Cucsa.126990 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.126990
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	D-tyrosyl-tRNA(Tyr) deacylase
Location	scaffold01017 : 800950 .. 801972 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGCTGTTGTCCAGCGAGTCGCCTCTGCAAGCGTCCAGGTCTCCTCTCTCTCTCTCTTTTCCTCTCTTAATGCTTTTCTAAATCGCCGGTGTGAGATACTGCATTTCACAGGTCGATGGCCGCACCGTTTCAGAGATCGGCCCAGGTCTCCTCGTGCTCGTCGGCCTTCACGACTCCGACTCCGACACCGACGCTGAATACATGTAATCTACTCAACCATCTCTCACCCCTCCCTCTCTTTTCTATACTGATTCCATCCGGCATTAAAACTTCTTTTCAAATTGGGTTTCAGATGCCGTAAGGTCCTAAATATGAGGTTGTTCCCAAATGAGAGTACCGGCAAAGCTTGGGACTTAAACGTAATTTAATTATACAAACACTCCTTGCCTCCTTATTCCGAATTAAACAAAAGCTTCAGGATTTGCTTTACTACTTTCCTTGATATTTCTTCCAGGTGATGCAGAAAAACTACGAGGTTCTATTAGGTAAGTGAAAAAAGGTTTGGGCTTTGCTTCGAAGTTTGTACCTAGAATGTGAATTGGAGTTAATCCACTAATTAACTTATACTTGGTGGATTGCAACCAGTCAGCCAGTTTACACTGTACGGAATGTTGAAGGGGAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCTAAACCTTTTTACGCTTCTGTGGTCGAGAGGTTCGGTAAATCCTACAACCCAGATGCGATAAAAGGTAACCTATCTTTCCTAATATGAAATTCAGTCAATATGCTAAATAGGAACGGGTTCAACCAGTAGTATAAAGAGTTTACTGAATCTTGTCTTTGTTCCCTTTTCCTGTGGGTAGATGGAGTGTTTGGAGCAATGATGAAGGTAATCTCACTATGCTCAGTTTTGGATTCCGAGTAACTCTGATATTTACTAGAGTATACAGTTTTGATGTTTTGGGCACTGATGTTTGAGAAGGTCAATTTGGTGAATGATGGCCCAGTCACAATGCAGATTGACTCCCAACCGTCTAAGTAA

mRNA sequence

ATGAGAGCTGTTGTCCAGCGAGTCGCCTCTGCAAGCGTCCAGGTCGATGGCCGCACCGTTTCAGAGATCGGCCCAGGTCTCCTCGTGCTCGTCGGCCTTCACGACTCCGACTCCGACACCGACGCTGAATACATATGCCGTAAGGTCCTAAATATGAGGTTGTTCCCAAATGAGAGTACCGGCAAAGCTTGGGACTTAAACGTGATGCAGAAAAACTACGAGGTTCTATTAGTCAGCCAGTTTACACTGTACGGAATGTTGAAGGGGAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCTAAACCTTTTTACGCTTCTGTGGTCGAGAGGTTCGGTAAATCCTACAACCCAGATGCGATAAAAGATGGAGTGTTTGGAGCAATGATGAAGGTCAATTTGGTGAATGATGGCCCAGTCACAATGCAGATTGACTCCCAACCGTCTAAGTAA

Coding sequence (CDS)

ATGAGAGCTGTTGTCCAGCGAGTCGCCTCTGCAAGCGTCCAGGTCGATGGCCGCACCGTTTCAGAGATCGGCCCAGGTCTCCTCGTGCTCGTCGGCCTTCACGACTCCGACTCCGACACCGACGCTGAATACATATGCCGTAAGGTCCTAAATATGAGGTTGTTCCCAAATGAGAGTACCGGCAAAGCTTGGGACTTAAACGTGATGCAGAAAAACTACGAGGTTCTATTAGTCAGCCAGTTTACACTGTACGGAATGTTGAAGGGGAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCTAAACCTTTTTACGCTTCTGTGGTCGAGAGGTTCGGTAAATCCTACAACCCAGATGCGATAAAAGATGGAGTGTTTGGAGCAATGATGAAGGTCAATTTGGTGAATGATGGCCCAGTCACAATGCAGATTGACTCCCAACCGTCTAAGTAA

