeB210
Cucsa.130250Watermelon (Charleston Gray)cgywcgB212
Cucsa.130250Watermelon (Charleston Gray)cgywcgB213
Cucsa.130250Watermelon (Charleston Gray)cgywcgB214
Cucsa.130250Watermelon (97103) v1cgywmB217
Cucsa.130250Watermelon (97103) v1cgywmB218
Cucsa.130250Cucurbita pepo (Zucchini)cgycpeB0343
Cucsa.130250Cucurbita pepo (Zucchini)cgycpeB0344
Cucsa.130250Cucurbita pepo (Zucchini)cgycpeB0345
Cucsa.130250Cucurbita pepo (Zucchini)cgycpeB0347
Cucsa.130250Cucurbita pepo (Zucchini)cgycpeB0348
Cucsa.130250Bottle gourd (USVL1VR-Ls)cgylsiB202
Cucsa.130250Bottle gourd (USVL1VR-Ls)cgylsiB203
Cucsa.130250Bottle gourd (USVL1VR-Ls)cgylsiB204
Cucsa.130250Melon (DHL92) v3.6.1cgymedB206
Cucsa.130250Melon (DHL92) v3.6.1cgymedB207