Protein sequence

MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK*

Homology

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BLAST of Cucsa.126990 vs. Swiss-Prot
Match: DTD_DICDI (D-tyrosyl-tRNA(Tyr) deacylase OS=Dictyostelium discoideum GN=dtd PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-42
Identity = 82/149 (55.03%), Postives = 109/149 (73.15%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           M+A++QRV S+SV V+G  +SEI  GL+ L+G+   D+  DAEYI RK+LN+RL+ NE  
Sbjct: 1   MKAIIQRVKSSSVTVEGEVISEIKQGLMCLIGIGRDDTKEDAEYITRKILNLRLWKNEDG 60

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
            K WD +V Q +YE+L VSQFTL+  LKGNK  +H+AM P+ +K FY   +E   KSY P
Sbjct: 61  TKNWDRSVQQMDYEILFVSQFTLFAQLKGNKQSYHLAMAPELSKQFYLDFLENAKKSYKP 120

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQ 150
           + IKDG FGAMM V L+NDGPVT+Q+DS+
Sbjct: 121 EKIKDGRFGAMMDVQLINDGPVTIQLDSK 149

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BLAST of Cucsa.126990 vs. Swiss-Prot
Match: DTD1_MOUSE (D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Mus musculus GN=Dtd1 PE=1 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 3.2e-40
Identity = 82/148 (55.41%), Postives = 111/148 (75.00%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   DS  + E++ RK+LN+R+F +ES 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISMEDSQKELEHMVRKILNLRVFEDES- 60

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           GK W  +VM K YEVL VSQFTL  +LKGNKPDFH+AMP ++A+ FY S +E+  KSY P
Sbjct: 61  GKHWSKSVMDKEYEVLCVSQFTLQCVLKGNKPDFHLAMPTEQAESFYNSFLEQLRKSYRP 120

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDS 149
           + I+DG FGA M+V++ NDGPVT++++S
Sbjct: 121 ELIRDGKFGAYMQVHIQNDGPVTIELES 147

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BLAST of Cucsa.126990 vs. Swiss-Prot
Match: DTD1_HUMAN (D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Homo sapiens GN=DTD1 PE=1 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-39
Identity = 80/148 (54.05%), Postives = 111/148 (75.00%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   D+  + E++ RK+LN+R+F +ES 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES- 60

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           GK W  +VM K YE+L VSQFTL  +LKGNKPDFH+AMP ++A+ FY S +E+  K+Y P
Sbjct: 61  GKHWSKSVMDKQYEILCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRP 120

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDS 149
           + IKDG FGA M+V++ NDGPVT++++S
Sbjct: 121 ELIKDGKFGAYMQVHIQNDGPVTIELES 147

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BLAST of Cucsa.126990 vs. Swiss-Prot
Match: DTD1_BOVIN (D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Bos taurus GN=DTD1 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.7e-39
Identity = 79/148 (53.38%), Postives = 110/148 (74.32%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   D+  + E++ RK+LN+R+F +ES 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES- 60

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           GK W  +VM K YEVL VSQFTL  +LKGNKPDFH+AMP ++A+ FY   +E+  K+Y P
Sbjct: 61  GKHWSKSVMDKQYEVLCVSQFTLQCVLKGNKPDFHLAMPAEQAESFYKGFLEQLRKAYRP 120

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDS 149
           + +KDG FGA M+V++ NDGPVT++++S
Sbjct: 121 ELVKDGKFGAYMQVHIQNDGPVTIELES 147

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BLAST of Cucsa.126990 vs. Swiss-Prot
Match: DTD_THEM4 (D-aminoacyl-tRNA deacylase OS=Thermosipho melanesiensis (strain DSM 12029 / CIP 104789 / BI429) GN=dtd PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-29
Identity = 70/150 (46.67%), Postives = 107/150 (71.33%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           MRAVVQRV SA+V V+G+ + +I  GLLVL+G+  +D+++DAEY+  K+LN+R+F +++ 
Sbjct: 1   MRAVVQRVNSANVDVNGKIIGKIKKGLLVLLGVGKNDTESDAEYLVNKILNLRIF-DDNK 60

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYG-MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYN 120
           GK  +L+++    ++L+VSQFTLYG   +G +P +  +  P++AK  Y   VE+  K YN
Sbjct: 61  GK-MNLSLLDIKGDILIVSQFTLYGDCRRGRRPSYSDSASPEKAKKLYEYFVEKIRKEYN 120

Query: 121 PDAIKDGVFGAMMKVNLVNDGPVTMQIDSQ 150
              ++ G FGA MKVNL NDGPVT+ +DS+
Sbjct: 121 -IKVETGEFGAYMKVNLENDGPVTLLLDSK 147

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BLAST of Cucsa.126990 vs. TrEMBL
Match: A0A0A0LS01_CUCSA (D-tyrosyl-tRNA(Tyr) deacylase OS=Cucumis sativus GN=Csa_1G076620 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.7e-80
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST
Sbjct: 35  MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 94

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP
Sbjct: 95  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 154

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 153
           DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK
Sbjct: 155 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 186

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BLAST of Cucsa.126990 vs. TrEMBL
Match: V4W8Y4_9ROSI (D-tyrosyl-tRNA(Tyr) deacylase OS=Citrus clementina GN=CICLE_v10016962mg PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 6.7e-69
Identity = 128/151 (84.77%), Postives = 142/151 (94.04%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           MRAVVQRVASASV+V+GR VSEIGPGLLVLVGLH+SD+D DA+Y+CRKVLNMRLFPNE+T
Sbjct: 1   MRAVVQRVASASVEVEGRLVSEIGPGLLVLVGLHESDTDADADYVCRKVLNMRLFPNENT 60

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           GK WDLNVMQK Y VLLVSQFTLYG+LKGNKPDFHVAMPPQ+AKPFY S+V++F KSYNP
Sbjct: 61  GKGWDLNVMQKKYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYGSLVDKFRKSYNP 120

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPS 152
           DAIKDGVFGA+MKVNLVNDGPVTMQ+DS  S
Sbjct: 121 DAIKDGVFGALMKVNLVNDGPVTMQLDSSQS 151

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BLAST of Cucsa.126990 vs. TrEMBL
Match: A0A059C8H7_EUCGR (D-tyrosyl-tRNA(Tyr) deacylase OS=Eucalyptus grandis GN=EUGRSUZ_E03165 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-68
Identity = 128/151 (84.77%), Postives = 143/151 (94.70%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           MRAVVQRVASASV+V+GRTVSEIGPGLLVLVG+HDSD+D+DA+YICRKVLNMRLF NEST
Sbjct: 35  MRAVVQRVASASVEVEGRTVSEIGPGLLVLVGIHDSDTDSDADYICRKVLNMRLFTNEST 94

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           G+ WD NVMQKNY VLLVSQFTLYG+LKGNKPDFHVAMPPQ+AKPFY S+VERF K+Y+P
Sbjct: 95  GRGWDQNVMQKNYGVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYESLVERFRKTYSP 154

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPS 152
           DA+KDG+FGAMMKVNLVNDGPVTMQ+DS  S
Sbjct: 155 DAVKDGIFGAMMKVNLVNDGPVTMQLDSLQS 185

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BLAST of Cucsa.126990 vs. TrEMBL
Match: M5X2N3_PRUPE (D-tyrosyl-tRNA(Tyr) deacylase OS=Prunus persica GN=PRUPE_ppa012098mg PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-68
Identity = 129/152 (84.87%), Postives = 142/152 (93.42%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           MRAVVQRVASASV+V+GRTVSEIGPGLLVLVGLH+SDS++DA+YICRKVLNMRLFPNES+
Sbjct: 32  MRAVVQRVASASVEVEGRTVSEIGPGLLVLVGLHESDSNSDADYICRKVLNMRLFPNESS 91

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           G+ WD NVM +NYEVLLVSQFTLYG+LKGNKPDFHVAMPPQ AKPFYAS+V+ F  SY P
Sbjct: 92  GRGWDQNVMHRNYEVLLVSQFTLYGVLKGNKPDFHVAMPPQNAKPFYASLVDSFRNSYKP 151

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 153
           DA+KDGVFGAMMKVNLVNDGPVTMQIDSQ  K
Sbjct: 152 DAVKDGVFGAMMKVNLVNDGPVTMQIDSQSPK 183

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BLAST of Cucsa.126990 vs. TrEMBL
Match: A0A0B2QCE4_GLYSO (D-tyrosyl-tRNA(Tyr) deacylase OS=Glycine soja GN=glysoja_036114 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.9e-68
Identity = 130/152 (85.53%), Postives = 141/152 (92.76%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           MRAVVQRVASASV+V+GR VSEIGPGLLVLVG+HDSDSD DA+YICRKVLNMRLFPNE+T
Sbjct: 46  MRAVVQRVASASVEVEGRIVSEIGPGLLVLVGIHDSDSDADADYICRKVLNMRLFPNENT 105

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           GKAWD +VMQKNY+VLLVSQFTLYG LKGNKPDFHVAM PQRAKPFYAS+V+RF  +YN 
Sbjct: 106 GKAWDHSVMQKNYQVLLVSQFTLYGFLKGNKPDFHVAMAPQRAKPFYASLVDRFRNAYNS 165

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 153
           DAIKDGVFGAMMKVNLVNDGPVTMQ+DS   K
Sbjct: 166 DAIKDGVFGAMMKVNLVNDGPVTMQLDSNSPK 197

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BLAST of Cucsa.126990 vs. TAIR10
Match: AT4G18460.1 (AT4G18460.1 D-Tyr-tRNA(Tyr) deacylase family protein)

HSP 1 Score: 257.7 bits (657), Expect = 4.6e-69
Identity = 121/151 (80.13%), Postives = 140/151 (92.72%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           MRAV+QRV+S+SV VDGR VSEIGPGLLVL+G+H+SD+++DA+YICRKVLNMRLF NE+T
Sbjct: 1   MRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTESDADYICRKVLNMRLFSNETT 60

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           GK WD NVMQ+NY VLLVSQFTLYG LKGNKPDFHVAMPP +AKPFYAS+VE+F K+YNP
Sbjct: 61  GKGWDQNVMQRNYGVLLVSQFTLYGFLKGNKPDFHVAMPPDKAKPFYASLVEKFQKAYNP 120

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPS 152
           DA+KDGVFGAMM+VNLVNDGPVTMQ+DS  S
Sbjct: 121 DAVKDGVFGAMMQVNLVNDGPVTMQLDSPQS 151

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BLAST of Cucsa.126990 vs. NCBI nr
Match: gi|778658839|ref|XP_004148783.2| (PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase isoform X2 [Cucumis sativus])

HSP 1 Score: 306.6 bits (784), Expect = 2.4e-80
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST
Sbjct: 35  MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 94

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP
Sbjct: 95  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 154

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 153
           DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK
Sbjct: 155 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 186

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BLAST of Cucsa.126990 vs. NCBI nr
Match: gi|778658836|ref|XP_011653368.1| (PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase isoform X1 [Cucumis sativus])

HSP 1 Score: 306.6 bits (784), Expect = 2.4e-80
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST
Sbjct: 35  MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 94

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP
Sbjct: 95  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 154

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 153
           DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK
Sbjct: 155 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 186

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BLAST of Cucsa.126990 vs. NCBI nr
Match: gi|659068130|ref|XP_008442903.1| (PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase isoform X1 [Cucumis melo])

HSP 1 Score: 303.1 bits (775), Expect = 2.7e-79
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLH+SDSD DAEYICRKVLNMRLFPNEST
Sbjct: 36  MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHESDSDADAEYICRKVLNMRLFPNEST 95

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP
Sbjct: 96  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 155

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 153
           DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK
Sbjct: 156 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 187

[Close]

BLAST of Cucsa.126990 vs. NCBI nr
Match: gi|659068132|ref|XP_008442911.1| (PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase isoform X2 [Cucumis melo])

HSP 1 Score: 303.1 bits (775), Expect = 2.7e-79
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLH+SDSD DAEYICRKVLNMRLFPNEST
Sbjct: 36  MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHESDSDADAEYICRKVLNMRLFPNEST 95

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP
Sbjct: 96  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 155

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 153
           DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK
Sbjct: 156 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 187

[Close]

BLAST of Cucsa.126990 vs. NCBI nr
Match: gi|694323516|ref|XP_009352823.1| (PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase [Pyrus x bretschneideri])

HSP 1 Score: 272.3 bits (695), Expect = 5.1e-70
Identity = 133/152 (87.50%), Postives = 142/152 (93.42%), Query Frame = 1


Query: 1   MRAVVQRVASASVQVDGRTVSEIGPGLLVLVGLHDSDSDTDAEYICRKVLNMRLFPNEST 60
           MRAVVQRVASASV+V+GR VSEIGPGLLVLVGLHDSDS +DA+YICRKVLNMRLFPNEST
Sbjct: 33  MRAVVQRVASASVEVEGRIVSEIGPGLLVLVGLHDSDSTSDADYICRKVLNMRLFPNEST 92

Query: 61  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNP 120
           G+ WD NVMQ+NYEVLLVSQFTLYG+LKGNKPDFHVAMPPQ+AKPFYASVVE F  SY P
Sbjct: 93  GRGWDQNVMQRNYEVLLVSQFTLYGILKGNKPDFHVAMPPQKAKPFYASVVESFRNSYKP 152

Query: 121 DAIKDGVFGAMMKVNLVNDGPVTMQIDSQPSK 153
           DA+KDGVFGAMMKVNLVNDGPVTMQIDSQ  K
Sbjct: 153 DAVKDGVFGAMMKVNLVNDGPVTMQIDSQSPK 184

The following BLAST results are available for this feature:

BLAST of Cucsa.126990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DTD_DICDI	1.5e-42	55.03	D-tyrosyl-tRNA(Tyr) deacylase OS=Dictyostelium discoideum GN=dtd PE=3 SV=1	[more]
DTD1_MOUSE	3.2e-40	55.41	D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Mus musculus GN=Dtd1 PE=1 SV=2	[more]
DTD1_HUMAN	1.6e-39	54.05	D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Homo sapiens GN=DTD1 PE=1 SV=2	[more]
DTD1_BOVIN	2.7e-39	53.38	D-tyrosyl-tRNA(Tyr) deacylase 1 OS=Bos taurus GN=DTD1 PE=2 SV=1	[more]
DTD_THEM4	2.0e-29	46.67	D-aminoacyl-tRNA deacylase OS=Thermosipho melanesiensis (strain DSM 12029 / CIP ...	[more]

BLAST of Cucsa.126990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS01_CUCSA	1.7e-80	100.00	D-tyrosyl-tRNA(Tyr) deacylase OS=Cucumis sativus GN=Csa_1G076620 PE=3 SV=1	[more]
V4W8Y4_9ROSI	6.7e-69	84.77	D-tyrosyl-tRNA(Tyr) deacylase OS=Citrus clementina GN=CICLE_v10016962mg PE=3 SV=...	[more]
A0A059C8H7_EUCGR	1.1e-68	84.77	D-tyrosyl-tRNA(Tyr) deacylase OS=Eucalyptus grandis GN=EUGRSUZ_E03165 PE=3 SV=1	[more]
M5X2N3_PRUPE	1.1e-68	84.87	D-tyrosyl-tRNA(Tyr) deacylase OS=Prunus persica GN=PRUPE_ppa012098mg PE=3 SV=1	[more]
A0A0B2QCE4_GLYSO	1.9e-68	85.53	D-tyrosyl-tRNA(Tyr) deacylase OS=Glycine soja GN=glysoja_036114 PE=3 SV=1	[more]

BLAST of Cucsa.126990 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G18460.1	4.6e-69	80.13	D-Tyr-tRNA(Tyr) deacylase family protein	[more]

BLAST of Cucsa.126990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778658839\|ref\|XP_004148783.2\|	2.4e-80	100.00	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase isoform X2 [Cucumis sativus]	[more]
gi\|778658836\|ref\|XP_011653368.1\|	2.4e-80	100.00	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase isoform X1 [Cucumis sativus]	[more]
gi\|659068130\|ref\|XP_008442903.1\|	2.7e-79	98.68	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase isoform X1 [Cucumis melo]	[more]
gi\|659068132\|ref\|XP_008442911.1\|	2.7e-79	98.68	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase isoform X2 [Cucumis melo]	[more]
gi\|694323516\|ref\|XP_009352823.1\|	5.1e-70	87.50	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003732	Daa-tRNA_deacyls_DTD
IPR023509	DTD-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0016788	hydrolase activity, acting on ester bonds

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0019478	D-amino acid catabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019478	D-amino acid catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds
molecular_function	GO:0002161	aminoacyl-tRNA editing activity
molecular_function	GO:0051499	D-aminoacyl-tRNA deacylase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.126990.1	Cucsa.126990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003732	D-aminoacyl-tRNA deacylase DTD	HAMAP	MF_00518	Deacylase_Dtd	coord: 1..148 score: 27
IPR003732	D-aminoacyl-tRNA deacylase DTD	PANTHER	PTHR10472	D-TYROSYL-TRNA TYR DEACYLASE	coord: 2..149 score: 4.3
IPR003732	D-aminoacyl-tRNA deacylase DTD	PFAM	PF02580	Tyr_Deacylase	coord: 2..147 score: 1.5
IPR003732	D-aminoacyl-tRNA deacylase DTD	TIGRFAMs	TIGR00256	TIGR00256	coord: 1..148 score: 1.9
IPR023509	D-Tyr tRNAtyr deacylase-like domain	GENE3D	G3DSA:3.50.80.10		coord: 1..149 score: 1.2
IPR023509	D-Tyr tRNAtyr deacylase-like domain	unknown	SSF69500	DTD-like	coord: 1..148 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.126990	Cla019689	Watermelon (97103) v1	cgywmB207
Cucsa.126990	Csa1G076620	Cucumber (Chinese Long) v2	cgycuB170
Cucsa.126990	MELO3C002631	Melon (DHL92) v3.5.1	cgymeB198
Cucsa.126990	ClCG03G007950	Watermelon (Charleston Gray)	cgywcgB205
Cucsa.126990	CSPI01G12440	Wild cucumber (PI 183967)	cgycpiB172
Cucsa.126990	CmaCh13G006190	Cucurbita maxima (Rimu)	cgycmaB0336
Cucsa.126990	CmaCh18G003950	Cucurbita maxima (Rimu)	cgycmaB0338
Cucsa.126990	CmoCh18G003770	Cucurbita moschata (Rifu)	cgycmoB0332
Cucsa.126990	CmoCh13G006410	Cucurbita moschata (Rifu)	cgycmoB0330
Cucsa.126990	Lsi02G007860	Bottle gourd (USVL1VR-Ls)	cgylsiB194
Cucsa.126990	Cp4.1LG09g08170	Cucurbita pepo (Zucchini)	cgycpeB0324
Cucsa.126990	Cp4.1LG20g04600	Cucurbita pepo (Zucchini)	cgycpeB0328
Cucsa.126990	MELO3C002631.2	Melon (DHL92) v3.6.1	cgymedB197
Cucsa.126990	CsaV3_1G012640	Cucumber (Chinese Long) v3	cgycucB174
Cucsa.126990	Cla97C03G059210	Watermelon (97103) v2	cgywmbB202
Cucsa.126990	Bhi08G001855	Wax gourd	cgywgoB235
Cucsa.126990	Carg14602	Silver-seed gourd	carcgyB0182
Cucsa.126990	Carg21522	Silver-seed gourd	carcgyB1068

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.126990	Cucurbita moschata (Rifu)	cgycmoB0329
Cucsa.126990	Cucurbita pepo (Zucchini)	cgycpeB0330
Cucsa.126990	Watermelon (97103) v2	cgywmbB199